Carg03921 (gene) Silver-seed gourd

Overview
NameCarg03921
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionPentatricopeptide repeat
LocationCucurbita_argyrosperma_scaffold_011 : 807661 .. 810573 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAATCTCAATTTCTATTGCGTGTAATCAACAATGCGGCAGCTTCAAGATCCAACCCTCGTGCGGCGGAGCAGAACTGTTTAGCGCTGCTTCAGGCCTGTAATTCGCTACCGAAGCTCACCCAAATCCACGCTCACATCTTCAAATTGGGCCTCCGCAACAACCCGCTCGTCCTCACCAAATTCGCCTCCATTTCCTCTGTTATCAATGCCACCGATTACGCTGCCTCCTTCTTGTTCTCTGCCGAAGCCGATACTCGGCTTTACGATGCGTTTCTATTCAATACTCTCATTAGAGCCTTTGCCCAAACTGGTCACTCGAAGGCTAGGGCACTGTCTTTGTATGGTATTATGCTTCACGATGGGATTTTGCCTAATAAATTCACTTACCCTTTTGTTTTGAAGGCTTGTGCTGGCCTTGAGGTTTTGAGTTTGGGTCAATCGGTTCATGGGTCGGTGGTGAAATTTGGGTTTGATCATGATGTTCATGTTCAGAATACTATGGTTCATATGTACTCTTGTTGCAGTGGTGGGATAATTTTTGCCCGCAAGGTGTTTGATGAAATGCCCAAGTCAGATTCTGTGACTTGGAGTGCGATGATTGGAGGGTATGCTCGTGTGGGGCGCTCCACTGAAGCAGTGGCCTTATTTAGGGAGATGCAAATGGCGGAGGTTTGCCCGGATGAGATCACTATGGTCTCTGTTCTTAAAGCTTGTACTGATTTGGGTGCCCTTGAACTTGGGAAATGGATTGAAGCTTATATAGAGAGACAAGGAATTCAGAAACCAGTAGAGGTTAGCAATGCACTTATTGATATGTTTGCAAAGTGTGGCGATATTGGTAAAGCTTTGAAGTTATTTAGAGCTATGAGTGATAAAACGATAGTTTCTTGGACTTCTGTGATTGTTGGCATGGCAATGCATGGCCGTGGCCAGGAGGCTATTTCTTTGTTTGAGGAAATGATAGGTTCGTCCGGTGTTGCTCCAGACGATGTCGCCTTTATCGGGTTGCTTTCCGCTTGCAGCCATTCAGGACTAGTCGAAAGAGGTAGAGAATATTTCAATTCTATGATGAAGAAATACAAGCTTGTTCCTAAGATAGAACATTATGGATGCATGGTGGACATGTATTGCAGGACTGGACTTGTGAAGGAGGCTCTTGAGTTCGTTCATAACATGCCGATCGAGCCAAACCCGGTGATTTTACGAACGCTAGTCAGTGCTTGTCGTGGTCATGGTGAATTCAAGCTTGGTGAAAAGATCACCAAACTGTTAATGAGACATGAGCCTATGCATGAGTCAAACTATGTTTTGCTGTCCAACATTTATGCAAAGATGTTCAATTGGGAGAAGAAGACCAAAATTAGAGAAGTGATGGAAGTGAAAGGCATGAAAAAGGTTCCAGGAAGCACCATGATTGAGATAGATAATGAAATCTATGAATTTGTTGCTGGTGATAAATCTCATAAACAGTTCAAGGAAATTTACGCGATGGTGGACGAGATGGGGCGAGAGATGACGAAATCTGGATATCGACCTTCGACATCGGAAGTTTTGCTCGATATCAACGAAGAAGACAAAGAAGATACTTTGAATAGGCATAGTGAAAAACTGGCTATTGCATTTGGTCTTCTTAATACTCCACCAGGAACTCCGATTCGAATCGTAAAGAATTTGCGAGTTTGCACCGATTGCCACTCCGCTTCGAAGTTCATCTCGAAGATTTATGATCGTGAAATCATAATGAGGGACCGTAATCGGTTTCACCACTTCAAGGGTGGGCTGTGCTCGTGTGGAGATTTCTGGTGAAGTTAAAATAGCGCCACCAACGTGTCTTCCAGAATCGATGTAACAATCCAAACCCACCGCTAACAGAATTCAGCCACGTTCAGTTGCTTTTGCTTGGAAGGTTTCTTTGCCGCAACCAAAATAAGAAGCTAGTTTCTTCAGCTGACAGCTTGATCTCAAAGGCGATCGAACGAACAACTCGGTAACGTTCGACTTATCTTCAACTCCATTGTAGAAGATCTTTCAAGTAATCATAGTTTATGCTTAAAGGCTCTAGAACTTGATTCTTCCAAGTTATGAACTTCTCAATTCAATCTGAATTTTGCAGGCATGTCAAATTTCACTCTGTTTTGTTCAATCATTAAGGAAACTTCATCAAACACAGCACAGGATGCAGAGACTCTGAAATTATGAAAATCAAGGTAATTCCTGTTGAACATGATTAAGATAATTGATTTACTATAAAGTCTGGATTAAATGATACGAGCCTTCCCACCTCGGGGAACGTGAATAAACCATAAAGTCATATGAGTATAACTCAACCGTAATTAACAGGTAGGTTAAGAGTCGAACAATTATTGGAAGTAATTTAGGGTTAGATGCACAAATAAAAGCAAAGTTTGTGCGTTTGGTGAGTCTCCGGTGGAGATGCCAAAAGTAAATCCGCTGTCTTCAATCTCTCTATGAATCTCTATCCAATTCCATTGAGTTCCCAAACAAGGTAGGTAAGCTTGCACCAACCATGGAATTATCAAAAGTGTTTTTTTAAGCTTAAGAGAAGGTCCTACTGTGAACGAGTTGAAACTGACGATTCGAAAACAAAATTAGAAACTACAGCTTCTAAAACCAATACTTTTATGCTTGTTCTTCGTTTCAGGGATGGTTAACCAAAAGCTGTGAGACCGAGTTTACGAGGTGAAGGAGAAAAGTTGTGGGTCCTTCTTATAATGCTACAGACGATTGTCCGAAGTGCAAGCATAAACTCGAACTCAGATAGGATAAGATTGTGCGCGTAGGACCCTTTTAATCCGAATGAAGAGAGGGCTACTAGAACTGAAAAATCAAGCTAGTCTGAAGATGAATTGAAATTTTGGTGACGTTTAAATTAGCATTAAGTATTCTACC

mRNA sequence

ATGCAATCTCAATTTCTATTGCGTGTAATCAACAATGCGGCAGCTTCAAGATCCAACCCTCGTGCGGCGGAGCAGAACTGTTTAGCGCTGCTTCAGGCCTGTAATTCGCTACCGAAGCTCACCCAAATCCACGCTCACATCTTCAAATTGGGCCTCCGCAACAACCCGCTCGTCCTCACCAAATTCGCCTCCATTTCCTCTGTTATCAATGCCACCGATTACGCTGCCTCCTTCTTGTTCTCTGCCGAAGCCGATACTCGGCTTTACGATGCGTTTCTATTCAATACTCTCATTAGAGCCTTTGCCCAAACTGGTCACTCGAAGGCTAGGGCACTGTCTTTGTATGGTATTATGCTTCACGATGGGATTTTGCCTAATAAATTCACTTACCCTTTTGTTTTGAAGGCTTGTGCTGGCCTTGAGGTTTTGAGTTTGGGTCAATCGGTTCATGGGTCGGTGGTGAAATTTGGGTTTGATCATGATGTTCATGTTCAGAATACTATGGTTCATATGTACTCTTGTTGCAGTGGTGGGATAATTTTTGCCCGCAAGGTGTTTGATGAAATGCCCAAGTCAGATTCTGTGACTTGGAGTGCGATGATTGGAGGGTATGCTCGTGTGGGGCGCTCCACTGAAGCAGTGGCCTTATTTAGGGAGATGCAAATGGCGGAGGTTTGCCCGGATGAGATCACTATGGTCTCTGTTCTTAAAGCTTGTACTGATTTGGGTGCCCTTGAACTTGGGAAATGGATTGAAGCTTATATAGAGAGACAAGGAATTCAGAAACCAGTAGAGGTTAGCAATGCACTTATTGATATGTTTGCAAAGTGTGGCGATATTGGTAAAGCTTTGAAGTTATTTAGAGCTATGAGTGATAAAACGATAGTTTCTTGGACTTCTGTGATTGTTGGCATGGCAATGCATGGCCGTGGCCAGGAGGCTATTTCTTTGTTTGAGGAAATGATAGGTTCGTCCGGTGTTGCTCCAGACGATGTCGCCTTTATCGGGTTGCTTTCCGCTTGCAGCCATTCAGGACTAGTCGAAAGAGGTAGAGAATATTTCAATTCTATGATGAAGAAATACAAGCTTGTTCCTAAGATAGAACATTATGGATGCATGGTGGACATGTATTGCAGGACTGGACTTGTGAAGGAGGCTCTTGAGTTCGTTCATAACATGCCGATCGAGCCAAACCCGGTGATTTTACGAACGCTAGTCAGTGCTTGTCGTGGTCATGGTGAATTCAAGCTTGGTGAAAAGATCACCAAACTGTTAATGAGACATGAGCCTATGCATGAGTCAAACTATGTTTTGCTGTCCAACATTTATGCAAAGATGTTCAATTGGGAGAAGAAGACCAAAATTAGAGAAGTGATGGAAGTGAAAGGCATGAAAAAGGTTCCAGGAAGCACCATGATTGAGATAGATAATGAAATCTATGAATTTGTTGCTGGTGATAAATCTCATAAACAGTTCAAGGAAATTTACGCGATGGTGGACGAGATGGGGCGAGAGATGACGAAATCTGGATATCGACCTTCGACATCGGAAGTTTTGCTCGATATCAACGAAGAAGACAAAGAAGATACTTTGAATAGGCATAGTGAAAAACTGGCTATTGCATTTGGTCTTCTTAATACTCCACCAGGAACTCCGATTCGAATCGTAAAGAATTTGCGAGTTTGCACCGATTGCCACTCCGCTTCGAAGTTCATCTCGAAGATTTATGATCGTGAAATCATAATGAGGGACCGTAATCGGTTTCACCACTTCAAGGGCATGTCAAATTTCACTCTGTTTTGTTCAATCATTAAGGAAACTTCATCAAACACAGCACAGGATGCAGAGACTCTGAAATTATGAAAATCAAGGGATGGTTAACCAAAAGCTGTGAGACCGAGTTTACGAGGTGAAGGAGAAAAGTTGTGGGTCCTTCTTATAATGCTACAGACGATTGTCCGAAGTGCAAGCATAAACTCGAACTCAGATAGGATAAGATTGTGCGCGTAGGACCCTTTTAATCCGAATGAAGAGAGGGCTACTAGAACTGAAAAATCAAGCTAGTCTGAAGATGAATTGAAATTTTGGTGACGTTTAAATTAGCATTAAGTATTCTACC

Coding sequence (CDS)

ATGCAATCTCAATTTCTATTGCGTGTAATCAACAATGCGGCAGCTTCAAGATCCAACCCTCGTGCGGCGGAGCAGAACTGTTTAGCGCTGCTTCAGGCCTGTAATTCGCTACCGAAGCTCACCCAAATCCACGCTCACATCTTCAAATTGGGCCTCCGCAACAACCCGCTCGTCCTCACCAAATTCGCCTCCATTTCCTCTGTTATCAATGCCACCGATTACGCTGCCTCCTTCTTGTTCTCTGCCGAAGCCGATACTCGGCTTTACGATGCGTTTCTATTCAATACTCTCATTAGAGCCTTTGCCCAAACTGGTCACTCGAAGGCTAGGGCACTGTCTTTGTATGGTATTATGCTTCACGATGGGATTTTGCCTAATAAATTCACTTACCCTTTTGTTTTGAAGGCTTGTGCTGGCCTTGAGGTTTTGAGTTTGGGTCAATCGGTTCATGGGTCGGTGGTGAAATTTGGGTTTGATCATGATGTTCATGTTCAGAATACTATGGTTCATATGTACTCTTGTTGCAGTGGTGGGATAATTTTTGCCCGCAAGGTGTTTGATGAAATGCCCAAGTCAGATTCTGTGACTTGGAGTGCGATGATTGGAGGGTATGCTCGTGTGGGGCGCTCCACTGAAGCAGTGGCCTTATTTAGGGAGATGCAAATGGCGGAGGTTTGCCCGGATGAGATCACTATGGTCTCTGTTCTTAAAGCTTGTACTGATTTGGGTGCCCTTGAACTTGGGAAATGGATTGAAGCTTATATAGAGAGACAAGGAATTCAGAAACCAGTAGAGGTTAGCAATGCACTTATTGATATGTTTGCAAAGTGTGGCGATATTGGTAAAGCTTTGAAGTTATTTAGAGCTATGAGTGATAAAACGATAGTTTCTTGGACTTCTGTGATTGTTGGCATGGCAATGCATGGCCGTGGCCAGGAGGCTATTTCTTTGTTTGAGGAAATGATAGGTTCGTCCGGTGTTGCTCCAGACGATGTCGCCTTTATCGGGTTGCTTTCCGCTTGCAGCCATTCAGGACTAGTCGAAAGAGGTAGAGAATATTTCAATTCTATGATGAAGAAATACAAGCTTGTTCCTAAGATAGAACATTATGGATGCATGGTGGACATGTATTGCAGGACTGGACTTGTGAAGGAGGCTCTTGAGTTCGTTCATAACATGCCGATCGAGCCAAACCCGGTGATTTTACGAACGCTAGTCAGTGCTTGTCGTGGTCATGGTGAATTCAAGCTTGGTGAAAAGATCACCAAACTGTTAATGAGACATGAGCCTATGCATGAGTCAAACTATGTTTTGCTGTCCAACATTTATGCAAAGATGTTCAATTGGGAGAAGAAGACCAAAATTAGAGAAGTGATGGAAGTGAAAGGCATGAAAAAGGTTCCAGGAAGCACCATGATTGAGATAGATAATGAAATCTATGAATTTGTTGCTGGTGATAAATCTCATAAACAGTTCAAGGAAATTTACGCGATGGTGGACGAGATGGGGCGAGAGATGACGAAATCTGGATATCGACCTTCGACATCGGAAGTTTTGCTCGATATCAACGAAGAAGACAAAGAAGATACTTTGAATAGGCATAGTGAAAAACTGGCTATTGCATTTGGTCTTCTTAATACTCCACCAGGAACTCCGATTCGAATCGTAAAGAATTTGCGAGTTTGCACCGATTGCCACTCCGCTTCGAAGTTCATCTCGAAGATTTATGATCGTGAAATCATAATGAGGGACCGTAATCGGTTTCACCACTTCAAGGGCATGTCAAATTTCACTCTGTTTTGTTCAATCATTAAGGAAACTTCATCAAACACAGCACAGGATGCAGAGACTCTGAAATTATGA

