Lsi08G006750 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi08G006750
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	F-box and Leucine Rich Repeat domains containing protein, putative isoform 2
Location	chr08 : 15115505 .. 15118243 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGGAAACAGAATTCTCAGAGACTTACGGCGGAGTTGGATAAGCTTCGAAGCGAACTTCAAGCCGAGACGAAGCACCGGACGAGTCTTCAGATGGAGGTTTTGGAGGTACATATTCAATGCAATGGATTGAAAGAGGAGTTTGATAAACTGAAGTTGCAAATGGAGGAGCTAAGGGAAAAACAAGAGGCCAAAGGAAGCATTCTTTTTCAAATGAAGGATAGAGATAACATAGAAAAGGAATGGGAAAGAGAAATGAAGGTTCAGAAAGATTTGAGTGATAATTTGGCTTTGGAGCTTAAGAGAAGTCAAGAGGCAAATCTTGAACTTGTTTCAAAGCAACAGATGGAGATTGAAGATATGGATACATATAGCATCAGCAGTGAAGATAACAAGAGAACAAGCTCAGAGGAACAAGATTTTCCTGAGGAAATAAGAAAGGAAATTCACGGTTCGTGTGTCGAAGAAACCGTTGTTTTATTACATGAACCGTCTGAGGAAAATGGAAGTAAAGCCTTGAAGCTTCACTTACATCAGTTGCAAGAATTTCAAAAGAATCAAGAGATTATTCCACTTGAAATGAAAACATTTAGAGGTGAAAATAGTGAAAATTGCAGCCCATTTAGAGAAATAGAAATTCTGAGAAAGAAATTGCAGGTGCTTGAGCAAGGCCACAAAGAGCTCAAAGAAGAAAATATGGATCTTCAATTCAAGCTTGAAGAATCAAGGAGGTATATTCAGACGTGTCGTAACTCGGCTTCTTCCTTTCTAATGCCTGATTTAAATACTGTCATAAAGATCTTTGAACTGTTCTCTGAATTGTATGAATGTTGTCGGATTTCCGCAAAAAACGAGAGGAAGCAAATGGATTCCTCTTCATTGATGTCATCTTTAGATTACAAAAGCAACTTTATGGAAGCTTATGGAAATGAAGGTTTTCATGTTGGAGAACAAGTTGAGGTTATCTTCAACAAATTTATCAAACTCAAGGATTTGTTTGAAGCAAGTTTTACACTTCATGAAGAAGGTTGTGGTTTATATGAAGGAGTTAAGAGTTTGCACATGGAATCCGGATTCGACGATACCGGTTCGGGGAAGAATCCCATTATTGGTAGTCTAAGGCATGAAAATATGCTGAAGGACAAGGAGATTGAAGGCTTGAAGCATTGTAAAAAGGAGTTGGAAGCTCAGGTTGCAAGGATTGAGGAAGAGAAGAGTCGGACGGAGGCCGATGTGACCGGTTCACTCGGAAAAAGCAGTGTGGATCTTAAGGATTTAGCCAATGATACTATTTGCAAGACATCATTGAAGTTCAAATGTGGAAATGATGAATTAGAAGTGCACTTATTAGAACTAGAGAATGAAAATATTTGCTTATCAGAAAGAATAAGTGGCTTGGAGGCTGTTCTAAGGCACCTGACCGACGAAAAGGAGTCGATTTCTTTGCTGTTACAAGATTCAGAATCTAATGTTGGGAAACTACAAAACAAAGTATGTGAATTGGCGAATGAAATAATGACACAAAAGCTTGATTTCAAACAGAAGTTACAAGACAGAAAGCAACAATTCTTTGAAGCCTTAGAAGAGATTCAGAGTTTGAAAACAGAAAACAAGAAGCTTCAAGCTATGGTTGAGAGTATAATGGAGGAACATTCTTTATTGAAGATATCAAATAATGAGCTAAGGAAGCAAAAGATGGATTTACAAGAGCATTGTGCAATCTTAGAAGTCGAAGTGAGGGACACGCTCGAACTGTTTTCCGGAATCTTAAACGAAGTTGAAAATTTAGAAGCGAGTTTTCGTAGAATGCTGAAAGAAGTTAGTTCGAAAGAGAAATCCACGAACAAAGAGCTCGATGCATTGGTTCGAGAAATCCATAAACATAACGCAAACGTTGCTCGAGACGATAGCCTGTTAAATCAGATGTACTTGGAGAAAACGGCTGAAGTCGATAATCTCGAACGAAAAGTTATGCACCTCATGAAACAAATGTCTACAACTTTTGATGAAACTGAGGGAGAAGTTGTACTTGAATTAAGTTGTTTAAGAGCAGATAAGGCAATGTTAGAAGCTGCTTTACAAGAAGCTCAAGGAAAACTTAAGCTATATGAGAGCAAGATTGATCACATTCATAAGGAAGCAGAAAGAAAAGTGATGGGAGTTATAAGTGAGCTAGAAGTTTCAAAGCAAAACCAAGAGATTCTTATGGATTATCACAGAAAAGTGTTGAGTTCCTTAGAAAACGTGAAAAATAGTGAATCAAAATCGAAGAATATGCTAAGGAGGCATGAATTCAAGTTGAAATCATCTGAAAGTGACAGACAAAATCTAGCTGAAGAAGTTTCAACTCTCAAGATAAGATTGCAAGATGAAGTTTTGGCAGTCAAGAAATCACTCATTGAATCAGAACATCAAAATAAGTGTCTCAAAGTTTCCTTTGAGATGTTATCTGAAGATTATGAGAAACTGAAGGGCAAAAATGTGATGTATTTGGAGGAAATATCTGATATGCAAAAAGTATTAACTGAATTAGGGGAATACAAAAGAAGTAAAACTGCCCTTGAGGAAAAAGTTTGGAGGCTTGAATGGGAGCTGACAGCAAAAGAAGCATCTTGTACTTTGCAATCTAAGATGAAAAATGAACTTGCAAGGTTAAGAAGAACAAATAGCCAGTTAAAAGGGAAAATAAAGTACCTAGAGGAGGAGAAAGAAGAACAAAGAAGAAATGCAGAGCCATGA

mRNA sequence

ATGTGGAAACAGAATTCTCAGAGACTTACGGCGGAGTTGGATAAGCTTCGAAGCGAACTTCAAGCCGAGACGAAGCACCGGACGAGTCTTCAGATGGAGGTTTTGGAGGTACATATTCAATGCAATGGATTGAAAGAGGAGTTTGATAAACTGAAGTTGCAAATGGAGGAGCTAAGGGAAAAACAAGAGGCCAAAGGAAGCATTCTTTTTCAAATGAAGGATAGAGATAACATAGAAAAGGAATGGGAAAGAGAAATGAAGGTTCAGAAAGATTTGAGTGATAATTTGGCTTTGGAGCTTAAGAGAAGTCAAGAGGCAAATCTTGAACTTGTTTCAAAGCAACAGATGGAGATTGAAGATATGGATACATATAGCATCAGCAGTGAAGATAACAAGAGAACAAGCTCAGAGGAACAAGATTTTCCTGAGGAAATAAGAAAGGAAATTCACGGTTCGTGTGTCGAAGAAACCGTTGTTTTATTACATGAACCGTCTGAGGAAAATGGAAGTAAAGCCTTGAAGCTTCACTTACATCAGTTGCAAGAATTTCAAAAGAATCAAGAGATTATTCCACTTGAAATGAAAACATTTAGAGGTGAAAATAGTGAAAATTGCAGCCCATTTAGAGAAATAGAAATTCTGAGAAAGAAATTGCAGGTGCTTGAGCAAGGCCACAAAGAGCTCAAAGAAGAAAATATGGATCTTCAATTCAAGCTTGAAGAATCAAGGAGGTATATTCAGACGTGTCGTAACTCGGCTTCTTCCTTTCTAATGCCTGATTTAAATACTGTCATAAAGATCTTTGAACTGTTCTCTGAATTGTATGAATGTTGTCGGATTTCCGCAAAAAACGAGAGGAAGCAAATGGATTCCTCTTCATTGATGTCATCTTTAGATTACAAAAGCAACTTTATGGAAGCTTATGGAAATGAAGGTTTTCATGTTGGAGAACAAGTTGAGGTTATCTTCAACAAATTTATCAAACTCAAGGATTTGTTTGAAGCAAGTTTTACACTTCATGAAGAAGGTTGTGGTTTATATGAAGGAGTTAAGAGTTTGCACATGGAATCCGGATTCGACGATACCGGTTCGGGGAAGAATCCCATTATTGGTAGTCTAAGGCATGAAAATATGCTGAAGGACAAGGAGATTGAAGGCTTGAAGCATTGTAAAAAGGAGTTGGAAGCTCAGGTTGCAAGGATTGAGGAAGAGAAGAGTCGGACGGAGGCCGATGTGACCGGTTCACTCGGAAAAAGCAGTGTGGATCTTAAGGATTTAGCCAATGATACTATTTGCAAGACATCATTGAAGTTCAAATGTGGAAATGATGAATTAGAAGTGCACTTATTAGAACTAGAGAATGAAAATATTTGCTTATCAGAAAGAATAAGTGGCTTGGAGGCTGTTCTAAGGCACCTGACCGACGAAAAGGAGTCGATTTCTTTGCTGTTACAAGATTCAGAATCTAATGTTGGGAAACTACAAAACAAAGTATGTGAATTGGCGAATGAAATAATGACACAAAAGCTTGATTTCAAACAGAAGTTACAAGACAGAAAGCAACAATTCTTTGAAGCCTTAGAAGAGATTCAGAGTTTGAAAACAGAAAACAAGAAGCTTCAAGCTATGGTTGAGAGTATAATGGAGGAACATTCTTTATTGAAGATATCAAATAATGAGCTAAGGAAGCAAAAGATGGATTTACAAGAGCATTGTGCAATCTTAGAAGTCGAAGTGAGGGACACGCTCGAACTGTTTTCCGGAATCTTAAACGAAGTTGAAAATTTAGAAGCGAGTTTTCGTAGAATGCTGAAAGAAGTTAGTTCGAAAGAGAAATCCACGAACAAAGAGCTCGATGCATTGGTTCGAGAAATCCATAAACATAACGCAAACGTTGCTCGAGACGATAGCCTGTTAAATCAGATGTACTTGGAGAAAACGGCTGAAGTCGATAATCTCGAACGAAAAGTTATGCACCTCATGAAACAAATGTCTACAACTTTTGATGAAACTGAGGGAGAAGTTGTACTTGAATTAAGTTGTTTAAGAGCAGATAAGGCAATGTTAGAAGCTGCTTTACAAGAAGCTCAAGGAAAACTTAAGCTATATGAGAGCAAGATTGATCACATTCATAAGGAAGCAGAAAGAAAAGTGATGGGAGTTATAAGTGAGCTAGAAGTTTCAAAGCAAAACCAAGAGATTCTTATGGATTATCACAGAAAAGTGTTGAGTTCCTTAGAAAACGTGAAAAATAGTGAATCAAAATCGAAGAATATGCTAAGGAGGCATGAATTCAAGTTGAAATCATCTGAAAGTGACAGACAAAATCTAGCTGAAGAAGTTTCAACTCTCAAGATAAGATTGCAAGATGAAGTTTTGGCAGTCAAGAAATCACTCATTGAATCAGAACATCAAAATAAGTGTCTCAAAGTTTCCTTTGAGATGTTATCTGAAGATTATGAGAAACTGAAGGGCAAAAATGTGATGTATTTGGAGGAAATATCTGATATGCAAAAAGTATTAACTGAATTAGGGGAATACAAAAGAAGTAAAACTGCCCTTGAGGAAAAAGTTTGGAGGCTTGAATGGGAGCTGACAGCAAAAGAAGCATCTTGTACTTTGCAATCTAAGATGAAAAATGAACTTGCAAGGTTAAGAAGAACAAATAGCCAGTTAAAAGGGAAAATAAAGTACCTAGAGGAGGAGAAAGAAGAACAAAGAAGAAATGCAGAGCCATGA

