BLAST of Lsi08G011960 vs. Swiss-Prot
Match:
PP330_ARATH (Pentatricopeptide repeat-containing protein At4g21065 OS=Arabidopsis thaliana GN=PCMP-H28 PE=2 SV=2)
HSP 1 Score: 503.8 bits (1296), Expect = 2.6e-141
Identity = 256/584 (43.84%), Postives = 388/584 (66.44%), Query Frame = 1
Query: 29 QNCLALLQA--CNALPKLTQIHTHIIKLGLHNNPLVLTKFASISSFIHATDYAACFLFSA 88
+ C+ LLQ +++ KL QIH I+ G+ + L K + ++ + ++
Sbjct: 16 EKCINLLQTYGVSSITKLRQIHAFSIRHGVSISDAELGKH--LIFYLVSLPSPPPMSYAH 75
Query: 89 EADTRL---YDAFLFNTLIRAYAQTGHSKDKALSLYGIMLHDGIL-PNKFTYPFVLKACA 148
+ +++ + F++NTLIR YA+ G+S A SLY M G++ P+ TYPF++KA
Sbjct: 76 KVFSKIEKPINVFIWNTLIRGYAEIGNSIS-AFSLYREMRVSGLVEPDTHTYPFLIKAVT 135
Query: 149 GLEVLNLGQSVHGSVVKFGFDRDIHVQNTMVHMYSCCAGGINSARKLFDEMPKSDSVTWS 208
+ + LG+++H V++ GF I+VQN+++H+Y+ C G + SA K+FD+MP+ D V W+
Sbjct: 136 TMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANC-GDVASAYKVFDKMPEKDLVAWN 195
Query: 209 AMIGGYARVGRSTEAVALFREMQMAEVCPDEITMVSMLSACTDLGALELGKWIEAYIERQ 268
++I G+A G+ EA+AL+ EM + PD T+VS+LSAC +GAL LGK + Y+ +
Sbjct: 196 SVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKV 255
Query: 269 GIQKPVVVTNALIDMFAKCGDISKALKLFRTMNEKTIVSWTSVIVGMAMHGRGQEAICLF 328
G+ + + +N L+D++A+CG + +A LF M +K VSWTS+IVG+A++G G+EAI LF
Sbjct: 256 GLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELF 315
Query: 329 EEMIGS-GVPPDGVAFIGLLSACSHSGLVERGREYFSSMMKKYKLVPKIEHYGCMVDMYC 388
+ M + G+ P + F+G+L ACSH G+V+ G EYF M ++YK+ P+IEH+GCMVD+
Sbjct: 316 KYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLA 375
Query: 389 RTGLVKEALEFVRNMPIEPNPVILRTLVSACRGHGEFKLGEKITKLLMRHEPLHESNYVL 448
R G VK+A E++++MP++PN VI RTL+ AC HG+ L E +++ EP H +YVL
Sbjct: 376 RAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVL 435
Query: 449 LSNIYAKMLSWEKKTKIREVMEVKGMKKVPGSTMIEIDNEIYEFVAGDKSHKQFKEIYEM 508
LSN+YA W KIR+ M G+KKVPG +++E+ N ++EF+ GDKSH Q IY
Sbjct: 436 LSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAK 495
Query: 509 VDEMGREMKKSGYRPSTSEVLLDINEEDKEDTLNRHSEKLAIAFGLLSTPPGTPIRIVKN 568
+ EM ++ GY P S V +D+ EE+KE+ + HSEK+AIAF L+STP +PI +VKN
Sbjct: 496 LKEMTGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKN 555
Query: 569 LRVCNDCHSASKFISKIYDREIIMRDRNRFHHFKSGQCSCGDFW 606
LRVC DCH A K +SK+Y+REI++RDR+RFHHFK+G CSC D+W
Sbjct: 556 LRVCADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595
BLAST of Lsi08G011960 vs. Swiss-Prot
Match:
PP145_ARATH (Pentatricopeptide repeat-containing protein At2g02980, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H26 PE=2 SV=2)
HSP 1 Score: 500.0 bits (1286), Expect = 3.7e-140
Identity = 253/580 (43.62%), Postives = 381/580 (65.69%), Query Frame = 1
Query: 29 QNCLALLQACNALPKLTQIHTHIIKLGLHNNPLV--LTKFASISSFIHATDYAACFLFSA 88
QN + L+ CN+L +L QI + IK + + V L F + S + YA LF A
Sbjct: 30 QNPILLISKCNSLRELMQIQAYAIKSHIEDVSFVAKLINFCTESPTESSMSYAR-HLFEA 89
Query: 89 EADTRLYDAFLFNTLIRAYAQTGHSKDKALSLYGIMLHDGILPNKFTYPFVLKACAGLEV 148
++ D +FN++ R Y++ + + SL+ +L DGILP+ +T+P +LKACA +
Sbjct: 90 MSEP---DIVIFNSMARGYSRFTNPLE-VFSLFVEILEDGILPDNYTFPSLLKACAVAKA 149
Query: 149 LNLGQSVHGSVVKFGFDRDIHVQNTMVHMYSCCAGGINSARKLFDEMPKSDSVTWSAMIG 208
L G+ +H +K G D +++V T+++MY+ C ++SAR +FD + + V ++AMI
Sbjct: 150 LEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECED-VDSARCVFDRIVEPCVVCYNAMIT 209
Query: 209 GYARVGRSTEAVALFREMQMAEVCPDEITMVSMLSACTDLGALELGKWIEAYIERQGIQK 268
GYAR R EA++LFREMQ + P+EIT++S+LS+C LG+L+LGKWI Y ++ K
Sbjct: 210 GYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCK 269
Query: 269 PVVVTNALIDMFAKCGDISKALKLFRTMNEKTIVSWTSVIVGMAMHGRGQEAICLFEEMI 328
V V ALIDMFAKCG + A+ +F M K +W+++IV A HG+ ++++ +FE M
Sbjct: 270 YVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMR 329
Query: 329 GSGVPPDGVAFIGLLSACSHSGLVERGREYFSSMMKKYKLVPKIEHYGCMVDMYCRTGLV 388
V PD + F+GLL+ACSH+G VE GR+YFS M+ K+ +VP I+HYG MVD+ R G +
Sbjct: 330 SENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNL 389
Query: 389 KEALEFVRNMPIEPNPVILRTLVSACRGHGEFKLGEKITKLLMRHEPLHESNYVLLSNIY 448
++A EF+ +PI P P++ R L++AC H L EK+++ + + H +YV+LSN+Y
Sbjct: 390 EDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLY 449
Query: 449 AKMLSWEKKTKIREVMEVKGMKKVPGSTMIEIDNEIYEFVAGDKSHKQFKEIYEMVDEMG 508
A+ WE +R+VM+ + KVPG + IE++N ++EF +GD +++ +DEM
Sbjct: 450 ARNKKWEYVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEMV 509
Query: 509 REMKKSGYRPSTSEVL-LDINEEDKEDTLNRHSEKLAIAFGLLSTPPGTPIRIVKNLRVC 568
+E+K SGY P TS V+ ++N+++KE TL HSEKLAI FGLL+TPPGT IR+VKNLRVC
Sbjct: 510 KELKLSGYVPDTSMVVHANMNDQEKEITLRYHSEKLAITFGLLNTPPGTTIRVVKNLRVC 569
Query: 569 NDCHSASKFISKIYDREIIMRDRNRFHHFKSGQCSCGDFW 606
DCH+A+K IS I+ R++++RD RFHHF+ G+CSCGDFW
Sbjct: 570 RDCHNAAKLISLIFGRKVVLRDVQRFHHFEDGKCSCGDFW 603
BLAST of Lsi08G011960 vs. Swiss-Prot
Match:
PPR21_ARATH (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1)
HSP 1 Score: 490.7 bits (1262), Expect = 2.2e-137
Identity = 237/514 (46.11%), Postives = 343/514 (66.73%), Query Frame = 1
Query: 94 DAFLFNTLIRAYAQTGHSKDKALSLYGIMLHDGILPNKFTYPFVLKACAGLEVLNLGQSV 153
D +N +I YA+TG+ K+ AL L+ M+ + P++ T V+ ACA + LG+ V
Sbjct: 230 DVVSWNAMISGYAETGNYKE-ALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQV 289
Query: 154 HGSVVKFGFDRDIHVQNTMVHMYSCCAGGINSARKLFDEMPKSDSVTWSAMIGGYARVGR 213
H + GF ++ + N ++ +YS C G + +A LF+ +P D ++W+ +IGGY +
Sbjct: 290 HLWIDDHGFGSNLKIVNALIDLYSKC-GELETACGLFERLPYKDVISWNTLIGGYTHMNL 349
Query: 214 STEAVALFREMQMAEVCPDEITMVSMLSACTDLGALELGKWIEAYIERQ--GIQKPVVVT 273
EA+ LF+EM + P+++TM+S+L AC LGA+++G+WI YI+++ G+ +
Sbjct: 350 YKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLR 409
Query: 274 NALIDMFAKCGDISKALKLFRTMNEKTIVSWTSVIVGMAMHGRGQEAICLFEEMIGSGVP 333
+LIDM+AKCGDI A ++F ++ K++ SW ++I G AMHGR + LF M G+
Sbjct: 410 TSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQ 469
Query: 334 PDGVAFIGLLSACSHSGLVERGREYFSSMMKKYKLVPKIEHYGCMVDMYCRTGLVKEALE 393
PD + F+GLLSACSHSG+++ GR F +M + YK+ PK+EHYGCM+D+ +GL KEA E
Sbjct: 470 PDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEE 529
Query: 394 FVRNMPIEPNPVILRTLVSACRGHGEFKLGEKITKLLMRHEPLHESNYVLLSNIYAKMLS 453
+ M +EP+ VI +L+ AC+ HG +LGE + L++ EP + +YVLLSNIYA
