Lsi08G004580 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi08G004580
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionChloroplast thylakoid processing peptidase
Locationchr08 : 12240350 .. 12247638 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AGAACATTCTCACAATTAAATGTGTTGATGAACAGATTCACTGTAGCAACTGAATTTTTCTCTGCTCCTCACTTTCCTAGAAACTTACAGGCGAAGTCACATCCTCTTTCTCTTCGGCTTTCTCCGATTTCAATCCAAATCCATTGGAGCTCGATTCTCCAGTTCCTCTACAGATTTCTTTTCTTTTCTTCTCTTTTCGTTCCTATCCTTCAAGAATTTCTGCGATTTCAGAAATGAGCTGTTTGAAGCCCTTTCTGTTGTATTCTTCGCTGCGATGGATGACTTGTCAGAGTTGGGGGTTTCCCAGATGGCCTGGATTTGACGGTTTGCTCAGATTTCATGTGGTTTTGATCTTATGGTCTATGCTTTTGGAGATTCATTTCATTCCGTCGTCATCAATGTATCCAACTCTTCGTGTCGGCGATCGAATTCTTGTCGAGAAGGTAAAGTTTGTTGAGTTTTGGATTTATCTATAAAATTATGAGCTGAATTTTGAATTTCAGAGTTCGAGTAGGTTTAGGCGTAATTTTTGTGCATGTGAGAATGGTCGTAGAAAAATTGATGTGGATTGAGATTTTAGTGTGGTTATGATGAAGCTCGATCGATTCAATCGTCAAAATTATGCGTTCAGTTATTTTTTATTGTAAGGAAATAGATGAATCATGTGTATTGAAGTAGTAATTATGCATTATTTTACAAAAACGTTGATAATTTATTGCTAATAGCTATTATTTTGTAGAAGGAGAAAGAATCAAACATATAGAAAACAATATGAACATGAACAAGACAACGAAATGTGATCTTAGTAATTTAGATGTAGAGATTATTTTCGCCTTGATAAGCTTTACAAGACAAGTAGTTGCCTGTCATTTTTTGAACACTAAAACTCGTTTTGAATGGCTTGATCTAAGCTGAGGTAACATAGCTAGGTGAAAAAAGTAGAGGGACCTTGGTGGAATAAATTTAGACTCCATATTTGTCGATGTCCTATGAAATTTTGTAACGTCAAAAGGTTGTCGTATGAGATTAGTTGAGACACTCACAGATAACAAAAGAAAGAAAAAAGTTCGATACAAACCATTAATGTCATTTACCTTGACATTATAGCCTAACTCTAGTGACATTATAACCTTGAACTGTTTTGAAAATTTCCATGTGATCTCTGCTCAAACTAACTCTAGTGTCCTTATTGCATTTTCTTCAGGCCTCTTATTACATCAGAAATCCTTCTATAGATGACATTATAACCTTCCGAGACCCGACGCAGGTTAGTTAACGGATGACTAACCTGCATGTCTTTTACTTAAACAGTTTTTCTCTAACAGGATCCTGTTGGAATTATGGTGTGCTATAGCAATCTGGATGCAGAGAAGAGAACATCGTTGTAAAGAGAGTTGTTGCAAAAGCCGGAGACACGGTTGAGGTATGGAAGAGCCTTCTTATCATTATGTTATTGCTTGCAACTAAGCTGTTGAAAAGAACTAGTGATATGAACTGTCCAAGAATCAAATTATTATTTATATTTTATTTAATAATTTTTATGTAATTTTAGTATTTTCCAATCTTATCCTTTTTATGATATATTAAGTAGGGGTATTTTTGTCATTTTACTATGATCTATGATGTGCCATTAGGATTTTCATTGGGAGGTTATCTAAAACCTTGTCATTAGGTTGTTTCGACAGATTATTTTTTTTTAGTAAAAGAAACTTTTATCTGTTTCGACAGATTATGATGAATCAATTTTGCCCTTTGTGCTTTTTAAGTTTCTCCAGGTGAGCTTCTTGAATTTTGCAATTCATGTATTGAGTTGCATGCCAAGAACATTCATGTCGGATTGATCATTCTATCTTGTGGATTGTTTGAATATTGTGCAGAACTTGTTCTTGTCTCAAGAGCTTTGATCTTAAGGCAATCCATATCTAACCTAATCATGAATGAAATCATATTGATTTGTGGGTTTTAATGTTTGAGAATTAGGAGTTTTCATAGCAAAAGGATTCTTAATTCCAAGTCTGTGGGCTTTCGTATCAACTAGTTTTATGGGAGTGACCACCTTTTGTGAGCTAATAAATTAACATCATAGCTACACCTATCTGGTGACTCTAGTAGTAATGAATTAGGTTGGTTGGTCTATCTAAGGTCCAAGGGTTGCCTATACAGAAAATTGTTGTCTCTTAGAGCGTTGTGAGAGGGTTGAAGCCTCCCGGAAATTAATTTGGTGAGCTATGAACATAATTCCAGAAATGGGACTCCTCAATACTCCAGTTATGAAAGAAAATGTGAATTGGTAGTTTATATATAACTATTTTTCCTTTTTATTAGTTACAGACTGCTGCAAATGCCATATCAATTTGCAGCAGAAGAATTCTAGTGTTGAAGTTAAAGAAACTAACCATTTATGTGGATTTTATCCAACACCATCCAGGTTTGTCAGGGATGCCTCTATGTCAATGGAGTTGCTCAGGATGAAAGCTTCTTAGCGGAGCGGCCAACATACATCACAAAGTCAACTGTGAGTTTTGTTTCAAACTCTACTTTCATTTTCATGTTTCGTGCATCATCCTGCAATTTTCTATGACAGCAATACGACTTCTAAAGCACGTCCTTAGAAATTTTATAGTCAAATCGAAATGGAGAAGGTGATTTTATTGTGCAAGACGAACCCATATTCTTTACAAATTATCCTCAACTTGCCATTGATTTTTATCACAGATTGACATTTTGGTCAGTTGTTGGAATTAGACTTACTTGAATGTTTATCCCCCTTCGACTAAAATAACACTAGTTTCCTACAGAATGCGATTTGGAGTTTCTAGTTTGTAGTTAATTTCGGTTGTTTCAAACTCGCAGCAAGTTCCAAAAGGCCATGTTTACGTGTTGGGCGACAACCGCAACAACAGCTACGACTCCCATATTTGGTTAGCCTTACTAACTTCATGTTATATTATATGTATTTTTGCTGGTTGTTGGTTCTGATGTTGTATAGTTTGTCTGTTGATGCTCCAAAGAAAAAGACTATCTTATTTGAGTTTAACCAGAAAATTATTCATCTATCAGTGTCTATCACGGATAGACAGTGAATTTTGCTATATTTGAATTGTGTCATTGTCCTTGGAATTGGATGCTCATGCTCCCCAAGTTTCTCTATTTCTCTCTCTCTCATCAACATCATCTTCATTTTTCTTATAGTTTTTAGCATTTGAACAGGGGACCTCTGCCCATCAAAAACATCATTGGGAGATACCTCTGTTCTTGCCACAAACCAACAAACAAATGAGCTCAGGAAACATTATTCTGTTTGTATGTGACAATTCTTTTAGTTCCACATCCTCATCTAGGACTAGGACTAGGATTGTTTGACATGGATAGAAACAATTTTTTCATTATTATGTATGGTTCATAAATTTGTGTGTCAGCTATGATAGAAGTGAAGTTATTTTATTAATTATCTTTAACAACCATGCCCTTTGTTTGTTTGTTATTCTTTATCAATATACAAATTAAGGATGGATTTTGTCATTTGTGAATGGTTATTCTTTATAATAAAAATATATTGTTTCTTAGAATCTGTGCTGATTAATGACATATCACACTTTTAAACGAAACGTTATTATTATTGAAAATTTTCACAGATAAAAAAAAATATCGAAAATAGCAAAAAAAAATAAAAAATAATAATAATAATAATGAGGGAAACTATTTACATAAAATAGACTTCTATCAACATCTATAAGTGATAGACTACTTCTACCATTTCTATCACTAATAAATCCTGATAGACTTCTATCAGTGTCTATCATAACTATCTAAAAATTTATTATTTTACCACACATTAGCTCAATCATATAAAGAAATAATGTAAAATTAATGTATTTGCCACATCGTTAGTCAAATTAACAAGTAATATCACATCATATTTTCATTAATCAATTAACGGTCAATTGATCATAGAGACTTTTTAGAATCATTTTTATAACATTTGAGGCAAATTTGTTCCTTTTCAAAACTAGTTTGGTTTTTTAAAACATTTTTAAAAAGTTGGTAAAGTAGTGTTTATATGCGTATTTTTCAAAACTACAAAATAAAAAATAAAATAGTTATTAAAGAGAGTCTTACCAAGTTAAAATAGAGCTTAAGAACATTAAGCTATTTGTATGTGTCAAATTGCTTTGTCAAATAACAATACTCATTGTTTGGTTGTTATTATTATTATTATTATTAATACACAATTAAATCTTGATTATGTGAGTGATATCTCATAAAATATAAATATATTGATAACTATGATTAAAGTCATTAGTTCCGATCAAAGTGAACTTAATTCAATGGTAATTGACATGATCTTCCTCTTTAGAGATCGGAAGTTCGATCTCCTACCATCGTAATTGTTATACTTTAATGTTAAGGTTTGATTACTCAATTCAATAACTAATAATGTTGTTAACTAAGAGGGAAAAAATTGTAAGTGATTATAATTACCTTTAAAATATGGTATATTTTAGGGACATTAATAAATATAGTAATCAAGTTCAAAGTATTTGTAGATATAACGCAATACAAAATAATTTACAAATATAGTCAAATTTGGATTCAGGTCTTGGAATTTATTAGTGATAGACTATATCGGTGGTAGGAGTCAGATAAGAAAATTAACATAATATGAGATTTCGAACTTTAAAACAACTTTTGAAAATAGAAGATCTATGAAATTTGATAATTCAAAACAACTTTTAAAGATAGAAATTGATTGAGACACTAATTTGAATTATTTTTAAATTAAATCACAAAATTTATGACAAATTAACTGCATGGAAAGAGACACTCAATTGACGCATAAAATCTAAAAAGATATCAATAGAGCTCACATTATATATTTGATAAATTAATTACAGTCTAATTAATAAAGATGTTAGATTAATTACAATGTAACTAAAAGGCTGATGAAGGCATTTTAAGATTAACATAAAAGTGACTCACGTGCTATACACTAATTTTGTTATATTTTGAAATAATTTCGTGTTTTGCTATTTTTCTAAATGAAAGTGTAATGAATGCTAAATGACTGAATATCCCACTGTGTTTGTTTTTGCCCGAATATGGGAAAAGCCCGATTTGAAGAGCCCATTACGAACTAGCACTTCAACGTTTGCATTGGGCCAGTTGGAGCAGTTTACCCATAAATAATTGTATGAATGACAGAATTTAATGGTCGGTTTTGAAAAATAGCAAAAGATATTTGTTCCTGTAAAATTGAAGAGAAATAATATAATATTTTACTATTAAATCGGATTTACTAAATGACTAAAATATTCAAATCATAAATAACTATTTAAAATCTAATTAAAGATCAATTACTTTCCATTTCAAATTAAAACTAACTTTTAATACAAGATTGGATCAGTTAATTCAAATTATAAAACAACATAAGATTAGTAAATTTAAAGCTCAAATTGTACTATAAAATCTTTAATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTGTAAATTTGAGATTAATTAACGAAATTTGTCATTAACATTGCTCCATACATACACTTATTCATAAATTCAAAAAGTAGAAAATGATTTAACATTCTCCATCTATACACACCTCCGAATACTCTATATTGAAATTCATCTAAATTTCAAAACAAAATAGCAAAAAAGATAGTGTAAACTAAAAATTTGTAACAATTTAATCCAATTAAAAAAAACTTGCAATTAAGTGAATGTAAATAACTTATATTCGTGATCCATTAAAATTTTCAAGTAAACGGTATCATCTTTGAGAAAGAGATATATTATTTGTTGCTTAATAAATCTGTCACTACAGAAACCGACATTCTCATCCTTTGTATATCATCTTCCACAACGTATTTTCATAAACTCTCCACTGCCCAACCCTTTTAAAATCCTATAAATTCCCTCATCTCAAAACTGATTTTGCTCCATTTTCAATTTCTTCTTATTCTTCTTCTTAAATTTATTGAAGCTATTGACTCTAAGATCTTCAATTCCAGAACCGAGCTCATTGCCTCTAAGAATTTTACCTCATTTGTTGTCATCAAAGAACTCGACAATGCCTCAACGAACATGAATTTCTTTGTGGACCTAAACATTATAATATGGGTATGCAATAACTAG

