Lsi08G012720 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi08G012720
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionGlutamate receptor
Locationchr08 : 21131435 .. 21131740 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGGAGAAGAAAGGGTTTGGGAGGTGGTTTTGGGGTGTTGGTGGTCGTTATCTTCCTTAACATATTATTGGCGGTGGCGGAGATGGCGGAGGAGAAGGAGGCGGCTGCGGCTGCGGCGGTGAAAGTGAAGGTGGGTGTGGTTTTGGATTTGAATGTTTTTGTTGGGAAGATGGGTCTGAGTTGCATTTCGATGGCTCTCGCTGATTTCTATGCTTCTCGGGGATATTATAAGACCAGACTGATCCTTAACCCCATTGATTCCAATGGCACTGTTCTTCGTGCAGCTGCTGCAGGTTCTCTATAA

mRNA sequence

ATGAGGAGAAGAAAGGGTTTGGGAGGTGGTTTTGGGGTGTTGGTGGTCGTTATCTTCCTTAACATATTATTGGCGGTGGCGGAGATGGCGGAGGAGAAGGAGGCGGCTGCGGCTGCGGCGGTGAAAGTGAAGGTGGGTGTGGTTTTGGATTTGAATGTTTTTGTTGGGAAGATGGGTCTGAGTTGCATTTCGATGGCTCTCGCTGATTTCTATGCTTCTCGGGGATATTATAAGACCAGACTGATCCTTAACCCCATTGATTCCAATGGCACTGTTCTTCGTGCAGCTGCTGCAGGTTCTCTATAA

Coding sequence (CDS)

ATGAGGAGAAGAAAGGGTTTGGGAGGTGGTTTTGGGGTGTTGGTGGTCGTTATCTTCCTTAACATATTATTGGCGGTGGCGGAGATGGCGGAGGAGAAGGAGGCGGCTGCGGCTGCGGCGGTGAAAGTGAAGGTGGGTGTGGTTTTGGATTTGAATGTTTTTGTTGGGAAGATGGGTCTGAGTTGCATTTCGATGGCTCTCGCTGATTTCTATGCTTCTCGGGGATATTATAAGACCAGACTGATCCTTAACCCCATTGATTCCAATGGCACTGTTCTTCGTGCAGCTGCTGCAGGTTCTCTATAA

Protein sequence

MRRRKGLGGGFGVLVVVIFLNILLAVAEMAEEKEAAAAAAVKVKVGVVLDLNVFVGKMGLSCISMALADFYASRGYYKTRLILNPIDSNGTVLRAAAAGSL
Homology
[Close]
BLAST of Lsi08G012720 vs. Swiss-Prot
Match: GLR26_ARATH (Glutamate receptor 2.6 OS=Arabidopsis thaliana GN=GLR2.6 PE=2 SV=2)

HSP 1 Score: 52.8 bits (125), Expect = 2.6e-06
Identity = 30/85 (35.29%), Postives = 53/85 (62.35%), Query Frame = 1 

Query: 14 LVVVIFLNILLAVAEMAEEKEAAAAAAVKVKVGVVLDLNVFVGKMGLSCISMALADFYAS 73
          L ++ F+N L+ + +  +E        ++V+VG+VLD N  +  + L  I+M+L++FY +
Sbjct: 14 LWLLFFINFLVLLGKSQQE-------VLQVQVGIVLDTNATLAALSLRAINMSLSEFYNT 73

Query: 74 RGYYKTRLILNPIDSNGTVLRAAAA 99
             +KTR++LN  DS  TV+ AAA+
Sbjct: 74 HNGFKTRIVLNIRDSKRTVVGAAAS 91

[Close]
BLAST of Lsi08G012720 vs. Swiss-Prot
Match: GLR25_ARATH (Glutamate receptor 2.5 OS=Arabidopsis thaliana GN=GLR2.5 PE=2 SV=2)

HSP 1 Score: 52.0 bits (123), Expect = 4.5e-06
Identity = 34/85 (40.00%), Postives = 55/85 (64.71%), Query Frame = 1 

Query: 14 LVVVIFLNILLAVAEMAEEKEAAAAAAVKVKVGVVLDLNVFVGKMGLSCISMALADFYAS 73
          L ++IFL + L ++    +KE     A++VKVG+VL  NV +  + L  I+M+L++FY +
Sbjct: 14 LWLLIFL-VFLVLSLGKSQKE-----ALQVKVGIVLGSNVTLADLSLRAINMSLSEFYNT 73