Coding sequence (CDS)

ATGTGGAAACAGAATTCTCAGAGACTTACGGCGGAGTTGGATAAGCTTCGAAGCGAACTTCAAGCCGAGACGAAGCACCGGACGAGTCTTCAGATGGAGGTTTTGGAGGTACATATTCAATGCAATGGATTGAAAGAGGAGTTTGATAAACTGAAGTTGCAAATGGAGGAGCTAAGGGAAAAACAAGAGGCCAAAGGAAGCATTCTTTTTCAAATGAAGGATAGAGATAACATAGAAAAGGAATGGGAAAGAGAAATGAAGGTTCAGAAAGATTTGAGTGATAATTTGGCTTTGGAGCTTAAGAGAAGTCAAGAGGCAAATCTTGAACTTGTTTCAAAGCAACAGATGGAGATTGAAGATATGGATACATATAGCATCAGCAGTGAAGATAACAAGAGAACAAGCTCAGAGGAACAAGATTTTCCTGAGGAAATAAGAAAGGAAATTCACGGTTCGTGTGTCGAAGAAACCGTTGTTTTATTACATGAACCGTCTGAGGAAAATGGAAGTAAAGCCTTGAAGCTTCACTTACATCAGTTGCAAGAATTTCAAAAGAATCAAGAGATTATTCCACTTGAAATGAAAACATTTAGAGGTGAAAATAGTGAAAATTGCAGCCCATTTAGAGAAATAGAAATTCTGAGAAAGAAATTGCAGGTGCTTGAGCAAGGCCACAAAGAGCTCAAAGAAGAAAATATGGATCTTCAATTCAAGCTTGAAGAATCAAGGAGGTATATTCAGACGTGTCGTAACTCGGCTTCTTCCTTTCTAATGCCTGATTTAAATACTGTCATAAAGATCTTTGAACTGTTCTCTGAATTGTATGAATGTTGTCGGATTTCCGCAAAAAACGAGAGGAAGCAAATGGATTCCTCTTCATTGATGTCATCTTTAGATTACAAAAGCAACTTTATGGAAGCTTATGGAAATGAAGGTTTTCATGTTGGAGAACAAGTTGAGGTTATCTTCAACAAATTTATCAAACTCAAGGATTTGTTTGAAGCAAGTTTTACACTTCATGAAGAAGGTTGTGGTTTATATGAAGGAGTTAAGAGTTTGCACATGGAATCCGGATTCGACGATACCGGTTCGGGGAAGAATCCCATTATTGGTAGTCTAAGGCATGAAAATATGCTGAAGGACAAGGAGATTGAAGGCTTGAAGCATTGTAAAAAGGAGTTGGAAGCTCAGGTTGCAAGGATTGAGGAAGAGAAGAGTCGGACGGAGGCCGATGTGACCGGTTCACTCGGAAAAAGCAGTGTGGATCTTAAGGATTTAGCCAATGATACTATTTGCAAGACATCATTGAAGTTCAAATGTGGAAATGATGAATTAGAAGTGCACTTATTAGAACTAGAGAATGAAAATATTTGCTTATCAGAAAGAATAAGTGGCTTGGAGGCTGTTCTAAGGCACCTGACCGACGAAAAGGAGTCGATTTCTTTGCTGTTACAAGATTCAGAATCTAATGTTGGGAAACTACAAAACAAAGTATGTGAATTGGCGAATGAAATAATGACACAAAAGCTTGATTTCAAACAGAAGTTACAAGACAGAAAGCAACAATTCTTTGAAGCCTTAGAAGAGATTCAGAGTTTGAAAACAGAAAACAAGAAGCTTCAAGCTATGGTTGAGAGTATAATGGAGGAACATTCTTTATTGAAGATATCAAATAATGAGCTAAGGAAGCAAAAGATGGATTTACAAGAGCATTGTGCAATCTTAGAAGTCGAAGTGAGGGACACGCTCGAACTGTTTTCCGGAATCTTAAACGAAGTTGAAAATTTAGAAGCGAGTTTTCGTAGAATGCTGAAAGAAGTTAGTTCGAAAGAGAAATCCACGAACAAAGAGCTCGATGCATTGGTTCGAGAAATCCATAAACATAACGCAAACGTTGCTCGAGACGATAGCCTGTTAAATCAGATGTACTTGGAGAAAACGGCTGAAGTCGATAATCTCGAACGAAAAGTTATGCACCTCATGAAACAAATGTCTACAACTTTTGATGAAACTGAGGGAGAAGTTGTACTTGAATTAAGTTGTTTAAGAGCAGATAAGGCAATGTTAGAAGCTGCTTTACAAGAAGCTCAAGGAAAACTTAAGCTATATGAGAGCAAGATTGATCACATTCATAAGGAAGCAGAAAGAAAAGTGATGGGAGTTATAAGTGAGCTAGAAGTTTCAAAGCAAAACCAAGAGATTCTTATGGATTATCACAGAAAAGTGTTGAGTTCCTTAGAAAACGTGAAAAATAGTGAATCAAAATCGAAGAATATGCTAAGGAGGCATGAATTCAAGTTGAAATCATCTGAAAGTGACAGACAAAATCTAGCTGAAGAAGTTTCAACTCTCAAGATAAGATTGCAAGATGAAGTTTTGGCAGTCAAGAAATCACTCATTGAATCAGAACATCAAAATAAGTGTCTCAAAGTTTCCTTTGAGATGTTATCTGAAGATTATGAGAAACTGAAGGGCAAAAATGTGATGTATTTGGAGGAAATATCTGATATGCAAAAAGTATTAACTGAATTAGGGGAATACAAAAGAAGTAAAACTGCCCTTGAGGAAAAAGTTTGGAGGCTTGAATGGGAGCTGACAGCAAAAGAAGCATCTTGTACTTTGCAATCTAAGATGAAAAATGAACTTGCAAGGTTAAGAAGAACAAATAGCCAGTTAAAAGGGAAAATAAAGTACCTAGAGGAGGAGAAAGAAGAACAAAGAAGAAATGCAGAGCCATGA

Protein sequence

MWKQNSQRLTAELDKLRSELQAETKHRTSLQMEVLEVHIQCNGLKEEFDKLKLQMEELREKQEAKGSILFQMKDRDNIEKEWEREMKVQKDLSDNLALELKRSQEANLELVSKQQMEIEDMDTYSISSEDNKRTSSEEQDFPEEIRKEIHGSCVEETVVLLHEPSEENGSKALKLHLHQLQEFQKNQEIIPLEMKTFRGENSENCSPFREIEILRKKLQVLEQGHKELKEENMDLQFKLEESRRYIQTCRNSASSFLMPDLNTVIKIFELFSELYECCRISAKNERKQMDSSSLMSSLDYKSNFMEAYGNEGFHVGEQVEVIFNKFIKLKDLFEASFTLHEEGCGLYEGVKSLHMESGFDDTGSGKNPIIGSLRHENMLKDKEIEGLKHCKKELEAQVARIEEEKSRTEADVTGSLGKSSVDLKDLANDTICKTSLKFKCGNDELEVHLLELENENICLSERISGLEAVLRHLTDEKESISLLLQDSESNVGKLQNKVCELANEIMTQKLDFKQKLQDRKQQFFEALEEIQSLKTENKKLQAMVESIMEEHSLLKISNNELRKQKMDLQEHCAILEVEVRDTLELFSGILNEVENLEASFRRMLKEVSSKEKSTNKELDALVREIHKHNANVARDDSLLNQMYLEKTAEVDNLERKVMHLMKQMSTTFDETEGEVVLELSCLRADKAMLEAALQEAQGKLKLYESKIDHIHKEAERKVMGVISELEVSKQNQEILMDYHRKVLSSLENVKNSESKSKNMLRRHEFKLKSSESDRQNLAEEVSTLKIRLQDEVLAVKKSLIESEHQNKCLKVSFEMLSEDYEKLKGKNVMYLEEISDMQKVLTELGEYKRSKTALEEKVWRLEWELTAKEASCTLQSKMKNELARLRRTNSQLKGKIKYLEEEKEEQRRNAEP

Homology

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BLAST of Lsi08G006750 vs. TrEMBL
Match: B9T762_RICCO (DNA repair protein RAD50, putative OS=Ricinus communis GN=RCOM_0272710 PE=4 SV=1)

HSP 1 Score: 454.9 bits (1169), Expect = 2.3e-124
Identity = 350/993 (35.25%), Postives = 551/993 (55.49%), Query Frame = 1


Query: 1    MWKQNSQRLTAELDKLRSELQAETKHRTSLQMEVLEVHIQCNGLKEEFDKLKLQMEELRE 60
            MW+QN+++L  +L+KLR EL  ++K + SL+ME+ E   +C+GLK+E +++K+ +EE   
Sbjct: 287  MWEQNARKLMNDLEKLRKELSDQSKCQASLEMELSESRRECDGLKQEIEQVKILLEESLV 346

Query: 61   KQEAKGSILFQMKDRDNIEKEWEREMKVQKDLSDNLALELKRSQEANLELVSKQQMEIED 120
            KQ++  ++  Q KD  N++KE E E++ +K+ + NLAL+LK++QE+N+ELVS  Q E+ED
Sbjct: 347  KQKSAENMELQAKDMGNLQKELEDEVRFEKESNANLALQLKKTQESNIELVSILQ-ELED 406

Query: 121  MDTYSISSEDNKRTSSEEQDFPEEIRKEIHGSCVEETVVLLHEPSEENGSKALKLHLHQL 180
                       ++   E  +  +E  +E+  + V +T  L+   ++     A+K      
Sbjct: 407  TI---------EKLKMEIANLSKEKVQELEAAEVLKTQTLMECEAQWRDKLAVK------ 466

Query: 181  QEFQKNQEIIPLEMKTFRG------ENSENCSPFREIEILRKKLQVLEQGHKELKEENMD 240
                  +EII L+ K          EN  + +  +E+E+L++K++ LE+   EL +EN++
Sbjct: 467  -----EEEIINLKSKLSEALKVDNFENGADKNLIKEVEVLKQKIEELEKDCNELTDENLE 526

Query: 241  LQFKLEESRRYIQTC------------RNSASSFLMPDLNTVIKIFELFSE--------- 300
            L  KL+ES + +  C             NS+ S    +++ +I +  +  E         
Sbjct: 527  LLLKLKESEKDLPICGASSNHLSNEYEENSSLSISESEVSKMISLKGMLEEELNKKEMFI 586

Query: 301  --------LYECCRISAKNERKQMDSSSLMSSLDYKSNFMEAYGNEGFHVGEQVEVIFNK 360
                      +C  +  K    ++          Y    +  Y       G ++  +  +
Sbjct: 587  EQLSTDHLKIQCTDLEKKCADLELHLQDFKDKTSYLDGELSIYHARAEEQGIEITALRQQ 646

Query: 361  FIKLKDLFEASFTLHEEGCGLYEGVKSLHMESGFDDTGSGKNPI------IGSLRHENML 420
                           E   G     KS H+   F D       I      I   + +N+L
Sbjct: 647  L--------------ESFQGKETETKS-HLTDNFKDIMISHKEILENKFEIDKHKSDNLL 706

