Lsi08G011220 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi08G011220
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Peptidyl-tRNA hydrolase II (PTH2) family protein
Location	chr08 : 19868175 .. 19873993 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTGAATCCGCTTAAAGTAATTCCGTTCCTCCACCGGACAACGGCGGAGCGAAGTCGGAGGAGACAGCCGATGTTTTGATTCAGTATGTGGTGCTCCGTCATTTGGTTGAATAAAGACGATCTCCACACTTCCGACTGCTGTAGTCCACACAACATCGATTCCATGCACAAGGTTAGTCAAATGCTTAACTCCATTTCTAAATTTGATTTTTCTGTTGATATGCTGAAATTTGCTTTGTTATTCTTAAGTTTGAATCCTCCTTGCTCGTATGGTACTGAATGTTTTAATTGTTCCACTTAATATTCAAATGGTTGTATCTGTCGACCATACTCGTAGTTCAAACAGAGATCATTACTTTCATATCTCTGCTTGTACATTTTCTGATTTTTACTTTCAAAGAATTTATAACCACCATTTCCAATCGCTGCCTGTGTAACCAGCTCCAAGGTCTATAAAAATCAACTTCATTTCAAGCTTTCATAAGGATTAAACTGCCAATCGGAAATTTTCATGTGCATTAGATTATTATCTTGTGCAACTTAATTCGTTGAAATTACAGGTGCTCTACATTTCACTGATTCTTAGAGTTGTTCTGGATTTTTTGATCCCTGAAGTCGGTACTGGCTTTATTTTACTTTATGTAGGTTACTTTAGAAGTAAAGCAAATTCAATCGTGCATAAATTTTGGATAGAACAACCAGATAATCTGTCGTATCACCATTTTTTGAAAAGCTGAAACTCTGTAAGTGATAGAAAATTGAAGTGCAAAGAATTGATGAGTAATTTCCTTTACAACATTCCACCCCCACCCAAAAAATAAAACAGTGATAGAGCTCTCCTGATTTGTAGAGAGGTGGTTGGACTCATCTATATATATTTGAAATTTGAAAAGCAGTGAAAAGGAACATTATCATAACAGAAATCAATTATAAAAAAAACTATACATATTATAACCAGGATGTGAAAAGAATCGTCTAATTTAAACAAGGAGAGAAAATGAGAGGAGAGAGCAATCTAACAGGAAAATAAGAAAGATGAGATTAGAAAACTGGGCAACCATCAATGATAACTCCTTTAGCAGAAGGGCAAGAGGCCAAGGGGCATCCATCGGTATTGTTTCCCCACCAGTCAATGCTCTTTGATCCCAATGTAAGAAAGATGAGTATTGTCATGAAGGCAGTTCCGGCATCTAGGCCACCTGATAGGATGTAATTGTAGCGCTTCCACCACTCTGTTTTGTATCTGAAAAGGAAACATCCAAACACGAAACCACAAATCAGCCAACTCGTGAAGTTCACAGCGCTAGCTGGTGGCATCATCGACGTGGCACCCAACAGAACCGGCATGTGGATGAAGCGAATCCAAGCATGCTTGGGGAACATCTTGTGTGCAATCCATACAAGCAATGGGGCAATTCCTCCCCCAATAAAGAACCAATTCACAGCCCCATATTCTCCAAGGTCTCCAAAGATTCTACGAGGCCCAACAAGCCCCCATATTACAGAAGCATCGAAGAACACTCGATCCATTGGGCAAGTCCAGGGGCTGTTTTCTGGCAAAAGGTTGGTGTCACATAGATCTTGAATCGACCCCATGAGCCACCAAGCAGTTCCAATATATACAAACACTGCCAGGATTGTCCCTACAACCTGTAATAAAGTTTATTCATTATGAGTAACTTCACTAACTGGTACCATATTTCATATCGTACCGTATACCATTTTAAGCCAATGTAATAGAAAATTCACCTGAGCCATGAACATTGCTCTTGGTGGAATCTTCATGTAGTGACCAAGTTTAAAGTCAGACACGAATGTTAAAGCTTGTGTCATGCTGATATATCCATACACCTTGAAACACATGTTGGCCACCGGGCGTTCGGGATATGCATAACCAATGATGTATTCTGTAATAATGTTCAAACCAGGTGCCTCCAAACAAGAAAGACATTTAGATTTATCATGATGAGTAAACTTTTCATAAAGAAACTCTTGAAGCTGAAGAAATTTGCTGTATGGATTGGGGTACATGACTCACCTGGTTTGTGGTAGCAGCAATGATGCCGATGGGAAGTGTGAAGAAGAAGGCAATAAAACAAGCTAAGAGTACACCCCACCAAGGCAATTGAAGTGAGGCATTGTAATATTGACAAGCAAAAATCGAGAGGCCAATATTCAACACAAGGATGACAATAAACCACCATGTTGGTACTTGTTTATAAGCTCGCATAAGCCTTGTATGTATGTCAATTTTTCTCTTCCCACCAAAGGCACTTTTGCTCTGGTCCCGTAGTTCTCTGCATGTAATATAGAACATCAATCAATTAGACAAGGTTTCACAGTTTTCTACATTTACAAATTTGAAGTTTTGTCGAGAAGTTACCTTCCATGAAAGAGAAAAACATGAACAACTGTAGCAGAAAGTGTGGCAAATCCAAGACCGTAGGTCATCGCAAAGAAGGTACTGAGATTTACAGGCCCAGTTGTGCTGTAAACACCTCGATCAAGATGAAAATTAGAGTTGACTATGCTTGAAATATTGTACTTCAGACCATTCGCCATGAAAAGTTTGCTTGAATATATGGGAAACTTCTTGGCCCCATAGACATTAAACCAATAACTGAGAGGTGTCATGACATACATCACAAGAACAAACCCCACAGCAATGTTGGCAGTGGCAAACCAAGGACTAGCTAAGGGACTTCCAAGGTAAGATGAAATTGTCGACCAATCTATGCCGAATGCACCAAGTCCAAGGCCTTTCATGCCAGATCCCATTTGATGAAGCAAAAGAGACTTTGAATTAAACCAACAAAGCCAAGAGAAAGAGGTAAGCATCATGAAAAGATAACCAGGAACAATATAGTAAGCAAAGCTACAAGTCATAGCCAAGATGAAGAATTGTGTAAGAGTGGTGCTTTGTTTTGGTCTCTTTTCCTTCTCATGTAGAGCCCTACAATTCTCAAAAGCTCACTAATTAGAAAACTTACCCAAATACAAAGAATAAGAGCTTCATTCAATTAAAACAAAATTAGTCATATGGAGCATTAGATAATAAGACATCACCTAAATAATGAGACTTGAACCAAATTAGCTGGCCACCACATCTCCCCTGGCTCAACCAAATATTTCCTAAAAATTCCAGCCCAACCGAATCCAAGAATCTACAAAAATAAGGATCATATAAAGTTATGAGTGTCATAGTACAAATAGATAACAACCATTTCAACATTTTTCACAATGAAAAAATGTTCGTACCATTTTGACATTGAATGCTAAGAGAAAATAGAAGACAATATCTTTCATAGTTGTAAAAATGAAACAAATCTATAAAACCAAAGACGTGAAATGCCAATTCAATTTAAATATGGAATCTTATAATGCAATAGCAAGTTCATAAACAAACATTGACGAGACACCCTATTGAAACTGAAAATTCATTTGAAAAGTGGATGAAGATATGAACCTGAGTAGTGAGCATAATAAGCAAAGCAGGAATGAAAGTGAGTTGTCTCTTGTAGAGTAGCTTAACAGCAGTCAAAATATGAGTAGCATAAACAGAGCCAGCACCAGAATTGGCAAAAATGGTAATCAAAACATGCTCCTTTATATTGAAGGGTCCAGGATTCATAGTGAACTCAAACCGCGTGCCTTTGAAAAAGGGTCGAGTCGGAAGTGTTTTGGCCATCAAATGGCCAAGAGGCACAACCGCAATTTGTGCAGCAATCGAAGATACTGACAATGGGTTGGATCTATACCAGAAGAATTGGTTCACAAAGGAGAGTATGACACAAGCCGCAACCCCCAAAACCCACATTCTGAATGTGAGAACTGGCAAGTTGGGGTCATCGGTTTTCGGAACTGTAATATCAACTTGCTTGATCGGGCACTCATCGTGGGTAGTCACCGTCATAGGGTGCTCACTCTGAATCTCGGATACGCTAGTCGACATGGTAATTAGTTAGAAAGTTTCGTTGTGTTGTAGAGTGCAAGGTGAGACTCTCTACCACAACTTCTTCATGGAGATCGCAAGACAATCTGTAGAGTAAAAAGAAACTAAATAAAAGTGGGATTTTGAGTGAAATATAAAATCGATTCCTAAAGAAGTCATGATTCTGTTTCAATACATCCAATCAATGTTCAAAATTAAGTCATAATTCATAAGTGAGAGCATAGTATTCCATTTTCGTTGACATGTCGATATTTCGACCTGAATGATGAATTGATATTTCTATTATATCGTAAAAAAAATTCACAAAACATAAAAAATAAGCAAGAAAATGTAAGTATTGTAAATATAATATAAATAATATATATGTAAGCTTGTTTAAAAATCATAAAATGTTTATTTACTAATTTAGGTTTATTTTTTGAATTTTTCGTTTTTATAATTTTTCCGATTTCATCAAAATTTTCCTAAAATTAAGATCTTAATATTTTCGTGACATCGACGTTTTAAACCTTGGGTGAGAGTTTACTTTTTAAGAAAAAAAAACTTTCCATGACTACTAATATTATTTTTAAGAAAAAGACGTTTCTCAAAATAATAATAATATCATTATTATTAAGACAGCCATGCAAAATATTGGAAATGGTACAAATATTTGACAAAGATCGTTTTAACCAGGAAATTCTACATTTTATAAAAGTTACCTAATTTATAAAAATATTTCATTTTTACATTTTGAGTGTATGAAAATCTATTTTTTAACCCTGAGTTAAATATATATATATTATCTCTCCTCTCTCATGCCAGTAAAGCATTGACAGAATGGGGTTGGTGGTACTTTAAATACACCTAAATTACTCAATAATTTGGCTTATTTGAATGATCAAAATTTTGGAAGCAACAATATTTTGTCTTAATTGAATGGTCAATTTTGAAAGCAACAATAACATTATGAAATTATATGGCAGATTCTCATTCCAAGTCCAATTTAACTTTAGGAAAAAAAAAAACTTTTATTTATTTATTTTTACAACAAAACTGTTTTTATATCCAAACATGCCTTTAGTCTTAGACTTGCCAAAATCATAATTGGTAGTTAGAAAATTTTATAGTTTAAAAACCTATTTGACACAAATTAGACTCAATTTATAATTTAAGTTATCTAAAATAATAAATATACATGCCTAGATTTATATAATAACTATCGAGTGGTTATCATATAAAAAAAAAATCCAAAACTTACCTTATCAATTGTTGGATGAAGATCGGCTTCGGGAACTAAGAATTCCTGAAATTAAAAAAAATAATGATCAATTAAGAGAATGGACATTCAATTTTTGAGAAAGGAAAAAAGAAAAAACAAATCAATGAATGGAAAAAAATGAAGGAAATGTGCGGAAATAAAAAAAGAAAAAAATTAAAAAGTCGGAAAAAGGGACAAAAAAAGATTGAAAAAATACAATAGAAAATAAGATTTTTTTCTGTTTTTTAAAAGGAAAAGCCTAAAATAGTCTTTTGGCTCATCTCTTTCTTTCCCTCTCCGCTGTGGTTTTTAGAGAGACCACTGACTCTGCTTACTCATCGTCGCCGGCGACGATAGGAACTGGTCAACCACCATACGACGGCGGTCAAACCGACCATCGGGCGGCGTTTTCGGCGGTGCGCAGGCGAAGTGAAGAGGAAAAAGAAAAGAAGAGAAAATAAAAGAAGGAAATGAAGATTAAAAAAGAAAAAAGTTTCAAAAAAATATTAAAAAGAAGAAGAAAAAAAGAAAGAGATACAAACCTCAGTCTGGAGCCTGAAAATAAAGTGTGAGAACTCTGTTGAAAGGTTAACACCTTTTATATTGAGAATGCTAATCCTTTTT