Protein sequence

MQSQFLLRVINNAAASRSNPRAAEQNCLALLQACNSLPKLTQIHAHIFKLGLRNNPLVLTKFASISSVINATDYAASFLFSAEADTRLYDAFLFNTLIRAFAQTGHSKARALSLYGIMLHDGILPNKFTYPFVLKACAGLEVLSLGQSVHGSVVKFGFDHDVHVQNTMVHMYSCCSGGIIFARKVFDEMPKSDSVTWSAMIGGYARVGRSTEAVALFREMQMAEVCPDEITMVSVLKACTDLGALELGKWIEAYIERQGIQKPVEVSNALIDMFAKCGDIGKALKLFRAMSDKTIVSWTSVIVGMAMHGRGQEAISLFEEMIGSSGVAPDDVAFIGLLSACSHSGLVERGREYFNSMMKKYKLVPKIEHYGCMVDMYCRTGLVKEALEFVHNMPIEPNPVILRTLVSACRGHGEFKLGEKITKLLMRHEPMHESNYVLLSNIYAKMFNWEKKTKIREVMEVKGMKKVPGSTMIEIDNEIYEFVAGDKSHKQFKEIYAMVDEMGREMTKSGYRPSTSEVLLDINEEDKEDTLNRHSEKLAIAFGLLNTPPGTPIRIVKNLRVCTDCHSASKFISKIYDREIIMRDRNRFHHFKGMSNFTLFCSIIKETSSNTAQDAETLKL
Homology
[Close]
BLAST of Carg03921 vs. NCBI nr
Match: XP_023537014.1 (pentatricopeptide repeat-containing protein At4g21065-like [Cucurbita pepo subsp. pepo] >XP_023537016.1 pentatricopeptide repeat-containing protein At4g21065-like [Cucurbita pepo subsp. pepo] >XP_023537017.1 pentatricopeptide repeat-containing protein At4g21065-like [Cucurbita pepo subsp. pepo] >XP_023537018.1 pentatricopeptide repeat-containing protein At4g21065-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1180.2 bits (3052), Expect = 0.0e+00
Identity = 589/593 (99.33%), Postives = 590/593 (99.49%), Query Frame = 0 

Query: 1   MQSQFLLRVINNAAASRSNPRAAEQNCLALLQACNSLPKLTQIHAHIFKLGLRNNPLVLT 60
           MQSQFL RVINNAAASRSNPRAAEQNCLALLQACNSLPKLTQIHAHIFKLGL NNPLVLT
Sbjct: 1   MQSQFLSRVINNAAASRSNPRAAEQNCLALLQACNSLPKLTQIHAHIFKLGLHNNPLVLT 60

Query: 61  KFASISSVINATDYAASFLFSAEADTRLYDAFLFNTLIRAFAQTGHSKARALSLYGIMLH 120
           KFASISSVINATDYAASFLFSAEADTRLYDAFLFNTLIRAFAQTGHSKARALSLYGIMLH
Sbjct: 61  KFASISSVINATDYAASFLFSAEADTRLYDAFLFNTLIRAFAQTGHSKARALSLYGIMLH 120

Query: 121 DGILPNKFTYPFVLKACAGLEVLSLGQSVHGSVVKFGFDHDVHVQNTMVHMYSCCSGGII 180
           DGILPNKFTYPFVLKACAGLEVLSLGQSVHGSVVKFGFDHDVHVQNTMVHMYSCCSGGII
Sbjct: 121 DGILPNKFTYPFVLKACAGLEVLSLGQSVHGSVVKFGFDHDVHVQNTMVHMYSCCSGGII 180

Query: 181 FARKVFDEMPKSDSVTWSAMIGGYARVGRSTEAVALFREMQMAEVCPDEITMVSVLKACT 240
           FARKVFDEMPKSDSVTWSAMIGGYARVGRSTEAVALFREMQMAEVCPDEITMVSVL ACT
Sbjct: 181 FARKVFDEMPKSDSVTWSAMIGGYARVGRSTEAVALFREMQMAEVCPDEITMVSVLSACT 240

Query: 241 DLGALELGKWIEAYIERQGIQKPVEVSNALIDMFAKCGDIGKALKLFRAMSDKTIVSWTS 300
           DLGALELGKWIEAYIERQGIQKPVEVSNALIDMFAKCGDIGKALKLFRAMSDKTIVSWTS
Sbjct: 241 DLGALELGKWIEAYIERQGIQKPVEVSNALIDMFAKCGDIGKALKLFRAMSDKTIVSWTS 300

Query: 301 VIVGMAMHGRGQEAISLFEEMIGSSGVAPDDVAFIGLLSACSHSGLVERGREYFNSMMKK 360
           VIVGMAMHGRGQEAISLFEEMIGSSGVAPDDVAFIGLLSACSHSGLVERGREYFNSMMKK
Sbjct: 301 VIVGMAMHGRGQEAISLFEEMIGSSGVAPDDVAFIGLLSACSHSGLVERGREYFNSMMKK 360

Query: 361 YKLVPKIEHYGCMVDMYCRTGLVKEALEFVHNMPIEPNPVILRTLVSACRGHGEFKLGEK 420
           YKLVPKIEHYGCMVDMYCRTGLVKEALEFVHNMPIEPNPVILRTLVSACRGHGEFKLGEK
Sbjct: 361 YKLVPKIEHYGCMVDMYCRTGLVKEALEFVHNMPIEPNPVILRTLVSACRGHGEFKLGEK 420

Query: 421 ITKLLMRHEPMHESNYVLLSNIYAKMFNWEKKTKIREVMEVKGMKKVPGSTMIEIDNEIY 480
           ITKLLMRHEPMHESNYVLLSNIYAKMFNWEKKTKIREVMEVKGMKKVPGSTMIEIDNEIY
Sbjct: 421 ITKLLMRHEPMHESNYVLLSNIYAKMFNWEKKTKIREVMEVKGMKKVPGSTMIEIDNEIY 480

Query: 481 EFVAGDKSHKQFKEIYAMVDEMGREMTKSGYRPSTSEVLLDINEEDKEDTLNRHSEKLAI 540
           EFVAGDKSHKQFKEIYAMVDEMGREMTKSGYRPSTSEVLLDINEEDKEDTLNRHSEKLAI
Sbjct: 481 EFVAGDKSHKQFKEIYAMVDEMGREMTKSGYRPSTSEVLLDINEEDKEDTLNRHSEKLAI 540

Query: 541 AFGLLNTPPGTPIRIVKNLRVCTDCHSASKFISKIYDREIIMRDRNRFHHFKG 594
           AFGLLNTPPGTPIRIVKNLRVC+DCHSASKFISKIYDREIIMRDRNRFHHFKG
Sbjct: 541 AFGLLNTPPGTPIRIVKNLRVCSDCHSASKFISKIYDREIIMRDRNRFHHFKG 593

[Close]
BLAST of Carg03921 vs. NCBI nr
Match: XP_022951399.1 (pentatricopeptide repeat-containing protein At4g21065-like [Cucurbita moschata] >XP_022951400.1 pentatricopeptide repeat-containing protein At4g21065-like [Cucurbita moschata] >XP_022951401.1 pentatricopeptide repeat-containing protein At4g21065-like [Cucurbita moschata])

HSP 1 Score: 1175.6 bits (3040), Expect = 0.0e+00
Identity = 587/593 (98.99%), Postives = 588/593 (99.16%), Query Frame = 0 

Query: 1   MQSQFLLRVINNAAASRSNPRAAEQNCLALLQACNSLPKLTQIHAHIFKLGLRNNPLVLT 60
           MQSQFLLRVI+NAAASRSNPRAAEQNCLALLQACNSLPKLTQIHAHIFKLGLRNNPLVLT
Sbjct: 1   MQSQFLLRVISNAAASRSNPRAAEQNCLALLQACNSLPKLTQIHAHIFKLGLRNNPLVLT 60

Query: 61  KFASISSVINATDYAASFLFSAEADTRLYDAFLFNTLIRAFAQTGHSKARALSLYGIMLH 120
           KFASISSVINATDYAASFLFSAEADTRLYDAFLFNTLIRAFAQTGHSKARALSLYGIMLH
Sbjct: 61  KFASISSVINATDYAASFLFSAEADTRLYDAFLFNTLIRAFAQTGHSKARALSLYGIMLH 120

Query: 121 DGILPNKFTYPFVLKACAGLEVLSLGQSVHGSVVKFGFDHDVHVQNTMVHMYSCCSGGII 180
           DGILPNKFTYPFVLKACAGLEVLSLGQSVHGSVVKFGFDHDVHVQNTMVHMYSCCSGGII
Sbjct: 121 DGILPNKFTYPFVLKACAGLEVLSLGQSVHGSVVKFGFDHDVHVQNTMVHMYSCCSGGII 180

Query: 181 FARKVFDEMPKSDSVTWSAMIGGYARVGRSTEAVALFREMQMAEVCPDEITMVSVLKACT 240
           FARKVFDEMPKSDSVTWSAMIGGYARVGRSTEAVALFREMQMAEVCPDEITMVSVL ACT
Sbjct: 181 FARKVFDEMPKSDSVTWSAMIGGYARVGRSTEAVALFREMQMAEVCPDEITMVSVLSACT 240

Query: 241 DLGALELGKWIEAYIERQGIQKPVEVSNALIDMFAKCGDIGKALKLFRAMSDKTIVSWTS 300
           DLGALELGKWIEAYIERQGIQKPVEVSNALIDMFAKCGDIGKALKLFRAMSDKTIVSWTS
Sbjct: 241 DLGALELGKWIEAYIERQGIQKPVEVSNALIDMFAKCGDIGKALKLFRAMSDKTIVSWTS 300

Query: 301 VIVGMAMHGRGQEAISLFEEMIGSSGVAPDDVAFIGLLSACSHSGLVERGREYFNSMMKK 360
           VIVGMAMHGRG EAI LFEEMIGSS VAPDDVAFIGLLSACSHSGLVERGREYFNSMMKK
Sbjct: 301 VIVGMAMHGRGLEAICLFEEMIGSSSVAPDDVAFIGLLSACSHSGLVERGREYFNSMMKK 360

Query: 361 YKLVPKIEHYGCMVDMYCRTGLVKEALEFVHNMPIEPNPVILRTLVSACRGHGEFKLGEK 420
           YKLVPKIEHYGCMVDMYCRTGLVKEALEFVHNMP EPNPVILRTLVSACRGHGEFKLGEK
Sbjct: 361 YKLVPKIEHYGCMVDMYCRTGLVKEALEFVHNMPFEPNPVILRTLVSACRGHGEFKLGEK 420

Query: 421 ITKLLMRHEPMHESNYVLLSNIYAKMFNWEKKTKIREVMEVKGMKKVPGSTMIEIDNEIY 480
           ITKLLMRHEPMHESNYVLLSNIYAKMFNWEKKTKIREVMEVKGMKKVPGSTMIEIDNEIY
Sbjct: 421 ITKLLMRHEPMHESNYVLLSNIYAKMFNWEKKTKIREVMEVKGMKKVPGSTMIEIDNEIY 480

Query: 481 EFVAGDKSHKQFKEIYAMVDEMGREMTKSGYRPSTSEVLLDINEEDKEDTLNRHSEKLAI 540
           EFVAGDKSHKQFKEIYAMVDEMGREMTKSGYRPSTSEVLLDINEEDKEDTLNRHSEKLAI
Sbjct: 481 EFVAGDKSHKQFKEIYAMVDEMGREMTKSGYRPSTSEVLLDINEEDKEDTLNRHSEKLAI 540

Query: 541 AFGLLNTPPGTPIRIVKNLRVCTDCHSASKFISKIYDREIIMRDRNRFHHFKG 594
           AFGLLNTPPGTPIRIVKNLRVCTDCHSASKFISKIYDREIIMRDRNRFHHFKG
Sbjct: 541 AFGLLNTPPGTPIRIVKNLRVCTDCHSASKFISKIYDREIIMRDRNRFHHFKG 593

[Close]
BLAST of Carg03921 vs. NCBI nr
Match: XP_023002279.1 (pentatricopeptide repeat-containing protein At4g21065-like [Cucurbita maxima] >XP_023002280.1 pentatricopeptide repeat-containing protein At4g21065-like [Cucurbita maxima] >XP_023002281.1 pentatricopeptide repeat-containing protein At4g21065-like [Cucurbita maxima])

HSP 1 Score: 1154.8 bits (2986), Expect = 0.0e+00
Identity = 577/592 (97.47%), Postives = 581/592 (98.14%), Query Frame = 0 

Query: 1   MQSQFLLRVINNAAASRSNPRAAEQNCLALLQACNSLPKLTQIHAHIFKLGLRNNPLVLT 60
           MQSQF+LRVINNA ASRSNPRAAEQNCLALLQACN LPKLTQIHAHIFKLGL NNPLVLT
Sbjct: 1   MQSQFVLRVINNATASRSNPRAAEQNCLALLQACNLLPKLTQIHAHIFKLGLHNNPLVLT 60

