Carg04593 (gene) Silver-seed gourd

NameCarg04593
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionUnknown protein
LocationCucurbita_argyrosperma_scaffold_032 : 1325214 .. 1326903 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCATCTTTGGATTACAAAAGCGACGTTTGTCGTATCGAACGTTGCGAAAATGAACGACTCGATGCTGAAGAACAAGCTGAGGTTATCTTCAACAAGTTTATCCAGCTCAAGGATTTGTTTGAAGCATGTTTTACTACAGGAGTTGAGAGGCAGCTGCATATGGAATTCAGATATAATGACTCGAACGCCGTTATCGACAGCTTACGACACAAAAACATGCTGAAGGGCAGGGAGAACAAAGGCTTGAAGCATTGTGCTAGTGAGACGTGTTTTAAAAACCTTAAGGGGAAACTTGAAAGGGAAACCCAAAGAGGACAATATCTGCTAGTGGTGGGTTTTGACGATTACAAATAGTATCAGAGCCAGGCACCCCGCAATGTGCTAATGAGGAAGCTGAGCCCCGAAGGGATGGACATAAGGTGGTGTGCCGGTAAGAACGCTAGGCCCCGAAGGGGAAAGGAATGAGTGCCAGCGAGGACGCTGAGCTCCTAAGGGGGTGGATTGTGAAATTCCATATCGGTTGGAGGGGGGAACGAAACATTCCTTATAAGCCACACTCCCTAGAAGACGTGTTTTAAGAACCTTGAGCGAAAGCTCGTAAGGAAAAACCCAACGAGGACAATATATGCTAGCGGTGTGCTTGAGCTGTTACAAATGGTATCAGAGCCAGACACCAGGCGATATGCCAGTGAGGAGGCTGAGTCCCGAAGGGGATGGACATGAGGTGGTGTGCCAGTAAGGACGCTGGGCCCCGAAGAGGGGTAGATTGTAAAATTCCATATCGGTTAGAGAGGAAAACAAAACATTATTTATAAGGACGTGAGGTAAATAAGACGGGAAAGTAAAAGTGCTTAGAGGAGGAGAAAGGAGTATTTCAAGAGAGTTCAAGTGCTTGAAAACCCGTTTCGGTAATGTTTCCGTTTTTCACTTCTGGTTTCTCGTTGACTCGGGGATAAACTGGGCTAACCAATCAAGTAGGTCTTGTAATAACTTGATCGAGGCCTATATTACGTGAGGATAAATTGGCTAAAGAATCAAGTGGCTCTCGTACCAACGTGATCAAGGGCTATATTACAAAAGGGTAGAAAAAGAACGTGTCAAGGTAGAAACGTGAATCAAATTTAGTAAACACGAACATTTTAAGTTACGAAATTTATCTCTAAATTTTTAGAGAGTGGCGTATCATAAATATAAGAATTTCTTATATTACTATAATGGAATAAATCTAAAGAAAACCCACAAAATTTAACCATTTAAAATTTTATCGTTTTTTTTTTTTTAAATCTGTCAATTTAAATATGCCTAAAAAAATGTATTTGTTAACATTTTTTTAATAATAAATTTCTAAAAAAAAATTTATATATTTTTAATTATATGAAATTTTGAATATATATATATATATATATATATATTTTTTTAAAAAAATTAAAGTTTATAATAAAAATAGATATTTCTCTAGTTTGACCTTTACGATGGTCCGCTCCGTATACGCATACGTCTCTTTCTCTGAATCAGATCGGACGGCGTAGTTTTTGTTTTTTGGTCGATCTATTTCACCGCCATCTCCGCATCGTTGTCGTCGATCGTTTTTGCAAATCTCCGTGGCGATAACACTCTTACATCTTCGCCGGTTGCAGTAATTCACCGGCAATCATCCTTGGGTACTCCAATTTCTTCTTCTTTCTAG

mRNA sequence

ATGGCATCTTTGGATTACAAAAGCGACGTTTGTCGTATCGAACGTTGCGAAAATGAACGACTCGATGCTGAAGAACAAGCTGAGGTTATCTTCAACAAGTTTATCCAGCTCAAGGATTTGTTTGAAGCATGTTTTACTACAGGAGTTGAGAGGCAGCTGCATATGGAATTCAGATATAATGACTCGAACGCCGTTATCGACAGCTTACGACACAAAAACATGCTGAAGGGCAGGGAGAACAAAGGCTTGAAGCATTGTGCTATATCAGAGCCAGGCACCCCGCAATGTGCTAATGAGGAAGCTGAGCCCCGAAGGGATGGACATAAGAGCCAGACACCAGGCGATATGCCAGTGAGGAGGCTGAGTCCCGAAGGGGATGGACATGAGGTGGTGTGCCAATCGGACGGCGTAGTTTTTGTTTTTTGGTCGATCTATTTCACCGCCATCTCCGCATCGTTGTCGTCGATCGTTTTTGCAAATCTCCGTGGCGATAACACTCTTACATCTTCGCCGGTTGCAGTAATTCACCGGCAATCATCCTTGGGTACTCCAATTTCTTCTTCTTTCTAG