Sbjct: 530 MINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGR 589
Query: 454 WEKKTKIREVMEVKGMKKVPGSTMIEIDNEIYEFVAGDKSHKQFKEIYEMVDEMGREMKK 513
W + K R ++ KGMKKVPG + IEID+ ++EF+ GDK H + +EIY M++EM ++K
Sbjct: 590 WNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEK 649
Query: 514 SGYRPSTSEVLLDINEEDKEDTLNRHSEKLAIAFGLLSTPPGTPIRIVKNLRVCNDCHSA 573
+G+ P TSEVL ++ EE KE L HSEKLAIAFGL+ST PGT + IVKNLRVC +CH A
Sbjct: 650 AGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEA 709
Query: 574 SKFISKIYDREIIMRDRNRFHHFKSGQCSCGDFW 606
+K ISKIY REII RDR RFHHF+ G CSC D+W
Sbjct: 710 TKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741
BLAST of Lsi08G011960 vs. Swiss-Prot
Match:
PP449_ARATH (Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana GN=PCMP-H61 PE=2 SV=1)
HSP 1 Score: 476.9 bits (1226), Expect = 3.4e-133
Identity = 236/605 (39.01%), Postives = 372/605 (61.49%), Query Frame = 1
Query: 32 LALLQACNALPKLTQIHTHIIKLGLHNNPLVLTKFASISSFIHATDYAACFLFSAEADTR 91
++ LQ C+ +L QIH ++K GL + +TKF S ++D+ + R
Sbjct: 18 MSCLQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDR 77
Query: 92 LYDAFLFNTLIRAYAQTGHSKDKALSLYGIMLHDGILPNKFTYPFVLKACAGLEVLNLGQ 151
D FL+N +IR ++ +++L LY ML N +T+P +LKAC+ L
Sbjct: 78 P-DTFLWNLMIRGFS-CSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETT 137
Query: 152 SVHGSVVKFGFDRDIHVQNTMVHMYSCC------------------------------AG 211
+H + K G++ D++ N++++ Y+ AG
Sbjct: 138 QIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAG 197
Query: 212 GINSARKLFDEMPKSDSVTWSAMIGGYARVGRSTEAVALFREMQMAEVCPDEITMVSMLS 271
++ A LF +M + ++++W+ MI GY + + EA+ LF EMQ ++V PD +++ + LS
Sbjct: 198 KMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALS 257
Query: 272 ACTDLGALELGKWIEAYIERQGIQKPVVVTNALIDMFAKCGDISKALKLFRTMNEKTIVS 331
AC LGALE GKWI +Y+ + I+ V+ LIDM+AKCG++ +AL++F+ + +K++ +
Sbjct: 258 ACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQA 317
Query: 332 WTSVIVGMAMHGRGQEAICLFEEMIGSGVPPDGVAFIGLLSACSHSGLVERGREYFSSMM 391
WT++I G A HG G+EAI F EM G+ P+ + F +L+ACS++GLVE G+ F SM
Sbjct: 318 WTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSME 377
Query: 392 KKYKLVPKIEHYGCMVDMYCRTGLVKEALEFVRNMPIEPNPVILRTLVSACRGHGEFKLG 451
+ Y L P IEHYGC+VD+ R GL+ EA F++ MP++PN VI L+ ACR H +LG
Sbjct: 378 RDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELG 437
Query: 452 EKITKLLMRHEPLHESNYVLLSNIYAKMLSWEKKTKIREVMEVKGMKKVPGSTMIEIDNE 511
E+I ++L+ +P H YV +NI+A W+K + R +M+ +G+ KVPG + I ++
Sbjct: 438 EEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGT 497
Query: 512 IYEFVAGDKSHKQFKEIYEMVDEMGREMKKSGYRPSTSEVLLD-INEEDKEDTLNRHSEK 571
+EF+AGD+SH + ++I M R+++++GY P E+LLD ++++++E +++HSEK
Sbjct: 498 THEFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLLDLVDDDEREAIVHQHSEK 557
Query: 572 LAIAFGLLSTPPGTPIRIVKNLRVCNDCHSASKFISKIYDREIIMRDRNRFHHFKSGQCS 606
LAI +GL+ T PGT IRI+KNLRVC DCH +K ISKIY R+I+MRDR RFHHF+ G+CS
Sbjct: 558 LAITYGLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDRTRFHHFRDGKCS 617
BLAST of Lsi08G011960 vs. Swiss-Prot
Match:
PPR68_ARATH (Pentatricopeptide repeat-containing protein At1g31920 OS=Arabidopsis thaliana GN=PCMP-H11 PE=2 SV=1)
HSP 1 Score: 469.2 bits (1206), Expect = 7.0e-131
Identity = 235/584 (40.24%), Postives = 377/584 (64.55%), Query Frame = 1
Query: 28 EQNCLALLQACNALPKLTQIHTHIIKLGLHNNPL-----VLTKFASISSFIHATDYAACF 87
EQ CL LL+ C+ + + Q+H IKL L + VL K A S + ++ +YAA
Sbjct: 30 EQECLYLLKRCHNIDEFKQVHARFIKLSLFYSSSFSASSVLAKCAH-SGWENSMNYAAS- 89
Query: 88 LFSAEADTRLYDAFLFNTLIRAYAQTGHSKDKALSLYGIMLHDGILPNKFTYPFVLKACA 147
+F D +D FNT+IR Y S ++AL Y M+ G P+ FTYP +LKAC
Sbjct: 90 IFRGIDDPCTFD---FNTMIRGYVNV-MSFEEALCFYNEMMQRGNEPDNFTYPCLLKACT 149
Query: 148 GLEVLNLGQSVHGSVVKFGFDRDIHVQNTMVHMYSCCAGGINSARKLFDEMPKSDSVTWS 207
L+ + G+ +HG V K G + D+ VQN++++MY C G + + +F+++ + +WS
Sbjct: 150 RLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRC-GEMELSSAVFEKLESKTAASWS 209
Query: 208 AMIGGYARVGRSTEAVALFREM-QMAEVCPDEITMVSMLSACTDLGALELGKWIEAYIER 267
+M+ A +G +E + LFR M + +E MVS L AC + GAL LG I ++ R
Sbjct: 210 SMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLR 269
Query: 268 QGIQKPVVVTNALIDMFAKCGDISKALKLFRTMNEKTIVSWTSVIVGMAMHGRGQEAICL 327
+ ++V +L+DM+ KCG + KAL +F+ M ++ ++++++I G+A+HG G+ A+ +
Sbjct: 270 NISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRM 329
Query: 328 FEEMIGSGVPPDGVAFIGLLSACSHSGLVERGREYFSSMMKKYKLVPKIEHYGCMVDMYC 387
F +MI G+ PD V ++ +L+ACSHSGLV+ GR F+ M+K+ K+ P EHYGC+VD+
Sbjct: 330 FSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLG 389
Query: 388 RTGLVKEALEFVRNMPIEPNPVILRTLVSACRGHGEFKLGEKITKLLMRHEPLHESNYVL 447
R GL++EALE ++++PIE N VI RT +S CR +LG+ + L++ + +Y+L
Sbjct: 390 RAGLLEEALETIQSIPIEKNDVIWRTFLSQCRVRQNIELGQIAAQELLKLSSHNPGDYLL 449
Query: 448 LSNIYAKMLSWEKKTKIREVMEVKGMKKVPGSTMIEIDNEIYEFVAGDKSHKQFKEIYEM 507
+SN+Y++ W+ + R + +KG+K+ PG +++E+ + + FV+ D+SH + KEIY+M
Sbjct: 450 ISNLYSQGQMWDDVARTRTEIAIKGLKQTPGFSIVELKGKTHRFVSQDRSHPKCKEIYKM 509
Query: 508 VDEMGREMKKSGYRPSTSEVLLDINEEDKEDTLNRHSEKLAIAFGLLSTPPGTPIRIVKN 567
+ +M ++K GY P +++LL+++EE+K++ L HS+K+AIAFGLL TPPG+ I+I +N
Sbjct: 510 LHQMEWQLKFEGYSPDLTQILLNVDEEEKKERLKGHSQKVAIAFGLLYTPPGSIIKIARN 569
Query: 568 LRVCNDCHSASKFISKIYDREIIMRDRNRFHHFKSGQCSCGDFW 606
LR+C+DCH+ +K IS IY+REI++RDRNRFH FK G CSC D+W
Sbjct: 570 LRMCSDCHTYTKKISMIYEREIVVRDRNRFHLFKGGTCSCKDYW 606
BLAST of Lsi08G011960 vs. TrEMBL
Match:
A0A0A0LQ71_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G381680 PE=4 SV=1)
HSP 1 Score: 1154.4 bits (2985), Expect = 0.0e+00
Identity = 574/606 (94.72%), Postives = 583/606 (96.20%), Query Frame = 1
Query: 1 MQSQFTKTKLLRVINNVSASTT-NPRAAEQNCLALLQACNALPKLTQIHTHIIKLGLHNN 60
MQSQFTK KLLR INNV AS+T NPRA EQNCLALLQACNALPKLTQIHTHI+KLGLHNN
Sbjct: 1 MQSQFTKPKLLRTINNVLASSTPNPRAPEQNCLALLQACNALPKLTQIHTHILKLGLHNN 60
Query: 61 PLVLTKFASISSFIHATDYAACFLFSAEADTRLYDAFLFNTLIRAYAQTGHSKDKALSLY 120
PLVLTKFASISS IHATDYAA FLFSAEADTRLYDAFLFNTLIRAYAQTGHSKDKAL+LY
Sbjct: 61 PLVLTKFASISSLIHATDYAASFLFSAEADTRLYDAFLFNTLIRAYAQTGHSKDKALALY 120
Query: 121 GIMLHDGILPNKFTYPFVLKACAGLEVLNLGQSVHGSVVKFGFDRDIHVQNTMVHMYSCC 180
GIMLHD ILPNKFTYPFVLKACAGLEVLNLGQ+VHGSVVKFGFD DIHVQNTMVHMYSCC
