Lsi08G008500 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGACAAGAAAGGTGGAAGAAGAATCAGTACTTTCAATAGAAACTGATCAAACTGTAAATGAAAAGGATAAAGAAGATGAGAAGAAGAAGAAGAAGAAGAATGAAGATGAAGGGGATAGGGATTTTCTAATGGTAGCAACAACATTCATTGCAGCCATGGCTTTCCAAGCCGGGACGAACCCTCCCGGTGGCGTATGGCAAGACGACAACAACAAACCCGACTACGAAGCAGGCAAATCCATAATGGCTACAAAATCTCCTTCTCAATTCATCAGTTTCATGAGCGGCGTTACGCTATGCTTTGCGTGCTCAGTAATGCAGTTTATGGTGTTGTTGGTTAAGTCATCTGCTAAAACGTGGTCGGTTTCTAAGAGTTTTCTTTACTTCACAATGGGCTCTGCAATATCATCCATGATTGTTGCTTATTGGTCCGCCATAAAAGCTTTGACGCCTGACGCTCAAATGTCTAGTGTCATTGTTATGCTCAAAACTACCCTTGTTCTTAGCATTGTTTTGCTGCCAATTTCAATGTATATAGAGAAGAGACGACTTGCATCTCGTTAG ATGACAAGAAAGGTGGAAGAAGAATCAGTACTTTCAATAGAAACTGATCAAACTGTAAATGAAAAGGATAAAGAAGATGAGAAGAAGAAGAAGAAGAAGAATGAAGATGAAGGGGATAGGGATTTTCTAATGGTAGCAACAACATTCATTGCAGCCATGGCTTTCCAAGCCGGGACGAACCCTCCCGGTGGCGTATGGCAAGACGACAACAACAAACCCGACTACGAAGCAGGCAAATCCATAATGGCTACAAAATCTCCTTCTCAATTCATCAGTTTCATGAGCGGCGTTACGCTATGCTTTGCGTGCTCAGTAATGCAGTTTATGGTGTTGTTGGTTAAGTCATCTGCTAAAACGTGGTCGGTTTCTAAGAGTTTTCTTTACTTCACAATGGGCTCTGCAATATCATCCATGATTGTTGCTTATTGGTCCGCCATAAAAGCTTTGACGCCTGACGCTCAAATGTCTAGTGTCATTGTTATGCTCAAAACTACCCTTGTTCTTAGCATTGTTTTGCTGCCAATTTCAATGTATATAGAGAAGAGACGACTTGCATCTCGTTAG ATGACAAGAAAGGTGGAAGAAGAATCAGTACTTTCAATAGAAACTGATCAAACTGTAAATGAAAAGGATAAAGAAGATGAGAAGAAGAAGAAGAAGAAGAATGAAGATGAAGGGGATAGGGATTTTCTAATGGTAGCAACAACATTCATTGCAGCCATGGCTTTCCAAGCCGGGACGAACCCTCCCGGTGGCGTATGGCAAGACGACAACAACAAACCCGACTACGAAGCAGGCAAATCCATAATGGCTACAAAATCTCCTTCTCAATTCATCAGTTTCATGAGCGGCGTTACGCTATGCTTTGCGTGCTCAGTAATGCAGTTTATGGTGTTGTTGGTTAAGTCATCTGCTAAAACGTGGTCGGTTTCTAAGAGTTTTCTTTACTTCACAATGGGCTCTGCAATATCATCCATGATTGTTGCTTATTGGTCCGCCATAAAAGCTTTGACGCCTGACGCTCAAATGTCTAGTGTCATTGTTATGCTCAAAACTACCCTTGTTCTTAGCATTGTTTTGCTGCCAATTTCAATGTATATAGAGAAGAGACGACTTGCATCTCGTTAG MTRKVEEESVLSIETDQTVNEKDKEDEKKKKKKNEDEGDRDFLMVATTFIAAMAFQAGTNPPGGVWQDDNNKPDYEAGKSIMATKSPSQFISFMSGVTLCFACSVMQFMVLLVKSSAKTWSVSKSFLYFTMGSAISSMIVAYWSAIKALTPDAQMSSVIVMLKTTLVLSIVLLPISMYIEKRRLASR
BLAST of Lsi08G008500 vs. TrEMBL
Match: A0A0A0KGU1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G363530 PE=4 SV=1) HSP 1 Score: 133.3 bits (334), Expect = 3.1e-28 Identity = 83/170 (48.82%), Postives = 107/170 (62.94%), Query Frame = 1
BLAST of Lsi08G008500 vs. TrEMBL
Match: A0A0A0KIL3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G363520 PE=4 SV=1) HSP 1 Score: 125.9 bits (315), Expect = 5.0e-26 Identity = 80/173 (46.24%), Postives = 117/173 (67.63%), Query Frame = 1
BLAST of Lsi08G008500 vs. TrEMBL
Match: A0A0A0KFJ5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G363010 PE=4 SV=1) HSP 1 Score: 108.6 bits (270), Expect = 8.3e-21 Identity = 74/187 (39.57%), Postives = 112/187 (59.89%), Query Frame = 1
BLAST of Lsi08G008500 vs. TrEMBL
Match: A0A0A0KDK4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G363540 PE=4 SV=1) HSP 1 Score: 92.4 bits (228), Expect = 6.1e-16 Identity = 50/68 (73.53%), Postives = 58/68 (85.29%), Query Frame = 1
BLAST of Lsi08G008500 vs. TrEMBL
Match: B9HDA6_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0006s24010g PE=4 SV=1) HSP 1 Score: 71.2 bits (173), Expect = 1.5e-09 Identity = 47/123 (38.21%), Postives = 66/123 (53.66%), Query Frame = 1
BLAST of Lsi08G008500 vs. NCBI nr
Match: gi|659089597|ref|XP_008445596.1| (PREDICTED: uncharacterized protein LOC103488576 [Cucumis melo]) HSP 1 Score: 134.8 bits (338), Expect = 1.5e-28 Identity = 86/178 (48.31%), Postives = 112/178 (62.92%), Query Frame = 1
BLAST of Lsi08G008500 vs. NCBI nr
Match: gi|778715279|ref|XP_011657373.1| (PREDICTED: uncharacterized protein LOC105435852 [Cucumis sativus]) HSP 1 Score: 133.3 bits (334), Expect = 4.5e-28 Identity = 83/170 (48.82%), Postives = 107/170 (62.94%), Query Frame = 1
BLAST of Lsi08G008500 vs. NCBI nr
Match: gi|449452915|ref|XP_004144204.1| (PREDICTED: uncharacterized protein LOC101208403 [Cucumis sativus]) HSP 1 Score: 125.9 bits (315), Expect = 7.2e-26 Identity = 80/173 (46.24%), Postives = 117/173 (67.63%), Query Frame = 1
BLAST of Lsi08G008500 vs. NCBI nr
Match: gi|659089463|ref|XP_008445521.1| (PREDICTED: uncharacterized protein LOC103488512 [Cucumis melo]) HSP 1 Score: 122.1 bits (305), Expect = 1.0e-24 Identity = 80/184 (43.48%), Postives = 122/184 (66.30%), Query Frame = 1
BLAST of Lsi08G008500 vs. NCBI nr
Match: gi|449452917|ref|XP_004144205.1| (PREDICTED: uncharacterized protein LOC101208645 [Cucumis sativus]) HSP 1 Score: 108.6 bits (270), Expect = 1.2e-20 Identity = 74/187 (39.57%), Postives = 112/187 (59.89%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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