Query: 61  KFASISSVINATDYAASFLFSAEADTRLYDAFLFNTLIRAFAQTGHSKARALSLYGIMLH 120
           KF SISSVINATDYAASFLFSAEADTRLYDAFLFNTLIRAFAQTGHSKARALSLYGIMLH
Sbjct: 61  KFVSISSVINATDYAASFLFSAEADTRLYDAFLFNTLIRAFAQTGHSKARALSLYGIMLH 120

Query: 121 DGILPNKFTYPFVLKACAGLEVLSLGQSVHGSVVKFGFDHDVHVQNTMVHMYSCCSGGII 180
           DGILPNKFTYPFVLKACAGLEVLSLGQSVHGSVVKFGFDHDVHVQNTMVHMYSCC+ GII
Sbjct: 121 DGILPNKFTYPFVLKACAGLEVLSLGQSVHGSVVKFGFDHDVHVQNTMVHMYSCCADGII 180

Query: 181 FARKVFDEMPKSDSVTWSAMIGGYARVGRSTEAVALFREMQMAEVCPDEITMVSVLKACT 240
           FARKVFDEMPKSDSVTWSAMIGGYARVGRSTEAVALFREMQMAEV PDEITMVSVL ACT
Sbjct: 181 FARKVFDEMPKSDSVTWSAMIGGYARVGRSTEAVALFREMQMAEVFPDEITMVSVLSACT 240

Query: 241 DLGALELGKWIEAYIERQGIQKPVEVSNALIDMFAKCGDIGKALKLFRAMSDKTIVSWTS 300
           DLGALELGKWIEAYIERQGIQKPVEVSNALIDMFAKCGDIGKALKLFR MS+KTIVSWTS
Sbjct: 241 DLGALELGKWIEAYIERQGIQKPVEVSNALIDMFAKCGDIGKALKLFRVMSEKTIVSWTS 300

Query: 301 VIVGMAMHGRGQEAISLFEEMIGSSGVAPDDVAFIGLLSACSHSGLVERGREYFNSMMKK 360
           VIVGMAMHGRGQEAI LFEEMIGSSGVAPDDVAFIGLLSACSHSGLVERGREYF+SMMKK
Sbjct: 301 VIVGMAMHGRGQEAICLFEEMIGSSGVAPDDVAFIGLLSACSHSGLVERGREYFSSMMKK 360

Query: 361 YKLVPKIEHYGCMVDMYCRTGLVKEALEFVHNMPIEPNPVILRTLVSACRGHGEFKLGEK 420
           YKLVPKIEHYGCMVDMYCRTGLVKEALEFVHNMPIEPN VILRTLVSACRGHGEFKLGEK
Sbjct: 361 YKLVPKIEHYGCMVDMYCRTGLVKEALEFVHNMPIEPNTVILRTLVSACRGHGEFKLGEK 420

Query: 421 ITKLLMRHEPMHESNYVLLSNIYAKMFNWEKKTKIREVMEVKGMKKVPGSTMIEIDNEIY 480
           ITKLLMRHEPMHESNYVLLSNIYAKMFNWEKK KIREVMEVKGMKKVPGSTMIEIDNEIY
Sbjct: 421 ITKLLMRHEPMHESNYVLLSNIYAKMFNWEKKAKIREVMEVKGMKKVPGSTMIEIDNEIY 480

Query: 481 EFVAGDKSHKQFKEIYAMVDEMGREMTKSGYRPSTSEVLLDINEEDKEDTLNRHSEKLAI 540
           EFVAGDKSHKQFKEIYAMVDEMGREMTKSGYRPSTSEVLLDINEEDKEDTLNRHSEKLAI
Sbjct: 481 EFVAGDKSHKQFKEIYAMVDEMGREMTKSGYRPSTSEVLLDINEEDKEDTLNRHSEKLAI 540

Query: 541 AFGLLNTPPGTPIRIVKNLRVCTDCHSASKFISKIYDREIIMRDRNRFHHFK 593
           AFGLLNTPPGTPIRIVKNLRVCTDCHSASKFISKIYDREIIMRDRNRFHHFK
Sbjct: 541 AFGLLNTPPGTPIRIVKNLRVCTDCHSASKFISKIYDREIIMRDRNRFHHFK 592

[Close]
BLAST of Carg03921 vs. NCBI nr
Match: XP_008445200.1 (PREDICTED: pentatricopeptide repeat-containing protein At4g21065-like [Cucumis melo])

HSP 1 Score: 1085.5 bits (2806), Expect = 0.0e+00
Identity = 545/597 (91.29%), Postives = 567/597 (94.97%), Query Frame = 0 

Query: 1   MQSQF----LLRVINNA-AASRSNPRAAEQNCLALLQACNSLPKLTQIHAHIFKLGLRNN 60
           MQSQF    LLR INN  A+S +NPRAAEQNCLALLQACN+LPKLTQIH HI KLGL NN
Sbjct: 1   MQSQFTKPKLLRTINNVLASSTTNPRAAEQNCLALLQACNALPKLTQIHTHIVKLGLHNN 60

Query: 61  PLVLTKFASISSVINATDYAASFLFSAEADTRLYDAFLFNTLIRAFAQTGHSKARALSLY 120
           PLVLTKFASISS+I+ATDYAASFLFSAEADTRLYDAFLFNTLIRA+AQTGHSK +AL+LY
Sbjct: 61  PLVLTKFASISSLIHATDYAASFLFSAEADTRLYDAFLFNTLIRAYAQTGHSKDKALALY 120

Query: 121 GIMLHDGILPNKFTYPFVLKACAGLEVLSLGQSVHGSVVKFGFDHDVHVQNTMVHMYSCC 180
           GIMLHDGILPNKFTYPFVLKACAGLEVL+LGQSVHGSVVKFGFD D+HVQNTMVHMYSCC
Sbjct: 121 GIMLHDGILPNKFTYPFVLKACAGLEVLNLGQSVHGSVVKFGFDCDIHVQNTMVHMYSCC 180

Query: 181 SGGIIFARKVFDEMPKSDSVTWSAMIGGYARVGRSTEAVALFREMQMAEVCPDEITMVSV 240
           +GGI  ARKVFDEMPKSDSVTWSAMIGGYARVGRSTEAVALFREMQMAEVCPDEITMVS+
Sbjct: 181 AGGINSARKVFDEMPKSDSVTWSAMIGGYARVGRSTEAVALFREMQMAEVCPDEITMVSM 240

Query: 241 LKACTDLGALELGKWIEAYIERQGIQKPVEVSNALIDMFAKCGDIGKALKLFRAMSDKTI 300
           L ACTDLGALELGKWIEAYIER GI KPVEVSNALIDMFAKCGDI KALKLFRAM++KTI
Sbjct: 241 LSACTDLGALELGKWIEAYIERHGIHKPVEVSNALIDMFAKCGDISKALKLFRAMNEKTI 300

Query: 301 VSWTSVIVGMAMHGRGQEAISLFEEMIGSSGVAPDDVAFIGLLSACSHSGLVERGREYFN 360
           VSWTSVIVGMAMHGRG+EA  LFEEMI +SGVAPDDVAFIGLLSACSHSGLVERGREYF 
Sbjct: 301 VSWTSVIVGMAMHGRGREATCLFEEMI-TSGVAPDDVAFIGLLSACSHSGLVERGREYFG 360

Query: 361 SMMKKYKLVPKIEHYGCMVDMYCRTGLVKEALEFVHNMPIEPNPVILRTLVSACRGHGEF 420
           SMMKKYKLVPKIEHYGCMVDMYCRTGLVKEALEFV NMPIEPNPVILRTLV+ACRGHGEF
Sbjct: 361 SMMKKYKLVPKIEHYGCMVDMYCRTGLVKEALEFVRNMPIEPNPVILRTLVTACRGHGEF 420

Query: 421 KLGEKITKLLMRHEPMHESNYVLLSNIYAKMFNWEKKTKIREVMEVKGMKKVPGSTMIEI 480
           KLGEKITKLLM+HEP+HESNYVLLSNIYAK  +WEKKTKIREVMEVKGMKKVPGSTMIEI
Sbjct: 421 KLGEKITKLLMKHEPLHESNYVLLSNIYAKTLSWEKKTKIREVMEVKGMKKVPGSTMIEI 480

Query: 481 DNEIYEFVAGDKSHKQFKEIYAMVDEMGREMTKSGYRPSTSEVLLDINEEDKEDTLNRHS 540
           DNEIYEFVAGDKSHKQ KEIY MVDEMGREM KSGYRPSTSEVLLDINEEDKED+LNRHS
Sbjct: 481 DNEIYEFVAGDKSHKQHKEIYEMVDEMGREMKKSGYRPSTSEVLLDINEEDKEDSLNRHS 540

Query: 541 EKLAIAFGLLNTPPGTPIRIVKNLRVCTDCHSASKFISKIYDREIIMRDRNRFHHFK 593
           EKLAIAFGLL TPPGTPIRIVKNLRVC+DCHSASKFISKIYDREIIMRDRNRFHHFK
Sbjct: 541 EKLAIAFGLLRTPPGTPIRIVKNLRVCSDCHSASKFISKIYDREIIMRDRNRFHHFK 596

[Close]
BLAST of Carg03921 vs. NCBI nr
Match: XP_022131416.1 (pentatricopeptide repeat-containing protein At4g21065-like [Momordica charantia] >XP_022131419.1 pentatricopeptide repeat-containing protein At4g21065-like [Momordica charantia] >XP_022131420.1 pentatricopeptide repeat-containing protein At4g21065-like [Momordica charantia])

HSP 1 Score: 1080.9 bits (2794), Expect = 0.0e+00
Identity = 541/597 (90.62%), Postives = 566/597 (94.81%), Query Frame = 0 

Query: 1   MQSQF----LLRVINNAAA-SRSNPRAAEQNCLALLQACNSLPKLTQIHAHIFKLGLRNN 60
           MQSQF    LL  INNA   SR+NPRAAEQ+CLALLQACN+LPKL QIHAHI KLGL NN
Sbjct: 1   MQSQFSKTKLLLAINNAPVFSRANPRAAEQDCLALLQACNALPKLAQIHAHILKLGLHNN 60

Query: 61  PLVLTKFASISSVINATDYAASFLFSAEADTRLYDAFLFNTLIRAFAQTGHSKARALSLY 120
           PLVLTKFASISSVI+ATDYAASFLFSA ADTRLYDAFLFNTLIRA+AQTGHSK +AL+LY
Sbjct: 61  PLVLTKFASISSVISATDYAASFLFSAGADTRLYDAFLFNTLIRAYAQTGHSKPKALALY 120

Query: 121 GIMLHDGILPNKFTYPFVLKACAGLEVLSLGQSVHGSVVKFGFDHDVHVQNTMVHMYSCC 180
           G+ML DGILPNKFTYPFVLKACAGLEVL+LGQSVHGSVVKFGFD DVHV+NTMVHMYSCC
Sbjct: 121 GLMLRDGILPNKFTYPFVLKACAGLEVLNLGQSVHGSVVKFGFDRDVHVRNTMVHMYSCC 180

Query: 181 SGGIIFARKVFDEMPKSDSVTWSAMIGGYARVGRSTEAVALFREMQMAEVCPDEITMVSV 240
           +GGI FARKVFDEMPKSDSVTWSAMIGGYARVGR TEAV+LFREMQ+AEVCPDEITMVS+
Sbjct: 181 AGGINFARKVFDEMPKSDSVTWSAMIGGYARVGRPTEAVSLFREMQLAEVCPDEITMVSI 240

Query: 241 LKACTDLGALELGKWIEAYIERQGIQKPVEVSNALIDMFAKCGDIGKALKLFRAMSDKTI 300
           L ACTDLGALELGKW+EAYIERQGIQKP EVSNALIDMFAKCGDI KALKLF+ MS+KTI
Sbjct: 241 LSACTDLGALELGKWLEAYIERQGIQKPEEVSNALIDMFAKCGDISKALKLFKTMSEKTI 300

Query: 301 VSWTSVIVGMAMHGRGQEAISLFEEMIGSSGVAPDDVAFIGLLSACSHSGLVERGREYFN 360
           VSWTSVIVGMAMHGRGQ+AI LFEEMIG SGVAPDDVAFIGLLSACSHSG+VERGREYF+
Sbjct: 301 VSWTSVIVGMAMHGRGQDAICLFEEMIG-SGVAPDDVAFIGLLSACSHSGMVERGREYFS 360

Query: 361 SMMKKYKLVPKIEHYGCMVDMYCRTGLVKEALEFVHNMPIEPNPVILRTLVSACRGHGEF 420
           SM KKYKLVPKIEHYGCMVDM+CRTGLVKEALEFVH+MPIEPN VILRTLVSACRGHGEF
Sbjct: 361 SMTKKYKLVPKIEHYGCMVDMFCRTGLVKEALEFVHSMPIEPNAVILRTLVSACRGHGEF 420

Query: 421 KLGEKITKLLMRHEPMHESNYVLLSNIYAKMFNWEKKTKIREVMEVKGMKKVPGSTMIEI 480
           +LGEKITK LMRHEPMHESNYVLLSNIYAKM +WEKKTKIREVMEVKGMKKVPGSTMIEI
Sbjct: 421 QLGEKITKQLMRHEPMHESNYVLLSNIYAKMLSWEKKTKIREVMEVKGMKKVPGSTMIEI 480

Query: 481 DNEIYEFVAGDKSHKQFKEIYAMVDEMGREMTKSGYRPSTSEVLLDINEEDKEDTLNRHS 540
           DNEIYEFVAGDKSHKQFKEIY MVDEMGREM KSGYRPSTSEVLLDINEEDKEDTLNRH 
Sbjct: 481 DNEIYEFVAGDKSHKQFKEIYEMVDEMGREMKKSGYRPSTSEVLLDINEEDKEDTLNRHG 540