Sbjct: 121 GIMLHDAILPNKFTYPFVLKACAGLEVLNLGQTVHGSVVKFGFDCDIHVQNTMVHMYSCC 180
Query: 181 AGGINSARKLFDEMPKSDSVTWSAMIGGYARVGRSTEAVALFREMQMAEVCPDEITMVSM 240
AGGINSARK+FDEMPKSDSVTWSAMIGGYARVGRSTEAVALFREMQMAEVCPDEITMVSM
Sbjct: 181 AGGINSARKVFDEMPKSDSVTWSAMIGGYARVGRSTEAVALFREMQMAEVCPDEITMVSM 240
Query: 241 LSACTDLGALELGKWIEAYIERQGIQKPVVVTNALIDMFAKCGDISKALKLFRTMNEKTI 300
LSACTDLGALELGKWIEAYIER I KPV V+NALIDMFAKCGDISKALKLFR MNEKTI
Sbjct: 241 LSACTDLGALELGKWIEAYIERHEIHKPVEVSNALIDMFAKCGDISKALKLFRAMNEKTI 300
Query: 301 VSWTSVIVGMAMHGRGQEAICLFEEMIGSGVPPDGVAFIGLLSACSHSGLVERGREYFSS 360
VSWTSVIVGMAMHGRGQEA CLFEEM SGV PD VAFIGLLSACSHSGLVERGREYF S
Sbjct: 301 VSWTSVIVGMAMHGRGQEATCLFEEMTSSGVAPDDVAFIGLLSACSHSGLVERGREYFGS 360
Query: 361 MMKKYKLVPKIEHYGCMVDMYCRTGLVKEALEFVRNMPIEPNPVILRTLVSACRGHGEFK 420
MMKKYKLVPKIEHYGCMVDMYCRTGLVKEALEFVRNMPIEPNPVILRTLVSACRGHGEFK
Sbjct: 361 MMKKYKLVPKIEHYGCMVDMYCRTGLVKEALEFVRNMPIEPNPVILRTLVSACRGHGEFK 420
Query: 421 LGEKITKLLMRHEPLHESNYVLLSNIYAKMLSWEKKTKIREVMEVKGMKKVPGSTMIEID 480
LGEKITKLLM+HEPLHESNYVLLSNIYAK LSWEKKTKIREVMEVKGMKKVPGSTMIEID
Sbjct: 421 LGEKITKLLMKHEPLHESNYVLLSNIYAKTLSWEKKTKIREVMEVKGMKKVPGSTMIEID 480
Query: 481 NEIYEFVAGDKSHKQFKEIYEMVDEMGREMKKSGYRPSTSEVLLDINEEDKEDTLNRHSE 540
NEIYEFVAGDKSHKQ KEIYEMVDEMGREMKKSGYRPSTSEVLLDINEEDKED+LNRHSE
Sbjct: 481 NEIYEFVAGDKSHKQHKEIYEMVDEMGREMKKSGYRPSTSEVLLDINEEDKEDSLNRHSE 540
Query: 541 KLAIAFGLLSTPPGTPIRIVKNLRVCNDCHSASKFISKIYDREIIMRDRNRFHHFKSGQC 600
KLAIAFGLL TPPGTPIRIVKNLRVC+DCHSASKFISKIYDREIIMRDRNRFHHFKSGQC
Sbjct: 541 KLAIAFGLLRTPPGTPIRIVKNLRVCSDCHSASKFISKIYDREIIMRDRNRFHHFKSGQC 600
Query: 601 SCGDFW 606
SCGDFW
Sbjct: 601 SCGDFW 606
BLAST of Lsi08G011960 vs. TrEMBL
Match:
W9RXB9_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_001891 PE=4 SV=1)
HSP 1 Score: 922.2 bits (2382), Expect = 3.4e-265
Identity = 447/605 (73.88%), Postives = 515/605 (85.12%), Query Frame = 1
Query: 1 MQSQFTKTKLLRVINNVSASTTNPRAAEQNCLALLQACNALPKLTQIHTHIIKLGLHNNP 60
MQ Q K ++R + N RAAEQ+CL+LL+AC+A K Q+ HI+KLGL NNP
Sbjct: 1 MQLQSLKKNVVRTV------AANKRAAEQSCLSLLEACDARCKFVQLQAHILKLGLRNNP 60
Query: 61 LVLTKFASISSFIHATDYAACFLFSAEADTRLYDAFLFNTLIRAYAQTGHSKDKALSLYG 120
LVLTKFA+ISS ++A DYA+ F+FS +AD+RLYDAFLFNT+IRAYAQTG K+KAL LY
Sbjct: 61 LVLTKFAAISSELNAVDYASSFVFSPDADSRLYDAFLFNTVIRAYAQTGDLKEKALVLYN 120
Query: 121 IMLHDGILPNKFTYPFVLKACAGLEVLNLGQSVHGSVVKFGFDRDIHVQNTMVHMYSCCA 180
ML G+LPNKFTYPF LKACAGL L+LGQ+VHGS VKFGFD D+HVQNTM+HMY CC
Sbjct: 121 AMLRCGVLPNKFTYPFALKACAGLGSLSLGQTVHGSAVKFGFDDDVHVQNTMIHMYCCCG 180
Query: 181 GGINSARKLFDEMPKSDSVTWSAMIGGYARVGRSTEAVALFREMQMAEVCPDEITMVSML 240
G+ ARK+FDEMPK DSV+WSAMIGGY R+G ST+AV LFR MQ+A V PDEITMVS+L
Sbjct: 181 SGVKYARKMFDEMPKRDSVSWSAMIGGYVRLGLSTDAVDLFRRMQIAGVHPDEITMVSVL 240
Query: 241 SACTDLGALELGKWIEAYIERQGIQKPVVVTNALIDMFAKCGDISKALKLFRTMNEKTIV 300
SACTDLGALELGKW+E+YIER+GIQK V + NALIDMFAKCGD+ KALKLFR M+ KTIV
Sbjct: 241 SACTDLGALELGKWVESYIEREGIQKNVELCNALIDMFAKCGDVDKALKLFRNMSGKTIV 300
Query: 301 SWTSVIVGMAMHGRGQEAICLFEEMIGSGVPPDGVAFIGLLSACSHSGLVERGREYFSSM 360
SWTSVIVG+AMHGRG EA+ LFEEMI +G PD VAFIGLLSACSHSGLV++G+ YFS M
Sbjct: 301 SWTSVIVGLAMHGRGSEAVSLFEEMIRNGTVPDNVAFIGLLSACSHSGLVDKGKGYFSLM 360
Query: 361 MKKYKLVPKIEHYGCMVDMYCRTGLVKEALEFVRNMPIEPNPVILRTLVSACRGHGEFKL 420
K+Y++VPK+EHYGCM DM CR GLV EA+ FV+ MP+EPNPVILRTLVSACR HG+ +L
Sbjct: 361 TKEYQIVPKMEHYGCMADMLCRAGLVNEAVAFVQKMPVEPNPVILRTLVSACRAHGKLRL 420
Query: 421 GEKITKLLMRHEPLHESNYVLLSNIYAKMLSWEKKTKIREVMEVKGMKKVPGSTMIEIDN 480
GE I+K L+ +EP HESNYVLLSNIYAKM WE KTKIR++M KGMKK PGSTMIE+DN
Sbjct: 421 GETISKSLISNEPTHESNYVLLSNIYAKMSRWENKTKIRKMMGKKGMKKTPGSTMIELDN 480
Query: 481 EIYEFVAGDKSHKQFKEIYEMVDEMGREMKKSGYRPSTSEVLLDINEEDKEDTLNRHSEK 540
EIYEFVAGDKSHKQ+KEIY+MVDEMGREMK++GY PSTSEVLLDI+EEDKED LNRHSEK
Sbjct: 481 EIYEFVAGDKSHKQYKEIYDMVDEMGREMKRAGYVPSTSEVLLDIDEEDKEDALNRHSEK 540
Query: 541 LAIAFGLLSTPPGTPIRIVKNLRVCNDCHSASKFISKIYDREIIMRDRNRFHHFKSGQCS 600
LAIAF LL+TPPGTPIRIVKNLRVC+DCHSA+KFISKIY+REI++RDRNRFHHF G CS
Sbjct: 541 LAIAFALLNTPPGTPIRIVKNLRVCSDCHSATKFISKIYNREIVVRDRNRFHHFMDGLCS 599
Query: 601 CGDFW 606
C DFW
Sbjct: 601 CKDFW 599
BLAST of Lsi08G011960 vs. TrEMBL
Match:
F6H313_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0008g05280 PE=4 SV=1)
HSP 1 Score: 882.9 bits (2280), Expect = 2.3e-253
Identity = 427/613 (69.66%), Postives = 506/613 (82.54%), Query Frame = 1
Query: 1 MQSQFTKTKLLRVINNVSASTT--------NPRAAEQNCLALLQACNALPKLTQIHTHII 60
M+ + K +LL IN TT N RA EQ CL +LQACN LPKL Q+HTHII
Sbjct: 1 MRFSYLKPRLLHSINTSKLKTTTLHHQSNMNHRAVEQPCLDILQACNTLPKLAQLHTHII 60
Query: 61 KLGLHNNPLVLTKFASISSFIHATDYAACFLFSAEADTRLYDAFLFNTLIRAYAQTGHSK 120
KLG NNPLVLTKF S SS + A YA +FS E D R+YDAFLF+T+IRAYA++ SK
Sbjct: 61 KLGFQNNPLVLTKFTSASSNLDAIPYAMSLVFSVE-DARVYDAFLFSTIIRAYAESSQSK 120
Query: 121 DKALSLYGIMLHDGILPNKFTYPFVLKACAGLEVLNLGQSVHGSVVKFGFDRDIHVQNTM 180
A+ Y +ML GI PNK+ +PFVLKACAGL LNLG++VHGS+VKFGFD DI VQNTM
Sbjct: 121 HNAIFYYNLMLGYGISPNKYAFPFVLKACAGLRDLNLGKAVHGSLVKFGFDDDIFVQNTM 180
Query: 181 VHMYSCCAGGINSARKLFDEMPKSDSVTWSAMIGGYARVGRSTEAVALFREMQMAEVCPD 240
VHMY CC+GG+ ARKLFDEMPK D VTW+AMIGGYAR+G+S AV LFR+MQ+A VCPD
Sbjct: 181 VHMYCCCSGGMEFARKLFDEMPKLDPVTWTAMIGGYARLGQSAGAVGLFRKMQIAGVCPD 240
Query: 241 EITMVSMLSACTDLGALELGKWIEAYIERQGIQKPVVVTNALIDMFAKCGDISKALKLFR 300
++TMVS+LSACTDLGALELGKWIE+YIE++ + K V ++NAL+DMFAKCGD+ KAL LFR
Sbjct: 241 DVTMVSVLSACTDLGALELGKWIESYIEKERVLKTVELSNALVDMFAKCGDVDKALGLFR 300
Query: 301 TMNEKTIVSWTSVIVGMAMHGRGQEAICLFEEMIGSGVPPDGVAFIGLLSACSHSGLVER 360
M+++TIVSWTSVIVG+AMHGRG EA+ LFEEM SG+ P+ +AFIGLLSACSHSGLVER
Sbjct: 301 NMSKRTIVSWTSVIVGLAMHGRGLEAVSLFEEMKASGMVPEDIAFIGLLSACSHSGLVER 360
Query: 361 GREYFSSMMKKYKLVPKIEHYGCMVDMYCRTGLVKEALEFVRNMPIEPNPVILRTLVSAC 420
GR+YFS M +++ +VPKIEHYGCMVD+ R GLV EALEFV MPIEPNP+I RTL+SAC
Sbjct: 361 GRQYFSEMTRQFGIVPKIEHYGCMVDLLSRAGLVTEALEFVERMPIEPNPIIWRTLISAC 420
Query: 421 RGHGEFKLGEKITKLLMRHEPLHESNYVLLSNIYAKMLSWEKKTKIREVMEVKGMKKVPG 480
R HGE KLGE I+K L+R+EP+HESNYVLLSNIY KML WEKK+KIR M KG++KVPG
Sbjct: 421 RVHGELKLGESISKQLIRNEPMHESNYVLLSNIYGKMLDWEKKSKIRVAMGKKGIQKVPG 480
Query: 481 STMIEIDNEIYEFVAGDKSHKQFKEIYEMVDEMGREMKKSGYRPSTSEVLLDINEEDKED 540
STMIE+DNEI+EF+ GD+SH Q+ EI +MV+EMGREMK++GY P+T+EV LDI+EEDKED
Sbjct: 481 STMIELDNEIHEFIVGDRSHNQYNEIIKMVNEMGREMKRAGYAPTTTEVFLDIDEEDKED 540
Query: 541 TLNRHSEKLAIAFGLLSTPPGTPIRIVKNLRVCNDCHSASKFISKIYDREIIMRDRNRFH 600
L+RHSEKLAIAF LL+TPPG+PIRI KNLRVC DCHSASKFISKIY+REI+MRDR+RFH
Sbjct: 541 ALSRHSEKLAIAFALLNTPPGSPIRITKNLRVCGDCHSASKFISKIYNREIVMRDRSRFH 600
Query: 601 HFKSGQCSCGDFW 606
HF+ GQCSCGDFW
Sbjct: 601 HFRDGQCSCGDFW 612
BLAST of Lsi08G011960 vs. TrEMBL
Match:
A0A067KBT2_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07178 PE=4 SV=1)
HSP 1 Score: 882.1 bits (2278), Expect = 3.9e-253
Identity = 422/585 (72.14%), Postives = 501/585 (85.64%), Query Frame = 1
Query: 21 TTNPRAAEQNCLALLQACNALPKLTQIHTHIIKLGLHNNPLVLTKFASISSFIHATDYAA 80
T N RAAEQ CLALLQ CN+L KLTQ+HT+I+K GL NNPLVLTK + SS +HA DYA+
Sbjct: 28 TGNRRAAEQKCLALLQDCNSLSKLTQVHTYILKSGLQNNPLVLTKLTATSSDLHAIDYAS 87
Query: 81 CFLFSAEADTRLYDAFLFNTLIRAYAQTGHSKDKALSLYGIMLHDGILPNKFTYPFVLKA 140
FLFS E+DT LYD FLFNT+IRAYAQT +SK A+ +Y +ML ILPNKFTYPFVLKA
Sbjct: 88 SFLFSPESDTGLYDTFLFNTIIRAYAQTNNSKVIAIFMYNLMLKYNILPNKFTYPFVLKA 147
Query: 141 CAGLEVLNLGQSVHGSVVKFGFDRDIHVQNTMVHMYSCCAGGINSARKLFDEMPKSDSVT 200
CAG+ L LG+SVHGSV+KFGF D+HVQNTMVHMY C G ARK+FDEM K DSV+
Sbjct: 148 CAGIGNLKLGKSVHGSVLKFGFADDVHVQNTMVHMYCCGKEGTEFARKVFDEMSKLDSVS 207
Query: 201 WSAMIGGYARVGRSTEAVALFREMQMAEVCPDEITMVSMLSACTDLGALELGKWIEAYIE 260
WSA+IGGYAR GRS++A+ LFR+MQ+A +CPDEITMVS+LSACTDLGALELGKW+E+YIE
Sbjct: 208 WSAIIGGYARFGRSSDAIDLFRQMQIAGICPDEITMVSVLSACTDLGALELGKWVESYIE 267
Query: 261 RQGIQKPVVVTNALIDMFAKCGDISKALKLFRTMNEKTIVSWTSVIVGMAMHGRGQEAIC 320
++ +QK V ++NALIDMFAKCGD+ KA+KLF+ M +TIVSWTSVIVG+AMHGRG EA+
Sbjct: 268 KEKVQKTVELSNALIDMFAKCGDVDKAIKLFKNMKHRTIVSWTSVIVGLAMHGRGVEAVE 327
Query: 321 LFEEMIGSGVPPDGVAFIGLLSACSHSGLVERGREYFSSMMKKYKLVPKIEHYGCMVDMY 380
LFEEMI SGV PD V+FIGLLSACSHSGLV++GR+YF +M + ++PKIEHYGCMVDM
Sbjct: 328 LFEEMIRSGVAPDDVSFIGLLSACSHSGLVDKGRDYFDNMKTNFGIIPKIEHYGCMVDML 387
Query: 381 CRTGLVKEALEFVRNMPIEPNPVILRTLVSACRGHGEFKLGEKITKLLMRHEPLHESNYV 440
CR G +K+AL+FV+ M IEPNPVI R L++ACR HGE KLGEK ++ L+ +EP+HESNYV
Sbjct: 388 CRAGQIKKALKFVQEMAIEPNPVIWRILINACRAHGELKLGEKFSRQLIGNEPMHESNYV 447
Query: 441 LLSNIYAKMLSWEKKTKIREVMEVKGMKKVPGSTMIEIDNEIYEFVAGDKSHKQFKEIYE 500
LLSNIYAKML+WEKK IRE+M+ KG++K+PGSTMIE+ NEIYEFVAGDKSH Q+KEIYE
Sbjct: 448 LLSNIYAKMLNWEKKMMIREMMDRKGIRKIPGSTMIELGNEIYEFVAGDKSHNQYKEIYE 507
Query: 501 MVDEMGREMKKSGYRPSTSEVLLDINEEDKEDTLNRHSEKLAIAFGLLSTPPGTPIRIVK 560
MVDEM R+MK++G+ P+TSEVLLDI+ EDKED+LN HSEKLAIAF LL+TPPGTPIRIVK
Sbjct: 508 MVDEMQRKMKQAGFVPTTSEVLLDIDNEDKEDSLNTHSEKLAIAFALLNTPPGTPIRIVK 567
Query: 561 NLRVCNDCHSASKFISKIYDREIIMRDRNRFHHFKSGQCSCGDFW 606
NLRVC DCHSA+KFIS+IY+REIIMRDRNRFHHF +G CSC DFW
Sbjct: 568 NLRVCTDCHSATKFISEIYNREIIMRDRNRFHHFNNGLCSCRDFW 612
BLAST of Lsi08G011960 vs. TrEMBL
Match:
A0A068UYV8_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00038456001 PE=4 SV=1)
HSP 1 Score: 878.6 bits (2269), Expect = 4.3e-252
Identity = 427/608 (70.23%), Postives = 503/608 (82.73%), Query Frame = 1
Query: 1 MQSQFTKTKLLRVINNVSA---STTNPRAAEQNCLALLQACNALPKLTQIHTHIIKLGLH 60
M S +KTKL R ++ + + + RAAEQNCLALL+ CN PKL+QIHTHI+KLGL
Sbjct: 1 MLSFISKTKLFRYLHTLPPPPKTASKKRAAEQNCLALLELCNNFPKLSQIHTHILKLGLQ 60
Query: 61 NNPLVLTKFASISSFIHATDYAACFLFSAEADTRLYDAFLFNTLIRAYAQTGHSKDKALS 120
NPLVLT+ AS SS ++A DYA+ F+FS +A T LYD FLFNT+IRAYAQT SK AL
Sbjct: 61 TNPLVLTRLASTSSDLNAIDYASSFIFSLDAKTHLYDTFLFNTVIRAYAQTKDSKQNALI 120
Query: 121 LYGIMLHDGILPNKFTYPFVLKACAGLEVLNLGQSVHGSVVKFGFDRDIHVQNTMVHMYS 180
Y IML D I PNKFTYPFVLKACAG+ L+LGQSVHGS VK+GF DIHV NTMVHMY
Sbjct: 121 YYKIMLKDCIFPNKFTYPFVLKACAGIGELSLGQSVHGSAVKYGFSDDIHVLNTMVHMYC 180
Query: 181 CCAGGINSARKLFDEMPKSDSVTWSAMIGGYARVGRSTEAVALFREMQMAEVCPDEITMV 240
C GGI RK+FDEMPK DSV+WSAMIGGYA++G S+EAV LFR+MQ+A V PDE+TMV
Sbjct: 181 SCGGGIEFGRKVFDEMPKCDSVSWSAMIGGYAKLGMSSEAVGLFRKMQIAGVRPDEVTMV 240
Query: 241 SMLSACTDLGALELGKWIEAYIERQGIQKPVVVTNALIDMFAKCGDISKALKLFRTMNEK 300
S+LSACTDLGALELGKW+ +YI+++ + K V + NALIDMF KCGD+ KALKLFR M EK
Sbjct: 241 SVLSACTDLGALELGKWVSSYIDKEKVPKSVELCNALIDMFVKCGDVDKALKLFRNMAEK 300
Query: 301 TIVSWTSVIVGMAMHGRGQEAICLFEEMIGSGVPPDGVAFIGLLSACSHSGLVERGREYF 360
IVSWTS+IVGMAMHGRG EAI LFE+M SG+ PD VAFIGLLSACSHSGLVE+GR+YF
Sbjct: 301 DIVSWTSLIVGMAMHGRGLEAISLFEDMRSSGIVPDDVAFIGLLSACSHSGLVEKGRQYF 360
Query: 361 SSMMKKYKLVPKIEHYGCMVDMYCRTGLVKEALEFVRNMPIEPNPVILRTLVSACRGHGE 420
M+K++++VPKIEHYGCMVD+ R GLVK+ALEFV +MPIEPNP+ILR L++ACR HGE
Sbjct: 361 DLMLKEFRIVPKIEHYGCMVDLLSRAGLVKDALEFVESMPIEPNPIILRALITACRAHGE 420
Query: 421 FKLGEKITKLLMRHEPLHESNYVLLSNIYAKMLSWEKKTKIREVMEVKGMKKVPGSTMIE 480
KL E +T+ L++ EP+ ESNYVLLSNIYA L+WEKKT IREVM KG++K PGSTM E
Sbjct: 421 LKLSESMTRKLIKQEPMLESNYVLLSNIYAISLNWEKKTTIREVMGKKGIRKTPGSTMFE 480
Query: 481 IDNEIYEFVAGDKSHKQFKEIYEMVDEMGREMKKSGYRPSTSEVLLDINEEDKEDTLNRH 540
+DNEIYEFVAGDK+H ++KEIYEM+DEMG+EM+++GY +TSEVLLDI+EEDKED LNRH
Sbjct: 481 LDNEIYEFVAGDKTHNEYKEIYEMLDEMGKEMRRAGYVATTSEVLLDIDEEDKEDALNRH 540
Query: 541 SEKLAIAFGLLSTPPGTPIRIVKNLRVCNDCHSASKFISKIYDREIIMRDRNRFHHFKSG 600
SEKLAIAF LL TPPGT IRIVKNLRVC DCH+A+KFISKIY+REI++RDRNRFHHF G
Sbjct: 541 SEKLAIAFALLKTPPGTSIRIVKNLRVCEDCHTATKFISKIYNREIVVRDRNRFHHFIDG 600
Query: 601 QCSCGDFW 606
CSC DFW
Sbjct: 601 LCSCKDFW 608
BLAST of Lsi08G011960 vs. TAIR10
Match:
AT4G21065.1 (AT4G21065.1 Tetratricopeptide repeat (TPR)-like superfamily protein)
HSP 1 Score: 503.8 bits (1296), Expect = 1.4e-142
Identity = 256/584 (43.84%), Postives = 388/584 (66.44%), Query Frame = 1
Query: 29 QNCLALLQA--CNALPKLTQIHTHIIKLGLHNNPLVLTKFASISSFIHATDYAACFLFSA 88
+ C+ LLQ +++ KL QIH I+ G+ + L K + ++ + ++
Sbjct: 16 EKCINLLQTYGVSSITKLRQIHAFSIRHGVSISDAELGKH--LIFYLVSLPSPPPMSYAH 75
Query: 89 EADTRL---YDAFLFNTLIRAYAQTGHSKDKALSLYGIMLHDGIL-PNKFTYPFVLKACA 148
+ +++ + F++NTLIR YA+ G+S A SLY M G++ P+ TYPF++KA
Sbjct: 76 KVFSKIEKPINVFIWNTLIRGYAEIGNSIS-AFSLYREMRVSGLVEPDTHTYPFLIKAVT 135
Query: 149 GLEVLNLGQSVHGSVVKFGFDRDIHVQNTMVHMYSCCAGGINSARKLFDEMPKSDSVTWS 208
+ + LG+++H V++ GF I+VQN+++H+Y+ C G + SA K+FD+MP+ D V W+
Sbjct: 136 TMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANC-GDVASAYKVFDKMPEKDLVAWN 195