mRNA sequence

ATGATAATTCCGTTCCTCCACCGGACAACGGCGGAGCGAAGTCGGAGGAGACAGCCGATTATGTGGTGCTCCGTCATTTGGTTGAATAAAGACGATCTCCACACTTCCGACTGCTGTAGTCCACACAACATCGATTCCATGCACAAGGTGCTCTACATTTCACTGATTCTTAGAGTTGTTCTGGATTTTTTGATCCCTGAAGTCGGTTACTTTAGAAGTAAAGCAAATTCAATCGTGCATAAATTTTGGATAGAACAACCAGATAATCTGTCGTATCACCATTTTTTGAAAAGCTGAAACTCTGAACTGGTCAACCACCATACGACGGCGGTCAAACCGACCATCGGGCGGCGTTTTCGGCGGTGCGCAGGCGAAGTGAAGAGGAAAAAGAAAAGAAGAGAAAATAAAAGAAGGAAATGAAGATTAAAAAAGAAAAAAGTTTCAAAAAAATATTAAAAAGAAGAAGAAAAAAAGAAAGAGATACAAACCTCAGTCTGGAGCCTGAAAATAAAGTGTGAGAACTCTGTTGAAAGGTTAACACCTTTTATATTGAGAATGCTAATCCTTTTT

Coding sequence (CDS)

ATGATAATTCCGTTCCTCCACCGGACAACGGCGGAGCGAAGTCGGAGGAGACAGCCGATTATGTGGTGCTCCGTCATTTGGTTGAATAAAGACGATCTCCACACTTCCGACTGCTGTAGTCCACACAACATCGATTCCATGCACAAGGTGCTCTACATTTCACTGATTCTTAGAGTTGTTCTGGATTTTTTGATCCCTGAAGTCGGTTACTTTAGAAGTAAAGCAAATTCAATCGTGCATAAATTTTGGATAGAACAACCAGATAATCTGTCGTATCACCATTTTTTGAAAAGCTGA

Protein sequence

MIIPFLHRTTAERSRRRQPIMWCSVIWLNKDDLHTSDCCSPHNIDSMHKVLYISLILRVVLDFLIPEVGYFRSKANSIVHKFWIEQPDNLSYHHFLKS

Homology

[Close]

BLAST of Lsi08G011220 vs. TrEMBL
Match: A0A0A0LLQ2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G377990 PE=4 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 1.8e-11
Identity = 39/67 (58.21%), Postives = 46/67 (68.66%), Query Frame = 1


Query: 24  SVIWLNKDDLHTSDCCSPHNIDSMHKVLYISLILRVVLDFLIPEVGYFRSKANSIVHKFW 83
           S IWLNKDD HTSD C+PHNIDSMHKV      L V  +  +  +   + KANSIVHK W
Sbjct: 107 SAIWLNKDDPHTSDYCNPHNIDSMHKV-----TLEVKGETQMVNLSE-KLKANSIVHKLW 166

Query: 84  IEQPDNL 91
           IEQP+N+
Sbjct: 167 IEQPENI 167

[Close]

BLAST of Lsi08G011220 vs. TrEMBL
Match: B9S6X8_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1329380 PE=4 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 7.9e-07
Identity = 34/68 (50.00%), Postives = 42/68 (61.76%), Query Frame = 1


Query: 24  SVIWLNKDDLHTSDCCSPHNIDSMHKVLYISLILRVVLDFL-IPEVGYFRSKANSIVHKF 83
           S IW NKDD HT   CSP NIDSMHKV   +L ++  +  L + E    +  A  IVHK 
Sbjct: 50  SAIWGNKDDPHTLQYCSPENIDSMHKV---TLEVKGEVQMLNLAE----KLTAGGIVHKL 109

Query: 84  WIEQPDNL 91
           WIEQP+N+
Sbjct: 110 WIEQPENI 110

[Close]

BLAST of Lsi08G011220 vs. TrEMBL
Match: I1K946_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_06G077100 PE=4 SV=2)

HSP 1 Score: 60.1 bits (144), Expect = 1.8e-06
Identity = 32/69 (46.38%), Postives = 39/69 (56.52%), Query Frame = 1