Query: 541 EKLAIAFGLLNTPPGTPIRIVKNLRVCTDCHSASKFISKIYDREIIMRDRNRFHHFK 593
           EKLAIAFGLLNTPPGTPIRIVKNLRVC+DCHSASKFISKIYDREIIMRDRNRFHHFK
Sbjct: 541 EKLAIAFGLLNTPPGTPIRIVKNLRVCSDCHSASKFISKIYDREIIMRDRNRFHHFK 596

[Close]
BLAST of Carg03921 vs. TAIR10
Match: AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 460.3 bits (1183), Expect = 1.9e-129
Identity = 261/701 (37.23%), Postives = 371/701 (52.92%), Query Frame = 0 

Query: 28  LALLQACNSLPKLTQIHAHIFKLGLRNNPLVLTK---FASISSVINATDYAASFLFSAEA 87
           L+LL  C +L  L  IHA + K+GL N    L+K   F  +S       YA S   + + 
Sbjct: 37  LSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQE 96

Query: 88  DTRLYDAFLFNTLIRAFAQTGHSKARALSLYGIMLHDGILPNKFTYPFVLKACAGLEVLS 147
              L    ++NT+ R  A +      AL LY  M+  G+LPN +T+PFVLK+CA  +   
Sbjct: 97  PNLL----IWNTMFRGHALSS-DPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFK 156

Query: 148 LGQSVHGSVVKFGFDHDVHVQNTMVHMY-------------------------------- 207
            GQ +HG V+K G D D++V  +++ MY                                
Sbjct: 157 EGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRXXXXXXXXXXXXX 216

Query: 208 ------------------------------------------------------------ 267
                                                                       
Sbjct: 217 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKTNVRPDESTMVT 276

Query: 268 --SCC--SGGIIFARKV-----------------------------------FDEMPKSD 327
             S C  SG I   R+V                                   F+ +P  D
Sbjct: 277 VVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKD 336

Query: 328 SVTWSAMIGGYARVGRSTEAVALFREMQMAEVCPDEITMVSVLKACTDLGALELGKWIEA 387
            ++W+ +IGGY  +    EA+ LF+EM  +   P+++TM+S+L AC  LGA+++G+WI  
Sbjct: 337 VISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHV 396

Query: 388 YIER--QGIQKPVEVSNALIDMFAKCGDIGKALKLFRAMSDKTIVSWTSVIVGMAMHGRG 447
           YI++  +G+     +  +LIDM+AKCGDI  A ++F ++  K++ SW ++I G AMHGR 
Sbjct: 397 YIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRA 456

Query: 448 QEAISLFEEMIGSSGVAPDDVAFIGLLSACSHSGLVERGREYFNSMMKKYKLVPKIEHYG 507
             +  LF  M    G+ PDD+ F+GLLSACSHSG+++ GR  F +M + YK+ PK+EHYG
Sbjct: 457 DASFDLFSRM-RKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYG 516

Query: 508 CMVDMYCRTGLVKEALEFVHNMPIEPNPVILRTLVSACRGHGEFKLGEKITKLLMRHEPM 567
           CM+D+   +GL KEA E ++ M +EP+ VI  +L+ AC+ HG  +LGE   + L++ EP 
Sbjct: 517 CMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPE 576

Query: 568 HESNYVLLSNIYAKMFNWEKKTKIREVMEVKGMKKVPGSTMIEIDNEIYEFVAGDKSHKQ 593
           +  +YVLLSNIYA    W +  K R ++  KGMKKVPG + IEID+ ++EF+ GDK H +
Sbjct: 577 NPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPR 636

[Close]
BLAST of Carg03921 vs. TAIR10
Match: AT1G59720.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 446.8 bits (1148), Expect = 2.2e-125
Identity = 250/598 (41.81%), Postives = 357/598 (59.70%), Query Frame = 0 

Query: 13  AAASRSNPRAAEQNCLALLQACNSLPKLTQIHAHIFKLGLRNNPLVL---TKFASISSVI 72
           ++ S S      Q   +L + C+ + +L Q+HA   +      P  L    K   +SS  
Sbjct: 37  SSPSASTAGNHHQRIFSLAETCSDMSQLKQLHAFTLRTTYPEEPATLFLYGKILQLSSSF 96

Query: 73  NATDYAASFLFSAEADTRLYDAFLFNTLIRAFAQTGHSKARALSLYGIMLHDG-ILPNKF 132
           +  +YA     S E     + +F++NTLIRA A     K  A  LY  ML  G   P+K 
Sbjct: 97  SDVNYAFRVFDSIEN----HSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKH 156

Query: 133 TYPFVLKACAGLEVLSLGQSVHGSVVKFGFDHDVHVQNTMVHMYSCCSGGIIFARKVFDE 192
           T+PFVLKACA +   S G+ VH  +VK GF  DV+V N ++H+Y  C G +  ARKVFDE
Sbjct: 157 TFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSC-GCLDLARKVFDE 216

Query: 193 MPKSDSVTWSAMIGGYARVGRSTEAVALFREMQMAEVCPDEITMVSVLKACTDLGALELG 252
           MP+   V+W++MI    R G    A+ LFREMQ +   PD  TM SVL AC  LG+L LG
Sbjct: 217 MPERSLVSWNSMIDALVRFGEYDSALQLFREMQRS-FEPDGYTMQSVLSACAGLGSLSLG 276

Query: 253 KWIEAYIERQ---GIQKPVEVSNALIDMFAKCGDIGKALKLFRAMSDKTIVSWTSVIVGM 312
            W  A++ R+    +   V V N+LI+M+ KCG +  A ++F+ M  + + SW ++I+G 
Sbjct: 277 TWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGF 336

Query: 313 AMHGRGQEAISLFEEMIGS-SGVAPDDVAFIGLLSACSHSGLVERGREYFNSMMKKYKLV 372
           A HGR +EA++ F+ M+     V P+ V F+GLL AC+H G V +GR+YF+ M++ Y + 
Sbjct: 337 ATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIE 396

Query: 373 PKIEHYGCMVDMYCRTGLVKEALEFVHNMPIEPNPVILRTLVSACRGHG-EFKLGEKITK 432
           P +EHYGC+VD+  R G + EA++ V +MP++P+ VI R+L+ AC   G   +L E+I +
Sbjct: 397 PALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIAR 456

Query: 433 LLMRHEPMHESN-------YVLLSNIYAKMFNWEKKTKIREVMEVKGMKKVPGSTMIEID 492
            ++  +  +ES+       YVLLS +YA    W     +R++M   G++K PG + IEI+
Sbjct: 457 NIIGTKEDNESSNGNCSGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCSSIEIN 516

Query: 493 NEIYEFVAGDKSHKQFKEIYAMVDEMGREMTKSGYRPSTSEV-LLD-INEEDKEDTLNRH 552
              +EF AGD SH Q K+IY  +  +   +   GY P  S+  L+D  N+  KE +L  H
Sbjct: 517 GISHEFFAGDTSHPQTKQIYQQLKVIDDRLRSIGYLPDRSQAPLVDATNDGSKEYSLRLH 576

Query: 553 SEKLAIAFGLLNTPPGTPIRIVKNLRVCTDCHSASKFISKIYDREIIMRDRNRFHHFK 593
           SE+LAIAFGL+N PP TPIRI KNLRVC DCH  +K ISK+++ EII+RDR RFHHFK
Sbjct: 577 SERLAIAFGLINLPPQTPIRIFKNLRVCNDCHEVTKLISKVFNTEIIVRDRVRFHHFK 628

[Close]
BLAST of Carg03921 vs. TAIR10
Match: AT1G31920.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 443.0 bits (1138), Expect = 3.1e-124
Identity = 232/576 (40.28%), Postives = 364/576 (63.19%), Query Frame = 0 

Query: 24  EQNCLALLQACNSLPKLTQIHAHIFKLGL-----RNNPLVLTKFASISSVINATDYAASF 83
           EQ CL LL+ C+++ +  Q+HA   KL L      +   VL K A  S   N+ +YAAS 
Sbjct: 30  EQECLYLLKRCHNIDEFKQVHARFIKLSLFYSSSFSASSVLAKCAH-SGWENSMNYAAS- 89

Query: 84  LFSAEADTRLYDAFLFNTLIRAFAQTGHSKARALSLYGIMLHDGILPNKFTYPFVLKACA 143
           +F    D   +D   FNT+IR +     S   AL  Y  M+  G  P+ FTYP +LKAC 
Sbjct: 90  IFRGIDDPCTFD---FNTMIRGYVNV-MSFEEALCFYNEMMQRGNEPDNFTYPCLLKACT 149

Query: 144 GLEVLSLGQSVHGSVVKFGFDHDVHVQNTMVHMYSCCSGGIIFARKVFDEMPKSDSVTWS 203
            L+ +  G+ +HG V K G + DV VQN++++MY  C G +  +  VF+++    + +WS
Sbjct: 150 RLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRC-GEMELSSAVFEKLESKTAASWS 209

Query: 204 AMIGGYARVGRSTEAVALFREM-QMAEVCPDEITMVSVLKACTDLGALELGKWIEAYIER 263
           +M+   A +G  +E + LFR M     +  +E  MVS L AC + GAL LG  I  ++ R
Sbjct: 210 SMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLR 269

Query: 264 QGIQKPVEVSNALIDMFAKCGDIGKALKLFRAMSDKTIVSWTSVIVGMAMHGRGQEAISL 323
              +  + V  +L+DM+ KCG + KAL +F+ M  +  ++++++I G+A+HG G+ A+ +
Sbjct: 270 NISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRM 329

Query: 324 FEEMIGSSGVAPDDVAFIGLLSACSHSGLVERGREYFNSMMKKYKLVPKIEHYGCMVDMY 383
           F +MI   G+ PD V ++ +L+ACSHSGLV+ GR  F  M+K+ K+ P  EHYGC+VD+ 
Sbjct: 330 FSKMI-KEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLL 389

Query: 384 CRTGLVKEALEFVHNMPIEPNPVILRTLVSACRGHGEFKLGEKITKLLMRHEPMHESNYV 443
            R GL++EALE + ++PIE N VI RT +S CR     +LG+   + L++    +  +Y+
Sbjct: 390 GRAGLLEEALETIQSIPIEKNDVIWRTFLSQCRVRQNIELGQIAAQELLKLSSHNPGDYL 449

Query: 444 LLSNIYAKMFNWEKKTKIREVMEVKGMKKVPGSTMIEIDNEIYEFVAGDKSHKQFKEIYA 503
           L+SN+Y++   W+   + R  + +KG+K+ PG +++E+  + + FV+ D+SH + KEIY 
Sbjct: 450 LISNLYSQGQMWDDVARTRTEIAIKGLKQTPGFSIVELKGKTHRFVSQDRSHPKCKEIYK 509

Query: 504 MVDEMGREMTKSGYRPSTSEVLLDINEEDKEDTLNRHSEKLAIAFGLLNTPPGTPIRIVK 563
           M+ +M  ++   GY P  +++LL+++EE+K++ L  HS+K+AIAFGLL TPPG+ I+I +
Sbjct: 510 MLHQMEWQLKFEGYSPDLTQILLNVDEEEKKERLKGHSQKVAIAFGLLYTPPGSIIKIAR 569

Query: 564 NLRVCTDCHSASKFISKIYDREIIMRDRNRFHHFKG 594
           NLR+C+DCH+ +K IS IY+REI++RDRNRFH FKG
Sbjct: 570 NLRMCSDCHTYTKKISMIYEREIVVRDRNRFHLFKG 597

[Close]
BLAST of Carg03921 vs. TAIR10
Match: AT2G02980.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 441.8 bits (1135), Expect = 6.9e-124
Identity = 237/571 (41.51%), Postives = 354/571 (62.00%), Query Frame = 0 

Query: 25  QNCLALLQACNSLPKLTQIHAHIFKLGLRNNPLV--LTKFASISSVINATDYAASFLFSA 84
           QN + L+  CNSL +L QI A+  K  + +   V  L  F + S   ++  Y A  LF A
Sbjct: 30  QNPILLISKCNSLRELMQIQAYAIKSHIEDVSFVAKLINFCTESPTESSMSY-ARHLFEA 89

Query: 85  EADTRLYDAFLFNTLIRAFAQTGHSKARALSLYGIMLHDGILPNKFTYPFVLKACAGLEV 144
            ++    D  +FN++ R +++   +     SL+  +L DGILP+ +T+P +LKACA  + 
Sbjct: 90  MSEP---DIVIFNSMARGYSRF-TNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKA 149

Query: 145 LSLGQSVHGSVVKFGFDHDVHVQNTMVHMYSCCSGGIIFARKVFDEMPKSDSVTWSAMIG 204
           L  G+ +H   +K G D +V+V  T+++MY+ C   +  AR VFD + +   V ++AMI 
Sbjct: 150 LEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECE-DVDSARCVFDRIVEPCVVCYNAMIT 209

Query: 205 GYARVGRSTEAVALFREMQMAEVCPDEITMVSVLKACTDLGALELGKWIEAYIERQGIQK 264
           GYAR  R  EA++LFREMQ   + P+EIT++SVL +C  LG+L+LGKWI  Y ++    K
Sbjct: 210 GYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCK 269

Query: 265 PVEVSNALIDMFAKCGDIGKALKLFRAMSDKTIVSWTSVIVGMAMHGRGQEAISLFEEMI 324
            V+V+ ALIDMFAKCG +  A+ +F  M  K   +W S                      
Sbjct: 270 YVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAW-SXXXXXXXXXXXXXXXXXXXXXX 329

Query: 325 GSSGVAPDDVAFIGLLSACSHSGLVERGREYFNSMMKKYKLVPKIEHYGCMVDMYCRTGL 384
                 PD++ F+GLL+ACSH+G VE GR+YF+ M+ K+ +VP I+HYG MVD+  R G 
Sbjct: 330 XXXXXQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGN 389

Query: 385 VKEALEFVHNMPIEPNPVILRTLVSACRGHGEFKLGEKITKLLMRHEPMHESNYVLLSNI 444
           +++A EF+  +PI P P++ R L++AC  H    L EK+++ +   +  H  +YV+LSN+
Sbjct: 390 LEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNL 449