Query: 209 AMIGGYARVGRSTEAVALFREMQMAEVCPDEITMVSMLSACTDLGALELGKWIEAYIERQ 268
++I G+A G+ EA+AL+ EM + PD T+VS+LSAC +GAL LGK + Y+ +
Sbjct: 196 SVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKV 255
Query: 269 GIQKPVVVTNALIDMFAKCGDISKALKLFRTMNEKTIVSWTSVIVGMAMHGRGQEAICLF 328
G+ + + +N L+D++A+CG + +A LF M +K VSWTS+IVG+A++G G+EAI LF
Sbjct: 256 GLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELF 315
Query: 329 EEMIGS-GVPPDGVAFIGLLSACSHSGLVERGREYFSSMMKKYKLVPKIEHYGCMVDMYC 388
+ M + G+ P + F+G+L ACSH G+V+ G EYF M ++YK+ P+IEH+GCMVD+
Sbjct: 316 KYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLA 375
Query: 389 RTGLVKEALEFVRNMPIEPNPVILRTLVSACRGHGEFKLGEKITKLLMRHEPLHESNYVL 448
R G VK+A E++++MP++PN VI RTL+ AC HG+ L E +++ EP H +YVL
Sbjct: 376 RAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVL 435
Query: 449 LSNIYAKMLSWEKKTKIREVMEVKGMKKVPGSTMIEIDNEIYEFVAGDKSHKQFKEIYEM 508
LSN+YA W KIR+ M G+KKVPG +++E+ N ++EF+ GDKSH Q IY
Sbjct: 436 LSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAK 495
Query: 509 VDEMGREMKKSGYRPSTSEVLLDINEEDKEDTLNRHSEKLAIAFGLLSTPPGTPIRIVKN 568
+ EM ++ GY P S V +D+ EE+KE+ + HSEK+AIAF L+STP +PI +VKN
Sbjct: 496 LKEMTGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKN 555
Query: 569 LRVCNDCHSASKFISKIYDREIIMRDRNRFHHFKSGQCSCGDFW 606
LRVC DCH A K +SK+Y+REI++RDR+RFHHFK+G CSC D+W
Sbjct: 556 LRVCADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595
BLAST of Lsi08G011960 vs. TAIR10
Match:
AT2G02980.1 (AT2G02980.1 Pentatricopeptide repeat (PPR) superfamily protein)
HSP 1 Score: 500.0 bits (1286), Expect = 2.1e-141
Identity = 253/580 (43.62%), Postives = 381/580 (65.69%), Query Frame = 1
Query: 29 QNCLALLQACNALPKLTQIHTHIIKLGLHNNPLV--LTKFASISSFIHATDYAACFLFSA 88
QN + L+ CN+L +L QI + IK + + V L F + S + YA LF A
Sbjct: 30 QNPILLISKCNSLRELMQIQAYAIKSHIEDVSFVAKLINFCTESPTESSMSYAR-HLFEA 89
Query: 89 EADTRLYDAFLFNTLIRAYAQTGHSKDKALSLYGIMLHDGILPNKFTYPFVLKACAGLEV 148
++ D +FN++ R Y++ + + SL+ +L DGILP+ +T+P +LKACA +
Sbjct: 90 MSEP---DIVIFNSMARGYSRFTNPLE-VFSLFVEILEDGILPDNYTFPSLLKACAVAKA 149
Query: 149 LNLGQSVHGSVVKFGFDRDIHVQNTMVHMYSCCAGGINSARKLFDEMPKSDSVTWSAMIG 208
L G+ +H +K G D +++V T+++MY+ C ++SAR +FD + + V ++AMI
Sbjct: 150 LEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECED-VDSARCVFDRIVEPCVVCYNAMIT 209
Query: 209 GYARVGRSTEAVALFREMQMAEVCPDEITMVSMLSACTDLGALELGKWIEAYIERQGIQK 268
GYAR R EA++LFREMQ + P+EIT++S+LS+C LG+L+LGKWI Y ++ K
Sbjct: 210 GYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCK 269
Query: 269 PVVVTNALIDMFAKCGDISKALKLFRTMNEKTIVSWTSVIVGMAMHGRGQEAICLFEEMI 328
V V ALIDMFAKCG + A+ +F M K +W+++IV A HG+ ++++ +FE M
Sbjct: 270 YVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMR 329
Query: 329 GSGVPPDGVAFIGLLSACSHSGLVERGREYFSSMMKKYKLVPKIEHYGCMVDMYCRTGLV 388
V PD + F+GLL+ACSH+G VE GR+YFS M+ K+ +VP I+HYG MVD+ R G +
Sbjct: 330 SENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNL 389
Query: 389 KEALEFVRNMPIEPNPVILRTLVSACRGHGEFKLGEKITKLLMRHEPLHESNYVLLSNIY 448
++A EF+ +PI P P++ R L++AC H L EK+++ + + H +YV+LSN+Y
Sbjct: 390 EDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLY 449
Query: 449 AKMLSWEKKTKIREVMEVKGMKKVPGSTMIEIDNEIYEFVAGDKSHKQFKEIYEMVDEMG 508
A+ WE +R+VM+ + KVPG + IE++N ++EF +GD +++ +DEM
Sbjct: 450 ARNKKWEYVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEMV 509
Query: 509 REMKKSGYRPSTSEVL-LDINEEDKEDTLNRHSEKLAIAFGLLSTPPGTPIRIVKNLRVC 568
+E+K SGY P TS V+ ++N+++KE TL HSEKLAI FGLL+TPPGT IR+VKNLRVC
Sbjct: 510 KELKLSGYVPDTSMVVHANMNDQEKEITLRYHSEKLAITFGLLNTPPGTTIRVVKNLRVC 569
Query: 569 NDCHSASKFISKIYDREIIMRDRNRFHHFKSGQCSCGDFW 606
DCH+A+K IS I+ R++++RD RFHHF+ G+CSCGDFW
Sbjct: 570 RDCHNAAKLISLIFGRKVVLRDVQRFHHFEDGKCSCGDFW 603
BLAST of Lsi08G011960 vs. TAIR10
Match:
AT1G08070.1 (AT1G08070.1 Tetratricopeptide repeat (TPR)-like superfamily protein)
HSP 1 Score: 490.7 bits (1262), Expect = 1.3e-138
Identity = 237/514 (46.11%), Postives = 343/514 (66.73%), Query Frame = 1
Query: 94 DAFLFNTLIRAYAQTGHSKDKALSLYGIMLHDGILPNKFTYPFVLKACAGLEVLNLGQSV 153
D +N +I YA+TG+ K+ AL L+ M+ + P++ T V+ ACA + LG+ V
Sbjct: 230 DVVSWNAMISGYAETGNYKE-ALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQV 289
Query: 154 HGSVVKFGFDRDIHVQNTMVHMYSCCAGGINSARKLFDEMPKSDSVTWSAMIGGYARVGR 213
H + GF ++ + N ++ +YS C G + +A LF+ +P D ++W+ +IGGY +
Sbjct: 290 HLWIDDHGFGSNLKIVNALIDLYSKC-GELETACGLFERLPYKDVISWNTLIGGYTHMNL 349
Query: 214 STEAVALFREMQMAEVCPDEITMVSMLSACTDLGALELGKWIEAYIERQ--GIQKPVVVT 273
EA+ LF+EM + P+++TM+S+L AC LGA+++G+WI YI+++ G+ +
Sbjct: 350 YKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLR 409
Query: 274 NALIDMFAKCGDISKALKLFRTMNEKTIVSWTSVIVGMAMHGRGQEAICLFEEMIGSGVP 333
+LIDM+AKCGDI A ++F ++ K++ SW ++I G AMHGR + LF M G+
Sbjct: 410 TSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQ 469
Query: 334 PDGVAFIGLLSACSHSGLVERGREYFSSMMKKYKLVPKIEHYGCMVDMYCRTGLVKEALE 393
PD + F+GLLSACSHSG+++ GR F +M + YK+ PK+EHYGCM+D+ +GL KEA E
Sbjct: 470 PDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEE 529
Query: 394 FVRNMPIEPNPVILRTLVSACRGHGEFKLGEKITKLLMRHEPLHESNYVLLSNIYAKMLS 453
+ M +EP+ VI +L+ AC+ HG +LGE + L++ EP + +YVLLSNIYA
Sbjct: 530 MINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGR 589
Query: 454 WEKKTKIREVMEVKGMKKVPGSTMIEIDNEIYEFVAGDKSHKQFKEIYEMVDEMGREMKK 513
W + K R ++ KGMKKVPG + IEID+ ++EF+ GDK H + +EIY M++EM ++K
Sbjct: 590 WNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEK 649
Query: 514 SGYRPSTSEVLLDINEEDKEDTLNRHSEKLAIAFGLLSTPPGTPIRIVKNLRVCNDCHSA 573
+G+ P TSEVL ++ EE KE L HSEKLAIAFGL+ST PGT + IVKNLRVC +CH A
Sbjct: 650 AGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEA 709
Query: 574 SKFISKIYDREIIMRDRNRFHHFKSGQCSCGDFW 606
+K ISKIY REII RDR RFHHF+ G CSC D+W
Sbjct: 710 TKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741
BLAST of Lsi08G011960 vs. TAIR10
Match:
AT5G66520.1 (AT5G66520.1 Tetratricopeptide repeat (TPR)-like superfamily protein)
HSP 1 Score: 476.9 bits (1226), Expect = 1.9e-134
Identity = 236/605 (39.01%), Postives = 372/605 (61.49%), Query Frame = 1
Query: 32 LALLQACNALPKLTQIHTHIIKLGLHNNPLVLTKFASISSFIHATDYAACFLFSAEADTR 91