mRNA sequence

AGAACATTCTCACAATTAAATGTGTTGATGAACAGATTCACTGTAGCAACTGAATTTTTCTCTGCTCCTCACTTTCCTAGAAACTTACAGGCGAAGTCACATCCTCTTTCTCTTCGGCTTTCTCCGATTTCAATCCAAATCCATTGGAGCTCGATTCTCCAGTTCCTCTACAGATTTCTTTTCTTTTCTTCTCTTTTCGTTCCTATCCTTCAAGAATTTCTGCGATTTCAGAAATGAGCTGTTTGAAGCCCTTTCTGTTGTATTCTTCGCTGCGATGGATGACTTGTCAGAGTTGGGGGTTTCCCAGATGGCCTGGATTTGACGGTTTGCTCAGATTTCATGTGGTTTTGATCTTATGGTCTATGCTTTTGGAGATTCATTTCATTCCGTCGTCATCAATGTATCCAACTCTTCGTGTCGGCGATCGAATTCTTGTCGAGAAGGCCTCTTATTACATCAGAAATCCTTCTATAGATGACATTATAACCTTCCGAGACCCGACGCAGCAATCTGGATGCAGAGAAGAGAACATCGTTGTAAAGAGAGTTGTTGCAAAAGCCGGAGACACGGTTGAGGTTTGTCAGGGATGCCTCTATGTCAATGGAGTTGCTCAGGATGAAAGCTTCTTAGCGGAGCGGCCAACATACATCACAAAGTCAACTCAAGTTCCAAAAGGCCATGTTTACGTGTTGGGCGACAACCGCAACAACAGCTACGACTCCCATATTTGAACCGAGCTCATTGCCTCTAAGAATTTTACCTCATTTGTTGTCATCAAAGAACTCGACAATGCCTCAACGAACATGAATTTCTTTGTGGACCTAAACATTATAATATGGGTATGCAATAACTAG

Coding sequence (CDS)

ATGAGCTGTTTGAAGCCCTTTCTGTTGTATTCTTCGCTGCGATGGATGACTTGTCAGAGTTGGGGGTTTCCCAGATGGCCTGGATTTGACGGTTTGCTCAGATTTCATGTGGTTTTGATCTTATGGTCTATGCTTTTGGAGATTCATTTCATTCCGTCGTCATCAATGTATCCAACTCTTCGTGTCGGCGATCGAATTCTTGTCGAGAAGGCCTCTTATTACATCAGAAATCCTTCTATAGATGACATTATAACCTTCCGAGACCCGACGCAGCAATCTGGATGCAGAGAAGAGAACATCGTTGTAAAGAGAGTTGTTGCAAAAGCCGGAGACACGGTTGAGGTTTGTCAGGGATGCCTCTATGTCAATGGAGTTGCTCAGGATGAAAGCTTCTTAGCGGAGCGGCCAACATACATCACAAAGTCAACTCAAGTTCCAAAAGGCCATGTTTACGTGTTGGGCGACAACCGCAACAACAGCTACGACTCCCATATTTGA

Protein sequence

MSCLKPFLLYSSLRWMTCQSWGFPRWPGFDGLLRFHVVLILWSMLLEIHFIPSSSMYPTLRVGDRILVEKASYYIRNPSIDDIITFRDPTQQSGCREENIVVKRVVAKAGDTVEVCQGCLYVNGVAQDESFLAERPTYITKSTQVPKGHVYVLGDNRNNSYDSHI
Homology
[Close]
BLAST of Lsi08G004580 vs. Swiss-Prot
Match: PLSP1_ARATH (Chloroplast processing peptidase OS=Arabidopsis thaliana GN=PLSP1 PE=2 SV=2)

HSP 1 Score: 133.7 bits (335), Expect = 1.9e-30
Identity = 69/151 (45.70%), Postives = 91/151 (60.26%), Query Frame = 1 

Query: 23  FPRWPGFDG------LLRFHVVLILWSMLLEIHFIPSSSMYPTLRVGDRILVEKASYYIR 82
           FP W  F         +   V L     + E  +IPS SMYPT  VGDR++ EK SYY R
Sbjct: 104 FPEWLDFTSDDAQTVFVAIAVSLAFRYFIAEPRYIPSLSMYPTFDVGDRLVAEKVSYYFR 163

Query: 83  NPSIDDIITFRDPT--QQSGCREENIVVKRVVAKAGDTVEVCQGCLYVNGVAQDESFLAE 142
            P  +DI+ F+ P   Q+ G  + ++ +KR+VAK GD VEV  G L VNGVA++E F+ E
Sbjct: 164 KPCANDIVIFKSPPVLQEVGYTDADVFIKRIVAKEGDLVEVHNGKLMVNGVARNEKFILE 223

Query: 143 RPTYITKSTQVPKGHVYVLGDNRNNSYDSHI 166
            P Y     +VP+  V+V+GDNRNNSYDSH+
Sbjct: 224 PPGYEMTPIRVPENSVFVMGDNRNNSYDSHV 254

[Close]
BLAST of Lsi08G004580 vs. Swiss-Prot
Match: TPP1_ARATH (Thylakoidal processing peptidase 1, chloroplastic OS=Arabidopsis thaliana GN=TPP1 PE=2 SV=2)

HSP 1 Score: 122.1 bits (305), Expect = 5.7e-27
Identity = 61/133 (45.86%), Postives = 84/133 (63.16%), Query Frame = 1 

Query: 37  VVLILWSMLLEIHFIPSSSMYPTLRVGDRILVEKASYYIRNPSIDDIITFRDPT-----Q 96
           V ++  S L E   IPS+SMYPTL  GDR++ EK SY+ R P + DI+ F+ P       
Sbjct: 166 VSILFRSALAEPKSIPSTSMYPTLDKGDRVMAEKVSYFFRKPEVSDIVIFKAPPILLEYP 225

Query: 97  QSGCREENIVVKRVVAKAGDTVEVCQGCLYVNGVAQDESFLAERPTYITKSTQVPKGHVY 156
           + G    ++ +KR+VA  GD VEV  G L+VN + Q+E F+ E  +Y  +   VPKG+V+
Sbjct: 226 EYGYSSNDVFIKRIVASEGDWVEVRDGKLFVNDIVQEEDFVLEPMSYEMEPMFVPKGYVF 285