Query: 24  SVIWLNKDDLHTSDCCSPHNIDSMHKVLYISLILRVVLDFLIPEVGYFRSK--ANSIVHK 83
           S +W NKDD  T D CSP  IDSMHKV      L V  +   P++     K  A  I+HK
Sbjct: 92  SAVWFNKDDPFTVDYCSPDKIDSMHKV-----TLEVKGE---PQIKNLSEKLTAGGIIHK 151

Query: 84  FWIEQPDNL 91
            WIEQP+N+
Sbjct: 152 LWIEQPENI 152

[Close]

BLAST of Lsi08G011220 vs. TrEMBL
Match: A0A0B2Q4G3_GLYSO (Putative peptidyl-tRNA hydrolase PTRHD1 OS=Glycine soja GN=glysoja_036558 PE=4 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 1.8e-06
Identity = 32/69 (46.38%), Postives = 39/69 (56.52%), Query Frame = 1


Query: 24  SVIWLNKDDLHTSDCCSPHNIDSMHKVLYISLILRVVLDFLIPEVGYFRSK--ANSIVHK 83
           S +W NKDD  T D CSP  IDSMHKV      L V  +   P++     K  A  I+HK
Sbjct: 92  SAVWFNKDDPFTVDYCSPDKIDSMHKV-----TLEVKGE---PQIKNLSEKLTAGGIIHK 151

Query: 84  FWIEQPDNL 91
            WIEQP+N+
Sbjct: 152 LWIEQPENI 152

[Close]

BLAST of Lsi08G011220 vs. TrEMBL
Match: A0A067KNR2_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07025 PE=4 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 3.0e-06
Identity = 31/65 (47.69%), Postives = 39/65 (60.00%), Query Frame = 1


Query: 26  IWLNKDDLHTSDCCSPHNIDSMHKVLYISLILRVVLDFLIPEVGYFRSKANSIVHKFWIE 85
           IW NKDD HT + CSP +IDSMHKV      L V  +  +  +   + KA  I HK WIE
Sbjct: 102 IWANKDDPHTLEYCSPQHIDSMHKV-----TLEVKGEAQMLNLSE-KLKAGGIAHKLWIE 160

Query: 86  QPDNL 91
           QP+N+
Sbjct: 162 QPENI 160

[Close]

BLAST of Lsi08G011220 vs. NCBI nr
Match: gi|778672199|ref|XP_011649759.1| (PREDICTED: putative peptidyl-tRNA hydrolase PTRHD1 isoform X2 [Cucumis sativus])

HSP 1 Score: 76.6 bits (187), Expect = 2.6e-11
Identity = 39/67 (58.21%), Postives = 46/67 (68.66%), Query Frame = 1


Query: 24  SVIWLNKDDLHTSDCCSPHNIDSMHKVLYISLILRVVLDFLIPEVGYFRSKANSIVHKFW 83
           S IWLNKDD HTSD C+PHNIDSMHKV      L V  +  +  +   + KANSIVHK W
Sbjct: 107 SAIWLNKDDPHTSDYCNPHNIDSMHKV-----TLEVKGETQMVNLSE-KLKANSIVHKLW 166

Query: 84  IEQPDNL 91
           IEQP+N+
Sbjct: 167 IEQPENI 167

[Close]

BLAST of Lsi08G011220 vs. NCBI nr
Match: gi|449441996|ref|XP_004138768.1| (PREDICTED: putative peptidyl-tRNA hydrolase PTRHD1 isoform X1 [Cucumis sativus])

HSP 1 Score: 76.6 bits (187), Expect = 2.6e-11
Identity = 39/67 (58.21%), Postives = 46/67 (68.66%), Query Frame = 1


Query: 24  SVIWLNKDDLHTSDCCSPHNIDSMHKVLYISLILRVVLDFLIPEVGYFRSKANSIVHKFW 83
           S IWLNKDD HTSD C+PHNIDSMHKV      L V  +  +  +   + KANSIVHK W
Sbjct: 107 SAIWLNKDDPHTSDYCNPHNIDSMHKV-----TLEVKGETQMVNLSE-KLKANSIVHKLW 166