++ LQ C+ +L QIH ++K GL + +TKF S ++D+ + R
Sbjct: 18 MSCLQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDR 77
Query: 92 LYDAFLFNTLIRAYAQTGHSKDKALSLYGIMLHDGILPNKFTYPFVLKACAGLEVLNLGQ 151
D FL+N +IR ++ +++L LY ML N +T+P +LKAC+ L
Sbjct: 78 P-DTFLWNLMIRGFS-CSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETT 137
Query: 152 SVHGSVVKFGFDRDIHVQNTMVHMYSCC------------------------------AG 211
+H + K G++ D++ N++++ Y+ AG
Sbjct: 138 QIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAG 197
Query: 212 GINSARKLFDEMPKSDSVTWSAMIGGYARVGRSTEAVALFREMQMAEVCPDEITMVSMLS 271
++ A LF +M + ++++W+ MI GY + + EA+ LF EMQ ++V PD +++ + LS
Sbjct: 198 KMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALS 257
Query: 272 ACTDLGALELGKWIEAYIERQGIQKPVVVTNALIDMFAKCGDISKALKLFRTMNEKTIVS 331
AC LGALE GKWI +Y+ + I+ V+ LIDM+AKCG++ +AL++F+ + +K++ +
Sbjct: 258 ACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQA 317
Query: 332 WTSVIVGMAMHGRGQEAICLFEEMIGSGVPPDGVAFIGLLSACSHSGLVERGREYFSSMM 391
WT++I G A HG G+EAI F EM G+ P+ + F +L+ACS++GLVE G+ F SM
Sbjct: 318 WTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSME 377
Query: 392 KKYKLVPKIEHYGCMVDMYCRTGLVKEALEFVRNMPIEPNPVILRTLVSACRGHGEFKLG 451
+ Y L P IEHYGC+VD+ R GL+ EA F++ MP++PN VI L+ ACR H +LG
Sbjct: 378 RDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELG 437
Query: 452 EKITKLLMRHEPLHESNYVLLSNIYAKMLSWEKKTKIREVMEVKGMKKVPGSTMIEIDNE 511
E+I ++L+ +P H YV +NI+A W+K + R +M+ +G+ KVPG + I ++
Sbjct: 438 EEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGT 497
Query: 512 IYEFVAGDKSHKQFKEIYEMVDEMGREMKKSGYRPSTSEVLLD-INEEDKEDTLNRHSEK 571
+EF+AGD+SH + ++I M R+++++GY P E+LLD ++++++E +++HSEK
Sbjct: 498 THEFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLLDLVDDDEREAIVHQHSEK 557
Query: 572 LAIAFGLLSTPPGTPIRIVKNLRVCNDCHSASKFISKIYDREIIMRDRNRFHHFKSGQCS 606
LAI +GL+ T PGT IRI+KNLRVC DCH +K ISKIY R+I+MRDR RFHHF+ G+CS
Sbjct: 558 LAITYGLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDRTRFHHFRDGKCS 617
BLAST of Lsi08G011960 vs. TAIR10
Match:
AT1G31920.1 (AT1G31920.1 Tetratricopeptide repeat (TPR)-like superfamily protein)
HSP 1 Score: 469.2 bits (1206), Expect = 3.9e-132
Identity = 235/584 (40.24%), Postives = 377/584 (64.55%), Query Frame = 1
Query: 28 EQNCLALLQACNALPKLTQIHTHIIKLGLHNNPL-----VLTKFASISSFIHATDYAACF 87
EQ CL LL+ C+ + + Q+H IKL L + VL K A S + ++ +YAA
Sbjct: 30 EQECLYLLKRCHNIDEFKQVHARFIKLSLFYSSSFSASSVLAKCAH-SGWENSMNYAAS- 89
Query: 88 LFSAEADTRLYDAFLFNTLIRAYAQTGHSKDKALSLYGIMLHDGILPNKFTYPFVLKACA 147
+F D +D FNT+IR Y S ++AL Y M+ G P+ FTYP +LKAC
Sbjct: 90 IFRGIDDPCTFD---FNTMIRGYVNV-MSFEEALCFYNEMMQRGNEPDNFTYPCLLKACT 149
Query: 148 GLEVLNLGQSVHGSVVKFGFDRDIHVQNTMVHMYSCCAGGINSARKLFDEMPKSDSVTWS 207
L+ + G+ +HG V K G + D+ VQN++++MY C G + + +F+++ + +WS
Sbjct: 150 RLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRC-GEMELSSAVFEKLESKTAASWS 209
Query: 208 AMIGGYARVGRSTEAVALFREM-QMAEVCPDEITMVSMLSACTDLGALELGKWIEAYIER 267
+M+ A +G +E + LFR M + +E MVS L AC + GAL LG I ++ R
Sbjct: 210 SMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLR 269
Query: 268 QGIQKPVVVTNALIDMFAKCGDISKALKLFRTMNEKTIVSWTSVIVGMAMHGRGQEAICL 327
+ ++V +L+DM+ KCG + KAL +F+ M ++ ++++++I G+A+HG G+ A+ +
Sbjct: 270 NISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRM 329
Query: 328 FEEMIGSGVPPDGVAFIGLLSACSHSGLVERGREYFSSMMKKYKLVPKIEHYGCMVDMYC 387
F +MI G+ PD V ++ +L+ACSHSGLV+ GR F+ M+K+ K+ P EHYGC+VD+
Sbjct: 330 FSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLG 389
Query: 388 RTGLVKEALEFVRNMPIEPNPVILRTLVSACRGHGEFKLGEKITKLLMRHEPLHESNYVL 447
R GL++EALE ++++PIE N VI RT +S CR +LG+ + L++ + +Y+L
Sbjct: 390 RAGLLEEALETIQSIPIEKNDVIWRTFLSQCRVRQNIELGQIAAQELLKLSSHNPGDYLL 449
Query: 448 LSNIYAKMLSWEKKTKIREVMEVKGMKKVPGSTMIEIDNEIYEFVAGDKSHKQFKEIYEM 507
+SN+Y++ W+ + R + +KG+K+ PG +++E+ + + FV+ D+SH + KEIY+M
Sbjct: 450 ISNLYSQGQMWDDVARTRTEIAIKGLKQTPGFSIVELKGKTHRFVSQDRSHPKCKEIYKM 509
Query: 508 VDEMGREMKKSGYRPSTSEVLLDINEEDKEDTLNRHSEKLAIAFGLLSTPPGTPIRIVKN 567
+ +M ++K GY P +++LL+++EE+K++ L HS+K+AIAFGLL TPPG+ I+I +N
Sbjct: 510 LHQMEWQLKFEGYSPDLTQILLNVDEEEKKERLKGHSQKVAIAFGLLYTPPGSIIKIARN 569
Query: 568 LRVCNDCHSASKFISKIYDREIIMRDRNRFHHFKSGQCSCGDFW 606
LR+C+DCH+ +K IS IY+REI++RDRNRFH FK G CSC D+W
Sbjct: 570 LRMCSDCHTYTKKISMIYEREIVVRDRNRFHLFKGGTCSCKDYW 606
BLAST of Lsi08G011960 vs. NCBI nr
Match:
gi|659088860|ref|XP_008445200.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g21065-like [Cucumis melo])
HSP 1 Score: 1163.3 bits (3008), Expect = 0.0e+00
Identity = 578/606 (95.38%), Postives = 587/606 (96.86%), Query Frame = 1
Query: 1 MQSQFTKTKLLRVINNVSAS-TTNPRAAEQNCLALLQACNALPKLTQIHTHIIKLGLHNN 60
MQSQFTK KLLR INNV AS TTNPRAAEQNCLALLQACNALPKLTQIHTHI+KLGLHNN
Sbjct: 1 MQSQFTKPKLLRTINNVLASSTTNPRAAEQNCLALLQACNALPKLTQIHTHIVKLGLHNN 60
Query: 61 PLVLTKFASISSFIHATDYAACFLFSAEADTRLYDAFLFNTLIRAYAQTGHSKDKALSLY 120
PLVLTKFASISS IHATDYAA FLFSAEADTRLYDAFLFNTLIRAYAQTGHSKDKAL+LY
Sbjct: 61 PLVLTKFASISSLIHATDYAASFLFSAEADTRLYDAFLFNTLIRAYAQTGHSKDKALALY 120
Query: 121 GIMLHDGILPNKFTYPFVLKACAGLEVLNLGQSVHGSVVKFGFDRDIHVQNTMVHMYSCC 180
GIMLHDGILPNKFTYPFVLKACAGLEVLNLGQSVHGSVVKFGFD DIHVQNTMVHMYSCC
Sbjct: 121 GIMLHDGILPNKFTYPFVLKACAGLEVLNLGQSVHGSVVKFGFDCDIHVQNTMVHMYSCC 180
Query: 181 AGGINSARKLFDEMPKSDSVTWSAMIGGYARVGRSTEAVALFREMQMAEVCPDEITMVSM 240
AGGINSARK+FDEMPKSDSVTWSAMIGGYARVGRSTEAVALFREMQMAEVCPDEITMVSM
Sbjct: 181 AGGINSARKVFDEMPKSDSVTWSAMIGGYARVGRSTEAVALFREMQMAEVCPDEITMVSM 240
Query: 241 LSACTDLGALELGKWIEAYIERQGIQKPVVVTNALIDMFAKCGDISKALKLFRTMNEKTI 300
LSACTDLGALELGKWIEAYIER GI KPV V+NALIDMFAKCGDISKALKLFR MNEKTI
Sbjct: 241 LSACTDLGALELGKWIEAYIERHGIHKPVEVSNALIDMFAKCGDISKALKLFRAMNEKTI 300
Query: 301 VSWTSVIVGMAMHGRGQEAICLFEEMIGSGVPPDGVAFIGLLSACSHSGLVERGREYFSS 360
VSWTSVIVGMAMHGRG+EA CLFEEMI SGV PD VAFIGLLSACSHSGLVERGREYF S
Sbjct: 301 VSWTSVIVGMAMHGRGREATCLFEEMITSGVAPDDVAFIGLLSACSHSGLVERGREYFGS 360
Query: 361 MMKKYKLVPKIEHYGCMVDMYCRTGLVKEALEFVRNMPIEPNPVILRTLVSACRGHGEFK 420
MMKKYKLVPKIEHYGCMVDMYCRTGLVKEALEFVRNMPIEPNPVILRTLV+ACRGHGEFK
Sbjct: 361 MMKKYKLVPKIEHYGCMVDMYCRTGLVKEALEFVRNMPIEPNPVILRTLVTACRGHGEFK 420
Query: 421 LGEKITKLLMRHEPLHESNYVLLSNIYAKMLSWEKKTKIREVMEVKGMKKVPGSTMIEID 480