Query: 157 VLGDNRNNSYDSH 165
           VLGDNRN S+DSH
Sbjct: 286 VLGDNRNKSFDSH 298

[Close]
BLAST of Lsi08G004580 vs. Swiss-Prot
Match: TPP2_ARATH (Probable thylakoidal processing peptidase 2, chloroplastic OS=Arabidopsis thaliana GN=TPP2 PE=2 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 4.9e-26
Identity = 62/130 (47.69%), Postives = 81/130 (62.31%), Query Frame = 1 

Query: 37  VVLILWSMLLEIHFIPSSSMYPTLRVGDRILVEKASYYIRNPSIDDIITFRDPT--QQSG 96
           V L+  S L E   IPS+SM PTL VGDR++ EK SY+ R P + DI+ F+ P    + G
Sbjct: 196 VSLLFRSALAEPKSIPSTSMLPTLDVGDRVIAEKVSYFFRKPEVSDIVIFKAPPILVEHG 255

Query: 97  CREENIVVKRVVAKAGDTVEVCQGCLYVNGVAQDESFLAERPTYITKSTQVPKGHVYVLG 156
               ++ +KR+VA  GD VEVC G L VN   Q E F+ E   Y  +   VP+G+V+VLG
Sbjct: 256 YSCADVFIKRIVASEGDWVEVCDGKLLVNDTVQAEDFVLEPIDYEMEPMFVPEGYVFVLG 315

Query: 157 DNRNNSYDSH 165
           DNRN S+DSH
Sbjct: 316 DNRNKSFDSH 325

[Close]
BLAST of Lsi08G004580 vs. Swiss-Prot
Match: LEP1_SYNY3 (Probable signal peptidase I-1 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=lepB1 PE=3 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 1.0e-23
Identity = 58/131 (44.27%), Postives = 77/131 (58.78%), Query Frame = 1 

Query: 37  VVLILWSMLLEIHFIPSSSMYPTLRVGDRILVEKASYYIRNPSIDDIITFRDPT--QQSG 96
           + L+L   + E  +IPS SM PTL  GDR++VEK SY+   P + DII F  P   Q  G
Sbjct: 26  LALLLRFFVAEPRYIPSDSMLPTLEQGDRLVVEKVSYHFHPPQVGDIIVFHPPELLQVQG 85

Query: 97  CREENIVVKRVVAKAGDTVEVCQGCLYVNGVAQDESFLAERPTYITKSTQVPKGHVYVLG 156
                  +KRV+A  G TVEV  G +Y +G    E ++ E P Y   + +VP G V+V+G
Sbjct: 86  YDLGQAFIKRVIALPGQTVEVNNGIVYRDGQPLQEEYILEPPQYNLPAVRVPDGQVFVMG 145

Query: 157 DNRNNSYDSHI 166
           DNRNNS DSH+
Sbjct: 146 DNRNNSNDSHV 156

[Close]
BLAST of Lsi08G004580 vs. Swiss-Prot
Match: LEP2_SYNY3 (Probable signal peptidase I-2 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=lepB2 PE=3 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 5.0e-23
Identity = 52/122 (42.62%), Postives = 73/122 (59.84%), Query Frame = 1 

Query: 43  SMLLEIHFIPSSSMYPTLRVGDRILVEKASYYIRNPSIDDIITFRDPTQQSGCREENIVV 102
           + + E  +IPSSSM PTL++ DR+++EK SY +R+P   +I+ F            +  +
Sbjct: 40  TFVAEARYIPSSSMEPTLQINDRLIIEKISYRLRDPERGEIVVFNPTDALKAKNFHDAFI 99

Query: 103 KRVVAKAGDTVEVCQGCLYVNGVAQDESFLAERPTYITKSTQVPKGHVYVLGDNRNNSYD 162
           KR++   GD V V QG +YVNG   DE+++A  P Y     +VP     VLGDNRNNSYD
Sbjct: 100 KRIIGLPGDEVRVSQGNVYVNGKMLDENYIAAPPAYEYGPVKVPDDQYLVLGDNRNNSYD 159

Query: 163 SH 165
           SH
Sbjct: 160 SH 161

[Close]
BLAST of Lsi08G004580 vs. TrEMBL
Match: A0A0A0KIU5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G382350 PE=4 SV=1)

HSP 1 Score: 295.0 bits (754), Expect = 5.5e-77
Identity = 142/165 (86.06%), Postives = 149/165 (90.30%), Query Frame = 1 

Query: 1   MSCLKPFLLYSSLRWMTCQSWGFPRWPGFDGLLRFHVVLILWSMLLEIHFIPSSSMYPTL 60
           M+ L+PFL YSSLRWMT  SWGFPRWP FD  LRF V+LILWSMLLEIH IPSSSMYPTL
Sbjct: 1   MTFLRPFLFYSSLRWMTFHSWGFPRWPSFDAFLRFLVLLILWSMLLEIHSIPSSSMYPTL 60

Query: 61  RVGDRILVEKASYYIRNPSIDDIITFRDPTQQSGCREENIVVKRVVAKAGDTVEVCQGCL 120
           RVGDRILVE ASY IRNPSI+DIITFRDPTQQS  REENIVVKRVVAKAGDTVEVCQGCL
Sbjct: 61  RVGDRILVETASYLIRNPSINDIITFRDPTQQSALREENIVVKRVVAKAGDTVEVCQGCL 120

Query: 121 YVNGVAQDESFLAERPTYITKSTQVPKGHVYVLGDNRNNSYDSHI 166
           YVNGVA+DESFL ERP Y TKSTQ+P+GHVYVLGDNRNNSYDSHI
Sbjct: 121 YVNGVAKDESFLLERPMYTTKSTQIPEGHVYVLGDNRNNSYDSHI 165

[Close]
BLAST of Lsi08G004580 vs. TrEMBL
Match: I1KAD4_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_06G116300 PE=4 SV=1)

HSP 1 Score: 240.4 bits (612), Expect = 1.6e-60
Identity = 113/171 (66.08%), Postives = 133/171 (77.78%), Query Frame = 1 

Query: 1   MSCLKPFLLYS------SLRWMTCQSWGFPRWPGFDGLLRFHVVLILWSMLLEIHFIPSS 60
           MS L+P  LY+      +LRW+ CQSWGF RWPG DG  R  VV++LWS L E+ FIPSS
Sbjct: 1   MSFLRPSALYNFLISYPALRWLPCQSWGFLRWPGLDGFFRLFVVVLLWSTLSELRFIPSS 60