Query: 74 RGYYKTRLILNPIDSNGTVLRAAAA 99
             +KTR++LN  DS  TV+ AAA+
Sbjct: 74 HNGFKTRIVLNVRDSKQTVVGAAAS 92

[Close]
BLAST of Lsi08G012720 vs. Swiss-Prot
Match: GLR28_ARATH (Glutamate receptor 2.8 OS=Arabidopsis thaliana GN=GLR2.8 PE=2 SV=2)

HSP 1 Score: 50.8 bits (120), Expect = 9.9e-06
Identity = 27/57 (47.37%), Postives = 39/57 (68.42%), Query Frame = 1 

Query: 42 KVKVGVVLDLNVFVGKMGLSCISMALADFYASRGYYKTRLILNPIDSNGTVLRAAAA 99
          ++KVGVVLDLN    K+ L+ I++AL+DFY     Y+TRL L+  DS    ++A+AA
Sbjct: 32 EIKVGVVLDLNTTFSKICLTSINLALSDFYKDHPNYRTRLALHVRDSMKDTVQASAA 88

[Close]
BLAST of Lsi08G012720 vs. Swiss-Prot
Match: GLR29_ARATH (Glutamate receptor 2.9 OS=Arabidopsis thaliana GN=GLR2.9 PE=2 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 9.9e-06
Identity = 28/57 (49.12%), Postives = 38/57 (66.67%), Query Frame = 1 

Query: 42 KVKVGVVLDLNVFVGKMGLSCISMALADFYASRGYYKTRLILNPIDSNGTVLRAAAA 99
          ++KVGVVLDLN    K+ L+ I MA++DFYA    Y TRL L+  DS    ++A+AA
Sbjct: 29 EIKVGVVLDLNTTFSKICLTSIKMAVSDFYADHPNYLTRLTLHVRDSMEDTVQASAA 85

[Close]
BLAST of Lsi08G012720 vs. TrEMBL
Match: A0A0A0LSQ2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G383920 PE=4 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 1.6e-31
Identity = 82/105 (78.10%), Postives = 89/105 (84.76%), Query Frame = 1 

Query: 1   MRRRKGLGGGFGVLVVV---IFLNILLA----VAEMAEEKEAAAAAAVKVKVGVVLDLNV 60
           MRR+KGLGGGF V+VVV   IFLNILL     V E  E+KEAAAAAAVKVKVGVVLDLNV
Sbjct: 1   MRRKKGLGGGFRVVVVVVVVIFLNILLRAGAEVTERLEDKEAAAAAAVKVKVGVVLDLNV 60

Query: 61  FVGKMGLSCISMALADFYASRGYYKTRLILNPIDSNGTVLRAAAA 99
            VGK+ LSCISMALADFYA R YYKTR+ILNPIDSNG+V+RAAAA
Sbjct: 61  IVGKISLSCISMALADFYAPRSYYKTRIILNPIDSNGSVIRAAAA 105

[Close]
BLAST of Lsi08G012720 vs. TrEMBL
Match: A0A0A0LPV9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G383900 PE=3 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 4.0e-22
Identity = 66/100 (66.00%), Postives = 75/100 (75.00%), Query Frame = 1 

Query: 1   MRRRKG-LGGGFGVL-VVVIFLNILLAVAEMAEEKEAAAAAAVKVKVGVVLDLNVFVGKM 60
           M + KG + GGF VL V+VI LNI++      EE+E A AA VKVKVG VLDLN   GKM
Sbjct: 1   MEKHKGYMRGGFRVLAVIVILLNIVIMSVAAQEEEEVATAAVVKVKVGAVLDLNFSFGKM 60

Query: 61  GLSCISMALADFYASRGYYKTRLILNPIDSNGTVLRAAAA 99
           GLSCISMALADFY+SR  YKTR+ILN IDSN TV+ AAAA
Sbjct: 61  GLSCISMALADFYSSRSRYKTRVILNTIDSNNTVVGAAAA 100

[Close]
BLAST of Lsi08G012720 vs. TrEMBL
Match: A0A0A0LSQ1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G383380 PE=4 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 4.9e-20
Identity = 62/105 (59.05%), Postives = 75/105 (71.43%), Query Frame = 1 

Query: 1   MRRRKGLG-GGFGVLVVVIFLNILLAVAEMA---EEKEAAAAAAVKVKVGVVLDLNVFVG 60
           MRRRKG     FG L VV+FLN+LL  A +    +++E   A  VKVKVGVV DL+   G
Sbjct: 2   MRRRKGWRCSDFGTLGVVLFLNMLLTAATVVTVHDQEEKVVAGEVKVKVGVVFDLDSIFG 61

Query: 61  KMGLSCISMALADFYASRGYYKTRLILNPIDSNGTVLRAAAAGSL 102
           +M LSCISMAL D Y+SR YYKTR+IL+ IDSN TV+ AAAAGS+
Sbjct: 62  EMSLSCISMALEDLYSSRSYYKTRVILHSIDSNDTVVDAAAAGSI 106

[Close]
BLAST of Lsi08G012720 vs. TrEMBL
Match: A0A0A0LMA6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G383370 PE=3 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 1.6e-18
Identity = 55/98 (56.12%), Postives = 74/98 (75.51%), Query Frame = 1 

Query: 1  MRRRKGLGGGFGVLVVVIFLNILLAVAEMAEEKEAAAAAAVKVKVGVVLDLNVFVGKMGL 60
          MRRRKG+  G  VL++++ L      A+  EE++  A  A+KVKVGVVLD + + GK+ L
Sbjct: 1  MRRRKGMKSGSWVLLMMLLLATATVAAKEEEEEKEKATGALKVKVGVVLDSDDY-GKVDL 60

Query: 61 SCISMALADFYASRGYYKTRLILNPIDSNGTVLRAAAA 99
          SCISMAL+DFYASR ++KTR++L P+DSNGTV+ AAAA
Sbjct: 61 SCISMALSDFYASRSHFKTRVVLKPMDSNGTVVDAAAA 97

[Close]
BLAST of Lsi08G012720 vs. TrEMBL
Match: A0A0A0KCD3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G308940 PE=4 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 7.4e-16
Identity = 54/85 (63.53%), Postives = 65/85 (76.47%), Query Frame = 1 

Query: 8  GGGFGVLVV-VIFLNILLAVAEMAEEKEAAAAAAVKVKVGVVLDLNVFVGKMGLSCISMA 67
          G GF +L +  +FLNIL+     AE  + AAA  V +KVGVVLDLNV VGKMGLSC +M 
Sbjct: 4  GMGFEMLKIGALFLNILVLSVVAAEADKTAAA--VNLKVGVVLDLNV-VGKMGLSCTNMT 63

Query: 68 LADFYASRGYYKTRLILNPIDSNGT 92
          L+DFYA+R YYKT+LILNP+DSNGT
Sbjct: 64 LSDFYANRSYYKTKLILNPMDSNGT 85

[Close]
BLAST of Lsi08G012720 vs. TAIR10
Match: AT5G11180.1 (AT5G11180.1 glutamate receptor 2.6)

HSP 1 Score: 52.8 bits (125), Expect = 1.5e-07
Identity = 30/85 (35.29%), Postives = 53/85 (62.35%), Query Frame = 1 

Query: 14 LVVVIFLNILLAVAEMAEEKEAAAAAAVKVKVGVVLDLNVFVGKMGLSCISMALADFYAS 73
          L ++ F+N L+ + +  +E        ++V+VG+VLD N  +  + L  I+M+L++FY +
Sbjct: 14 LWLLFFINFLVLLGKSQQE-------VLQVQVGIVLDTNATLAALSLRAINMSLSEFYNT 73

Query: 74 RGYYKTRLILNPIDSNGTVLRAAAA 99
             +KTR++LN  DS  TV+ AAA+
Sbjct: 74 HNGFKTRIVLNIRDSKRTVVGAAAS 91

[Close]
BLAST of Lsi08G012720 vs. TAIR10
Match: AT2G29110.1 (AT2G29110.1 glutamate receptor 2.8)

HSP 1 Score: 50.8 bits (120), Expect = 5.6e-07
Identity = 27/57 (47.37%), Postives = 39/57 (68.42%), Query Frame = 1 

Query: 42 KVKVGVVLDLNVFVGKMGLSCISMALADFYASRGYYKTRLILNPIDSNGTVLRAAAA 99
          ++KVGVVLDLN    K+ L+ I++AL+DFY     Y+TRL L+  DS    ++A+AA
Sbjct: 32 EIKVGVVLDLNTTFSKICLTSINLALSDFYKDHPNYRTRLALHVRDSMKDTVQASAA 88