Query: 421  KDKEIEGLKHCKKELEAQVA-------RIEE----------------EKSRTEADVTGSL 480
            K++E+E L+ C+++LE Q++       R+EE                + S  E  +  S 
Sbjct: 707  KEQEVEALRCCQRQLETQISILQNEKRRLEENMEVVQKRGMMSSSCLDDSNNEIMMFNSS 766

Query: 481  GKSSVDLKDLANDTICKTSLK---------------FKCGNDELEVHLLELENENICLSE 540
               S  L    N  +   S K                +    E+E+HL ELE ENI LSE
Sbjct: 767  RMMSTGLDASQNQILVLNSSKDSHVSTSEIPTRMSELESSKSEMEIHLAELEKENIELSE 826

Query: 541  RISGLEAVLRHLTDEKESISLLLQDSESNVGKLQNKVCELANEIMTQKLDFKQKLQDRKQ 600
            RI GLEA LR+LTDE+ES  L LQ+SES    LQN++  L +E  T K D KQKLQ+ + 
Sbjct: 827  RICGLEAQLRYLTDERESSRLELQNSESCALNLQNEMRRLESEWETDKGDRKQKLQEMQN 886

Query: 601  QFFEALEEIQSLKTENKKLQAMVESIMEEHSLLKISNNELRKQKMDLQEHCAILEVEVRD 660
             + EA  E + LK  N KLQ   ES+++E SLL+ S  ELRKQK++L EHC ILE E+R+
Sbjct: 887  MWLEAQSENEYLKIANLKLQTTAESLIDECSLLQKSLLELRKQKIELHEHCTILEAELRE 946

Query: 661  TLELFSGILNEVENLEASFRRMLKEVSSKEKSTNKELDALVREIHKHNANVARDDSLLNQ 720
            + + FS +L EVE LE  +  +L+E++SKEK+   E+D L+++ +K       +++ LNQ
Sbjct: 947  SQKGFSDMLKEVEALERKYILILEEIASKEKALALEVDVLLQD-NKQYKEKLEEETSLNQ 1006

Query: 721  MYLEKTAEVDNLERKVMHLMKQMSTTFDE---TEGEVVLELSCLRADKAMLEAALQEAQG 780
            +YLEK  EV+NL+++V H+ + MSTT DE   T    V+E+S LRAD+A LEA+L   +G
Sbjct: 1007 IYLEKAVEVENLQKEVAHITEHMSTTCDEKERTAAAAVVEVSRLRADRATLEASLHTVRG 1066

Query: 781  KLKLYESKIDHIHKEAERKVMGVISELEVSKQNQEILMDYHRKVLSSLENVKNSESKSKN 840
            KL+L ES +  +  E+E K++G+ +EL  S+QNQEILM  + K+L  LE+VK++E K K+
Sbjct: 1067 KLRLSESNLSTLQMESETKLLGLQNELAASRQNQEILMADNEKLLELLEDVKSNEDKYKS 1126

Query: 841  MLRRHEFKLKSSESDRQNLAEEVSTLKIRLQ------DEVLAVKKSLIESEHQNKCLKVS 900
            ++R  E KLK++  +   L EE+ +L+++LQ      DE+LA+KKSL E + +N+ L+VS
Sbjct: 1127 IVRGLELKLKATAYEGLQLKEEICSLRVQLQKTALLEDEILALKKSLNEVQFENQRLEVS 1186

Query: 901  FEMLSEDYEKLKGKNVMYLEEISDMQKVLTELGEYKRSKTALEEKVWRLEWELTAKEASC 906
             +MLS DYE+L    +  L+ ISDMQK + EL   +RSK +LEEK+ RLE +LTA+EA  
Sbjct: 1187 LQMLSGDYEELMAAKMQLLQMISDMQKAVAELEHCRRSKVSLEEKILRLEGDLTAREALG 1242

[Close]

BLAST of Lsi08G006750 vs. TrEMBL
Match: A0A061FQD1_THECC (F-box and Leucine Rich Repeat domains containing protein, putative isoform 2 (Fragment) OS=Theobroma cacao GN=TCM_043387 PE=4 SV=1)

HSP 1 Score: 445.3 bits (1144), Expect = 1.8e-121
Identity = 349/960 (36.35%), Postives = 534/960 (55.62%), Query Frame = 1


Query: 9    LTAELDKLRSELQAETKHRTSLQMEVLEVHIQCNGLKEEFDKLKLQMEELREKQEAKGSI 68
            L   L++   E++ E   R+     +++   +  G   E ++ K+   E++  +   G  
Sbjct: 445  LKKSLEEKNHEMEIEQGLRSQ---SLMDCEAEWRGKLAEKEE-KITNLEVKLSEALDGQG 504

Query: 69   LFQMKDRDNIEKEWEREMKVQKDLSDNLALELKRSQEANLELVSKQQMEIEDMDTYSIS- 128
            L +M   +       RE++  +     L  +     + NLEL+ K +   +D    S S 
Sbjct: 505  LKEMGSGNEGNSNLIREIEALRLKVQELERDCNELTDENLELLFKLKESSKDHSATSNSL 564

Query: 129  --SEDNKRTSSEEQ------DFPEEIRK----EIHGSCVEETVVLLHEPSEENGSKALKL 188
                  K + S  +      ++ +E+ K    E+H +        LH  S   G++   L
Sbjct: 565  LPDHPGKNSPSRHKLEVTSCNYEDELNKKTPTEVHSADH------LHFQSVVLGNRCAHL 624

Query: 189  HLHQLQEFQKNQEIIPLEMKTFRGENSENCSPFREIEILRKKLQVLEQGHKELKEENMDL 248
               QL+ F+     +  E+   R    E     +EIEI+  + Q+  + +++++ E+ D 
Sbjct: 625  E-PQLEAFKDKASYLDGELSECRARAEE-----QEIEIVALQQQL--KHYQQVEIESKDQ 684

Query: 249  QFKLEESRRYIQTCRNSASSFLMPDLNTVIKI-FELFSELYECCRISAKNERKQMDSSSL 308
                    R  ++      S L+ +L+  I++       LY     +  +     + S +
Sbjct: 685  PAHAFTESRISESTAAVEMSKLLAELDEQIQLSLGDIKRLYTLKSHANPHGICGSNDSQI 744

Query: 309  MSSLDYKSNFMEAYGNEGFHVGEQVEVIFNKFIKLKDLFEASFTLHE------------- 368
            + S D  S              +QVE+I N F +LK  F     + +             
Sbjct: 745  LKSTDLVSQ------------KQQVEIILNNFAQLKQFFREKIAVSDDEYYKEAKDSAVS 804

Query: 369  --------EGCGLYEGVKSLHMESGFDDTGSGKNPIIGSLRHENMLKDKEIEGLKHCKKE 428
                    EG  L E       +S      S K   I  L+ EN+LK+ E+E L+H +KE
Sbjct: 805  TDDILDKLEGFKLKELNSPCKEDSDLGKELSAKISEIEKLKSENLLKEDELEALRHQQKE 864

Query: 429  LEAQVARIEEEKSRTEADVTGSLGKSSVDLKDL-------------------ANDTICKT 488
            LEAQV+ ++ EKS+ E ++   L + +V  K L                   AN  + K 
Sbjct: 865  LEAQVSSVQTEKSQLEENIEIMLREGAVTAKCLDDLRTEIVLLNSNMDSQISANKILVKK 924

Query: 489  SLKFKCGNDELEVHLLELENENICLSERISGLEAVLRHLTDEKESISLLLQDSESNVGKL 548
            S + + G  ELEVHL ELE EN+ LSERI GLEA LR+LTDE+ES  L LQ+SES     
Sbjct: 925  SSELESGKQELEVHLSELEEENVQLSERICGLEAQLRYLTDERESHRLELQNSESQAMNF 984

Query: 549  QNKVCELANEIMTQKLDFKQKLQDRKQQFFEALEEIQSLKTENKKLQAMVESIMEEHSLL 608
            + ++  L NE+  QK+D +QK+ + ++++ E  EE + LK  N KLQA  E+++EE S+L
Sbjct: 985  KEEIKRLENEMEAQKVDMRQKMDEMQKRWLEVQEECKYLKIANPKLQATTENLIEECSML 1044

Query: 609  KISNNELRKQKMDLQEHCAILEVEVRDTLELFSGILNEVENLEASFRRMLKEVSSKEKST 668
            + +N ELRKQKM+L EHCA+LE E++++ ++FS ++NEVE LE  +  ML+E++SKEK+ 
Sbjct: 1045 QKANGELRKQKMELHEHCAVLEAELKESEKVFSNMVNEVEALEEKYSMMLEEIASKEKAL 1104

Query: 669  NKELDALVREIHKHNANVARDDSLLNQMYLEKTAEVDNLERKVMHLMKQMSTTFD---ET 728
            N EL+ L++E  K    +  ++SLLNQ YLEKT EVDNL+R+V HL +Q+S T D   +T
Sbjct: 1105 NLELEVLLQENKKQKEKLVLEESLLNQRYLEKTVEVDNLQREVAHLTEQISATQDVKEKT 1164

Query: 729  EGEVVLELSCLRADKAMLEAALQEAQGKLKLYESKIDHIHKEAERKVMGVISELEVSKQN 788
              E VLE+S LRADKAMLEAALQ+AQGKLKL ESK++ +  E E ++ G+  EL  +KQ 
Sbjct: 1165 ASEAVLEVSHLRADKAMLEAALQDAQGKLKLSESKLNAMQVECETELQGLKEELAAAKQK 1224

Query: 789  QEILMDYHRKVLSSLENVKNSESKSKNMLRRHEFKLKSSESDRQNLAEEVSTLKIR---- 848
            QEILM  H K+L  LE+VK++E K K  +R  E KLK+SE   Q L EE+S+LK++    
Sbjct: 1225 QEILMADHEKLLDLLEDVKSNEDKLKGTVRGLELKLKASEYQNQQLVEEISSLKVQLQKT 1284

Query: 849  --LQDEVLAVKKSLIESEHQNKCLKVSFEMLSEDYEKLKGKNVMYLEEISDMQKVLTELG 906
              LQDE+LA+KK++ E++ +N+ L+ SF+MLS DYE+LK +  +++++IS+ Q+ +++L 
Sbjct: 1285 ALLQDEILALKKTISETKFENERLEASFQMLSRDYEELKVERTLFVQKISNSQEAVSDLE 1344

[Close]

BLAST of Lsi08G006750 vs. TrEMBL
Match: A0A061FPQ8_THECC (F-box and Leucine Rich Repeat domains containing protein, putative isoform 3 (Fragment) OS=Theobroma cacao GN=TCM_043387 PE=4 SV=1)

HSP 1 Score: 445.3 bits (1144), Expect = 1.8e-121
Identity = 349/960 (36.35%), Postives = 534/960 (55.62%), Query Frame = 1


Query: 9    LTAELDKLRSELQAETKHRTSLQMEVLEVHIQCNGLKEEFDKLKLQMEELREKQEAKGSI 68
            L   L++   E++ E   R+     +++   +  G   E ++ K+   E++  +   G  
Sbjct: 537  LKKSLEEKNHEMEIEQGLRSQ---SLMDCEAEWRGKLAEKEE-KITNLEVKLSEALDGQG 596

Query: 69   LFQMKDRDNIEKEWEREMKVQKDLSDNLALELKRSQEANLELVSKQQMEIEDMDTYSIS- 128
            L +M   +       RE++  +     L  +     + NLEL+ K +   +D    S S 
Sbjct: 597  LKEMGSGNEGNSNLIREIEALRLKVQELERDCNELTDENLELLFKLKESSKDHSATSNSL 656