LGEKITKLLM+HEPLHESNYVLLSNIYAK LSWEKKTKIREVMEVKGMKKVPGSTMIEID
Sbjct: 421 LGEKITKLLMKHEPLHESNYVLLSNIYAKTLSWEKKTKIREVMEVKGMKKVPGSTMIEID 480
Query: 481 NEIYEFVAGDKSHKQFKEIYEMVDEMGREMKKSGYRPSTSEVLLDINEEDKEDTLNRHSE 540
NEIYEFVAGDKSHKQ KEIYEMVDEMGREMKKSGYRPSTSEVLLDINEEDKED+LNRHSE
Sbjct: 481 NEIYEFVAGDKSHKQHKEIYEMVDEMGREMKKSGYRPSTSEVLLDINEEDKEDSLNRHSE 540
Query: 541 KLAIAFGLLSTPPGTPIRIVKNLRVCNDCHSASKFISKIYDREIIMRDRNRFHHFKSGQC 600
KLAIAFGLL TPPGTPIRIVKNLRVC+DCHSASKFISKIYDREIIMRDRNRFHHFKSGQC
Sbjct: 541 KLAIAFGLLRTPPGTPIRIVKNLRVCSDCHSASKFISKIYDREIIMRDRNRFHHFKSGQC 600
Query: 601 SCGDFW 606
SCGDFW
Sbjct: 601 SCGDFW 606
BLAST of Lsi08G011960 vs. NCBI nr
Match:
gi|449442178|ref|XP_004138859.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g21065-like [Cucumis sativus])
HSP 1 Score: 1154.4 bits (2985), Expect = 0.0e+00
Identity = 574/606 (94.72%), Postives = 583/606 (96.20%), Query Frame = 1
Query: 1 MQSQFTKTKLLRVINNVSASTT-NPRAAEQNCLALLQACNALPKLTQIHTHIIKLGLHNN 60
MQSQFTK KLLR INNV AS+T NPRA EQNCLALLQACNALPKLTQIHTHI+KLGLHNN
Sbjct: 1 MQSQFTKPKLLRTINNVLASSTPNPRAPEQNCLALLQACNALPKLTQIHTHILKLGLHNN 60
Query: 61 PLVLTKFASISSFIHATDYAACFLFSAEADTRLYDAFLFNTLIRAYAQTGHSKDKALSLY 120
PLVLTKFASISS IHATDYAA FLFSAEADTRLYDAFLFNTLIRAYAQTGHSKDKAL+LY
Sbjct: 61 PLVLTKFASISSLIHATDYAASFLFSAEADTRLYDAFLFNTLIRAYAQTGHSKDKALALY 120
Query: 121 GIMLHDGILPNKFTYPFVLKACAGLEVLNLGQSVHGSVVKFGFDRDIHVQNTMVHMYSCC 180
GIMLHD ILPNKFTYPFVLKACAGLEVLNLGQ+VHGSVVKFGFD DIHVQNTMVHMYSCC
Sbjct: 121 GIMLHDAILPNKFTYPFVLKACAGLEVLNLGQTVHGSVVKFGFDCDIHVQNTMVHMYSCC 180
Query: 181 AGGINSARKLFDEMPKSDSVTWSAMIGGYARVGRSTEAVALFREMQMAEVCPDEITMVSM 240
AGGINSARK+FDEMPKSDSVTWSAMIGGYARVGRSTEAVALFREMQMAEVCPDEITMVSM
Sbjct: 181 AGGINSARKVFDEMPKSDSVTWSAMIGGYARVGRSTEAVALFREMQMAEVCPDEITMVSM 240
Query: 241 LSACTDLGALELGKWIEAYIERQGIQKPVVVTNALIDMFAKCGDISKALKLFRTMNEKTI 300
LSACTDLGALELGKWIEAYIER I KPV V+NALIDMFAKCGDISKALKLFR MNEKTI
Sbjct: 241 LSACTDLGALELGKWIEAYIERHEIHKPVEVSNALIDMFAKCGDISKALKLFRAMNEKTI 300
Query: 301 VSWTSVIVGMAMHGRGQEAICLFEEMIGSGVPPDGVAFIGLLSACSHSGLVERGREYFSS 360
VSWTSVIVGMAMHGRGQEA CLFEEM SGV PD VAFIGLLSACSHSGLVERGREYF S
Sbjct: 301 VSWTSVIVGMAMHGRGQEATCLFEEMTSSGVAPDDVAFIGLLSACSHSGLVERGREYFGS 360
Query: 361 MMKKYKLVPKIEHYGCMVDMYCRTGLVKEALEFVRNMPIEPNPVILRTLVSACRGHGEFK 420
MMKKYKLVPKIEHYGCMVDMYCRTGLVKEALEFVRNMPIEPNPVILRTLVSACRGHGEFK
Sbjct: 361 MMKKYKLVPKIEHYGCMVDMYCRTGLVKEALEFVRNMPIEPNPVILRTLVSACRGHGEFK 420
Query: 421 LGEKITKLLMRHEPLHESNYVLLSNIYAKMLSWEKKTKIREVMEVKGMKKVPGSTMIEID 480
LGEKITKLLM+HEPLHESNYVLLSNIYAK LSWEKKTKIREVMEVKGMKKVPGSTMIEID
Sbjct: 421 LGEKITKLLMKHEPLHESNYVLLSNIYAKTLSWEKKTKIREVMEVKGMKKVPGSTMIEID 480
Query: 481 NEIYEFVAGDKSHKQFKEIYEMVDEMGREMKKSGYRPSTSEVLLDINEEDKEDTLNRHSE 540
NEIYEFVAGDKSHKQ KEIYEMVDEMGREMKKSGYRPSTSEVLLDINEEDKED+LNRHSE
Sbjct: 481 NEIYEFVAGDKSHKQHKEIYEMVDEMGREMKKSGYRPSTSEVLLDINEEDKEDSLNRHSE 540
Query: 541 KLAIAFGLLSTPPGTPIRIVKNLRVCNDCHSASKFISKIYDREIIMRDRNRFHHFKSGQC 600
KLAIAFGLL TPPGTPIRIVKNLRVC+DCHSASKFISKIYDREIIMRDRNRFHHFKSGQC
Sbjct: 541 KLAIAFGLLRTPPGTPIRIVKNLRVCSDCHSASKFISKIYDREIIMRDRNRFHHFKSGQC 600
Query: 601 SCGDFW 606
SCGDFW
Sbjct: 601 SCGDFW 606
BLAST of Lsi08G011960 vs. NCBI nr
Match:
gi|645225671|ref|XP_008219679.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g21065-like [Prunus mume])
HSP 1 Score: 950.7 bits (2456), Expect = 1.3e-273
Identity = 454/599 (75.79%), Postives = 523/599 (87.31%), Query Frame = 1
Query: 7 KTKLLRVINNVSASTTNPRAAEQNCLALLQACNALPKLTQIHTHIIKLGLHNNPLVLTKF 66
++KL+ +A N R AEQ+CLALLQAC+A+PKL Q+H H++KLGL NNPLVLTKF
Sbjct: 8 RSKLIVPALKTTAIAANKREAEQSCLALLQACDAVPKLAQLHGHVLKLGLRNNPLVLTKF 67
Query: 67 ASISSFIHATDYAACFLFSAEADTRLYDAFLFNTLIRAYAQTGHSKDKALSLYGIMLHDG 126
S +S + A DYA+ FLF+ +ADT LYD+FLFNT+IRAYAQT H K KAL LY +ML
Sbjct: 68 TSTASDLKAIDYASSFLFAPDADTHLYDSFLFNTIIRAYAQTSHGKHKALCLYNVMLEGA 127
Query: 127 ILPNKFTYPFVLKACAGLEVLNLGQSVHGSVVKFGFDRDIHVQNTMVHMYSCCAGGINSA 186
+LPNKFTYPFVLKACAGL LNLG SVHGSVVKFGFD D+HV NTMVHMY CC+GGI SA
Sbjct: 128 VLPNKFTYPFVLKACAGLGDLNLGTSVHGSVVKFGFDDDVHVCNTMVHMYCCCSGGIESA 187
Query: 187 RKLFDEMPKSDSVTWSAMIGGYARVGRSTEAVALFREMQMAEVCPDEITMVSMLSACTDL 246
RK+FDEMPK DSV+WSAMIGGY RVG ST+AV LFREMQM V PDEITMVS+LSACTDL
Sbjct: 188 RKVFDEMPKLDSVSWSAMIGGYVRVGWSTDAVDLFREMQMVGVRPDEITMVSVLSACTDL 247
Query: 247 GALELGKWIEAYIERQGIQKPVVVTNALIDMFAKCGDISKALKLFRTMNEKTIVSWTSVI 306
GALELGKW+E+YI+++GIQK V ++NALIDMF+KCGD+ KALKLFR MN +TIVSWTSVI
Sbjct: 248 GALELGKWVESYIDKEGIQKTVELSNALIDMFSKCGDVEKALKLFRNMNGRTIVSWTSVI 307
Query: 307 VGMAMHGRGQEAICLFEEMIGSGVPPDGVAFIGLLSACSHSGLVERGREYFSSMMKKYKL 366
G+AMHGRG EA+ LFEEMIG+GV PD VAFIGL SACSHSGLVE+G+ YFSSM++K+ +
Sbjct: 308 DGLAMHGRGMEAMSLFEEMIGTGVAPDDVAFIGLFSACSHSGLVEKGKSYFSSMVEKFHI 367
Query: 367 VPKIEHYGCMVDMYCRTGLVKEALEFVRNMPIEPNPVILRTLVSACRGHGEFKLGEKITK 426
VPKIEHYGCMVDM CR GLVKEALEF++ MPIEPNP++LRTL+SACR HGE KLGE ITK
Sbjct: 368 VPKIEHYGCMVDMLCRAGLVKEALEFIQKMPIEPNPIVLRTLISACRAHGELKLGESITK 427
Query: 427 LLMRHEPLHESNYVLLSNIYAKMLSWEKKTKIREVMEVKGMKKVPGSTMIEIDNEIYEFV 486
L+R+EP+ ESNYVLLSNIYAKM WEKK KIREVM+ +GMKK+PGSTMIE+D+EIYEFV
Sbjct: 428 ELIRNEPMQESNYVLLSNIYAKMTHWEKKAKIREVMDKRGMKKIPGSTMIELDHEIYEFV 487
Query: 487 AGDKSHKQFKEIYEMVDEMGREMKKSGYRPSTSEVLLDINEEDKEDTLNRHSEKLAIAFG 546
AGDKSHKQ+K+IYEMVDEMGREMK +GY P+TSE+LLDI+EEDKED LNRHSEKLAIAF
Sbjct: 488 AGDKSHKQYKQIYEMVDEMGREMKSAGYVPTTSEILLDIDEEDKEDALNRHSEKLAIAFA 547
Query: 547 LLSTPPGTPIRIVKNLRVCNDCHSASKFISKIYDREIIMRDRNRFHHFKSGQCSCGDFW 606
LL+TPPGTPIRIVKNLRVC+DCHSA+KFISKIY+REI++RDRNRFHHFK G CSC DFW
Sbjct: 548 LLNTPPGTPIRIVKNLRVCDDCHSATKFISKIYNREIVVRDRNRFHHFKDGMCSCRDFW 606
BLAST of Lsi08G011960 vs. NCBI nr
Match:
gi|1009137110|ref|XP_015885877.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g21065-like [Ziziphus jujuba])
HSP 1 Score: 943.3 bits (2437), Expect = 2.0e-271
Identity = 454/606 (74.92%), Postives = 525/606 (86.63%), Query Frame = 1
Query: 1 MQSQFTKTKLLRVIN-NVSASTTNPRAAEQNCLALLQACNALPKLTQIHTHIIKLGLHNN 60
MQ KL+R +N + + +T N RAAEQ+CL+LLQACN + K+ Q+H I+KLGL NN
Sbjct: 1 MQFPTIAAKLIRTVNASTTRTTNNNRAAEQSCLSLLQACNTVAKVVQLHARILKLGLQNN 60
Query: 61 PLVLTKFASISSFIHATDYAACFLFSAEADTRLYDAFLFNTLIRAYAQTGHSKDKALSLY 120