Query: 445 YAKMFNWEKKTKIREVMEVKGMKKVPGSTMIEIDNEIYEFVAGDKSHKQFKEIYAMVDEM 504
           YA+   WE    +R+VM+ +   KVPG + IE++N ++EF +GD       +++  +DEM
Sbjct: 450 YARNKKWEYVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEM 509

Query: 505 GREMTKSGYRPSTSEVL-LDINEEDKEDTLNRHSEKLAIAFGLLNTPPGTPIRIVKNLRV 564
            +E+  SGY P TS V+  ++N+++KE TL  HSEKLAI FGLLNTPPGT IR+VKNLRV
Sbjct: 510 VKELKLSGYVPDTSMVVHANMNDQEKEITLRYHSEKLAITFGLLNTPPGTTIRVVKNLRV 569

Query: 565 CTDCHSASKFISKIYDREIIMRDRNRFHHFK 593
           C DCH+A+K IS I+ R++++RD  RFHHF+
Sbjct: 570 CRDCHNAAKLISLIFGRKVVLRDVQRFHHFE 593

[Close]
BLAST of Carg03921 vs. TAIR10
Match: AT5G48910.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 440.3 bits (1131), Expect = 2.0e-123
Identity = 244/624 (39.10%), Postives = 370/624 (59.29%), Query Frame = 0 

Query: 18  SNPRAAEQNCLALLQACNSLPKLTQIHAHIFKLGLRNNPLV---LTKFASISSVINATDY 77
           S+P +   +    +  C ++  L+QIHA   K G   + L    + +F + S + +    
Sbjct: 17  SSPASHPSSLFPQINNCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLD 76

Query: 78  AASFLFSAEADTRLYDAFLFNTLIRAFAQTGHSKAR-ALSLYGIMLHDGIL-PNKFTYPF 137
            A  +F+        + F +NT+IR F+++   KA  A++L+  M+ D  + PN+FT+P 
Sbjct: 77  YAHKIFNQMPQR---NCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPS 136

Query: 138 VLKACAGLEVLSLGQSVHGSVVKFGFDHDVHVQNTMVHMYSCC----SGGIIFARKVFD- 197
           VLKACA    +  G+ +HG  +K+GF  D  V + +V MY  C       ++F + + + 
Sbjct: 137 VLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEK 196

Query: 198 ------EMPKSDS--VTWSAMIGGYARVGRSTEAVALF---------------------- 257
                 +  K D   V W+ MI GY R+G    A  LF                      
Sbjct: 197 DMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDXXXXXXXXXXXXXXXXXXXXX 256

Query: 258 ---------REMQMAEVCPDEITMVSVLKACTDLGALELGKWIEAYIERQGIQKPVEVSN 317
                          ++ P+ +T+VSVL A + LG+LELG+W+  Y E  GI+    + +
Sbjct: 257 XXXXXXXXXXXXXXGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGS 316

Query: 318 ALIDMFAKCGDIGKALKLFRAMSDKTIVSWTSVIVGMAMHGRGQEAISLFEEMIGSSGVA 377
           ALIDM++KCG I KA+ +F  +  + +++W+++I G A+HG+  +AI  F +M   +GV 
Sbjct: 317 ALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKM-RQAGVR 376

Query: 378 PDDVAFIGLLSACSHSGLVERGREYFNSMMKKYKLVPKIEHYGCMVDMYCRTGLVKEALE 437
           P DVA+I LL+ACSH GLVE GR YF+ M+    L P+IEHYGCMVD+  R+GL+ EA E
Sbjct: 377 PSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEE 436

Query: 438 FVHNMPIEPNPVILRTLVSACRGHGEFKLGEKITKLLMRHEPMHESNYVLLSNIYAKMFN 497
           F+ NMPI+P+ VI + L+ ACR  G  ++G+++  +LM   P     YV LSN+YA   N
Sbjct: 437 FILNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGN 496

Query: 498 WEKKTKIREVMEVKGMKKVPGSTMIEIDNEIYEFVAGDKSHKQFKEIYAMVDEMGREMTK 557
           W + +++R  M+ K ++K PG ++I+ID  ++EFV  D SH + KEI +M+ E+  ++  
Sbjct: 497 WSEVSEMRLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRL 556

Query: 558 SGYRPSTSEVLLDINEEDKEDTLNRHSEKLAIAFGLLNTPPGTPIRIVKNLRVCTDCHSA 593
           +GYRP T++VLL++ EEDKE+ L+ HSEK+A AFGL++T PG PIRIVKNLR+C DCHS+
Sbjct: 557 AGYRPITTQVLLNLEEEDKENVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSS 616

[Close]
BLAST of Carg03921 vs. Swiss-Prot
Match: sp|Q9LN01|PPR21_ARATH (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)

HSP 1 Score: 460.3 bits (1183), Expect = 3.4e-128
Identity = 261/701 (37.23%), Postives = 371/701 (52.92%), Query Frame = 0 

Query: 28  LALLQACNSLPKLTQIHAHIFKLGLRNNPLVLTK---FASISSVINATDYAASFLFSAEA 87
           L+LL  C +L  L  IHA + K+GL N    L+K   F  +S       YA S   + + 
Sbjct: 37  LSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQE 96

Query: 88  DTRLYDAFLFNTLIRAFAQTGHSKARALSLYGIMLHDGILPNKFTYPFVLKACAGLEVLS 147
              L    ++NT+ R  A +      AL LY  M+  G+LPN +T+PFVLK+CA  +   
Sbjct: 97  PNLL----IWNTMFRGHALSS-DPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFK 156

Query: 148 LGQSVHGSVVKFGFDHDVHVQNTMVHMY-------------------------------- 207
            GQ +HG V+K G D D++V  +++ MY                                
Sbjct: 157 EGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRXXXXXXXXXXXXX 216

Query: 208 ------------------------------------------------------------ 267
                                                                       
Sbjct: 217 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKTNVRPDESTMVT 276

Query: 268 --SCC--SGGIIFARKV-----------------------------------FDEMPKSD 327
             S C  SG I   R+V                                   F+ +P  D
Sbjct: 277 VVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKD 336

Query: 328 SVTWSAMIGGYARVGRSTEAVALFREMQMAEVCPDEITMVSVLKACTDLGALELGKWIEA 387
            ++W+ +IGGY  +    EA+ LF+EM  +   P+++TM+S+L AC  LGA+++G+WI  
Sbjct: 337 VISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHV 396

Query: 388 YIER--QGIQKPVEVSNALIDMFAKCGDIGKALKLFRAMSDKTIVSWTSVIVGMAMHGRG 447
           YI++  +G+     +  +LIDM+AKCGDI  A ++F ++  K++ SW ++I G AMHGR 
Sbjct: 397 YIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRA 456

Query: 448 QEAISLFEEMIGSSGVAPDDVAFIGLLSACSHSGLVERGREYFNSMMKKYKLVPKIEHYG 507
             +  LF  M    G+ PDD+ F+GLLSACSHSG+++ GR  F +M + YK+ PK+EHYG
Sbjct: 457 DASFDLFSRM-RKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYG 516

Query: 508 CMVDMYCRTGLVKEALEFVHNMPIEPNPVILRTLVSACRGHGEFKLGEKITKLLMRHEPM 567
           CM+D+   +GL KEA E ++ M +EP+ VI  +L+ AC+ HG  +LGE   + L++ EP 
Sbjct: 517 CMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPE 576

Query: 568 HESNYVLLSNIYAKMFNWEKKTKIREVMEVKGMKKVPGSTMIEIDNEIYEFVAGDKSHKQ 593
           +  +YVLLSNIYA    W +  K R ++  KGMKKVPG + IEID+ ++EF+ GDK H +
Sbjct: 577 NPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPR 636

[Close]
BLAST of Carg03921 vs. Swiss-Prot
Match: sp|Q0WQW5|PPR85_ARATH (Pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H51 PE=1 SV=2)

HSP 1 Score: 446.8 bits (1148), Expect = 3.9e-124
Identity = 250/598 (41.81%), Postives = 357/598 (59.70%), Query Frame = 0 

Query: 13  AAASRSNPRAAEQNCLALLQACNSLPKLTQIHAHIFKLGLRNNPLVL---TKFASISSVI 72
           ++ S S      Q   +L + C+ + +L Q+HA   +      P  L    K   +SS  
Sbjct: 37  SSPSASTAGNHHQRIFSLAETCSDMSQLKQLHAFTLRTTYPEEPATLFLYGKILQLSSSF 96

Query: 73  NATDYAASFLFSAEADTRLYDAFLFNTLIRAFAQTGHSKARALSLYGIMLHDG-ILPNKF 132
           +  +YA     S E     + +F++NTLIRA A     K  A  LY  ML  G   P+K 
Sbjct: 97  SDVNYAFRVFDSIEN----HSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKH 156

Query: 133 TYPFVLKACAGLEVLSLGQSVHGSVVKFGFDHDVHVQNTMVHMYSCCSGGIIFARKVFDE 192
           T+PFVLKACA +   S G+ VH  +VK GF  DV+V N ++H+Y  C G +  ARKVFDE
Sbjct: 157 TFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSC-GCLDLARKVFDE 216

Query: 193 MPKSDSVTWSAMIGGYARVGRSTEAVALFREMQMAEVCPDEITMVSVLKACTDLGALELG 252
           MP+   V+W++MI    R G    A+ LFREMQ +   PD  TM SVL AC  LG+L LG
Sbjct: 217 MPERSLVSWNSMIDALVRFGEYDSALQLFREMQRS-FEPDGYTMQSVLSACAGLGSLSLG 276

Query: 253 KWIEAYIERQ---GIQKPVEVSNALIDMFAKCGDIGKALKLFRAMSDKTIVSWTSVIVGM 312
            W  A++ R+    +   V V N+LI+M+ KCG +  A ++F+ M  + + SW ++I+G 
Sbjct: 277 TWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGF 336

Query: 313 AMHGRGQEAISLFEEMIGS-SGVAPDDVAFIGLLSACSHSGLVERGREYFNSMMKKYKLV 372
           A HGR +EA++ F+ M+     V P+ V F+GLL AC+H G V +GR+YF+ M++ Y + 
Sbjct: 337 ATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIE 396

Query: 373 PKIEHYGCMVDMYCRTGLVKEALEFVHNMPIEPNPVILRTLVSACRGHG-EFKLGEKITK 432
           P +EHYGC+VD+  R G + EA++ V +MP++P+ VI R+L+ AC   G   +L E+I +
Sbjct: 397 PALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIAR 456

Query: 433 LLMRHEPMHESN-------YVLLSNIYAKMFNWEKKTKIREVMEVKGMKKVPGSTMIEID 492
            ++  +  +ES+       YVLLS +YA    W     +R++M   G++K PG + IEI+
Sbjct: 457 NIIGTKEDNESSNGNCSGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCSSIEIN 516

Query: 493 NEIYEFVAGDKSHKQFKEIYAMVDEMGREMTKSGYRPSTSEV-LLD-INEEDKEDTLNRH 552
              +EF AGD SH Q K+IY  +  +   +   GY P  S+  L+D  N+  KE +L  H
Sbjct: 517 GISHEFFAGDTSHPQTKQIYQQLKVIDDRLRSIGYLPDRSQAPLVDATNDGSKEYSLRLH 576

Query: 553 SEKLAIAFGLLNTPPGTPIRIVKNLRVCTDCHSASKFISKIYDREIIMRDRNRFHHFK 593
           SE+LAIAFGL+N PP TPIRI KNLRVC DCH  +K ISK+++ EII+RDR RFHHFK
Sbjct: 577 SERLAIAFGLINLPPQTPIRIFKNLRVCNDCHEVTKLISKVFNTEIIVRDRVRFHHFK 628

[Close]
BLAST of Carg03921 vs. Swiss-Prot
Match: sp|Q9C6T2|PPR68_ARATH (Pentatricopeptide repeat-containing protein At1g31920 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H11 PE=2 SV=1)

HSP 1 Score: 443.0 bits (1138), Expect = 5.6e-123
Identity = 232/576 (40.28%), Postives = 364/576 (63.19%), Query Frame = 0 

Query: 24  EQNCLALLQACNSLPKLTQIHAHIFKLGL-----RNNPLVLTKFASISSVINATDYAASF 83
           EQ CL LL+ C+++ +  Q+HA   KL L      +   VL K A  S   N+ +YAAS 
Sbjct: 30  EQECLYLLKRCHNIDEFKQVHARFIKLSLFYSSSFSASSVLAKCAH-SGWENSMNYAAS- 89

Query: 84  LFSAEADTRLYDAFLFNTLIRAFAQTGHSKARALSLYGIMLHDGILPNKFTYPFVLKACA 143
           +F    D   +D   FNT+IR +     S   AL  Y  M+  G  P+ FTYP +LKAC 
Sbjct: 90  IFRGIDDPCTFD---FNTMIRGYVNV-MSFEEALCFYNEMMQRGNEPDNFTYPCLLKACT 149

Query: 144 GLEVLSLGQSVHGSVVKFGFDHDVHVQNTMVHMYSCCSGGIIFARKVFDEMPKSDSVTWS 203
            L+ +  G+ +HG V K G + DV VQN++++MY  C G +  +  VF+++    + +WS
Sbjct: 150 RLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRC-GEMELSSAVFEKLESKTAASWS 209

Query: 204 AMIGGYARVGRSTEAVALFREM-QMAEVCPDEITMVSVLKACTDLGALELGKWIEAYIER 263
           +M+   A +G  +E + LFR M     +  +E  MVS L AC + GAL LG  I  ++ R
Sbjct: 210 SMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLR 269

Query: 264 QGIQKPVEVSNALIDMFAKCGDIGKALKLFRAMSDKTIVSWTSVIVGMAMHGRGQEAISL 323
              +  + V  +L+DM+ KCG + KAL +F+ M  +  ++++++I G+A+HG G+ A+ +
Sbjct: 270 NISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRM 329