Query: 61  SMYPTLRVGDRILVEKASYYIRNPSIDDIITFRDPTQQSGCREENIVVKRVVAKAGDTVE 120
           SMYPTLRVGDRI+VEKASYYIR+P+I DI+TF+DPTQ SG   + + +KR+VAKAGDTVE
Sbjct: 61  SMYPTLRVGDRIIVEKASYYIRSPAIHDIVTFKDPTQSSGENTDAVFIKRIVAKAGDTVE 120

Query: 121 VCQGCLYVNGVAQDESFLAERPTYITKSTQVPKGHVYVLGDNRNNSYDSHI 166
           V  G LY+NGVAQ E F+AE P Y  + T VP GHVYVLGDNRNNSYDSH+
Sbjct: 121 VNHGALYINGVAQQEDFIAEPPAYAMQLTHVPNGHVYVLGDNRNNSYDSHV 171

[Close]
BLAST of Lsi08G004580 vs. TrEMBL
Match: A0A0B2SJV2_GLYSO (Chloroplast processing peptidase OS=Glycine soja GN=glysoja_018363 PE=4 SV=1)

HSP 1 Score: 240.4 bits (612), Expect = 1.6e-60
Identity = 113/171 (66.08%), Postives = 133/171 (77.78%), Query Frame = 1 

Query: 1   MSCLKPFLLYS------SLRWMTCQSWGFPRWPGFDGLLRFHVVLILWSMLLEIHFIPSS 60
           MS L+P  LY+      +LRW+ CQSWGF RWPG DG  R  VV++LWS L E+ FIPSS
Sbjct: 1   MSFLRPSALYNFLISYPALRWLPCQSWGFLRWPGLDGFFRLFVVVLLWSTLSELRFIPSS 60

Query: 61  SMYPTLRVGDRILVEKASYYIRNPSIDDIITFRDPTQQSGCREENIVVKRVVAKAGDTVE 120
           SMYPTLRVGDRI+VEKASYYIR+P+I DI+TF+DPTQ SG   + + +KR+VAKAGDTVE
Sbjct: 61  SMYPTLRVGDRIIVEKASYYIRSPAIHDIVTFKDPTQSSGENTDAVFIKRIVAKAGDTVE 120

Query: 121 VCQGCLYVNGVAQDESFLAERPTYITKSTQVPKGHVYVLGDNRNNSYDSHI 166
           V  G LY+NGVAQ E F+AE P Y  + T VP GHVYVLGDNRNNSYDSH+
Sbjct: 121 VNHGALYINGVAQQEDFIAEPPAYAMQLTHVPNGHVYVLGDNRNNSYDSHV 171

[Close]
BLAST of Lsi08G004580 vs. TrEMBL
Match: A0A072V0L3_MEDTR (Signal peptidase I family protein OS=Medicago truncatula GN=MTR_3g088435 PE=4 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 3.6e-60
Identity = 117/171 (68.42%), Postives = 132/171 (77.19%), Query Frame = 1 

Query: 1   MSCLKPFLLYSSL------RWMTCQSWGFPRWPGFDGLLRFHVVLILWSMLLEIHFIPSS 60
           MS L+P  +Y+ L      RWM CQSWGF RWPG +G LR  VV +LWS    + +IPSS
Sbjct: 1   MSFLRPSAMYNFLITYPSSRWMPCQSWGFLRWPGLEGFLRLLVVFLLWSTFSHLCYIPSS 60

Query: 61  SMYPTLRVGDRILVEKASYYIRNPSIDDIITFRDPTQQSGCREENIVVKRVVAKAGDTVE 120
           SMYPTL VGDRI++EKASYYIR+PSI DIITFRDPTQ SG   + I +KRVVAK GDTVE
Sbjct: 61  SMYPTLHVGDRIIIEKASYYIRSPSIHDIITFRDPTQHSGDNTDVIFIKRVVAKEGDTVE 120

Query: 121 VCQGCLYVNGVAQDESFLAERPTYITKSTQVPKGHVYVLGDNRNNSYDSHI 166
           V  G LYVNGVAQ+E F+ E+PTY TK T VPKGHVYVLGDNRNNSYDSHI
Sbjct: 121 VHHGGLYVNGVAQEEDFVVEKPTYTTKLTYVPKGHVYVLGDNRNNSYDSHI 171

[Close]
BLAST of Lsi08G004580 vs. TrEMBL
Match: C6SY30_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 3.6e-60
Identity = 112/171 (65.50%), Postives = 133/171 (77.78%), Query Frame = 1 

Query: 1   MSCLKPFLLYS------SLRWMTCQSWGFPRWPGFDGLLRFHVVLILWSMLLEIHFIPSS 60
           MS L+P  LY+      +LRW++CQSWGF RWPG DG  R  VV++LWS L E+ FIPSS
Sbjct: 1   MSFLRPSALYNFLISYPALRWLSCQSWGFLRWPGLDGFFRLFVVVLLWSTLSELRFIPSS 60

Query: 61  SMYPTLRVGDRILVEKASYYIRNPSIDDIITFRDPTQQSGCREENIVVKRVVAKAGDTVE 120
           SMYPTLRVGDRI+VEKASYYIR+P+I DI+TF+DPTQ SG   + + +KR+VAKAGDTVE
Sbjct: 61  SMYPTLRVGDRIIVEKASYYIRSPAIHDIVTFKDPTQSSGENTDAVFIKRIVAKAGDTVE 120

Query: 121 VCQGCLYVNGVAQDESFLAERPTYITKSTQVPKGHVYVLGDNRNNSYDSHI 166
           V  G LY+NGVAQ E F+AE P Y  +   VP GHVYVLGDNRNNSYDSH+
Sbjct: 121 VNHGALYINGVAQQEDFIAEPPAYAMQLAHVPNGHVYVLGDNRNNSYDSHV 171

[Close]
BLAST of Lsi08G004580 vs. TAIR10
Match: AT3G24590.1 (AT3G24590.1 plastidic type i signal peptidase 1)

HSP 1 Score: 133.7 bits (335), Expect = 1.1e-31
Identity = 69/151 (45.70%), Postives = 91/151 (60.26%), Query Frame = 1 

Query: 23  FPRWPGFDG------LLRFHVVLILWSMLLEIHFIPSSSMYPTLRVGDRILVEKASYYIR 82
           FP W  F         +   V L     + E  +IPS SMYPT  VGDR++ EK SYY R
Sbjct: 104 FPEWLDFTSDDAQTVFVAIAVSLAFRYFIAEPRYIPSLSMYPTFDVGDRLVAEKVSYYFR 163