Query: 84  IEQPDNL 91
           IEQP+N+
Sbjct: 167 IEQPENI 167

[Close]

BLAST of Lsi08G011220 vs. NCBI nr
Match: gi|659088630|ref|XP_008445082.1| (PREDICTED: putative peptidyl-tRNA hydrolase PTRHD1 [Cucumis melo])

HSP 1 Score: 70.9 bits (172), Expect = 1.4e-09
Identity = 37/67 (55.22%), Postives = 44/67 (65.67%), Query Frame = 1


Query: 24  SVIWLNKDDLHTSDCCSPHNIDSMHKVLYISLILRVVLDFLIPEVGYFRSKANSIVHKFW 83
           S IWL KDD HTSD C+P NIDSMHKV      L V  +  +  +   + KANSIVHK W
Sbjct: 107 SAIWLTKDDPHTSDYCNPDNIDSMHKV-----TLEVKGETQMVNLSE-KLKANSIVHKLW 166

Query: 84  IEQPDNL 91
           IEQP+N+
Sbjct: 167 IEQPENI 167

[Close]

BLAST of Lsi08G011220 vs. NCBI nr
Match: gi|1000959525|ref|XP_015576408.1| (PREDICTED: putative peptidyl-tRNA hydrolase PTRHD1 isoform X1 [Ricinus communis])

HSP 1 Score: 61.2 bits (147), Expect = 1.1e-06
Identity = 34/68 (50.00%), Postives = 42/68 (61.76%), Query Frame = 1


Query: 24  SVIWLNKDDLHTSDCCSPHNIDSMHKVLYISLILRVVLDFL-IPEVGYFRSKANSIVHKF 83
           S IW NKDD HT   CSP NIDSMHKV   +L ++  +  L + E    +  A  IVHK 
Sbjct: 89  SAIWGNKDDPHTLQYCSPENIDSMHKV---TLEVKGEVQMLNLAE----KLTAGGIVHKL 148

Query: 84  WIEQPDNL 91
           WIEQP+N+
Sbjct: 149 WIEQPENI 149

[Close]

BLAST of Lsi08G011220 vs. NCBI nr
Match: gi|1000959531|ref|XP_015576410.1| (PREDICTED: putative peptidyl-tRNA hydrolase PTRHD1 isoform X3 [Ricinus communis])

HSP 1 Score: 61.2 bits (147), Expect = 1.1e-06
Identity = 34/68 (50.00%), Postives = 42/68 (61.76%), Query Frame = 1


Query: 24  SVIWLNKDDLHTSDCCSPHNIDSMHKVLYISLILRVVLDFL-IPEVGYFRSKANSIVHKF 83
           S IW NKDD HT   CSP NIDSMHKV   +L ++  +  L + E    +  A  IVHK 
Sbjct: 50  SAIWGNKDDPHTLQYCSPENIDSMHKV---TLEVKGEVQMLNLAE----KLTAGGIVHKL 109

Query: 84  WIEQPDNL 91
           WIEQP+N+
Sbjct: 110 WIEQPENI 110

The following BLAST results are available for this feature:

BLAST of Lsi08G011220 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Lsi08G011220 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LLQ2_CUCSA	1.8e-11	58.21	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G377990 PE=4 SV=1	[more]
B9S6X8_RICCO	7.9e-07	50.00	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1329380 PE=4 SV=1	[more]
I1K946_SOYBN	1.8e-06	46.38	Uncharacterized protein OS=Glycine max GN=GLYMA_06G077100 PE=4 SV=2	[more]
A0A0B2Q4G3_GLYSO	1.8e-06	46.38	Putative peptidyl-tRNA hydrolase PTRHD1 OS=Glycine soja GN=glysoja_036558 PE=4 S...	[more]
A0A067KNR2_JATCU	3.0e-06	47.69	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07025 PE=4 SV=1	[more]