Query: 129  --SEDNKRTSSEEQ------DFPEEIRK----EIHGSCVEETVVLLHEPSEENGSKALKL 188
                  K + S  +      ++ +E+ K    E+H +        LH  S   G++   L
Sbjct: 657  LPDHPGKNSPSRHKLEVTSCNYEDELNKKTPTEVHSADH------LHFQSVVLGNRCAHL 716

Query: 189  HLHQLQEFQKNQEIIPLEMKTFRGENSENCSPFREIEILRKKLQVLEQGHKELKEENMDL 248
               QL+ F+     +  E+   R    E     +EIEI+  + Q+  + +++++ E+ D 
Sbjct: 717  E-PQLEAFKDKASYLDGELSECRARAEE-----QEIEIVALQQQL--KHYQQVEIESKDQ 776

Query: 249  QFKLEESRRYIQTCRNSASSFLMPDLNTVIKI-FELFSELYECCRISAKNERKQMDSSSL 308
                    R  ++      S L+ +L+  I++       LY     +  +     + S +
Sbjct: 777  PAHAFTESRISESTAAVEMSKLLAELDEQIQLSLGDIKRLYTLKSHANPHGICGSNDSQI 836

Query: 309  MSSLDYKSNFMEAYGNEGFHVGEQVEVIFNKFIKLKDLFEASFTLHE------------- 368
            + S D  S              +QVE+I N F +LK  F     + +             
Sbjct: 837  LKSTDLVSQ------------KQQVEIILNNFAQLKQFFREKIAVSDDEYYKEAKDSAVS 896

Query: 369  --------EGCGLYEGVKSLHMESGFDDTGSGKNPIIGSLRHENMLKDKEIEGLKHCKKE 428
                    EG  L E       +S      S K   I  L+ EN+LK+ E+E L+H +KE
Sbjct: 897  TDDILDKLEGFKLKELNSPCKEDSDLGKELSAKISEIEKLKSENLLKEDELEALRHQQKE 956

Query: 429  LEAQVARIEEEKSRTEADVTGSLGKSSVDLKDL-------------------ANDTICKT 488
            LEAQV+ ++ EKS+ E ++   L + +V  K L                   AN  + K 
Sbjct: 957  LEAQVSSVQTEKSQLEENIEIMLREGAVTAKCLDDLRTEIVLLNSNMDSQISANKILVKK 1016

Query: 489  SLKFKCGNDELEVHLLELENENICLSERISGLEAVLRHLTDEKESISLLLQDSESNVGKL 548
            S + + G  ELEVHL ELE EN+ LSERI GLEA LR+LTDE+ES  L LQ+SES     
Sbjct: 1017 SSELESGKQELEVHLSELEEENVQLSERICGLEAQLRYLTDERESHRLELQNSESQAMNF 1076

Query: 549  QNKVCELANEIMTQKLDFKQKLQDRKQQFFEALEEIQSLKTENKKLQAMVESIMEEHSLL 608
            + ++  L NE+  QK+D +QK+ + ++++ E  EE + LK  N KLQA  E+++EE S+L
Sbjct: 1077 KEEIKRLENEMEAQKVDMRQKMDEMQKRWLEVQEECKYLKIANPKLQATTENLIEECSML 1136

Query: 609  KISNNELRKQKMDLQEHCAILEVEVRDTLELFSGILNEVENLEASFRRMLKEVSSKEKST 668
            + +N ELRKQKM+L EHCA+LE E++++ ++FS ++NEVE LE  +  ML+E++SKEK+ 
Sbjct: 1137 QKANGELRKQKMELHEHCAVLEAELKESEKVFSNMVNEVEALEEKYSMMLEEIASKEKAL 1196

Query: 669  NKELDALVREIHKHNANVARDDSLLNQMYLEKTAEVDNLERKVMHLMKQMSTTFD---ET 728
            N EL+ L++E  K    +  ++SLLNQ YLEKT EVDNL+R+V HL +Q+S T D   +T
Sbjct: 1197 NLELEVLLQENKKQKEKLVLEESLLNQRYLEKTVEVDNLQREVAHLTEQISATQDVKEKT 1256

Query: 729  EGEVVLELSCLRADKAMLEAALQEAQGKLKLYESKIDHIHKEAERKVMGVISELEVSKQN 788
              E VLE+S LRADKAMLEAALQ+AQGKLKL ESK++ +  E E ++ G+  EL  +KQ 
Sbjct: 1257 ASEAVLEVSHLRADKAMLEAALQDAQGKLKLSESKLNAMQVECETELQGLKEELAAAKQK 1316

Query: 789  QEILMDYHRKVLSSLENVKNSESKSKNMLRRHEFKLKSSESDRQNLAEEVSTLKIR---- 848
            QEILM  H K+L  LE+VK++E K K  +R  E KLK+SE   Q L EE+S+LK++    
Sbjct: 1317 QEILMADHEKLLDLLEDVKSNEDKLKGTVRGLELKLKASEYQNQQLVEEISSLKVQLQKT 1376

Query: 849  --LQDEVLAVKKSLIESEHQNKCLKVSFEMLSEDYEKLKGKNVMYLEEISDMQKVLTELG 906
              LQDE+LA+KK++ E++ +N+ L+ SF+MLS DYE+LK +  +++++IS+ Q+ +++L 
Sbjct: 1377 ALLQDEILALKKTISETKFENERLEASFQMLSRDYEELKVERTLFVQKISNSQEAVSDLE 1436

[Close]

BLAST of Lsi08G006750 vs. TrEMBL
Match: A0A061FP79_THECC (F-box and Leucine Rich Repeat domains containing protein, putative isoform 1 OS=Theobroma cacao GN=TCM_043387 PE=4 SV=1)

HSP 1 Score: 445.3 bits (1144), Expect = 1.8e-121
Identity = 349/960 (36.35%), Postives = 534/960 (55.62%), Query Frame = 1


Query: 9    LTAELDKLRSELQAETKHRTSLQMEVLEVHIQCNGLKEEFDKLKLQMEELREKQEAKGSI 68
            L   L++   E++ E   R+     +++   +  G   E ++ K+   E++  +   G  
Sbjct: 550  LKKSLEEKNHEMEIEQGLRSQ---SLMDCEAEWRGKLAEKEE-KITNLEVKLSEALDGQG 609

Query: 69   LFQMKDRDNIEKEWEREMKVQKDLSDNLALELKRSQEANLELVSKQQMEIEDMDTYSIS- 128
            L +M   +       RE++  +     L  +     + NLEL+ K +   +D    S S 
Sbjct: 610  LKEMGSGNEGNSNLIREIEALRLKVQELERDCNELTDENLELLFKLKESSKDHSATSNSL 669

Query: 129  --SEDNKRTSSEEQ------DFPEEIRK----EIHGSCVEETVVLLHEPSEENGSKALKL 188
                  K + S  +      ++ +E+ K    E+H +        LH  S   G++   L
Sbjct: 670  LPDHPGKNSPSRHKLEVTSCNYEDELNKKTPTEVHSADH------LHFQSVVLGNRCAHL 729

Query: 189  HLHQLQEFQKNQEIIPLEMKTFRGENSENCSPFREIEILRKKLQVLEQGHKELKEENMDL 248
               QL+ F+     +  E+   R    E     +EIEI+  + Q+  + +++++ E+ D 
Sbjct: 730  E-PQLEAFKDKASYLDGELSECRARAEE-----QEIEIVALQQQL--KHYQQVEIESKDQ 789

Query: 249  QFKLEESRRYIQTCRNSASSFLMPDLNTVIKI-FELFSELYECCRISAKNERKQMDSSSL 308
                    R  ++      S L+ +L+  I++       LY     +  +     + S +
Sbjct: 790  PAHAFTESRISESTAAVEMSKLLAELDEQIQLSLGDIKRLYTLKSHANPHGICGSNDSQI 849

Query: 309  MSSLDYKSNFMEAYGNEGFHVGEQVEVIFNKFIKLKDLFEASFTLHE------------- 368
            + S D  S              +QVE+I N F +LK  F     + +             
Sbjct: 850  LKSTDLVSQ------------KQQVEIILNNFAQLKQFFREKIAVSDDEYYKEAKDSAVS 909

Query: 369  --------EGCGLYEGVKSLHMESGFDDTGSGKNPIIGSLRHENMLKDKEIEGLKHCKKE 428
                    EG  L E       +S      S K   I  L+ EN+LK+ E+E L+H +KE
Sbjct: 910  TDDILDKLEGFKLKELNSPCKEDSDLGKELSAKISEIEKLKSENLLKEDELEALRHQQKE 969

Query: 429  LEAQVARIEEEKSRTEADVTGSLGKSSVDLKDL-------------------ANDTICKT 488
            LEAQV+ ++ EKS+ E ++   L + +V  K L                   AN  + K 
Sbjct: 970  LEAQVSSVQTEKSQLEENIEIMLREGAVTAKCLDDLRTEIVLLNSNMDSQISANKILVKK 1029

Query: 489  SLKFKCGNDELEVHLLELENENICLSERISGLEAVLRHLTDEKESISLLLQDSESNVGKL 548
            S + + G  ELEVHL ELE EN+ LSERI GLEA LR+LTDE+ES  L LQ+SES     
Sbjct: 1030 SSELESGKQELEVHLSELEEENVQLSERICGLEAQLRYLTDERESHRLELQNSESQAMNF 1089

Query: 549  QNKVCELANEIMTQKLDFKQKLQDRKQQFFEALEEIQSLKTENKKLQAMVESIMEEHSLL 608
            + ++  L NE+  QK+D +QK+ + ++++ E  EE + LK  N KLQA  E+++EE S+L
Sbjct: 1090 KEEIKRLENEMEAQKVDMRQKMDEMQKRWLEVQEECKYLKIANPKLQATTENLIEECSML 1149

Query: 609  KISNNELRKQKMDLQEHCAILEVEVRDTLELFSGILNEVENLEASFRRMLKEVSSKEKST 668
            + +N ELRKQKM+L EHCA+LE E++++ ++FS ++NEVE LE  +  ML+E++SKEK+ 
Sbjct: 1150 QKANGELRKQKMELHEHCAVLEAELKESEKVFSNMVNEVEALEEKYSMMLEEIASKEKAL 1209

Query: 669  NKELDALVREIHKHNANVARDDSLLNQMYLEKTAEVDNLERKVMHLMKQMSTTFD---ET 728
            N EL+ L++E  K    +  ++SLLNQ YLEKT EVDNL+R+V HL +Q+S T D   +T
Sbjct: 1210 NLELEVLLQENKKQKEKLVLEESLLNQRYLEKTVEVDNLQREVAHLTEQISATQDVKEKT 1269

Query: 729  EGEVVLELSCLRADKAMLEAALQEAQGKLKLYESKIDHIHKEAERKVMGVISELEVSKQN 788
              E VLE+S LRADKAMLEAALQ+AQGKLKL ESK++ +  E E ++ G+  EL  +KQ 
Sbjct: 1270 ASEAVLEVSHLRADKAMLEAALQDAQGKLKLSESKLNAMQVECETELQGLKEELAAAKQK 1329

Query: 789  QEILMDYHRKVLSSLENVKNSESKSKNMLRRHEFKLKSSESDRQNLAEEVSTLKIR---- 848
            QEILM  H K+L  LE+VK++E K K  +R  E KLK+SE   Q L EE+S+LK++    
Sbjct: 1330 QEILMADHEKLLDLLEDVKSNEDKLKGTVRGLELKLKASEYQNQQLVEEISSLKVQLQKT 1389