[Close]
BLAST of Lsi08G012720 vs. TAIR10
Match: AT2G29100.1 (AT2G29100.1 glutamate receptor 2.9)

HSP 1 Score: 50.8 bits (120), Expect = 5.6e-07
Identity = 28/57 (49.12%), Postives = 38/57 (66.67%), Query Frame = 1 

Query: 42 KVKVGVVLDLNVFVGKMGLSCISMALADFYASRGYYKTRLILNPIDSNGTVLRAAAA 99
          ++KVGVVLDLN    K+ L+ I MA++DFYA    Y TRL L+  DS    ++A+AA
Sbjct: 29 EIKVGVVLDLNTTFSKICLTSIKMAVSDFYADHPNYLTRLTLHVRDSMEDTVQASAA 85

[Close]
BLAST of Lsi08G012720 vs. TAIR10
Match: AT2G24720.1 (AT2G24720.1 glutamate receptor 2.2)

HSP 1 Score: 50.4 bits (119), Expect = 7.3e-07
Identity = 25/57 (43.86%), Postives = 38/57 (66.67%), Query Frame = 1 

Query: 42 KVKVGVVLDLNVFVGKMGLSCISMALADFYASRGYYKTRLILNPIDSNGTVLRAAAA 99
          +V +GVV D+      + + CI+M+LADFY+SR  ++TRL++N  DS   V+ AA A
Sbjct: 31 QVNIGVVSDVGTSYPDVAMLCINMSLADFYSSRPQFQTRLVVNVGDSKNDVVGAATA 87

[Close]
BLAST of Lsi08G012720 vs. TAIR10
Match: AT5G48400.2 (AT5G48400.2 Glutamate receptor family protein)

HSP 1 Score: 49.3 bits (116), Expect = 1.6e-06
Identity = 32/83 (38.55%), Postives = 51/83 (61.45%), Query Frame = 1 

Query: 13 VLVVVIFLNILLAVAEMAEEKEAAAAAAVKVKVGVVLDLNVFVGKMGLSCISMALADFYA 72
          +LV++ F++   A ++  ++ +      ++V+VG+VLDL    GK+  S +SMAL+DFY 
Sbjct: 15 LLVLLFFISNCFASSQNNDDDKR-----IRVRVGLVLDLGSVEGKIVRSSVSMALSDFYD 74

Query: 73 SRGYYKTRLILNPIDSNGTVLRA 96
          +   YKTRL L   DS+G  L A
Sbjct: 75 NHNDYKTRLSLLVRDSHGEPLLA 92

[Close]
BLAST of Lsi08G012720 vs. NCBI nr
Match: gi|659089049|ref|XP_008445301.1| (PREDICTED: glutamate receptor 2.8-like isoform X2 [Cucumis melo])

HSP 1 Score: 148.7 bits (374), Expect = 5.6e-33
Identity = 85/103 (82.52%), Postives = 90/103 (87.38%), Query Frame = 1 

Query: 1   MRRRKGLGGGFGVLVVV-IFLNILLA----VAEMAEEKEAAAAAAVKVKVGVVLDLNVFV 60
           MRR+KGLGGGF V+VVV IFLNILL     V E  EEKEAAAAAAVKVKVGVVLDLNV V
Sbjct: 1   MRRKKGLGGGFRVVVVVVIFLNILLTAVAKVTEPLEEKEAAAAAAVKVKVGVVLDLNVIV 60

Query: 61  GKMGLSCISMALADFYASRGYYKTRLILNPIDSNGTVLRAAAA 99
           GKM LSCISMALADFYASR YYKTR+ILNPIDSNG+V+RAAAA
Sbjct: 61  GKMSLSCISMALADFYASRSYYKTRIILNPIDSNGSVIRAAAA 103

[Close]
BLAST of Lsi08G012720 vs. NCBI nr
Match: gi|659089047|ref|XP_008445300.1| (PREDICTED: glutamate receptor 2.1-like isoform X1 [Cucumis melo])

HSP 1 Score: 148.7 bits (374), Expect = 5.6e-33
Identity = 85/103 (82.52%), Postives = 90/103 (87.38%), Query Frame = 1 

Query: 1   MRRRKGLGGGFGVLVVV-IFLNILLA----VAEMAEEKEAAAAAAVKVKVGVVLDLNVFV 60
           MRR+KGLGGGF V+VVV IFLNILL     V E  EEKEAAAAAAVKVKVGVVLDLNV V
Sbjct: 1   MRRKKGLGGGFRVVVVVVIFLNILLTAVAKVTEPLEEKEAAAAAAVKVKVGVVLDLNVIV 60