Query: 83  NPSIDDIITFRDPT--QQSGCREENIVVKRVVAKAGDTVEVCQGCLYVNGVAQDESFLAE 142
            P  +DI+ F+ P   Q+ G  + ++ +KR+VAK GD VEV  G L VNGVA++E F+ E
Sbjct: 164 KPCANDIVIFKSPPVLQEVGYTDADVFIKRIVAKEGDLVEVHNGKLMVNGVARNEKFILE 223

Query: 143 RPTYITKSTQVPKGHVYVLGDNRNNSYDSHI 166
            P Y     +VP+  V+V+GDNRNNSYDSH+
Sbjct: 224 PPGYEMTPIRVPENSVFVMGDNRNNSYDSHV 254

[Close]
BLAST of Lsi08G004580 vs. TAIR10
Match: AT2G30440.1 (AT2G30440.1 thylakoid processing peptide)

HSP 1 Score: 122.1 bits (305), Expect = 3.2e-28
Identity = 61/133 (45.86%), Postives = 84/133 (63.16%), Query Frame = 1 

Query: 37  VVLILWSMLLEIHFIPSSSMYPTLRVGDRILVEKASYYIRNPSIDDIITFRDPT-----Q 96
           V ++  S L E   IPS+SMYPTL  GDR++ EK SY+ R P + DI+ F+ P       
Sbjct: 166 VSILFRSALAEPKSIPSTSMYPTLDKGDRVMAEKVSYFFRKPEVSDIVIFKAPPILLEYP 225

Query: 97  QSGCREENIVVKRVVAKAGDTVEVCQGCLYVNGVAQDESFLAERPTYITKSTQVPKGHVY 156
           + G    ++ +KR+VA  GD VEV  G L+VN + Q+E F+ E  +Y  +   VPKG+V+
Sbjct: 226 EYGYSSNDVFIKRIVASEGDWVEVRDGKLFVNDIVQEEDFVLEPMSYEMEPMFVPKGYVF 285

Query: 157 VLGDNRNNSYDSH 165
           VLGDNRN S+DSH
Sbjct: 286 VLGDNRNKSFDSH 298

[Close]
BLAST of Lsi08G004580 vs. TAIR10
Match: AT1G06870.1 (AT1G06870.1 Peptidase S24/S26A/S26B/S26C family protein)

HSP 1 Score: 119.0 bits (297), Expect = 2.7e-27
Identity = 62/130 (47.69%), Postives = 81/130 (62.31%), Query Frame = 1 

Query: 37  VVLILWSMLLEIHFIPSSSMYPTLRVGDRILVEKASYYIRNPSIDDIITFRDPT--QQSG 96
           V L+  S L E   IPS+SM PTL VGDR++ EK SY+ R P + DI+ F+ P    + G
Sbjct: 196 VSLLFRSALAEPKSIPSTSMLPTLDVGDRVIAEKVSYFFRKPEVSDIVIFKAPPILVEHG 255

Query: 97  CREENIVVKRVVAKAGDTVEVCQGCLYVNGVAQDESFLAERPTYITKSTQVPKGHVYVLG 156
               ++ +KR+VA  GD VEVC G L VN   Q E F+ E   Y  +   VP+G+V+VLG
Sbjct: 256 YSCADVFIKRIVASEGDWVEVCDGKLLVNDTVQAEDFVLEPIDYEMEPMFVPEGYVFVLG 315

Query: 157 DNRNNSYDSH 165
           DNRN S+DSH
Sbjct: 316 DNRNKSFDSH 325

[Close]
BLAST of Lsi08G004580 vs. NCBI nr
Match: gi|659133491|ref|XP_008466751.1| (PREDICTED: chloroplast processing peptidase-like [Cucumis melo])

HSP 1 Score: 305.8 bits (782), Expect = 4.5e-80
Identity = 145/165 (87.88%), Postives = 154/165 (93.33%), Query Frame = 1 

Query: 1   MSCLKPFLLYSSLRWMTCQSWGFPRWPGFDGLLRFHVVLILWSMLLEIHFIPSSSMYPTL 60
           MS L+PFL YSSLRWM   SWGFPRWPGFDG LRF V+LILWSMLLEIH IPSSSMYPTL
Sbjct: 1   MSFLRPFLFYSSLRWMIFHSWGFPRWPGFDGFLRFIVLLILWSMLLEIHSIPSSSMYPTL 60

Query: 61  RVGDRILVEKASYYIRNPSIDDIITFRDPTQQSGCREENIVVKRVVAKAGDTVEVCQGCL 120
           RVGDRILVEKASY+IRNPSI+DIITF+DPTQQSGCREENIVVKRVVAKAGDTVEV QGCL
Sbjct: 61  RVGDRILVEKASYFIRNPSINDIITFQDPTQQSGCREENIVVKRVVAKAGDTVEVFQGCL 120

Query: 121 YVNGVAQDESFLAERPTYITKSTQVPKGHVYVLGDNRNNSYDSHI 166
           YVNG+AQDESFL ERPTY TKSTQ+P+GH+YVLGDNRNNSYDSHI
Sbjct: 121 YVNGIAQDESFLRERPTYTTKSTQIPEGHIYVLGDNRNNSYDSHI 165

[Close]
BLAST of Lsi08G004580 vs. NCBI nr
Match: gi|449463412|ref|XP_004149428.1| (PREDICTED: chloroplast processing peptidase [Cucumis sativus])

HSP 1 Score: 295.0 bits (754), Expect = 7.9e-77
Identity = 142/165 (86.06%), Postives = 149/165 (90.30%), Query Frame = 1 

Query: 1   MSCLKPFLLYSSLRWMTCQSWGFPRWPGFDGLLRFHVVLILWSMLLEIHFIPSSSMYPTL 60
           M+ L+PFL YSSLRWMT  SWGFPRWP FD  LRF V+LILWSMLLEIH IPSSSMYPTL
Sbjct: 1   MTFLRPFLFYSSLRWMTFHSWGFPRWPSFDAFLRFLVLLILWSMLLEIHSIPSSSMYPTL 60

Query: 61  RVGDRILVEKASYYIRNPSIDDIITFRDPTQQSGCREENIVVKRVVAKAGDTVEVCQGCL 120
           RVGDRILVE ASY IRNPSI+DIITFRDPTQQS  REENIVVKRVVAKAGDTVEVCQGCL
Sbjct: 61  RVGDRILVETASYLIRNPSINDIITFRDPTQQSALREENIVVKRVVAKAGDTVEVCQGCL 120