Query: 849  --LQDEVLAVKKSLIESEHQNKCLKVSFEMLSEDYEKLKGKNVMYLEEISDMQKVLTELG 906
              LQDE+LA+KK++ E++ +N+ L+ SF+MLS DYE+LK +  +++++IS+ Q+ +++L 
Sbjct: 1390 ALLQDEILALKKTISETKFENERLEASFQMLSRDYEELKVERTLFVQKISNSQEAVSDLE 1449

[Close]

BLAST of Lsi08G006750 vs. TrEMBL
Match: A0A0D2RRU7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G233700 PE=4 SV=1)

HSP 1 Score: 440.7 bits (1132), Expect = 4.5e-120
Identity = 355/942 (37.69%), Postives = 530/942 (56.26%), Query Frame = 1


Query: 7    QRLTAELDKLRSELQAETKHRTSLQMEVLEVHIQCNGLKEE-FDKLKLQMEELREKQEAK 66
            Q L   L++   E++ E   R    M+      + +  KEE    L++++ E  + Q  K
Sbjct: 506  QALEKTLEEKNHEMETEQALRRQSLMDCEAEWNRKSAEKEETIINLEMKLSEAPDVQGLK 565

Query: 67   GSILFQMKDRDNIEKEWER-EMKVQKDLSDNLALELKRSQEANLELVSKQQMEIEDMDTY 126
              +  + +   N+ KE E  ++KVQ+     L  +     + NLEL  K +    D  T 
Sbjct: 566  -EMDSEKEGNSNLIKEIEDLKLKVQE-----LERDCNELTDENLELHFKLKESSRDHSTT 625

Query: 127  SISSEDNKRTSSEEQDFPEEIRKEIHGSCVEETVVLLHEPSEENGSKALKLHLHQLQEFQ 186
            S S   +    +       E+    H     ++VVL        G++   L L QL+ F+
Sbjct: 626  SNSLLPDHPGKNSFSRHEPEVPSADH--LQSQSVVL--------GNRCADLEL-QLEAFK 685

Query: 187  KNQEIIPLEMKTFRGENSENCSPFREIEILRKKLQVLEQGHKELKEENMDLQFKLEESRR 246
            +    +  E+  +R    E  +   E+  L+++LQ  +Q   + KE +      + ES  
Sbjct: 686  EKTSYLDDELSKYRARADEQET---ELVTLQQQLQHYQQTEIQSKESS------ISES-- 745

Query: 247  YIQTCRNSASSFLMPDLNTVIKIFELFSELYECCRISAKN----ERKQMDSSSLMSSLDY 306
                          PD     +   L +EL E  ++S  +    E    D S ++ S D 
Sbjct: 746  --------------PD---AFEFTTLLAELDEQIQLSLADLKRPEGTDFDDSEVLKSKDS 805

Query: 307  KSNFMEAYGNEGFHVGEQVEVIFNKFIKLKDLFEASFTLHEEGCGLYEGVKSLHMESGFD 366
             S              +QVE+I   F++LK  F         G G Y    S        
Sbjct: 806  TSQ------------KQQVEIILKNFVQLKQFFREGTV----GIGGYSKEAS-------- 865

Query: 367  DTG---SGKNPIIGSLRHENMLKDKEIEGLKHCKKELEAQVARIEEEKSRTEADVTGSLG 426
            D G   S K   IG L+ +N+LK+ E+  ++H +KELEAQV+ +++EK + E ++   LG
Sbjct: 866  DLGKQLSDKISEIGKLKSDNLLKEDELVAIRHHQKELEAQVSSLQKEKIQLEENIEIMLG 925

Query: 427  KSSVDLKDLA-------------------NDTICKTSLKFKCGNDELEVHLLELENENIC 486
            + +V  K L                    N  + K S + + G  ELEVHL ELE EN+ 
Sbjct: 926  EGAVTAKCLGDLRSKMMVLNSNMDSQISTNKILVKKSEELESGKQELEVHLSELEEENLQ 985

Query: 487  LSERISGLEAVLRHLTDEKESISLLLQDSESNVGKLQNKVCELANEIMTQKLDFKQKLQD 546
            LSERISGLEA LR+LTDE+ES  L LQ+SES   +L+ ++  L NEI  QK+D +QK+++
Sbjct: 986  LSERISGLEAQLRYLTDERESHRLELQNSESQAMELKGEITRLENEIEAQKVDMRQKMEE 1045

Query: 547  RKQQFFEALEEIQSLKTENKKLQAMVESIMEEHSLLKISNNELRKQKMDLQEHCAILEVE 606
             ++++ E  EE + LK  N KLQA  ES++EE S+L+ +N ELRKQK +L EHCA+LE E
Sbjct: 1046 MQKRWLEVQEECEYLKVANPKLQATTESLIEECSVLQKANRELRKQKAELNEHCAVLEAE 1105

Query: 607  VRDTLELFSGILNEVENLEASFRRMLKEVSSKEKSTNKELDALVREIHKHNANVARDDSL 666
            ++++ ++FS + +EVE LE  +  ML+E++SKEK+ N EL+AL+ E  K    +  ++SL
Sbjct: 1106 LKESEKVFSNMTSEVEALEEKYSSMLEEIASKEKALNLELEALLEENKKQKEKLVLEESL 1165

Query: 667  LNQMYLEKTAEVDNLERKVMHLMKQMSTTFDE---TEGEVVLELSCLRADKAMLEAALQE 726
            LNQ YLEKTAEV+NL+R+V HL +Q+S T DE   T  E VLE+S LRADKAMLEAALQ+
Sbjct: 1166 LNQKYLEKTAEVENLQREVAHLTEQISATQDEKEKTASEAVLEVSHLRADKAMLEAALQD 1225

Query: 727  AQGKLKLYESKIDHIHKEAERKVMGVISELEVSKQNQEILMDYHRKVLSSLENVKNSESK 786
             QGKLKL + K++    E+E +   +  EL  +KQ QEILM  H K+L  LE+VK++E K
Sbjct: 1226 LQGKLKLSDGKLNTFQVESETEAQELKEELASAKQKQEILMADHEKLLDLLEDVKSNEDK 1285

Query: 787  SKNMLRRHEFKLKSSESDRQNLAEEVSTLKIR------LQDEVLAVKKSLIESEHQNKCL 846
             K  +R  E KLK+SE + Q LAEE+S+LK++      LQDE+L +KK++ ES+ +N+ L
Sbjct: 1286 LKGTVRGLELKLKASEYENQQLAEEISSLKVQLQKTTVLQDEILDLKKTISESKFENERL 1345

Query: 847  KVSFEMLSEDYEKLKGKNVMYLEEISDMQKVLTELGEYKRSKTALEEKVWRLEWELTAKE 906
            + SF+MLS DYE+LK +  +  E++S+ Q+ ++EL   +R K ALEEKV RL+ +LTA+E
Sbjct: 1346 EASFQMLSRDYEELKVERTLLAEKVSNSQQAVSELDACRRRKVALEEKVLRLQGDLTARE 1378

Query: 907  ASCTLQSKMKNELARLRRTNSQLKGKIKYLEEEKEEQRRNAE 912
            A  T ++ +KNELA++RR NSQL+ KIK LEEEK++  + A+
Sbjct: 1406 ALGTQEAALKNELAQIRRENSQLQRKIKKLEEEKDDCLKKAQ 1378

[Close]

BLAST of Lsi08G006750 vs. NCBI nr
Match: gi|296085937|emb|CBI31378.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 462.2 bits (1188), Expect = 2.1e-126
Identity = 350/968 (36.16%), Postives = 541/968 (55.89%), Query Frame = 1


Query: 1    MWKQNSQRLTAELDKLRSELQAETKHRTSLQMEVLEVHIQCNGLKEEFDKLKLQMEELRE 60
            MW+QN+++L  +L+ LR E   ++K++  L ME+   H +CN L++E ++L   +EEL  
Sbjct: 277  MWEQNARKLMHDLEILRKEFSNQSKNQADLDMELAASHTECNRLRQEIEQLNFLLEELTV 336

Query: 61   KQEAKGSILFQMKDRDNIEKEWEREMKVQKDLSDNLALELKRSQEANLELVS-----KQQ 120
            +Q+   ++  Q ++ +NI++E E E+K QK+ + NL ++LK++QE+N+ELVS     ++ 
Sbjct: 337  RQKDTENLKLQAQNMNNIQQELEDEIKFQKESNANLTIQLKKTQESNIELVSVLQEMEEM 396

Query: 121  MEIEDMDTYSISSEDNKRTSSEEQDFPEEIRKEIHGSCVEETVVLLHEPSEENGSKALKL 180
            +E + M+   +S   +K    E Q   +         C EE    L     +  S   KL
Sbjct: 397  IEKQKMEITDLSMLKSKFDVDESQALLD---------CQEEWKCKLAAKEVDIISLETKL 456

Query: 181  HLHQLQEFQKNQEIIPLEMKTFRGENSENCSPFREIEILRKKLQVLEQGHKELKEENMDL 240
                      ++ I  L +K    +N  + +  +EIE L+ K+Q LE+   EL +EN+ L
Sbjct: 457  ----------SEAIHALNVKETGPQNGGDHNLIKEIEALKVKVQELERDCVELTDENLSL 516

Query: 241  QFKLEESRRYIQTCRNS-------------ASSFLMP---------DLNTVIKIFE---- 300
             FK++ES + + TC  S             A++F +          DL   ++IF+    
Sbjct: 517  HFKIKESSKDLMTCAASFKSLSSEFVGNVTANNFQLQCTDLNNKCTDLELQLQIFKDKAC 576

Query: 301  -LFSELYECCRISAKNERKQMDSSSLMSSLDYKSNFMEAYGNEGFHVGEQVEVIFNKFIK 360
             L SELY C     K E ++++ ++L   L+                  QVE I N  I+
Sbjct: 577  HLDSELYNC---HTKAEEQEIEIAALQLQLNQHQEATLITQKA------QVESILNNLIQ 636

Query: 361  LKDLFEASFTLHEEGCGLYEGVKSLHMESGFDDTGSG---KNPIIGSLRHENMLKDKEIE 420
            L  LFEA  T             ++ +ES F D       K   I  L+  ++LK++EI 
Sbjct: 637  LNKLFEAKTT-----------DLNIELESEFTDLSKELLVKICEIDKLKANHLLKEEEIV 696

Query: 421  GLKHCKKELEAQVARIEEEKSRTEADVTGSLGKSSVDLK---DLANDTIC---------- 480
             ++HC+++LE Q++ ++ EK + E ++     +SSV  K   DL ND +           
Sbjct: 697  AVRHCQRDLETQISNLQAEKRQLEENMEIMQRESSVTSKCLDDLRNDMVLLNTSMESLVS 756

Query: 481  ------KTSLKFKCGNDELEVHLLELENENICLSERISGLEAVLRHLTDEKESISLLLQD 540
                  + SL+ +   DELE+HL ELE EN+ LSERISGLEA LR+ TDE+ES       
Sbjct: 757  SNKILERKSLELESSKDELELHLSELEEENVQLSERISGLEAQLRYFTDERES------- 816

Query: 541  SESNVGKLQNKVCELANEIMTQKLDFKQKLQDRKQQFFEALEEIQSLKTENKKLQAMVES 600
                 G+L         ++  + L+ +++ +  KQ   +     +SL  E   LQ     
Sbjct: 817  -----GRL---------DMQKRWLESQEECEYLKQANPKLQATAESLIEECSSLQK---- 876

Query: 601  IMEEHSLLKISNNELRKQKMDLQEHCAILEVEVRDTLELFSGILNEVENLEASFRRMLKE 660
                      SN ELRKQK+++ E C +LE ++R++ E F     ++E+LE +    L+E
Sbjct: 877  ----------SNGELRKQKLEMYERCTVLEAKLRESQEYFLYCSRKIEDLEETLSSTLEE 936