Coding sequence (CDS)

ATGGCATCTTTGGATTACAAAAGCGACGTTTGTCGTATCGAACGTTGCGAAAATGAACGACTCGATGCTGAAGAACAAGCTGAGGTTATCTTCAACAAGTTTATCCAGCTCAAGGATTTGTTTGAAGCATGTTTTACTACAGGAGTTGAGAGGCAGCTGCATATGGAATTCAGATATAATGACTCGAACGCCGTTATCGACAGCTTACGACACAAAAACATGCTGAAGGGCAGGGAGAACAAAGGCTTGAAGCATTGTGCTATATCAGAGCCAGGCACCCCGCAATGTGCTAATGAGGAAGCTGAGCCCCGAAGGGATGGACATAAGAGCCAGACACCAGGCGATATGCCAGTGAGGAGGCTGAGTCCCGAAGGGGATGGACATGAGGTGGTGTGCCAATCGGACGGCGTAGTTTTTGTTTTTTGGTCGATCTATTTCACCGCCATCTCCGCATCGTTGTCGTCGATCGTTTTTGCAAATCTCCGTGGCGATAACACTCTTACATCTTCGCCGGTTGCAGTAATTCACCGGCAATCATCCTTGGGTACTCCAATTTCTTCTTCTTTCTAG

Protein sequence

MASLDYKSDVCRIERCENERLDAEEQAEVIFNKFIQLKDLFEACFTTGVERQLHMEFRYNDSNAVIDSLRHKNMLKGRENKGLKHCAISEPGTPQCANEEAEPRRDGHKSQTPGDMPVRRLSPEGDGHEVVCQSDGVVFVFWSIYFTAISASLSSIVFANLRGDNTLTSSPVAVIHRQSSLGTPISSSF
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg04593-RACarg04593-RAmRNA


Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 13..33
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 87..125
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 99..113

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Carg04593Cucumber (Gy14) v1carcgyB0765
Carg04593Silver-seed gourdcarcarB307
Carg04593Silver-seed gourdcarcarB577
Carg04593Silver-seed gourdcarcarB578
Carg04593Cucumber (Gy14) v2carcgybB0682
Carg04593Cucumber (Gy14) v2carcgybB0687
Carg04593Cucumber (Gy14) v1carcgyB0769
Carg04593Cucurbita maxima (Rimu)carcmaB0962
Carg04593Cucurbita maxima (Rimu)carcmaB0961
Carg04593Cucurbita maxima (Rimu)carcmaB0964
Carg04593Cucurbita maxima (Rimu)carcmaB0966
Carg04593Cucurbita maxima (Rimu)carcmaB0967
Carg04593Cucurbita maxima (Rimu)carcmaB0968
Carg04593Cucurbita moschata (Rifu)carcmoB0938
Carg04593Cucurbita moschata (Rifu)carcmoB0936
Carg04593Cucurbita moschata (Rifu)carcmoB0937
Carg04593Cucurbita moschata (Rifu)carcmoB0939
Carg04593Cucurbita moschata (Rifu)carcmoB0940
Carg04593Cucurbita moschata (Rifu)carcmoB0941
Carg04593Cucurbita pepo (Zucchini)carcpeB0958
Carg04593Cucurbita pepo (Zucchini)carcpeB0960
Carg04593Cucurbita pepo (Zucchini)carcpeB0962
Carg04593Cucurbita pepo (Zucchini)carcpeB0963
Carg04593Cucurbita pepo (Zucchini)carcpeB0965
Carg04593Cucurbita pepo (Zucchini)carcpeB0966
Carg04593Wild cucumber (PI 183967)carcpiB0718
Carg04593Wild cucumber (PI 183967)carcpiB0723
Carg04593Cucumber (Chinese Long) v2carcuB0703
Carg04593Cucumber (Chinese Long) v2carcuB0709
Carg04593Cucumber (Chinese Long) v3carcucB0721
Carg04593Cucumber (Chinese Long) v3carcucB0726
Carg04593Bottle gourd (USVL1VR-Ls)carlsiB627
Carg04593Melon (DHL92) v3.5.1carmeB0684
Carg04593Melon (DHL92) v3.5.1carmeB0686
Carg04593Melon (DHL92) v3.6.1carmedB0696
Carg04593Melon (DHL92) v3.6.1carmedB0698
Carg04593Watermelon (Charleston Gray)carwcgB0661
Carg04593Watermelon (97103) v1carwmB0683
Carg04593Watermelon (97103) v2carwmbB0711
Carg04593Wax gourdcarwgoB0809