Query: 61  GKMGLSCISMALADFYASRGYYKTRLILNPIDSNGTVLRAAAA 99
           GKM LSCISMALADFYASR YYKTR+ILNPIDSNG+V+RAAAA
Sbjct: 61  GKMSLSCISMALADFYASRSYYKTRIILNPIDSNGSVIRAAAA 103

[Close]
BLAST of Lsi08G012720 vs. NCBI nr
Match: gi|778674401|ref|XP_004138837.2| (PREDICTED: glutamate receptor 2.5-like [Cucumis sativus])

HSP 1 Score: 143.3 bits (360), Expect = 2.3e-31
Identity = 82/105 (78.10%), Postives = 89/105 (84.76%), Query Frame = 1 

Query: 1   MRRRKGLGGGFGVLVVV---IFLNILLA----VAEMAEEKEAAAAAAVKVKVGVVLDLNV 60
           MRR+KGLGGGF V+VVV   IFLNILL     V E  E+KEAAAAAAVKVKVGVVLDLNV
Sbjct: 1   MRRKKGLGGGFRVVVVVVVVIFLNILLRAGAEVTERLEDKEAAAAAAVKVKVGVVLDLNV 60

Query: 61  FVGKMGLSCISMALADFYASRGYYKTRLILNPIDSNGTVLRAAAA 99
            VGK+ LSCISMALADFYA R YYKTR+ILNPIDSNG+V+RAAAA
Sbjct: 61  IVGKISLSCISMALADFYAPRSYYKTRIILNPIDSNGSVIRAAAA 105

[Close]
BLAST of Lsi08G012720 vs. NCBI nr
Match: gi|700207902|gb|KGN63021.1| (hypothetical protein Csa_2G383920 [Cucumis sativus])

HSP 1 Score: 143.3 bits (360), Expect = 2.3e-31
Identity = 82/105 (78.10%), Postives = 89/105 (84.76%), Query Frame = 1 

Query: 1   MRRRKGLGGGFGVLVVV---IFLNILLA----VAEMAEEKEAAAAAAVKVKVGVVLDLNV 60
           MRR+KGLGGGF V+VVV   IFLNILL     V E  E+KEAAAAAAVKVKVGVVLDLNV
Sbjct: 1   MRRKKGLGGGFRVVVVVVVVIFLNILLRAGAEVTERLEDKEAAAAAAVKVKVGVVLDLNV 60

Query: 61  FVGKMGLSCISMALADFYASRGYYKTRLILNPIDSNGTVLRAAAA 99
            VGK+ LSCISMALADFYA R YYKTR+ILNPIDSNG+V+RAAAA
Sbjct: 61  IVGKISLSCISMALADFYAPRSYYKTRIILNPIDSNGSVIRAAAA 105

[Close]
BLAST of Lsi08G012720 vs. NCBI nr
Match: gi|778674398|ref|XP_011650202.1| (PREDICTED: glutamate receptor 2.5-like [Cucumis sativus])

HSP 1 Score: 112.1 bits (279), Expect = 5.8e-22
Identity = 66/100 (66.00%), Postives = 75/100 (75.00%), Query Frame = 1 

Query: 1   MRRRKG-LGGGFGVL-VVVIFLNILLAVAEMAEEKEAAAAAAVKVKVGVVLDLNVFVGKM 60
           M + KG + GGF VL V+VI LNI++      EE+E A AA VKVKVG VLDLN   GKM
Sbjct: 1   MEKHKGYMRGGFRVLAVIVILLNIVIMSVAAQEEEEVATAAVVKVKVGAVLDLNFSFGKM 60

Query: 61  GLSCISMALADFYASRGYYKTRLILNPIDSNGTVLRAAAA 99
           GLSCISMALADFY+SR  YKTR+ILN IDSN TV+ AAAA
Sbjct: 61  GLSCISMALADFYSSRSRYKTRVILNTIDSNNTVVGAAAA 100