Query: 324 FEEMIGSSGVAPDDVAFIGLLSACSHSGLVERGREYFNSMMKKYKLVPKIEHYGCMVDMY 383
           F +MI   G+ PD V ++ +L+ACSHSGLV+ GR  F  M+K+ K+ P  EHYGC+VD+ 
Sbjct: 330 FSKMI-KEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLL 389

Query: 384 CRTGLVKEALEFVHNMPIEPNPVILRTLVSACRGHGEFKLGEKITKLLMRHEPMHESNYV 443
            R GL++EALE + ++PIE N VI RT +S CR     +LG+   + L++    +  +Y+
Sbjct: 390 GRAGLLEEALETIQSIPIEKNDVIWRTFLSQCRVRQNIELGQIAAQELLKLSSHNPGDYL 449

Query: 444 LLSNIYAKMFNWEKKTKIREVMEVKGMKKVPGSTMIEIDNEIYEFVAGDKSHKQFKEIYA 503
           L+SN+Y++   W+   + R  + +KG+K+ PG +++E+  + + FV+ D+SH + KEIY 
Sbjct: 450 LISNLYSQGQMWDDVARTRTEIAIKGLKQTPGFSIVELKGKTHRFVSQDRSHPKCKEIYK 509

Query: 504 MVDEMGREMTKSGYRPSTSEVLLDINEEDKEDTLNRHSEKLAIAFGLLNTPPGTPIRIVK 563
           M+ +M  ++   GY P  +++LL+++EE+K++ L  HS+K+AIAFGLL TPPG+ I+I +
Sbjct: 510 MLHQMEWQLKFEGYSPDLTQILLNVDEEEKKERLKGHSQKVAIAFGLLYTPPGSIIKIAR 569

Query: 564 NLRVCTDCHSASKFISKIYDREIIMRDRNRFHHFKG 594
           NLR+C+DCH+ +K IS IY+REI++RDRNRFH FKG
Sbjct: 570 NLRMCSDCHTYTKKISMIYEREIVVRDRNRFHLFKG 597

[Close]
BLAST of Carg03921 vs. Swiss-Prot
Match: sp|Q8LK93|PP145_ARATH (Pentatricopeptide repeat-containing protein At2g02980, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H26 PE=2 SV=2)

HSP 1 Score: 441.8 bits (1135), Expect = 1.2e-122
Identity = 237/571 (41.51%), Postives = 354/571 (62.00%), Query Frame = 0 

Query: 25  QNCLALLQACNSLPKLTQIHAHIFKLGLRNNPLV--LTKFASISSVINATDYAASFLFSA 84
           QN + L+  CNSL +L QI A+  K  + +   V  L  F + S   ++  Y A  LF A
Sbjct: 30  QNPILLISKCNSLRELMQIQAYAIKSHIEDVSFVAKLINFCTESPTESSMSY-ARHLFEA 89

Query: 85  EADTRLYDAFLFNTLIRAFAQTGHSKARALSLYGIMLHDGILPNKFTYPFVLKACAGLEV 144
            ++    D  +FN++ R +++   +     SL+  +L DGILP+ +T+P +LKACA  + 
Sbjct: 90  MSEP---DIVIFNSMARGYSRF-TNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKA 149

Query: 145 LSLGQSVHGSVVKFGFDHDVHVQNTMVHMYSCCSGGIIFARKVFDEMPKSDSVTWSAMIG 204
           L  G+ +H   +K G D +V+V  T+++MY+ C   +  AR VFD + +   V ++AMI 
Sbjct: 150 LEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECE-DVDSARCVFDRIVEPCVVCYNAMIT 209

Query: 205 GYARVGRSTEAVALFREMQMAEVCPDEITMVSVLKACTDLGALELGKWIEAYIERQGIQK 264
           GYAR  R  EA++LFREMQ   + P+EIT++SVL +C  LG+L+LGKWI  Y ++    K
Sbjct: 210 GYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCK 269

Query: 265 PVEVSNALIDMFAKCGDIGKALKLFRAMSDKTIVSWTSVIVGMAMHGRGQEAISLFEEMI 324
            V+V+ ALIDMFAKCG +  A+ +F  M  K   +W S                      
Sbjct: 270 YVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAW-SXXXXXXXXXXXXXXXXXXXXXX 329

Query: 325 GSSGVAPDDVAFIGLLSACSHSGLVERGREYFNSMMKKYKLVPKIEHYGCMVDMYCRTGL 384
                 PD++ F+GLL+ACSH+G VE GR+YF+ M+ K+ +VP I+HYG MVD+  R G 
Sbjct: 330 XXXXXQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGN 389

Query: 385 VKEALEFVHNMPIEPNPVILRTLVSACRGHGEFKLGEKITKLLMRHEPMHESNYVLLSNI 444
           +++A EF+  +PI P P++ R L++AC  H    L EK+++ +   +  H  +YV+LSN+
Sbjct: 390 LEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNL 449

Query: 445 YAKMFNWEKKTKIREVMEVKGMKKVPGSTMIEIDNEIYEFVAGDKSHKQFKEIYAMVDEM 504
           YA+   WE    +R+VM+ +   KVPG + IE++N ++EF +GD       +++  +DEM
Sbjct: 450 YARNKKWEYVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEM 509

Query: 505 GREMTKSGYRPSTSEVL-LDINEEDKEDTLNRHSEKLAIAFGLLNTPPGTPIRIVKNLRV 564
            +E+  SGY P TS V+  ++N+++KE TL  HSEKLAI FGLLNTPPGT IR+VKNLRV
Sbjct: 510 VKELKLSGYVPDTSMVVHANMNDQEKEITLRYHSEKLAITFGLLNTPPGTTIRVVKNLRV 569

Query: 565 CTDCHSASKFISKIYDREIIMRDRNRFHHFK 593
           C DCH+A+K IS I+ R++++RD  RFHHF+
Sbjct: 570 CRDCHNAAKLISLIFGRKVVLRDVQRFHHFE 593

[Close]
BLAST of Carg03921 vs. Swiss-Prot
Match: sp|Q9FI80|PP425_ARATH (Pentatricopeptide repeat-containing protein At5g48910 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H38 PE=2 SV=1)

HSP 1 Score: 440.3 bits (1131), Expect = 3.6e-122
Identity = 244/624 (39.10%), Postives = 370/624 (59.29%), Query Frame = 0 

Query: 18  SNPRAAEQNCLALLQACNSLPKLTQIHAHIFKLGLRNNPLV---LTKFASISSVINATDY 77
           S+P +   +    +  C ++  L+QIHA   K G   + L    + +F + S + +    
Sbjct: 17  SSPASHPSSLFPQINNCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLD 76

Query: 78  AASFLFSAEADTRLYDAFLFNTLIRAFAQTGHSKAR-ALSLYGIMLHDGIL-PNKFTYPF 137
            A  +F+        + F +NT+IR F+++   KA  A++L+  M+ D  + PN+FT+P 
Sbjct: 77  YAHKIFNQMPQR---NCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPS 136

Query: 138 VLKACAGLEVLSLGQSVHGSVVKFGFDHDVHVQNTMVHMYSCC----SGGIIFARKVFD- 197
           VLKACA    +  G+ +HG  +K+GF  D  V + +V MY  C       ++F + + + 
Sbjct: 137 VLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEK 196

Query: 198 ------EMPKSDS--VTWSAMIGGYARVGRSTEAVALF---------------------- 257
                 +  K D   V W+ MI GY R+G    A  LF                      
Sbjct: 197 DMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDXXXXXXXXXXXXXXXXXXXXX 256

Query: 258 ---------REMQMAEVCPDEITMVSVLKACTDLGALELGKWIEAYIERQGIQKPVEVSN 317
                          ++ P+ +T+VSVL A + LG+LELG+W+  Y E  GI+    + +
Sbjct: 257 XXXXXXXXXXXXXXGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGS 316

Query: 318 ALIDMFAKCGDIGKALKLFRAMSDKTIVSWTSVIVGMAMHGRGQEAISLFEEMIGSSGVA 377
           ALIDM++KCG I KA+ +F  +  + +++W+++I G A+HG+  +AI  F +M   +GV 
Sbjct: 317 ALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKM-RQAGVR 376

Query: 378 PDDVAFIGLLSACSHSGLVERGREYFNSMMKKYKLVPKIEHYGCMVDMYCRTGLVKEALE 437
           P DVA+I LL+ACSH GLVE GR YF+ M+    L P+IEHYGCMVD+  R+GL+ EA E
Sbjct: 377 PSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEE 436

Query: 438 FVHNMPIEPNPVILRTLVSACRGHGEFKLGEKITKLLMRHEPMHESNYVLLSNIYAKMFN 497
           F+ NMPI+P+ VI + L+ ACR  G  ++G+++  +LM   P     YV LSN+YA   N
Sbjct: 437 FILNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGN 496

Query: 498 WEKKTKIREVMEVKGMKKVPGSTMIEIDNEIYEFVAGDKSHKQFKEIYAMVDEMGREMTK 557
           W + +++R  M+ K ++K PG ++I+ID  ++EFV  D SH + KEI +M+ E+  ++  
Sbjct: 497 WSEVSEMRLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRL 556

Query: 558 SGYRPSTSEVLLDINEEDKEDTLNRHSEKLAIAFGLLNTPPGTPIRIVKNLRVCTDCHSA 593
           +GYRP T++VLL++ EEDKE+ L+ HSEK+A AFGL++T PG PIRIVKNLR+C DCHS+
Sbjct: 557 AGYRPITTQVLLNLEEEDKENVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSS 616

[Close]
BLAST of Carg03921 vs. TrEMBL
Match: tr|A0A1S3BC37|A0A1S3BC37_CUCME (pentatricopeptide repeat-containing protein At4g21065-like OS=Cucumis melo OX=3656 GN=LOC103488302 PE=4 SV=1)

HSP 1 Score: 1085.5 bits (2806), Expect = 0.0e+00
Identity = 545/597 (91.29%), Postives = 567/597 (94.97%), Query Frame = 0 

Query: 1   MQSQF----LLRVINNA-AASRSNPRAAEQNCLALLQACNSLPKLTQIHAHIFKLGLRNN 60
           MQSQF    LLR INN  A+S +NPRAAEQNCLALLQACN+LPKLTQIH HI KLGL NN
Sbjct: 1   MQSQFTKPKLLRTINNVLASSTTNPRAAEQNCLALLQACNALPKLTQIHTHIVKLGLHNN 60

Query: 61  PLVLTKFASISSVINATDYAASFLFSAEADTRLYDAFLFNTLIRAFAQTGHSKARALSLY 120
           PLVLTKFASISS+I+ATDYAASFLFSAEADTRLYDAFLFNTLIRA+AQTGHSK +AL+LY
Sbjct: 61  PLVLTKFASISSLIHATDYAASFLFSAEADTRLYDAFLFNTLIRAYAQTGHSKDKALALY 120

Query: 121 GIMLHDGILPNKFTYPFVLKACAGLEVLSLGQSVHGSVVKFGFDHDVHVQNTMVHMYSCC 180
           GIMLHDGILPNKFTYPFVLKACAGLEVL+LGQSVHGSVVKFGFD D+HVQNTMVHMYSCC
Sbjct: 121 GIMLHDGILPNKFTYPFVLKACAGLEVLNLGQSVHGSVVKFGFDCDIHVQNTMVHMYSCC 180

Query: 181 SGGIIFARKVFDEMPKSDSVTWSAMIGGYARVGRSTEAVALFREMQMAEVCPDEITMVSV 240
           +GGI  ARKVFDEMPKSDSVTWSAMIGGYARVGRSTEAVALFREMQMAEVCPDEITMVS+
Sbjct: 181 AGGINSARKVFDEMPKSDSVTWSAMIGGYARVGRSTEAVALFREMQMAEVCPDEITMVSM 240

Query: 241 LKACTDLGALELGKWIEAYIERQGIQKPVEVSNALIDMFAKCGDIGKALKLFRAMSDKTI 300
           L ACTDLGALELGKWIEAYIER GI KPVEVSNALIDMFAKCGDI KALKLFRAM++KTI
Sbjct: 241 LSACTDLGALELGKWIEAYIERHGIHKPVEVSNALIDMFAKCGDISKALKLFRAMNEKTI 300

Query: 301 VSWTSVIVGMAMHGRGQEAISLFEEMIGSSGVAPDDVAFIGLLSACSHSGLVERGREYFN 360
           VSWTSVIVGMAMHGRG+EA  LFEEMI +SGVAPDDVAFIGLLSACSHSGLVERGREYF 
Sbjct: 301 VSWTSVIVGMAMHGRGREATCLFEEMI-TSGVAPDDVAFIGLLSACSHSGLVERGREYFG 360

Query: 361 SMMKKYKLVPKIEHYGCMVDMYCRTGLVKEALEFVHNMPIEPNPVILRTLVSACRGHGEF 420
           SMMKKYKLVPKIEHYGCMVDMYCRTGLVKEALEFV NMPIEPNPVILRTLV+ACRGHGEF
Sbjct: 361 SMMKKYKLVPKIEHYGCMVDMYCRTGLVKEALEFVRNMPIEPNPVILRTLVTACRGHGEF 420

Query: 421 KLGEKITKLLMRHEPMHESNYVLLSNIYAKMFNWEKKTKIREVMEVKGMKKVPGSTMIEI 480
           KLGEKITKLLM+HEP+HESNYVLLSNIYAK  +WEKKTKIREVMEVKGMKKVPGSTMIEI
Sbjct: 421 KLGEKITKLLMKHEPLHESNYVLLSNIYAKTLSWEKKTKIREVMEVKGMKKVPGSTMIEI 480

Query: 481 DNEIYEFVAGDKSHKQFKEIYAMVDEMGREMTKSGYRPSTSEVLLDINEEDKEDTLNRHS 540
           DNEIYEFVAGDKSHKQ KEIY MVDEMGREM KSGYRPSTSEVLLDINEEDKED+LNRHS
Sbjct: 481 DNEIYEFVAGDKSHKQHKEIYEMVDEMGREMKKSGYRPSTSEVLLDINEEDKEDSLNRHS 540