Query: 661  VSSKEKSTNKELDALVREIHKHNANVARDDSLLNQMYLEKTAEVDNLERKVMHLMKQMST 720
            +S KEK+ N EL+ LV+E   H   +A +++LLNQMYLEKT EV++L+R++ HL +Q+S 
Sbjct: 937  ISVKEKTLNTELETLVQENRNHKEKLAVEENLLNQMYLEKTVEVEDLKREIAHLSEQISA 996

Query: 721  TFDE---TEGEVVLELSCLRADKAMLEAALQEAQGKLKLYESKIDHIHKEAERKVMGVIS 780
            T DE   T  E VLE+SCLRADKA LEAALQE + K    E+K++ +  E+E K+MG++S
Sbjct: 997  TQDEREQTASEAVLEVSCLRADKAKLEAALQEVKEKFTNSENKLNTVRVESETKLMGLVS 1056

Query: 781  ELEVSKQNQEILMDYHRKVLSSLENVKNSESKSKNMLRRHEFKLKSSESDRQNLAEEVST 840
            EL  ++QNQE+L   H K+L  L  VK++E K K  + R   KLK+SE + Q   EE+S+
Sbjct: 1057 ELAATRQNQEVLAADHAKLLGLLAEVKSNEEKLKGTINRVGLKLKTSEYEMQQQTEEISS 1116

Query: 841  LKIR------LQDEVLAVKKSLIESEHQNKCLKVSFEMLSEDYEKLKGKNVMYLEEISDM 900
            LK++      LQDEVLA+K+SL E++ +N+ L+ S ++ S DYE LK + + ++++IS M
Sbjct: 1117 LKMQLQKTALLQDEVLALKRSLNEAKFENERLEASLQLQSADYEDLKAEKISFIQKISSM 1170

Query: 901  QKVLTELGEYKRSKTALEEKVWRLEWELTAKEASCTLQSKMKNELARLRRTNSQLKGKIK 906
            Q  ++EL + K SK ALEEK+ RLE +LTA+EA C   ++MKNEL R++RTNSQ + KIK
Sbjct: 1177 QAAVSELEDCKSSKVALEEKILRLEGDLTAREALCARDAEMKNELGRIKRTNSQFRWKIK 1170

[Close]

BLAST of Lsi08G006750 vs. NCBI nr
Match: gi|223525882|gb|EEF28304.1| (DNA repair protein RAD50, putative [Ricinus communis])

HSP 1 Score: 454.9 bits (1169), Expect = 3.3e-124
Identity = 350/993 (35.25%), Postives = 551/993 (55.49%), Query Frame = 1


Query: 1    MWKQNSQRLTAELDKLRSELQAETKHRTSLQMEVLEVHIQCNGLKEEFDKLKLQMEELRE 60
            MW+QN+++L  +L+KLR EL  ++K + SL+ME+ E   +C+GLK+E +++K+ +EE   
Sbjct: 287  MWEQNARKLMNDLEKLRKELSDQSKCQASLEMELSESRRECDGLKQEIEQVKILLEESLV 346

Query: 61   KQEAKGSILFQMKDRDNIEKEWEREMKVQKDLSDNLALELKRSQEANLELVSKQQMEIED 120
            KQ++  ++  Q KD  N++KE E E++ +K+ + NLAL+LK++QE+N+ELVS  Q E+ED
Sbjct: 347  KQKSAENMELQAKDMGNLQKELEDEVRFEKESNANLALQLKKTQESNIELVSILQ-ELED 406

Query: 121  MDTYSISSEDNKRTSSEEQDFPEEIRKEIHGSCVEETVVLLHEPSEENGSKALKLHLHQL 180
                       ++   E  +  +E  +E+  + V +T  L+   ++     A+K      
Sbjct: 407  TI---------EKLKMEIANLSKEKVQELEAAEVLKTQTLMECEAQWRDKLAVK------ 466

Query: 181  QEFQKNQEIIPLEMKTFRG------ENSENCSPFREIEILRKKLQVLEQGHKELKEENMD 240
                  +EII L+ K          EN  + +  +E+E+L++K++ LE+   EL +EN++
Sbjct: 467  -----EEEIINLKSKLSEALKVDNFENGADKNLIKEVEVLKQKIEELEKDCNELTDENLE 526

Query: 241  LQFKLEESRRYIQTC------------RNSASSFLMPDLNTVIKIFELFSE--------- 300
            L  KL+ES + +  C             NS+ S    +++ +I +  +  E         
Sbjct: 527  LLLKLKESEKDLPICGASSNHLSNEYEENSSLSISESEVSKMISLKGMLEEELNKKEMFI 586

Query: 301  --------LYECCRISAKNERKQMDSSSLMSSLDYKSNFMEAYGNEGFHVGEQVEVIFNK 360
                      +C  +  K    ++          Y    +  Y       G ++  +  +
Sbjct: 587  EQLSTDHLKIQCTDLEKKCADLELHLQDFKDKTSYLDGELSIYHARAEEQGIEITALRQQ 646

Query: 361  FIKLKDLFEASFTLHEEGCGLYEGVKSLHMESGFDDTGSGKNPI------IGSLRHENML 420
                           E   G     KS H+   F D       I      I   + +N+L
Sbjct: 647  L--------------ESFQGKETETKS-HLTDNFKDIMISHKEILENKFEIDKHKSDNLL 706

Query: 421  KDKEIEGLKHCKKELEAQVA-------RIEE----------------EKSRTEADVTGSL 480
            K++E+E L+ C+++LE Q++       R+EE                + S  E  +  S 
Sbjct: 707  KEQEVEALRCCQRQLETQISILQNEKRRLEENMEVVQKRGMMSSSCLDDSNNEIMMFNSS 766

Query: 481  GKSSVDLKDLANDTICKTSLK---------------FKCGNDELEVHLLELENENICLSE 540
               S  L    N  +   S K                +    E+E+HL ELE ENI LSE
Sbjct: 767  RMMSTGLDASQNQILVLNSSKDSHVSTSEIPTRMSELESSKSEMEIHLAELEKENIELSE 826

Query: 541  RISGLEAVLRHLTDEKESISLLLQDSESNVGKLQNKVCELANEIMTQKLDFKQKLQDRKQ 600
            RI GLEA LR+LTDE+ES  L LQ+SES    LQN++  L +E  T K D KQKLQ+ + 
Sbjct: 827  RICGLEAQLRYLTDERESSRLELQNSESCALNLQNEMRRLESEWETDKGDRKQKLQEMQN 886

Query: 601  QFFEALEEIQSLKTENKKLQAMVESIMEEHSLLKISNNELRKQKMDLQEHCAILEVEVRD 660
             + EA  E + LK  N KLQ   ES+++E SLL+ S  ELRKQK++L EHC ILE E+R+
Sbjct: 887  MWLEAQSENEYLKIANLKLQTTAESLIDECSLLQKSLLELRKQKIELHEHCTILEAELRE 946

Query: 661  TLELFSGILNEVENLEASFRRMLKEVSSKEKSTNKELDALVREIHKHNANVARDDSLLNQ 720
            + + FS +L EVE LE  +  +L+E++SKEK+   E+D L+++ +K       +++ LNQ
Sbjct: 947  SQKGFSDMLKEVEALERKYILILEEIASKEKALALEVDVLLQD-NKQYKEKLEEETSLNQ 1006

Query: 721  MYLEKTAEVDNLERKVMHLMKQMSTTFDE---TEGEVVLELSCLRADKAMLEAALQEAQG 780
            +YLEK  EV+NL+++V H+ + MSTT DE   T    V+E+S LRAD+A LEA+L   +G
Sbjct: 1007 IYLEKAVEVENLQKEVAHITEHMSTTCDEKERTAAAAVVEVSRLRADRATLEASLHTVRG 1066

Query: 781  KLKLYESKIDHIHKEAERKVMGVISELEVSKQNQEILMDYHRKVLSSLENVKNSESKSKN 840
            KL+L ES +  +  E+E K++G+ +EL  S+QNQEILM  + K+L  LE+VK++E K K+
Sbjct: 1067 KLRLSESNLSTLQMESETKLLGLQNELAASRQNQEILMADNEKLLELLEDVKSNEDKYKS 1126

Query: 841  MLRRHEFKLKSSESDRQNLAEEVSTLKIRLQ------DEVLAVKKSLIESEHQNKCLKVS 900
            ++R  E KLK++  +   L EE+ +L+++LQ      DE+LA+KKSL E + +N+ L+VS
Sbjct: 1127 IVRGLELKLKATAYEGLQLKEEICSLRVQLQKTALLEDEILALKKSLNEVQFENQRLEVS 1186

Query: 901  FEMLSEDYEKLKGKNVMYLEEISDMQKVLTELGEYKRSKTALEEKVWRLEWELTAKEASC 906
             +MLS DYE+L    +  L+ ISDMQK + EL   +RSK +LEEK+ RLE +LTA+EA  
Sbjct: 1187 LQMLSGDYEELMAAKMQLLQMISDMQKAVAELEHCRRSKVSLEEKILRLEGDLTAREALG 1242

[Close]

BLAST of Lsi08G006750 vs. NCBI nr
Match: gi|590565896|ref|XP_007010077.1| (F-box and Leucine Rich Repeat domains containing protein, putative isoform 2, partial [Theobroma cacao])

HSP 1 Score: 445.3 bits (1144), Expect = 2.6e-121
Identity = 349/960 (36.35%), Postives = 534/960 (55.62%), Query Frame = 1


Query: 9    LTAELDKLRSELQAETKHRTSLQMEVLEVHIQCNGLKEEFDKLKLQMEELREKQEAKGSI 68
            L   L++   E++ E   R+     +++   +  G   E ++ K+   E++  +   G  
Sbjct: 445  LKKSLEEKNHEMEIEQGLRSQ---SLMDCEAEWRGKLAEKEE-KITNLEVKLSEALDGQG 504

Query: 69   LFQMKDRDNIEKEWEREMKVQKDLSDNLALELKRSQEANLELVSKQQMEIEDMDTYSIS- 128
            L +M   +       RE++  +     L  +     + NLEL+ K +   +D    S S 
Sbjct: 505  LKEMGSGNEGNSNLIREIEALRLKVQELERDCNELTDENLELLFKLKESSKDHSATSNSL 564

Query: 129  --SEDNKRTSSEEQ------DFPEEIRK----EIHGSCVEETVVLLHEPSEENGSKALKL 188
                  K + S  +      ++ +E+ K    E+H +        LH  S   G++   L
Sbjct: 565  LPDHPGKNSPSRHKLEVTSCNYEDELNKKTPTEVHSADH------LHFQSVVLGNRCAHL 624

Query: 189  HLHQLQEFQKNQEIIPLEMKTFRGENSENCSPFREIEILRKKLQVLEQGHKELKEENMDL 248
               QL+ F+     +  E+   R    E     +EIEI+  + Q+  + +++++ E+ D 
Sbjct: 625  E-PQLEAFKDKASYLDGELSECRARAEE-----QEIEIVALQQQL--KHYQQVEIESKDQ 684

Query: 249  QFKLEESRRYIQTCRNSASSFLMPDLNTVIKI-FELFSELYECCRISAKNERKQMDSSSL 308
                    R  ++      S L+ +L+  I++       LY     +  +     + S +
Sbjct: 685  PAHAFTESRISESTAAVEMSKLLAELDEQIQLSLGDIKRLYTLKSHANPHGICGSNDSQI 744