BLAST of Lsi08G011220 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of Lsi08G011220 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778672199\|ref\|XP_011649759.1\|	2.6e-11	58.21	PREDICTED: putative peptidyl-tRNA hydrolase PTRHD1 isoform X2 [Cucumis sativus]	[more]
gi\|449441996\|ref\|XP_004138768.1\|	2.6e-11	58.21	PREDICTED: putative peptidyl-tRNA hydrolase PTRHD1 isoform X1 [Cucumis sativus]	[more]
gi\|659088630\|ref\|XP_008445082.1\|	1.4e-09	55.22	PREDICTED: putative peptidyl-tRNA hydrolase PTRHD1 [Cucumis melo]	[more]
gi\|1000959525\|ref\|XP_015576408.1\|	1.1e-06	50.00	PREDICTED: putative peptidyl-tRNA hydrolase PTRHD1 isoform X1 [Ricinus communis]	[more]
gi\|1000959531\|ref\|XP_015576410.1\|	1.1e-06	50.00	PREDICTED: putative peptidyl-tRNA hydrolase PTRHD1 isoform X3 [Ricinus communis]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0008152	metabolic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0004045	aminoacyl-tRNA hydrolase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi08G011220.1	Lsi08G011220.1	mRNA

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi08G011220	CmaCh12G002960	Cucurbita maxima (Rimu)	cmalsiB191
Lsi08G011220	CmaCh05G006250	Cucurbita maxima (Rimu)	cmalsiB737
Lsi08G011220	CmoCh12G002470	Cucurbita moschata (Rifu)	cmolsiB175
Lsi08G011220	CmoCh05G006520	Cucurbita moschata (Rifu)	cmolsiB728
Lsi08G011220	Cp4.1LG07g01980	Cucurbita pepo (Zucchini)	cpelsiB685
Lsi08G011220	CsGy2G022460	Cucumber (Gy14) v2	cgyblsiB126
Lsi08G011220	Carg08309	Silver-seed gourd	carlsiB056
Lsi08G011220	Carg03886	Silver-seed gourd	carlsiB899

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi08G011220	Bottle gourd (USVL1VR-Ls)	lsilsiB153
Lsi08G011220	Cucumber (Gy14) v1	cgylsiB267
Lsi08G011220	Cucumber (Gy14) v1	cgylsiB513
Lsi08G011220	Cucurbita maxima (Rimu)	cmalsiB040
Lsi08G011220	Cucurbita maxima (Rimu)	cmalsiB184
Lsi08G011220	Cucurbita maxima (Rimu)	cmalsiB457
Lsi08G011220	Cucurbita moschata (Rifu)	cmolsiB028
Lsi08G011220	Cucurbita moschata (Rifu)	cmolsiB181
Lsi08G011220	Cucurbita moschata (Rifu)	cmolsiB443
Lsi08G011220	Cucurbita pepo (Zucchini)	cpelsiB098
Lsi08G011220	Cucurbita pepo (Zucchini)	cpelsiB478
Lsi08G011220	Cucurbita pepo (Zucchini)	cpelsiB652
Lsi08G011220	Cucurbita pepo (Zucchini)	cpelsiB693
Lsi08G011220	Wild cucumber (PI 183967)	cpilsiB139
Lsi08G011220	Wild cucumber (PI 183967)	cpilsiB240
Lsi08G011220	Cucumber (Chinese Long) v2	culsiB140
Lsi08G011220	Cucumber (Chinese Long) v2	culsiB241
Lsi08G011220	Melon (DHL92) v3.5.1	lsimeB479
Lsi08G011220	Melon (DHL92) v3.5.1	lsimeB474
Lsi08G011220	Watermelon (Charleston Gray)	lsiwcgB438
Lsi08G011220	Watermelon (97103) v1	lsiwmB465
Lsi08G011220	Cucumber (Gy14) v2	cgyblsiB227
Lsi08G011220	Melon (DHL92) v3.6.1	lsimedB493
Lsi08G011220	Melon (DHL92) v3.6.1	lsimedB500
Lsi08G011220	Silver-seed gourd	carlsiB502
Lsi08G011220	Silver-seed gourd	carlsiB581
Lsi08G011220	Silver-seed gourd	carlsiB898
Lsi08G011220	Cucumber (Chinese Long) v3	cuclsiB152
Lsi08G011220	Cucumber (Chinese Long) v3	cuclsiB261
Lsi08G011220	Watermelon (97103) v2	lsiwmbB444
Lsi08G011220	Wax gourd	lsiwgoB603
Lsi08G011220	Wax gourd	lsiwgoB628