Query: 541 EKLAIAFGLLNTPPGTPIRIVKNLRVCTDCHSASKFISKIYDREIIMRDRNRFHHFK 593
           EKLAIAFGLL TPPGTPIRIVKNLRVC+DCHSASKFISKIYDREIIMRDRNRFHHFK
Sbjct: 541 EKLAIAFGLLRTPPGTPIRIVKNLRVCSDCHSASKFISKIYDREIIMRDRNRFHHFK 596

[Close]
BLAST of Carg03921 vs. TrEMBL
Match: tr|A0A0A0LQ71|A0A0A0LQ71_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G381680 PE=4 SV=1)

HSP 1 Score: 1078.5 bits (2788), Expect = 0.0e+00
Identity = 543/597 (90.95%), Postives = 562/597 (94.14%), Query Frame = 0 

Query: 1   MQSQF----LLRVINNA-AASRSNPRAAEQNCLALLQACNSLPKLTQIHAHIFKLGLRNN 60
           MQSQF    LLR INN  A+S  NPRA EQNCLALLQACN+LPKLTQIH HI KLGL NN
Sbjct: 1   MQSQFTKPKLLRTINNVLASSTPNPRAPEQNCLALLQACNALPKLTQIHTHILKLGLHNN 60

Query: 61  PLVLTKFASISSVINATDYAASFLFSAEADTRLYDAFLFNTLIRAFAQTGHSKARALSLY 120
           PLVLTKFASISS+I+ATDYAASFLFSAEADTRLYDAFLFNTLIRA+AQTGHSK +AL+LY
Sbjct: 61  PLVLTKFASISSLIHATDYAASFLFSAEADTRLYDAFLFNTLIRAYAQTGHSKDKALALY 120

Query: 121 GIMLHDGILPNKFTYPFVLKACAGLEVLSLGQSVHGSVVKFGFDHDVHVQNTMVHMYSCC 180
           GIMLHD ILPNKFTYPFVLKACAGLEVL+LGQ+VHGSVVKFGFD D+HVQNTMVHMYSCC
Sbjct: 121 GIMLHDAILPNKFTYPFVLKACAGLEVLNLGQTVHGSVVKFGFDCDIHVQNTMVHMYSCC 180

Query: 181 SGGIIFARKVFDEMPKSDSVTWSAMIGGYARVGRSTEAVALFREMQMAEVCPDEITMVSV 240
           +GGI  ARKVFDEMPKSDSVTWSAMIGGYARVGRSTEAVALFREMQMAEVCPDEITMVS+
Sbjct: 181 AGGINSARKVFDEMPKSDSVTWSAMIGGYARVGRSTEAVALFREMQMAEVCPDEITMVSM 240

Query: 241 LKACTDLGALELGKWIEAYIERQGIQKPVEVSNALIDMFAKCGDIGKALKLFRAMSDKTI 300
           L ACTDLGALELGKWIEAYIER  I KPVEVSNALIDMFAKCGDI KALKLFRAM++KTI
Sbjct: 241 LSACTDLGALELGKWIEAYIERHEIHKPVEVSNALIDMFAKCGDISKALKLFRAMNEKTI 300

Query: 301 VSWTSVIVGMAMHGRGQEAISLFEEMIGSSGVAPDDVAFIGLLSACSHSGLVERGREYFN 360
           VSWTSVIVGMAMHGRGQEA  LFEEM  SSGVAPDDVAFIGLLSACSHSGLVERGREYF 
Sbjct: 301 VSWTSVIVGMAMHGRGQEATCLFEEMT-SSGVAPDDVAFIGLLSACSHSGLVERGREYFG 360

Query: 361 SMMKKYKLVPKIEHYGCMVDMYCRTGLVKEALEFVHNMPIEPNPVILRTLVSACRGHGEF 420
           SMMKKYKLVPKIEHYGCMVDMYCRTGLVKEALEFV NMPIEPNPVILRTLVSACRGHGEF
Sbjct: 361 SMMKKYKLVPKIEHYGCMVDMYCRTGLVKEALEFVRNMPIEPNPVILRTLVSACRGHGEF 420

Query: 421 KLGEKITKLLMRHEPMHESNYVLLSNIYAKMFNWEKKTKIREVMEVKGMKKVPGSTMIEI 480
           KLGEKITKLLM+HEP+HESNYVLLSNIYAK  +WEKKTKIREVMEVKGMKKVPGSTMIEI
Sbjct: 421 KLGEKITKLLMKHEPLHESNYVLLSNIYAKTLSWEKKTKIREVMEVKGMKKVPGSTMIEI 480

Query: 481 DNEIYEFVAGDKSHKQFKEIYAMVDEMGREMTKSGYRPSTSEVLLDINEEDKEDTLNRHS 540
           DNEIYEFVAGDKSHKQ KEIY MVDEMGREM KSGYRPSTSEVLLDINEEDKED+LNRHS
Sbjct: 481 DNEIYEFVAGDKSHKQHKEIYEMVDEMGREMKKSGYRPSTSEVLLDINEEDKEDSLNRHS 540

Query: 541 EKLAIAFGLLNTPPGTPIRIVKNLRVCTDCHSASKFISKIYDREIIMRDRNRFHHFK 593
           EKLAIAFGLL TPPGTPIRIVKNLRVC+DCHSASKFISKIYDREIIMRDRNRFHHFK
Sbjct: 541 EKLAIAFGLLRTPPGTPIRIVKNLRVCSDCHSASKFISKIYDREIIMRDRNRFHHFK 596

[Close]
BLAST of Carg03921 vs. TrEMBL
Match: tr|A0A251RE84|A0A251RE84_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G479200 PE=4 SV=1)

HSP 1 Score: 926.0 bits (2392), Expect = 4.4e-266
Identity = 450/587 (76.66%), Postives = 513/587 (87.39%), Query Frame = 0 

Query: 6   LLRVINNAAASRSNPRAAEQNCLALLQACNSLPKLTQIHAHIFKLGLRNNPLVLTKFASI 65
           L+R      A  +N R AEQ+CLALLQAC+++PKL Q+H H+ KLGLRNNPLVLTKF S 
Sbjct: 11  LIRPALKTTAIAANKREAEQSCLALLQACDAVPKLAQLHGHVLKLGLRNNPLVLTKFTST 70

Query: 66  SSVINATDYAASFLFSAEADTRLYDAFLFNTLIRAFAQTGHSKARALSLYGIMLHDGILP 125
           +S + A DYA+ FLF+ +ADT LYD+FLFNT+IRA+AQT H K +AL  Y +ML   +LP
Sbjct: 71  ASDLKAIDYASPFLFAPDADTHLYDSFLFNTIIRAYAQTSHGKHKALCFYNVMLEGAVLP 130

Query: 126 NKFTYPFVLKACAGLEVLSLGQSVHGSVVKFGFDHDVHVQNTMVHMYSCCSGGIIFARKV 185
           NKFTYPFVLKACAGL  L+LG SVHGSVVKFGFD DVHV NTMVHMY CCSGGI  ARKV
Sbjct: 131 NKFTYPFVLKACAGLGDLNLGTSVHGSVVKFGFDDDVHVCNTMVHMYCCCSGGIESARKV 190

Query: 186 FDEMPKSDSVTWSAMIGGYARVGRSTEAVALFREMQMAEVCPDEITMVSVLKACTDLGAL 245
           FDEMPK DSV+WSAMIGGY RVG ST+AV LFREMQM  V PDEITMVSVL ACTDLGAL
Sbjct: 191 FDEMPKLDSVSWSAMIGGYVRVGWSTDAVDLFREMQMVGVRPDEITMVSVLSACTDLGAL 250

Query: 246 ELGKWIEAYIERQGIQKPVEVSNALIDMFAKCGDIGKALKLFRAMSDKTIVSWTSVIVGM 305
           ELGKW+E+YI+++GIQK VE+SNALIDMF+KCGD+ KALKLFR MS +TIVSWTSVI G+
Sbjct: 251 ELGKWVESYIDKEGIQKTVELSNALIDMFSKCGDVEKALKLFRNMSGRTIVSWTSVIDGL 310

Query: 306 AMHGRGQEAISLFEEMIGSSGVAPDDVAFIGLLSACSHSGLVERGREYFNSMMKKYKLVP 365
           AMHGRG EA+SLFEEMIG +GVAPDDVAFIGL SACSHSGLVE+G+ YF+SM++K+ +VP
Sbjct: 311 AMHGRGMEAMSLFEEMIG-TGVAPDDVAFIGLFSACSHSGLVEKGKSYFSSMVEKFHIVP 370

Query: 366 KIEHYGCMVDMYCRTGLVKEALEFVHNMPIEPNPVILRTLVSACRGHGEFKLGEKITKLL 425
           KIEHYGCMVDM CR GLVKEALEF+  MPIEPNP++LRTL+SACR HGE KLGE ITK L
Sbjct: 371 KIEHYGCMVDMLCRAGLVKEALEFIQKMPIEPNPIVLRTLISACRAHGELKLGESITKEL 430

Query: 426 MRHEPMHESNYVLLSNIYAKMFNWEKKTKIREVMEVKGMKKVPGSTMIEIDNEIYEFVAG 485
           +R+EPM ESNYVLLSNIYAKM +WEKK KIREVM+ +GMKK+PGSTMIE+D+EIYEFVAG
Sbjct: 431 IRNEPMQESNYVLLSNIYAKMTHWEKKAKIREVMDKRGMKKIPGSTMIELDHEIYEFVAG 490

Query: 486 DKSHKQFKEIYAMVDEMGREMTKSGYRPSTSEVLLDINEEDKEDTLNRHSEKLAIAFGLL 545
           DKSHKQ+K+IY MVDEMGREM ++GY P+TSEVLLDI+EEDKED LNRHSEKLAIAF LL
Sbjct: 491 DKSHKQYKQIYEMVDEMGREMKRAGYIPTTSEVLLDIDEEDKEDALNRHSEKLAIAFALL 550

Query: 546 NTPPGTPIRIVKNLRVCTDCHSASKFISKIYDREIIMRDRNRFHHFK 593
           NTPPGTPIRIVKNLRVC DCHSA+KFISKIY+REI++RDRNRFHHFK
Sbjct: 551 NTPPGTPIRIVKNLRVCDDCHSATKFISKIYNREIVVRDRNRFHHFK 596

[Close]
BLAST of Carg03921 vs. TrEMBL
Match: tr|A0A2N9EE28|A0A2N9EE28_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS813 PE=4 SV=1)

HSP 1 Score: 920.6 bits (2378), Expect = 1.9e-264
Identity = 445/587 (75.81%), Postives = 518/587 (88.25%), Query Frame = 0 

Query: 6   LLRVINNAAASRSNPRAAEQNCLALLQACNSLPKLTQIHAHIFKLGLRNNPLVLTKFASI 65
           LLR I  A  + +  RAAEQ CLALL +CN+LPKL Q H +I KLGL+NNPLVLTKFAS 
Sbjct: 11  LLRTITTATLTITTKRAAEQRCLALLHSCNTLPKLAQTHTYILKLGLQNNPLVLTKFAST 70

Query: 66  SSVINATDYAASFLFSAEADTRLYDAFLFNTLIRAFAQTGHSKARALSLYGIMLHDGILP 125
           SS ++  DYA+SF+FS +ADTRLYD FLFNT+IRA+AQT HS+ +ALS Y +ML  G+LP
Sbjct: 71  SSDLHDIDYASSFIFSPDADTRLYDTFLFNTIIRAYAQTTHSRDQALSFYNVMLDYGVLP 130

Query: 126 NKFTYPFVLKACAGLEVLSLGQSVHGSVVKFGFDHDVHVQNTMVHMYSCCSGGIIFARKV 185
           NKFTYPFVLKACAGL  L+LG+SVHGSVVK GFD DVHVQNTMVHMY CC+GGI +A+KV
Sbjct: 131 NKFTYPFVLKACAGLGNLNLGKSVHGSVVKLGFDDDVHVQNTMVHMYCCCNGGINYAQKV 190

Query: 186 FDEMPKSDSVTWSAMIGGYARVGRSTEAVALFREMQMAEVCPDEITMVSVLKACTDLGAL 245
           FDEMPK DSV+WSAMIGGY R+G S++A+ LFR+MQMA V PDEITMV VL ACTDLGA 
Sbjct: 191 FDEMPKLDSVSWSAMIGGYVRLGWSSDAIGLFRKMQMAGVRPDEITMVLVLSACTDLGAF 250

Query: 246 ELGKWIEAYIERQGIQKPVEVSNALIDMFAKCGDIGKALKLFRAMSDKTIVSWTSVIVGM 305
           ELGKW+E+YIE++ +QK VE+ NALIDMFAKCGD+ KALKLFR M+++TIVSWTSVIVG+
Sbjct: 251 ELGKWVESYIEKEKVQKNVELCNALIDMFAKCGDVDKALKLFRDMNERTIVSWTSVIVGL 310

Query: 306 AMHGRGQEAISLFEEMIGSSGVAPDDVAFIGLLSACSHSGLVERGREYFNSMMKKYKLVP 365
           AMHGRG EA+SLF+EMIG +GVAPDDVAFIGLLSACSHSG VE GR+YF+ M+K++K+VP
Sbjct: 311 AMHGRGLEAVSLFKEMIG-AGVAPDDVAFIGLLSACSHSGSVENGRKYFDLMIKRFKIVP 370

Query: 366 KIEHYGCMVDMYCRTGLVKEALEFVHNMPIEPNPVILRTLVSACRGHGEFKLGEKITKLL 425
           KIEHYGCMVDM+CR GLVKEALEFV  M IEPNP++LRTL+SACR HGE KLGE ITK L
Sbjct: 371 KIEHYGCMVDMFCRAGLVKEALEFVQKMHIEPNPIVLRTLISACRAHGELKLGESITKQL 430