Query: 121 YVNGVAQDESFLAERPTYITKSTQVPKGHVYVLGDNRNNSYDSHI 166
           YVNGVA+DESFL ERP Y TKSTQ+P+GHVYVLGDNRNNSYDSHI
Sbjct: 121 YVNGVAKDESFLLERPMYTTKSTQIPEGHVYVLGDNRNNSYDSHI 165

[Close]
BLAST of Lsi08G004580 vs. NCBI nr
Match: gi|734433797|gb|KHN46996.1| (Chloroplast processing peptidase [Glycine soja])

HSP 1 Score: 240.4 bits (612), Expect = 2.3e-60
Identity = 113/171 (66.08%), Postives = 133/171 (77.78%), Query Frame = 1 

Query: 1   MSCLKPFLLYS------SLRWMTCQSWGFPRWPGFDGLLRFHVVLILWSMLLEIHFIPSS 60
           MS L+P  LY+      +LRW+ CQSWGF RWPG DG  R  VV++LWS L E+ FIPSS
Sbjct: 1   MSFLRPSALYNFLISYPALRWLPCQSWGFLRWPGLDGFFRLFVVVLLWSTLSELRFIPSS 60

Query: 61  SMYPTLRVGDRILVEKASYYIRNPSIDDIITFRDPTQQSGCREENIVVKRVVAKAGDTVE 120
           SMYPTLRVGDRI+VEKASYYIR+P+I DI+TF+DPTQ SG   + + +KR+VAKAGDTVE
Sbjct: 61  SMYPTLRVGDRIIVEKASYYIRSPAIHDIVTFKDPTQSSGENTDAVFIKRIVAKAGDTVE 120

Query: 121 VCQGCLYVNGVAQDESFLAERPTYITKSTQVPKGHVYVLGDNRNNSYDSHI 166
           V  G LY+NGVAQ E F+AE P Y  + T VP GHVYVLGDNRNNSYDSH+
Sbjct: 121 VNHGALYINGVAQQEDFIAEPPAYAMQLTHVPNGHVYVLGDNRNNSYDSHV 171

[Close]
BLAST of Lsi08G004580 vs. NCBI nr
Match: gi|1009136661|ref|XP_015885643.1| (PREDICTED: chloroplast processing peptidase-like isoform X1 [Ziziphus jujuba])

HSP 1 Score: 240.4 bits (612), Expect = 2.3e-60
Identity = 114/170 (67.06%), Postives = 135/170 (79.41%), Query Frame = 1 

Query: 1   MSCLKPFLL------YSSLRWMTCQSWGFPRWPGFDGLLRFHVVLILWSMLLEIHFIPSS 60
           MS L+P  L      Y+SL+WM CQSWGF RWPGFDG LR  V+ +LW+ML EI FIPSS
Sbjct: 1   MSFLRPSALSQLLITYTSLQWMPCQSWGFFRWPGFDGFLRLLVMFLLWTMLSEIRFIPSS 60

Query: 61  SMYPTLRVGDRILVEKASYYIRNPSIDDIITFRDPTQQSGCREENIVVKRVVAKAGDTVE 120
           SMYPTLRVGDRI+VEK SYYIR+P+I+DI+TF DPTQ+ G  E N+ +KR+VAKAGD VE
Sbjct: 61  SMYPTLRVGDRIIVEKGSYYIRSPAINDIVTFWDPTQKPGDGERNVFIKRIVAKAGDWVE 120

Query: 121 VCQGCLYVNGVAQDESFLAERPTYITKSTQVPKGHVYVLGDNRNNSYDSH 165
           +  G LYVNG+A+DE F+A  PTY++  T VPKGHVYVLGDNRN SYDSH
Sbjct: 121 INHGSLYVNGIAKDEDFIAGPPTYVSALTYVPKGHVYVLGDNRNKSYDSH 170

[Close]
BLAST of Lsi08G004580 vs. NCBI nr
Match: gi|922382129|ref|XP_013461292.1| (signal peptidase I family protein [Medicago truncatula])

HSP 1 Score: 239.2 bits (609), Expect = 5.1e-60
Identity = 117/171 (68.42%), Postives = 132/171 (77.19%), Query Frame = 1 

Query: 1   MSCLKPFLLYSSL------RWMTCQSWGFPRWPGFDGLLRFHVVLILWSMLLEIHFIPSS 60
           MS L+P  +Y+ L      RWM CQSWGF RWPG +G LR  VV +LWS    + +IPSS
Sbjct: 1   MSFLRPSAMYNFLITYPSSRWMPCQSWGFLRWPGLEGFLRLLVVFLLWSTFSHLCYIPSS 60

Query: 61  SMYPTLRVGDRILVEKASYYIRNPSIDDIITFRDPTQQSGCREENIVVKRVVAKAGDTVE 120
           SMYPTL VGDRI++EKASYYIR+PSI DIITFRDPTQ SG   + I +KRVVAK GDTVE
Sbjct: 61  SMYPTLHVGDRIIIEKASYYIRSPSIHDIITFRDPTQHSGDNTDVIFIKRVVAKEGDTVE 120

Query: 121 VCQGCLYVNGVAQDESFLAERPTYITKSTQVPKGHVYVLGDNRNNSYDSHI 166
           V  G LYVNGVAQ+E F+ E+PTY TK T VPKGHVYVLGDNRNNSYDSHI
Sbjct: 121 VHHGGLYVNGVAQEEDFVVEKPTYTTKLTYVPKGHVYVLGDNRNNSYDSHI 171