The following BLAST results are available for this feature:
BLAST of Lsi08G012720 vs. Swiss-Prot
Match NameE-valueIdentityDescription
GLR26_ARATH2.6e-0635.29Glutamate receptor 2.6 OS=Arabidopsis thaliana GN=GLR2.6 PE=2 SV=2[more]
GLR25_ARATH4.5e-0640.00Glutamate receptor 2.5 OS=Arabidopsis thaliana GN=GLR2.5 PE=2 SV=2[more]
GLR28_ARATH9.9e-0647.37Glutamate receptor 2.8 OS=Arabidopsis thaliana GN=GLR2.8 PE=2 SV=2[more]
GLR29_ARATH9.9e-0649.12Glutamate receptor 2.9 OS=Arabidopsis thaliana GN=GLR2.9 PE=2 SV=1[more]
BLAST of Lsi08G012720 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LSQ2_CUCSA1.6e-3178.10Uncharacterized protein OS=Cucumis sativus GN=Csa_2G383920 PE=4 SV=1[more]
A0A0A0LPV9_CUCSA4.0e-2266.00Uncharacterized protein OS=Cucumis sativus GN=Csa_2G383900 PE=3 SV=1[more]
A0A0A0LSQ1_CUCSA4.9e-2059.05Uncharacterized protein OS=Cucumis sativus GN=Csa_2G383380 PE=4 SV=1[more]
A0A0A0LMA6_CUCSA1.6e-1856.12Uncharacterized protein OS=Cucumis sativus GN=Csa_2G383370 PE=3 SV=1[more]
A0A0A0KCD3_CUCSA7.4e-1663.53Uncharacterized protein OS=Cucumis sativus GN=Csa_6G308940 PE=4 SV=1[more]
BLAST of Lsi08G012720 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G11180.11.5e-0735.29 glutamate receptor 2.6[more]
AT2G29110.15.6e-0747.37 glutamate receptor 2.8[more]
AT2G29100.15.6e-0749.12 glutamate receptor 2.9[more]
AT2G24720.17.3e-0743.86 glutamate receptor 2.2[more]
AT5G48400.21.6e-0638.55 Glutamate receptor family protein[more]
BLAST of Lsi08G012720 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659089049|ref|XP_008445301.1|5.6e-3382.52PREDICTED: glutamate receptor 2.8-like isoform X2 [Cucumis melo][more]
gi|659089047|ref|XP_008445300.1|5.6e-3382.52PREDICTED: glutamate receptor 2.1-like isoform X1 [Cucumis melo][more]
gi|778674401|ref|XP_004138837.2|2.3e-3178.10PREDICTED: glutamate receptor 2.5-like [Cucumis sativus][more]
gi|700207902|gb|KGN63021.1|2.3e-3178.10hypothetical protein Csa_2G383920 [Cucumis sativus][more]
gi|778674398|ref|XP_011650202.1|5.8e-2266.00PREDICTED: glutamate receptor 2.5-like [Cucumis sativus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007268 chemical synaptic transmission
biological_process GO:0035235 ionotropic glutamate receptor signaling pathway
biological_process GO:0006811 ion transport
biological_process GO:0007186 G-protein coupled receptor signaling pathway
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0004970 ionotropic glutamate receptor activity
molecular_function GO:0004930 G-protein coupled receptor activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi08G012720.1Lsi08G012720.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR34836FAMILY NOT NAMEDcoord: 6..101
score: 1.2
NoneNo IPR availablePANTHERPTHR34836:SF1SUBFAMILY NOT NAMEDcoord: 6..101
score: 1.2

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Lsi08G012720MELO3C011325.2Melon (DHL92) v3.6.1lsimedB493
Lsi08G012720CsGy2G023920Cucumber (Gy14) v2cgyblsiB126
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi08G012720Cucurbita maxima (Rimu)cmalsiB184
Lsi08G012720Cucurbita maxima (Rimu)cmalsiB739
Lsi08G012720Cucurbita moschata (Rifu)cmolsiB175
Lsi08G012720Cucurbita moschata (Rifu)cmolsiB731
Lsi08G012720Cucurbita pepo (Zucchini)cpelsiB100
Lsi08G012720Cucurbita pepo (Zucchini)cpelsiB685
Lsi08G012720Melon (DHL92) v3.5.1lsimeB474
Lsi08G012720Watermelon (Charleston Gray)lsiwcgB438
Lsi08G012720Watermelon (97103) v1lsiwmB465
Lsi08G012720Silver-seed gourdcarlsiB128
Lsi08G012720Silver-seed gourdcarlsiB898
Lsi08G012720Watermelon (97103) v2lsiwmbB444
Lsi08G012720Wax gourdlsiwgoB592