Query: 309  MSSLDYKSNFMEAYGNEGFHVGEQVEVIFNKFIKLKDLFEASFTLHE------------- 368
            + S D  S              +QVE+I N F +LK  F     + +             
Sbjct: 745  LKSTDLVSQ------------KQQVEIILNNFAQLKQFFREKIAVSDDEYYKEAKDSAVS 804

Query: 369  --------EGCGLYEGVKSLHMESGFDDTGSGKNPIIGSLRHENMLKDKEIEGLKHCKKE 428
                    EG  L E       +S      S K   I  L+ EN+LK+ E+E L+H +KE
Sbjct: 805  TDDILDKLEGFKLKELNSPCKEDSDLGKELSAKISEIEKLKSENLLKEDELEALRHQQKE 864

Query: 429  LEAQVARIEEEKSRTEADVTGSLGKSSVDLKDL-------------------ANDTICKT 488
            LEAQV+ ++ EKS+ E ++   L + +V  K L                   AN  + K 
Sbjct: 865  LEAQVSSVQTEKSQLEENIEIMLREGAVTAKCLDDLRTEIVLLNSNMDSQISANKILVKK 924

Query: 489  SLKFKCGNDELEVHLLELENENICLSERISGLEAVLRHLTDEKESISLLLQDSESNVGKL 548
            S + + G  ELEVHL ELE EN+ LSERI GLEA LR+LTDE+ES  L LQ+SES     
Sbjct: 925  SSELESGKQELEVHLSELEEENVQLSERICGLEAQLRYLTDERESHRLELQNSESQAMNF 984

Query: 549  QNKVCELANEIMTQKLDFKQKLQDRKQQFFEALEEIQSLKTENKKLQAMVESIMEEHSLL 608
            + ++  L NE+  QK+D +QK+ + ++++ E  EE + LK  N KLQA  E+++EE S+L
Sbjct: 985  KEEIKRLENEMEAQKVDMRQKMDEMQKRWLEVQEECKYLKIANPKLQATTENLIEECSML 1044

Query: 609  KISNNELRKQKMDLQEHCAILEVEVRDTLELFSGILNEVENLEASFRRMLKEVSSKEKST 668
            + +N ELRKQKM+L EHCA+LE E++++ ++FS ++NEVE LE  +  ML+E++SKEK+ 
Sbjct: 1045 QKANGELRKQKMELHEHCAVLEAELKESEKVFSNMVNEVEALEEKYSMMLEEIASKEKAL 1104

Query: 669  NKELDALVREIHKHNANVARDDSLLNQMYLEKTAEVDNLERKVMHLMKQMSTTFD---ET 728
            N EL+ L++E  K    +  ++SLLNQ YLEKT EVDNL+R+V HL +Q+S T D   +T
Sbjct: 1105 NLELEVLLQENKKQKEKLVLEESLLNQRYLEKTVEVDNLQREVAHLTEQISATQDVKEKT 1164

Query: 729  EGEVVLELSCLRADKAMLEAALQEAQGKLKLYESKIDHIHKEAERKVMGVISELEVSKQN 788
              E VLE+S LRADKAMLEAALQ+AQGKLKL ESK++ +  E E ++ G+  EL  +KQ 
Sbjct: 1165 ASEAVLEVSHLRADKAMLEAALQDAQGKLKLSESKLNAMQVECETELQGLKEELAAAKQK 1224

Query: 789  QEILMDYHRKVLSSLENVKNSESKSKNMLRRHEFKLKSSESDRQNLAEEVSTLKIR---- 848
            QEILM  H K+L  LE+VK++E K K  +R  E KLK+SE   Q L EE+S+LK++    
Sbjct: 1225 QEILMADHEKLLDLLEDVKSNEDKLKGTVRGLELKLKASEYQNQQLVEEISSLKVQLQKT 1284

Query: 849  --LQDEVLAVKKSLIESEHQNKCLKVSFEMLSEDYEKLKGKNVMYLEEISDMQKVLTELG 906
              LQDE+LA+KK++ E++ +N+ L+ SF+MLS DYE+LK +  +++++IS+ Q+ +++L 
Sbjct: 1285 ALLQDEILALKKTISETKFENERLEASFQMLSRDYEELKVERTLFVQKISNSQEAVSDLE 1344

[Close]

BLAST of Lsi08G006750 vs. NCBI nr
Match: gi|590565893|ref|XP_007010076.1| (F-box and Leucine Rich Repeat domains containing protein, putative isoform 1 [Theobroma cacao])

HSP 1 Score: 445.3 bits (1144), Expect = 2.6e-121
Identity = 349/960 (36.35%), Postives = 534/960 (55.62%), Query Frame = 1


Query: 9    LTAELDKLRSELQAETKHRTSLQMEVLEVHIQCNGLKEEFDKLKLQMEELREKQEAKGSI 68
            L   L++   E++ E   R+     +++   +  G   E ++ K+   E++  +   G  
Sbjct: 550  LKKSLEEKNHEMEIEQGLRSQ---SLMDCEAEWRGKLAEKEE-KITNLEVKLSEALDGQG 609

Query: 69   LFQMKDRDNIEKEWEREMKVQKDLSDNLALELKRSQEANLELVSKQQMEIEDMDTYSIS- 128
            L +M   +       RE++  +     L  +     + NLEL+ K +   +D    S S 
Sbjct: 610  LKEMGSGNEGNSNLIREIEALRLKVQELERDCNELTDENLELLFKLKESSKDHSATSNSL 669

Query: 129  --SEDNKRTSSEEQ------DFPEEIRK----EIHGSCVEETVVLLHEPSEENGSKALKL 188
                  K + S  +      ++ +E+ K    E+H +        LH  S   G++   L
Sbjct: 670  LPDHPGKNSPSRHKLEVTSCNYEDELNKKTPTEVHSADH------LHFQSVVLGNRCAHL 729

Query: 189  HLHQLQEFQKNQEIIPLEMKTFRGENSENCSPFREIEILRKKLQVLEQGHKELKEENMDL 248
               QL+ F+     +  E+   R    E     +EIEI+  + Q+  + +++++ E+ D 
Sbjct: 730  E-PQLEAFKDKASYLDGELSECRARAEE-----QEIEIVALQQQL--KHYQQVEIESKDQ 789

Query: 249  QFKLEESRRYIQTCRNSASSFLMPDLNTVIKI-FELFSELYECCRISAKNERKQMDSSSL 308
                    R  ++      S L+ +L+  I++       LY     +  +     + S +
Sbjct: 790  PAHAFTESRISESTAAVEMSKLLAELDEQIQLSLGDIKRLYTLKSHANPHGICGSNDSQI 849

Query: 309  MSSLDYKSNFMEAYGNEGFHVGEQVEVIFNKFIKLKDLFEASFTLHE------------- 368
            + S D  S              +QVE+I N F +LK  F     + +             
Sbjct: 850  LKSTDLVSQ------------KQQVEIILNNFAQLKQFFREKIAVSDDEYYKEAKDSAVS 909

Query: 369  --------EGCGLYEGVKSLHMESGFDDTGSGKNPIIGSLRHENMLKDKEIEGLKHCKKE 428
                    EG  L E       +S      S K   I  L+ EN+LK+ E+E L+H +KE
Sbjct: 910  TDDILDKLEGFKLKELNSPCKEDSDLGKELSAKISEIEKLKSENLLKEDELEALRHQQKE 969

Query: 429  LEAQVARIEEEKSRTEADVTGSLGKSSVDLKDL-------------------ANDTICKT 488
            LEAQV+ ++ EKS+ E ++   L + +V  K L                   AN  + K 
Sbjct: 970  LEAQVSSVQTEKSQLEENIEIMLREGAVTAKCLDDLRTEIVLLNSNMDSQISANKILVKK 1029

Query: 489  SLKFKCGNDELEVHLLELENENICLSERISGLEAVLRHLTDEKESISLLLQDSESNVGKL 548
            S + + G  ELEVHL ELE EN+ LSERI GLEA LR+LTDE+ES  L LQ+SES     
Sbjct: 1030 SSELESGKQELEVHLSELEEENVQLSERICGLEAQLRYLTDERESHRLELQNSESQAMNF 1089

Query: 549  QNKVCELANEIMTQKLDFKQKLQDRKQQFFEALEEIQSLKTENKKLQAMVESIMEEHSLL 608
            + ++  L NE+  QK+D +QK+ + ++++ E  EE + LK  N KLQA  E+++EE S+L
Sbjct: 1090 KEEIKRLENEMEAQKVDMRQKMDEMQKRWLEVQEECKYLKIANPKLQATTENLIEECSML 1149

Query: 609  KISNNELRKQKMDLQEHCAILEVEVRDTLELFSGILNEVENLEASFRRMLKEVSSKEKST 668
            + +N ELRKQKM+L EHCA+LE E++++ ++FS ++NEVE LE  +  ML+E++SKEK+ 
Sbjct: 1150 QKANGELRKQKMELHEHCAVLEAELKESEKVFSNMVNEVEALEEKYSMMLEEIASKEKAL 1209

Query: 669  NKELDALVREIHKHNANVARDDSLLNQMYLEKTAEVDNLERKVMHLMKQMSTTFD---ET 728
            N EL+ L++E  K    +  ++SLLNQ YLEKT EVDNL+R+V HL +Q+S T D   +T
Sbjct: 1210 NLELEVLLQENKKQKEKLVLEESLLNQRYLEKTVEVDNLQREVAHLTEQISATQDVKEKT 1269

Query: 729  EGEVVLELSCLRADKAMLEAALQEAQGKLKLYESKIDHIHKEAERKVMGVISELEVSKQN 788
              E VLE+S LRADKAMLEAALQ+AQGKLKL ESK++ +  E E ++ G+  EL  +KQ 
Sbjct: 1270 ASEAVLEVSHLRADKAMLEAALQDAQGKLKLSESKLNAMQVECETELQGLKEELAAAKQK 1329

Query: 789  QEILMDYHRKVLSSLENVKNSESKSKNMLRRHEFKLKSSESDRQNLAEEVSTLKIR---- 848
            QEILM  H K+L  LE+VK++E K K  +R  E KLK+SE   Q L EE+S+LK++    
Sbjct: 1330 QEILMADHEKLLDLLEDVKSNEDKLKGTVRGLELKLKASEYQNQQLVEEISSLKVQLQKT 1389

Query: 849  --LQDEVLAVKKSLIESEHQNKCLKVSFEMLSEDYEKLKGKNVMYLEEISDMQKVLTELG 906
              LQDE+LA+KK++ E++ +N+ L+ SF+MLS DYE+LK +  +++++IS+ Q+ +++L 
Sbjct: 1390 ALLQDEILALKKTISETKFENERLEASFQMLSRDYEELKVERTLFVQKISNSQEAVSDLE 1449

[Close]

BLAST of Lsi08G006750 vs. NCBI nr
Match: gi|590565899|ref|XP_007010078.1| (F-box and Leucine Rich Repeat domains containing protein, putative isoform 3, partial [Theobroma cacao])

HSP 1 Score: 445.3 bits (1144), Expect = 2.6e-121
Identity = 349/960 (36.35%), Postives = 534/960 (55.62%), Query Frame = 1


Query: 9    LTAELDKLRSELQAETKHRTSLQMEVLEVHIQCNGLKEEFDKLKLQMEELREKQEAKGSI 68
            L   L++   E++ E   R+     +++   +  G   E ++ K+   E++  +   G  
Sbjct: 537  LKKSLEEKNHEMEIEQGLRSQ---SLMDCEAEWRGKLAEKEE-KITNLEVKLSEALDGQG 596