PLVLTKF S SS + ATDYA+ FLF +ADTRLYD FLFNT+IRAYAQT HSK+KAL LY
Sbjct: 61 PLVLTKFTSTSSELGATDYASSFLFCPDADTRLYDTFLFNTMIRAYAQTSHSKNKALCLY 120
Query: 121 GIMLHDGILPNKFTYPFVLKACAGLEVLNLGQSVHGSVVKFGFDRDIHVQNTMVHMYSCC 180
MLH GI PNKFTYPFVLKACAG+ LN+G+SVHGSVVK+GFD D+HV NTMVHMY CC
Sbjct: 121 NGMLHFGISPNKFTYPFVLKACAGVGDLNVGKSVHGSVVKYGFDDDVHVLNTMVHMYCCC 180
Query: 181 AGGINSARKLFDEMPKSDSVTWSAMIGGYARVGRSTEAVALFREMQMAEVCPDEITMVSM 240
GGI RK+F+EMPKSDSV+WSAMIGGYAR+G STEAV LFR+MQ+ V PDEITMVS+
Sbjct: 181 DGGIECGRKVFEEMPKSDSVSWSAMIGGYARLGLSTEAVGLFRKMQIEGVRPDEITMVSV 240
Query: 241 LSACTDLGALELGKWIEAYIERQGIQKPVVVTNALIDMFAKCGDISKALKLFRTMNEKTI 300
LSAC DLGALELGKW+E+YIE++GIQK V + NA+IDMFAKCGD+ KALKLFR M+EKTI
Sbjct: 241 LSACADLGALELGKWVESYIEKEGIQKTVELCNAVIDMFAKCGDVDKALKLFRNMSEKTI 300
Query: 301 VSWTSVIVGMAMHGRGQEAICLFEEMIGSGVPPDGVAFIGLLSACSHSGLVERGREYFSS 360
VSWTSVIVG+AMHGRG EAI LFEEMIG GV PD VAF+GLLSACSHSGLVE+G+ +FS
Sbjct: 301 VSWTSVIVGLAMHGRGLEAISLFEEMIGKGVTPDHVAFVGLLSACSHSGLVEKGKSFFSI 360
Query: 361 MMKKYKLVPKIEHYGCMVDMYCRTGLVKEALEFVRNMPIEPNPVILRTLVSACRGHGEFK 420
M ++Y + P+IEHYGCMVDM CRTGLV EALEFV+ MPIEPNP+++RTL+SACR H E K
Sbjct: 361 MTQEYGIAPRIEHYGCMVDMLCRTGLVNEALEFVKKMPIEPNPIVMRTLISACRVHDELK 420
Query: 421 LGEKITKLLMRHEPLHESNYVLLSNIYAKMLSWEKKTKIREVMEVKGMKKVPGSTMIEID 480
LGE ITKLL+ +EP+HESNYVLLSNIYAKM WEKKTK RE M+ KGMKK+PGSTMIE+D
Sbjct: 421 LGESITKLLIENEPMHESNYVLLSNIYAKMFHWEKKTKTREAMDKKGMKKIPGSTMIELD 480
Query: 481 NEIYEFVAGDKSHKQFKEIYEMVDEMGREMKKSGYRPSTSEVLLDINEEDKEDTLNRHSE 540
N+IYEFVAGDKSH+Q+KEIYEM+DEMGR+MK++GY PSTSEVLLDI+EEDKED LNRHSE
Sbjct: 481 NQIYEFVAGDKSHEQYKEIYEMMDEMGRKMKRAGYVPSTSEVLLDIDEEDKEDALNRHSE 540
Query: 541 KLAIAFGLLSTPPGTPIRIVKNLRVCNDCHSASKFISKIYDREIIMRDRNRFHHFKSGQC 600
KLAIAF LL++PPGTPIRIVKNLRVC+DCHSA+KFISKIY+REI++RDRNRFHHFK G C
Sbjct: 541 KLAIAFALLNSPPGTPIRIVKNLRVCSDCHSATKFISKIYNREIVVRDRNRFHHFKDGFC 600
Query: 601 SCGDFW 606
SC DFW
Sbjct: 601 SCKDFW 606
BLAST of Lsi08G011960 vs. NCBI nr
Match:
gi|657990888|ref|XP_008387666.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g21065-like [Malus domestica])
HSP 1 Score: 933.3 bits (2411), Expect = 2.1e-268
Identity = 443/585 (75.73%), Postives = 512/585 (87.52%), Query Frame = 1
Query: 21 TTNPRAAEQNCLALLQACNALPKLTQIHTHIIKLGLHNNPLVLTKFASISSFIHATDYAA 80
T N R AEQ+CLALLQ C+A+ KL+QIH H++K GL NNPLVLTKFA+ +S + A DYA+
Sbjct: 11 TANRREAEQSCLALLQGCDAVSKLSQIHAHVLKSGLQNNPLVLTKFAATASDLKAIDYAS 70
Query: 81 CFLFSAEADTRLYDAFLFNTLIRAYAQTGHSKDKALSLYGIMLHDGILPNKFTYPFVLKA 140
FLFS +ADT LYD+FLFNT+IRAYAQT H K KAL Y +M+ +LPNKFTYPFVLKA
Sbjct: 71 SFLFSGDADTHLYDSFLFNTVIRAYAQTSHEKHKALCFYNVMVQGSVLPNKFTYPFVLKA 130
Query: 141 CAGLEVLNLGQSVHGSVVKFGFDRDIHVQNTMVHMYSCCAGGINSARKLFDEMPKSDSVT 200
CAG+ LNLG+SVHGSVVKFGFD D+HV NTMVHMY CC GGI ARK+FDEMPK DSV+
Sbjct: 131 CAGIGDLNLGKSVHGSVVKFGFDADVHVCNTMVHMYCCCGGGIEFARKVFDEMPKLDSVS 190
Query: 201 WSAMIGGYARVGRSTEAVALFREMQMAEVCPDEITMVSMLSACTDLGALELGKWIEAYIE 260
WSAMIGGY RVG ST++V LFREMQMA V PDEITMVS+LSACTDLGALELGKW+E+YIE
Sbjct: 191 WSAMIGGYVRVGWSTDSVELFREMQMAGVKPDEITMVSVLSACTDLGALELGKWVESYIE 250
Query: 261 RQGIQKPVVVTNALIDMFAKCGDISKALKLFRTMNEKTIVSWTSVIVGMAMHGRGQEAIC 320
++GI K V + NALIDMFAKCG++ KALKLFR M+ +TIVSWTSVI G+AMHGRG EAI
Sbjct: 251 KEGIHKSVELCNALIDMFAKCGNVDKALKLFRNMSGRTIVSWTSVIDGLAMHGRGMEAIA 310
Query: 321 LFEEMIGSGVPPDGVAFIGLLSACSHSGLVERGREYFSSMMKKYKLVPKIEHYGCMVDMY 380
LFEEMIG+GV PD VAF+GLLSACSHSGLVE+G+ YFSSM++K+++VPKIEHYGCMVDM+
Sbjct: 311 LFEEMIGTGVAPDDVAFLGLLSACSHSGLVEKGKRYFSSMVEKFQIVPKIEHYGCMVDMF 370
Query: 381 CRTGLVKEALEFVRNMPIEPNPVILRTLVSACRGHGEFKLGEKITKLLMRHEPLHESNYV 440
CR G VKEA EF++ MPIEPNP+++RTL+SAC HGE KLGE ITK L+R EP+ ESNYV
Sbjct: 371 CRAGHVKEASEFIQKMPIEPNPIVMRTLISACHAHGELKLGESITKQLIRSEPMQESNYV 430
Query: 441 LLSNIYAKMLSWEKKTKIREVMEVKGMKKVPGSTMIEIDNEIYEFVAGDKSHKQFKEIYE 500
LLSNIYAKM W+KKTKIRE M+ KGMKK+PGSTMIE+D+EIYEFVAGDKSH+Q KEIYE
Sbjct: 431 LLSNIYAKMNHWDKKTKIREAMDKKGMKKIPGSTMIELDHEIYEFVAGDKSHRQXKEIYE 490
Query: 501 MVDEMGREMKKSGYRPSTSEVLLDINEEDKEDTLNRHSEKLAIAFGLLSTPPGTPIRIVK 560
MV+EMGR+MKK+GY P+TSEVLLDINEEDKED LNRHSEKLAIAF LL+TPPGTPIRIVK
Sbjct: 491 MVEEMGRKMKKAGYVPTTSEVLLDINEEDKEDALNRHSEKLAIAFALLNTPPGTPIRIVK 550
Query: 561 NLRVCNDCHSASKFISKIYDREIIMRDRNRFHHFKSGQCSCGDFW 606
NLRVC+DCHSA+KFISK+Y+REI++RDRNRFHHFK G CSC DFW
Sbjct: 551 NLRVCDDCHSATKFISKVYNREIVVRDRNRFHHFKDGMCSCRDFW 595
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| PP330_ARATH | 2.6e-141 | 43.84 | Pentatricopeptide repeat-containing protein At4g21065 OS=Arabidopsis thaliana GN... | [more] |
| PP145_ARATH | 3.7e-140 | 43.62 | Pentatricopeptide repeat-containing protein At2g02980, chloroplastic OS=Arabidop... | [more] |
| PPR21_ARATH | 2.2e-137 | 46.11 | Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop... | [more] |
| PP449_ARATH | 3.4e-133 | 39.01 | Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana GN... | [more] |
| PPR68_ARATH | 7.0e-131 | 40.24 | Pentatricopeptide repeat-containing protein At1g31920 OS=Arabidopsis thaliana GN... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0LQ71_CUCSA | 0.0e+00 | 94.72 | Uncharacterized protein OS=Cucumis sativus GN=Csa_2G381680 PE=4 SV=1 | [more] |
| W9RXB9_9ROSA | 3.4e-265 | 73.88 | Uncharacterized protein OS=Morus notabilis GN=L484_001891 PE=4 SV=1 | [more] |
| F6H313_VITVI | 2.3e-253 | 69.66 | Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0008g05280 PE=4 SV=... | [more] |
| A0A067KBT2_JATCU | 3.9e-253 | 72.14 | Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07178 PE=4 SV=1 | [more] |
| A0A068UYV8_COFCA | 4.3e-252 | 70.23 | Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00038456001 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT4G21065.1 | 1.4e-142 | 43.84 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
| AT2G02980.1 | 2.1e-141 | 43.62 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
| AT1G08070.1 | 1.3e-138 | 46.11 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
| AT5G66520.1 | 1.9e-134 | 39.01 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
| AT1G31920.1 | 3.9e-132 | 40.24 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