Query: 426 MRHEPMHESNYVLLSNIYAKMFNWEKKTKIREVMEVKGMKKVPGSTMIEIDNEIYEFVAG 485
           +R+EPMHESNYVLLSNIYAKM +WEKKTKIREVM+ KG+KK+PGSTMIE+D++IYEFVAG
Sbjct: 431 IRNEPMHESNYVLLSNIYAKMSHWEKKTKIREVMDKKGIKKIPGSTMIELDSKIYEFVAG 490

Query: 486 DKSHKQFKEIYAMVDEMGREMTKSGYRPSTSEVLLDINEEDKEDTLNRHSEKLAIAFGLL 545
           DKSH+Q+KEIY MVDEMGRE+ ++GY P+TSEVL DI+EEDKED LNRHSEKLAIAF L+
Sbjct: 491 DKSHRQYKEIYEMVDEMGRELKRAGYAPNTSEVLQDIDEEDKEDALNRHSEKLAIAFALI 550

Query: 546 NTPPGTPIRIVKNLRVCTDCHSASKFISKIYDREIIMRDRNRFHHFK 593
           NT PGTPIRIVKNLRVC DCHSA+KFISKIY+REI++RDRNRFHHFK
Sbjct: 551 NTQPGTPIRIVKNLRVCDDCHSATKFISKIYNREIVVRDRNRFHHFK 596

[Close]
BLAST of Carg03921 vs. TrEMBL
Match: tr|A0A2C9W3I9|A0A2C9W3I9_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_03G016100 PE=4 SV=1)

HSP 1 Score: 919.5 bits (2375), Expect = 4.1e-264
Identity = 442/574 (77.00%), Postives = 509/574 (88.68%), Query Frame = 0 

Query: 19  NPRAAEQNCLALLQACNSLPKLTQIHAHIFKLGLRNNPLVLTKFASISSVINATDYAASF 78
           N RAAEQ CLALL  CN+L KLTQ+H HI KLGL+NNPLVLTKF S SS + A DYA+SF
Sbjct: 30  NRRAAEQRCLALLHDCNTLSKLTQVHTHILKLGLQNNPLVLTKFTSTSSELYAIDYASSF 89

Query: 79  LFSAEADTRLYDAFLFNTLIRAFAQTGHSKARALSLYGIMLHDGILPNKFTYPFVLKACA 138
           LFS E+DTRLYD FLFNT+IRA+AQT HSK +A+ +Y +MLH  +LPNKFTYPFVLKACA
Sbjct: 90  LFSPESDTRLYDTFLFNTIIRAYAQTNHSKDKAICMYNLMLHYNVLPNKFTYPFVLKACA 149

Query: 139 GLEVLSLGQSVHGSVVKFGFDHDVHVQNTMVHMYSCCSGGIIFARKVFDEMPKSDSVTWS 198
           G+  L+LG+SVHGSV+KFGFD+DVHVQNTMVHMY C   GI FARKVFDEM K DSV+WS
Sbjct: 150 GIVNLNLGKSVHGSVIKFGFDNDVHVQNTMVHMYCCGREGIEFARKVFDEMRKMDSVSWS 209

Query: 199 AMIGGYARVGRSTEAVALFREMQMAEVCPDEITMVSVLKACTDLGALELGKWIEAYIERQ 258
           AMIGGYAR+GRS++AV+LFR+MQ+A VCPDEITMVSVL ACTDLGALELGKW+E+YIE++
Sbjct: 210 AMIGGYARLGRSSDAVSLFRQMQIAGVCPDEITMVSVLSACTDLGALELGKWVESYIEKE 269

Query: 259 GIQKPVEVSNALIDMFAKCGDIGKALKLFRAMSDKTIVSWTSVIVGMAMHGRGQEAISLF 318
            +QK VE+ NALIDMFAKCG++ KA+K FR+M ++TIVSWTSVIVG+AMHGRG EA++LF
Sbjct: 270 RVQKTVELCNALIDMFAKCGNVDKAIKFFRSMEERTIVSWTSVIVGLAMHGRGIEAVALF 329

Query: 319 EEMIGSSGVAPDDVAFIGLLSACSHSGLVERGREYFNSMMKKYKLVPKIEHYGCMVDMYC 378
           EEMIG SG+ PDDV FIGLLSACSHSGLV+RGR+YF+ M K + +VPKIEHYGCMVDM C
Sbjct: 330 EEMIG-SGMEPDDVVFIGLLSACSHSGLVDRGRDYFDMMGKNFGIVPKIEHYGCMVDMLC 389

Query: 379 RTGLVKEALEFVHNMPIEPNPVILRTLVSACRGHGEFKLGEKITKLLMRHEPMHESNYVL 438
           R GL+ EALEFV  MPIEPNPV+ RTL++ACR HGE KLGEKIT+ L+R EPMHESNYVL
Sbjct: 390 RAGLISEALEFVQQMPIEPNPVVWRTLINACRAHGELKLGEKITRQLIRSEPMHESNYVL 449

Query: 439 LSNIYAKMFNWEKKTKIREVMEVKGMKKVPGSTMIEIDNEIYEFVAGDKSHKQFKEIYAM 498
           LSNIYAKMFNWEKK +IRE+M++KGM+KVPGSTMIE+ NEIYEFVAGDKSH Q+ EIY M
Sbjct: 450 LSNIYAKMFNWEKKMRIRELMDMKGMRKVPGSTMIELGNEIYEFVAGDKSHNQYSEIYEM 509

Query: 499 VDEMGREMTKSGYRPSTSEVLLDINEEDKEDTLNRHSEKLAIAFGLLNTPPGTPIRIVKN 558
           VDEMGREM ++GY P+TSEVLLDI+ EDKEDTLN HSEKLAIAF LLNTPPGTPIRIVKN
Sbjct: 510 VDEMGREMKQAGYVPTTSEVLLDIDNEDKEDTLNTHSEKLAIAFALLNTPPGTPIRIVKN 569

Query: 559 LRVCTDCHSASKFISKIYDREIIMRDRNRFHHFK 593
           LRVC+DCH+A+KFISKIY+REIIMRDRNRFHHFK
Sbjct: 570 LRVCSDCHTATKFISKIYNREIIMRDRNRFHHFK 602

The following BLAST results are available for this feature:
BLAST of Carg03921 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023537014.10.0e+0099.33pentatricopeptide repeat-containing protein At4g21065-like [Cucurbita pepo subsp... [more]
XP_022951399.10.0e+0098.99pentatricopeptide repeat-containing protein At4g21065-like [Cucurbita moschata] ... [more]
XP_023002279.10.0e+0097.47pentatricopeptide repeat-containing protein At4g21065-like [Cucurbita maxima] >X... [more]
XP_008445200.10.0e+0091.29PREDICTED: pentatricopeptide repeat-containing protein At4g21065-like [Cucumis m... [more]
XP_022131416.10.0e+0090.62pentatricopeptide repeat-containing protein At4g21065-like [Momordica charantia]... [more]
BLAST of Carg03921 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G08070.11.9e-12937.23Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT1G59720.12.2e-12541.81Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT1G31920.13.1e-12440.28Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT2G02980.16.9e-12441.51Pentatricopeptide repeat (PPR) superfamily protein[more]
AT5G48910.12.0e-12339.10Pentatricopeptide repeat (PPR) superfamily protein[more]
BLAST of Carg03921 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9LN01|PPR21_ARATH3.4e-12837.23Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop... [more]
sp|Q0WQW5|PPR85_ARATH3.9e-12441.81Pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondri... [more]
sp|Q9C6T2|PPR68_ARATH5.6e-12340.28Pentatricopeptide repeat-containing protein At1g31920 OS=Arabidopsis thaliana OX... [more]
sp|Q8LK93|PP145_ARATH1.2e-12241.51Pentatricopeptide repeat-containing protein At2g02980, chloroplastic OS=Arabidop... [more]
sp|Q9FI80|PP425_ARATH3.6e-12239.10Pentatricopeptide repeat-containing protein At5g48910 OS=Arabidopsis thaliana OX... [more]
BLAST of Carg03921 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3BC37|A0A1S3BC37_CUCME0.0e+0091.29pentatricopeptide repeat-containing protein At4g21065-like OS=Cucumis melo OX=36... [more]
tr|A0A0A0LQ71|A0A0A0LQ71_CUCSA0.0e+0090.95Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G381680 PE=4 SV=1[more]
tr|A0A251RE84|A0A251RE84_PRUPE4.4e-26676.66Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G479200 PE=4 SV=1[more]
tr|A0A2N9EE28|A0A2N9EE28_FAGSY1.9e-26475.81Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS813 PE=4 SV=1[more]
tr|A0A2C9W3I9|A0A2C9W3I9_MANES4.1e-26477.00Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_03G016100 PE=4 SV=... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR032867DYW_dom
IPR011990TPR-like_helical_dom_sf
IPR002885Pentatricopeptide_repeat
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg03921-RACarg03921-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 193..239
e-value: 1.5E-10
score: 40.9
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 90..138
e-value: 9.0E-4
score: 19.2
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 370..393
e-value: 0.0019
score: 16.2
coord: 93..126
e-value: 0.0032
score: 15.5
coord: 296..330
e-value: 2.4E-5
score: 22.2
coord: 268..292
e-value: 8.2E-4
score: 17.4
coord: 195..229
e-value: 2.9E-8
score: 31.4
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 369..393
e-value: 0.0014
score: 18.7
coord: 336..360
e-value: 0.1
score: 12.8
coord: 268..293
e-value: 3.1E-4
score: 20.7
coord: 296..323
e-value: 8.9E-6
score: 25.5
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 366..396
score: 7.892
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 294..329
score: 9.076
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 161..192
score: 6.654
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 432..466
score: 5.755
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 126..160
score: 5.207
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 398..428
score: 5.371
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 263..293
score: 8.331
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 193..227
score: 12.255
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 228..262
score: 6.259
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 90..125
score: 10.326
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 330..365
score: 8.517
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 268..481
e-value: 6.0E-41
score: 142.8
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 142..249
e-value: 1.6E-20
score: 75.2
coord: 10..141
e-value: 2.0E-7
score: 32.5
IPR032867DYW domainPFAMPF14432DYW_deaminasecoord: 468..592
e-value: 2.0E-40
score: 137.5
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 41..513
NoneNo IPR availablePANTHERPTHR24015:SF239SUBFAMILY NOT NAMEDcoord: 41..513

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg03921Cla022318Watermelon (97103) v1carwmB0978
Carg03921Csa2G381680Cucumber (Chinese Long) v2carcuB0987
Carg03921ClCG08G013260Watermelon (Charleston Gray)carwcgB0958
Carg03921CSPI02G23440Wild cucumber (PI 183967)carcpiB1010
Carg03921Cucsa.162390Cucumber (Gy14) v1carcgyB1091
Carg03921CmaCh12G003330Cucurbita maxima (Rimu)carcmaB1349
Carg03921CmoCh12G002820Cucurbita moschata (Rifu)carcmoB1310
Carg03921CmoCh17G008380Cucurbita moschata (Rifu)carcmoB1313
Carg03921Lsi08G011960Bottle gourd (USVL1VR-Ls)carlsiB898
Carg03921Cp4.1LG07g02890Cucurbita pepo (Zucchini)carcpeB1368
Carg03921CsGy2G023200Cucumber (Gy14) v2carcgybB0960
Carg03921CsaV3_2G031990Cucumber (Chinese Long) v3carcucB1015
Carg03921Cla97C08G156650Watermelon (97103) v2carwmbB1034
Carg03921Bhi04G000789Wax gourdcarwgoB1145
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Carg03921Wax gourdcarwgoB1151
Carg03921Silver-seed gourdcarcarB168
Carg03921Silver-seed gourdcarcarB239
Carg03921Silver-seed gourdcarcarB529
Carg03921Silver-seed gourdcarcarB558
Carg03921Silver-seed gourdcarcarB572
Carg03921Cucumber (Gy14) v2carcgybB0961
Carg03921Cucumber (Gy14) v2carcgybB0965
Carg03921Cucumber (Gy14) v1carcgyB1096
Carg03921Cucurbita maxima (Rimu)carcmaB1347
Carg03921Cucurbita maxima (Rimu)carcmaB1350
Carg03921Cucurbita maxima (Rimu)carcmaB1353
Carg03921Cucurbita maxima (Rimu)carcmaB1357
Carg03921Cucurbita maxima (Rimu)carcmaB1359
Carg03921Cucurbita moschata (Rifu)carcmoB1308
Carg03921Cucurbita moschata (Rifu)carcmoB1311
Carg03921Cucurbita moschata (Rifu)carcmoB1315
Carg03921Cucurbita moschata (Rifu)carcmoB1319
Carg03921Cucurbita pepo (Zucchini)carcpeB1352
Carg03921Cucurbita pepo (Zucchini)carcpeB1354
Carg03921Cucurbita pepo (Zucchini)carcpeB1356
Carg03921Cucurbita pepo (Zucchini)carcpeB1363
Carg03921Cucurbita pepo (Zucchini)carcpeB1366
Carg03921Wild cucumber (PI 183967)carcpiB1011
Carg03921Wild cucumber (PI 183967)carcpiB1016
Carg03921Cucumber (Chinese Long) v2carcuB0988
Carg03921Cucumber (Chinese Long) v2carcuB0993
Carg03921Cucumber (Chinese Long) v3carcucB1016
Carg03921Cucumber (Chinese Long) v3carcucB1021
Carg03921Bottle gourd (USVL1VR-Ls)carlsiB895
Carg03921Melon (DHL92) v3.5.1carmeB0955
Carg03921Melon (DHL92) v3.5.1carmeB0957
Carg03921Melon (DHL92) v3.6.1carmedB0961
Carg03921Melon (DHL92) v3.6.1carmedB0963
Carg03921Watermelon (Charleston Gray)carwcgB0957
Carg03921Watermelon (Charleston Gray)carwcgB0951
Carg03921Watermelon (Charleston Gray)carwcgB0955
Carg03921Watermelon (97103) v1carwmB0980
Carg03921Watermelon (97103) v1carwmB0982
Carg03921Watermelon (97103) v2carwmbB1031
Carg03921Watermelon (97103) v2carwmbB1033