Query: 69   LFQMKDRDNIEKEWEREMKVQKDLSDNLALELKRSQEANLELVSKQQMEIEDMDTYSIS- 128
            L +M   +       RE++  +     L  +     + NLEL+ K +   +D    S S 
Sbjct: 597  LKEMGSGNEGNSNLIREIEALRLKVQELERDCNELTDENLELLFKLKESSKDHSATSNSL 656

Query: 129  --SEDNKRTSSEEQ------DFPEEIRK----EIHGSCVEETVVLLHEPSEENGSKALKL 188
                  K + S  +      ++ +E+ K    E+H +        LH  S   G++   L
Sbjct: 657  LPDHPGKNSPSRHKLEVTSCNYEDELNKKTPTEVHSADH------LHFQSVVLGNRCAHL 716

Query: 189  HLHQLQEFQKNQEIIPLEMKTFRGENSENCSPFREIEILRKKLQVLEQGHKELKEENMDL 248
               QL+ F+     +  E+   R    E     +EIEI+  + Q+  + +++++ E+ D 
Sbjct: 717  E-PQLEAFKDKASYLDGELSECRARAEE-----QEIEIVALQQQL--KHYQQVEIESKDQ 776

Query: 249  QFKLEESRRYIQTCRNSASSFLMPDLNTVIKI-FELFSELYECCRISAKNERKQMDSSSL 308
                    R  ++      S L+ +L+  I++       LY     +  +     + S +
Sbjct: 777  PAHAFTESRISESTAAVEMSKLLAELDEQIQLSLGDIKRLYTLKSHANPHGICGSNDSQI 836

Query: 309  MSSLDYKSNFMEAYGNEGFHVGEQVEVIFNKFIKLKDLFEASFTLHE------------- 368
            + S D  S              +QVE+I N F +LK  F     + +             
Sbjct: 837  LKSTDLVSQ------------KQQVEIILNNFAQLKQFFREKIAVSDDEYYKEAKDSAVS 896

Query: 369  --------EGCGLYEGVKSLHMESGFDDTGSGKNPIIGSLRHENMLKDKEIEGLKHCKKE 428
                    EG  L E       +S      S K   I  L+ EN+LK+ E+E L+H +KE
Sbjct: 897  TDDILDKLEGFKLKELNSPCKEDSDLGKELSAKISEIEKLKSENLLKEDELEALRHQQKE 956

Query: 429  LEAQVARIEEEKSRTEADVTGSLGKSSVDLKDL-------------------ANDTICKT 488
            LEAQV+ ++ EKS+ E ++   L + +V  K L                   AN  + K 
Sbjct: 957  LEAQVSSVQTEKSQLEENIEIMLREGAVTAKCLDDLRTEIVLLNSNMDSQISANKILVKK 1016

Query: 489  SLKFKCGNDELEVHLLELENENICLSERISGLEAVLRHLTDEKESISLLLQDSESNVGKL 548
            S + + G  ELEVHL ELE EN+ LSERI GLEA LR+LTDE+ES  L LQ+SES     
Sbjct: 1017 SSELESGKQELEVHLSELEEENVQLSERICGLEAQLRYLTDERESHRLELQNSESQAMNF 1076

Query: 549  QNKVCELANEIMTQKLDFKQKLQDRKQQFFEALEEIQSLKTENKKLQAMVESIMEEHSLL 608
            + ++  L NE+  QK+D +QK+ + ++++ E  EE + LK  N KLQA  E+++EE S+L
Sbjct: 1077 KEEIKRLENEMEAQKVDMRQKMDEMQKRWLEVQEECKYLKIANPKLQATTENLIEECSML 1136

Query: 609  KISNNELRKQKMDLQEHCAILEVEVRDTLELFSGILNEVENLEASFRRMLKEVSSKEKST 668
            + +N ELRKQKM+L EHCA+LE E++++ ++FS ++NEVE LE  +  ML+E++SKEK+ 
Sbjct: 1137 QKANGELRKQKMELHEHCAVLEAELKESEKVFSNMVNEVEALEEKYSMMLEEIASKEKAL 1196

Query: 669  NKELDALVREIHKHNANVARDDSLLNQMYLEKTAEVDNLERKVMHLMKQMSTTFD---ET 728
            N EL+ L++E  K    +  ++SLLNQ YLEKT EVDNL+R+V HL +Q+S T D   +T
Sbjct: 1197 NLELEVLLQENKKQKEKLVLEESLLNQRYLEKTVEVDNLQREVAHLTEQISATQDVKEKT 1256

Query: 729  EGEVVLELSCLRADKAMLEAALQEAQGKLKLYESKIDHIHKEAERKVMGVISELEVSKQN 788
              E VLE+S LRADKAMLEAALQ+AQGKLKL ESK++ +  E E ++ G+  EL  +KQ 
Sbjct: 1257 ASEAVLEVSHLRADKAMLEAALQDAQGKLKLSESKLNAMQVECETELQGLKEELAAAKQK 1316

Query: 789  QEILMDYHRKVLSSLENVKNSESKSKNMLRRHEFKLKSSESDRQNLAEEVSTLKIR---- 848
            QEILM  H K+L  LE+VK++E K K  +R  E KLK+SE   Q L EE+S+LK++    
Sbjct: 1317 QEILMADHEKLLDLLEDVKSNEDKLKGTVRGLELKLKASEYQNQQLVEEISSLKVQLQKT 1376

Query: 849  --LQDEVLAVKKSLIESEHQNKCLKVSFEMLSEDYEKLKGKNVMYLEEISDMQKVLTELG 906
              LQDE+LA+KK++ E++ +N+ L+ SF+MLS DYE+LK +  +++++IS+ Q+ +++L 
Sbjct: 1377 ALLQDEILALKKTISETKFENERLEASFQMLSRDYEELKVERTLFVQKISNSQEAVSDLE 1436

The following BLAST results are available for this feature:

BLAST of Lsi08G006750 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Lsi08G006750 vs. TrEMBL


Match Name	E-value	Identity	Description
B9T762_RICCO	2.3e-124	35.25	DNA repair protein RAD50, putative OS=Ricinus communis GN=RCOM_0272710 PE=4 SV=1	[more]
A0A061FQD1_THECC	1.8e-121	36.35	F-box and Leucine Rich Repeat domains containing protein, putative isoform 2 (Fr...	[more]
A0A061FPQ8_THECC	1.8e-121	36.35	F-box and Leucine Rich Repeat domains containing protein, putative isoform 3 (Fr...	[more]
A0A061FP79_THECC	1.8e-121	36.35	F-box and Leucine Rich Repeat domains containing protein, putative isoform 1 OS=...	[more]
A0A0D2RRU7_GOSRA	4.5e-120	37.69	Uncharacterized protein OS=Gossypium raimondii GN=B456_011G233700 PE=4 SV=1	[more]

BLAST of Lsi08G006750 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of Lsi08G006750 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|296085937\|emb\|CBI31378.3\|	2.1e-126	36.16	unnamed protein product [Vitis vinifera]	[more]
gi\|223525882\|gb\|EEF28304.1\|	3.3e-124	35.25	DNA repair protein RAD50, putative [Ricinus communis]	[more]
gi\|590565896\|ref\|XP_007010077.1\|	2.6e-121	36.35	F-box and Leucine Rich Repeat domains containing protein, putative isoform 2, pa...	[more]
gi\|590565893\|ref\|XP_007010076.1\|	2.6e-121	36.35	F-box and Leucine Rich Repeat domains containing protein, putative isoform 1 [Th...	[more]
gi\|590565899\|ref\|XP_007010078.1\|	2.6e-121	36.35	F-box and Leucine Rich Repeat domains containing protein, putative isoform 3, pa...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi08G006750.1	Lsi08G006750.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	unknown	Coil	Coil	coord: 604..624 score: -coord: 760..787 score: -coord: 679..713 score: -coord: 442..469 score: -coord: 837..857 score: -coord: 643..663 score: -coord: 6..33 score: -coord: 384..411 score: -coord: 513..550 score: -coord: 558..578 score: -coord: 211..238 score: -coord: 875..909 score: -coord: 41..64 scor
None	No IPR available	PANTHER	PTHR13140	MYOSIN	coord: 139..230 score: 1.3E-30coord: 639..699 score: 1.3E-30coord: 1..114 score: 1.3E-30coord: 354..620 score: 1.3E-30coord: 889..912 score: 1.3
None	No IPR available	PANTHER	PTHR13140:SF480	SUBFAMILY NOT NAMED	coord: 889..912 score: 1.3E-30coord: 139..230 score: 1.3E-30coord: 639..699 score: 1.3E-30coord: 1..114 score: 1.3E-30coord: 354..620 score: 1.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi08G006750	Cla017760	Watermelon (97103) v1	lsiwmB464
Lsi08G006750	Cla013727	Watermelon (97103) v1	lsiwmB475
Lsi08G006750	MELO3C009401	Melon (DHL92) v3.5.1	lsimeB483
Lsi08G006750	ClCG08G007930	Watermelon (Charleston Gray)	lsiwcgB443
Lsi08G006750	Cla97C08G150690	Watermelon (97103) v2	lsiwmbB448
Lsi08G006750	Cla97C10G202800	Watermelon (97103) v2	lsiwmbB426
Lsi08G006750	Bhi04G001043	Wax gourd	lsiwgoB594
Lsi08G006750	Carg04593	Silver-seed gourd	carlsiB628

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Lsi08G006750	Lsi03G019680	Bottle gourd (USVL1VR-Ls)	lsilsiB134

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi08G006750	Wax gourd	lsiwgoB618
Lsi08G006750	Bottle gourd (USVL1VR-Ls)	lsilsiB152
Lsi08G006750	Cucumber (Gy14) v1	cgylsiB269
Lsi08G006750	Cucumber (Gy14) v1	cgylsiB498
Lsi08G006750	Cucurbita maxima (Rimu)	cmalsiB293
Lsi08G006750	Cucurbita maxima (Rimu)	cmalsiB703
Lsi08G006750	Cucurbita maxima (Rimu)	cmalsiB706
Lsi08G006750	Cucurbita moschata (Rifu)	cmolsiB281
Lsi08G006750	Cucurbita moschata (Rifu)	cmolsiB697
Lsi08G006750	Cucurbita moschata (Rifu)	cmolsiB700
Lsi08G006750	Cucurbita pepo (Zucchini)	cpelsiB161
Lsi08G006750	Cucurbita pepo (Zucchini)	cpelsiB382
Lsi08G006750	Cucurbita pepo (Zucchini)	cpelsiB384
Lsi08G006750	Wild cucumber (PI 183967)	cpilsiB144
Lsi08G006750	Wild cucumber (PI 183967)	cpilsiB393
Lsi08G006750	Cucumber (Chinese Long) v2	culsiB145
Lsi08G006750	Cucumber (Chinese Long) v2	culsiB389
Lsi08G006750	Melon (DHL92) v3.5.1	lsimeB463
Lsi08G006750	Melon (DHL92) v3.5.1	lsimeB470
Lsi08G006750	Watermelon (Charleston Gray)	lsiwcgB435
Lsi08G006750	Watermelon (97103) v1	lsiwmB485
Lsi08G006750	Cucumber (Gy14) v2	cgyblsiB132
Lsi08G006750	Cucumber (Gy14) v2	cgyblsiB354
Lsi08G006750	Melon (DHL92) v3.6.1	lsimedB482
Lsi08G006750	Melon (DHL92) v3.6.1	lsimedB490
Lsi08G006750	Silver-seed gourd	carlsiB243
Lsi08G006750	Silver-seed gourd	carlsiB769
Lsi08G006750	Cucumber (Chinese Long) v3	cuclsiB157
Lsi08G006750	Cucumber (Chinese Long) v3	cuclsiB412
Lsi08G006750	Watermelon (97103) v2	lsiwmbB439