The following BLAST results are available for this feature:
BLAST of Lsi08G004580 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PLSP1_ARATH1.9e-3045.70Chloroplast processing peptidase OS=Arabidopsis thaliana GN=PLSP1 PE=2 SV=2[more]
TPP1_ARATH5.7e-2745.86Thylakoidal processing peptidase 1, chloroplastic OS=Arabidopsis thaliana GN=TPP... [more]
TPP2_ARATH4.9e-2647.69Probable thylakoidal processing peptidase 2, chloroplastic OS=Arabidopsis thalia... [more]
LEP1_SYNY31.0e-2344.27Probable signal peptidase I-1 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN... [more]
LEP2_SYNY35.0e-2342.62Probable signal peptidase I-2 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN... [more]
BLAST of Lsi08G004580 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KIU5_CUCSA5.5e-7786.06Uncharacterized protein OS=Cucumis sativus GN=Csa_6G382350 PE=4 SV=1[more]
I1KAD4_SOYBN1.6e-6066.08Uncharacterized protein OS=Glycine max GN=GLYMA_06G116300 PE=4 SV=1[more]
A0A0B2SJV2_GLYSO1.6e-6066.08Chloroplast processing peptidase OS=Glycine soja GN=glysoja_018363 PE=4 SV=1[more]
A0A072V0L3_MEDTR3.6e-6068.42Signal peptidase I family protein OS=Medicago truncatula GN=MTR_3g088435 PE=4 SV... [more]
C6SY30_SOYBN3.6e-6065.50Putative uncharacterized protein OS=Glycine max PE=2 SV=1[more]
BLAST of Lsi08G004580 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G24590.11.1e-3145.70 plastidic type i signal peptidase 1[more]
AT2G30440.13.2e-2845.86 thylakoid processing peptide[more]
AT1G06870.12.7e-2747.69 Peptidase S24/S26A/S26B/S26C family protein[more]
BLAST of Lsi08G004580 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659133491|ref|XP_008466751.1|4.5e-8087.88PREDICTED: chloroplast processing peptidase-like [Cucumis melo][more]
gi|449463412|ref|XP_004149428.1|7.9e-7786.06PREDICTED: chloroplast processing peptidase [Cucumis sativus][more]
gi|734433797|gb|KHN46996.1|2.3e-6066.08Chloroplast processing peptidase [Glycine soja][more]
gi|1009136661|ref|XP_015885643.1|2.3e-6067.06PREDICTED: chloroplast processing peptidase-like isoform X1 [Ziziphus jujuba][more]
gi|922382129|ref|XP_013461292.1|5.1e-6068.42signal peptidase I family protein [Medicago truncatula][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0008236serine-type peptidase activity
Vocabulary: Biological Process
TermDefinition
GO:0006508proteolysis
Vocabulary: INTERPRO
TermDefinition
IPR019759Peptidase S24/S26A/S26B
IPR019758Pept_S26A_signal_pept_1_CS
IPR019756Pept_S26A_signal_pept_1_Ser-AS
IPR015927Peptidase_S24_S26A/B/C
IPR000223Pept_S26A_signal_pept_1
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0033108 mitochondrial respiratory chain complex assembly
biological_process GO:0006627 protein processing involved in protein targeting to mitochondrion
biological_process GO:0006465 signal peptide processing
biological_process GO:0010027 thylakoid membrane organization
biological_process GO:0006508 proteolysis
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0042720 mitochondrial inner membrane peptidase complex
cellular_component GO:0016020 membrane
molecular_function GO:0004252 serine-type endopeptidase activity
molecular_function GO:0008236 serine-type peptidase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi08G004580.1Lsi08G004580.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000223Peptidase S26A, signal peptidase IPRINTSPR00727LEADERPTASEcoord: 101..113
score: 1.6E-18coord: 145..164
score: 1.6E-18coord: 44..60
score: 1.6
IPR000223Peptidase S26A, signal peptidase IPANTHERPTHR12383PROTEASE FAMILY S26 MITOCHONDRIAL INNER MEMBRANE PROTEASE-RELATEDcoord: 21..165
score: 4.3
IPR000223Peptidase S26A, signal peptidase ITIGRFAMsTIGR02227TIGR02227coord: 35..163
score: 4.3
IPR015927Peptidase S24/S26A/S26B/S26CunknownSSF51306LexA/Signal peptidasecoord: 44..164
score: 1.67
IPR019756Peptidase S26A, signal peptidase I, serine active sitePROSITEPS00501SPASE_I_1coord: 53..60
scor
IPR019758Peptidase S26A, signal peptidase I, conserved sitePROSITEPS00761SPASE_I_3coord: 150..163
scor
IPR019759Peptidase S24/S26A/S26BPFAMPF00717Peptidase_S24coord: 51..124
score: 5.5
NoneNo IPR availablePANTHERPTHR12383:SF24SUBFAMILY NOT NAMEDcoord: 21..165
score: 4.3

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Lsi08G004580Csa6G382350Cucumber (Chinese Long) v2culsiB480
Lsi08G004580CSPI06G20110Wild cucumber (PI 183967)cpilsiB489
Lsi08G004580Cucsa.328200Cucumber (Gy14) v1cgylsiB536
Lsi08G004580CmoCh15G006660Cucurbita moschata (Rifu)cmolsiB282
Lsi08G004580CmoCh04G025010Cucurbita moschata (Rifu)cmolsiB697
Lsi08G004580Cla013913Watermelon (97103) v1lsiwmB466
Lsi08G004580MELO3C010646Melon (DHL92) v3.5.1lsimeB475
Lsi08G004580ClCG08G005950Watermelon (Charleston Gray)lsiwcgB439
Lsi08G004580MELO3C010646.2Melon (DHL92) v3.6.1lsimedB494
Lsi08G004580Cla97C08G148710Watermelon (97103) v2lsiwmbB445
Lsi08G004580Bhi04G001489Wax gourdlsiwgoB602
Lsi08G004580Cp4.1LG01g20660Cucurbita pepo (Zucchini)cpelsiB382
Lsi08G004580CsGy6G019580Cucumber (Gy14) v2cgyblsiB446
Lsi08G004580Carg15741Silver-seed gourdcarlsiB060
Lsi08G004580Carg01549Silver-seed gourdcarlsiB758
Lsi08G004580CsaV3_6G034140Cucumber (Chinese Long) v3cuclsiB511
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi08G004580Cucurbita pepo (Zucchini)cpelsiB158
Lsi08G004580Cucurbita pepo (Zucchini)cpelsiB653
Lsi08G004580Wild cucumber (PI 183967)cpilsiB319
Lsi08G004580Cucumber (Chinese Long) v2culsiB319
Lsi08G004580Melon (DHL92) v3.5.1lsimeB489
Lsi08G004580Watermelon (Charleston Gray)lsiwcgB421
Lsi08G004580Watermelon (97103) v1lsiwmB495
Lsi08G004580Cucumber (Gy14) v2cgyblsiB291
Lsi08G004580Melon (DHL92) v3.6.1lsimedB508
Lsi08G004580Cucumber (Chinese Long) v3cuclsiB339
Lsi08G004580Watermelon (97103) v2lsiwmbB428
Lsi08G004580Wax gourdlsiwgoB625
Lsi08G004580Bottle gourd (USVL1VR-Ls)lsilsiB146
Lsi08G004580Cucurbita maxima (Rimu)cmalsiB042
Lsi08G004580Cucurbita maxima (Rimu)cmalsiB294
Lsi08G004580Cucurbita maxima (Rimu)cmalsiB703
Lsi08G004580Cucurbita moschata (Rifu)cmolsiB029