Csa6G382350 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa6G382350
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Signal peptidase I family protein; contains IPR000223 (Peptidase S26A, signal peptidase I), IPR015927 (Peptidase S24/S26A/S26B/S26C)
Location	Chr6 : 17155736 .. 17159071 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAAAAATTTGAAGAATGAAGAACGTAGTCTCATTTGAAGAACAAAATCGTTGTATCAACTCATTTTTTTCTCCACTCCTCACTTTCCCAGAAATTTACACACGAGGTCACTTCCTCCTCTTTCTCTTCCATTTTCTCCAATTTCAATCCAAATTCCATCGGACCTCCTCCATTCTCCACACACATTTCCTCTCTTTCCTCCCATATCTGGAATGACCTTTTTGAGGCCCTTTCTGTTTTACTCTTCGCTGCGATGGATGACTTTTCACAGTTGGGGTTTTCCCAGATGGCCTAGCTTTGACGCTTTCCTTAGATTTCTTGTCCTTTTGATCTTGTGGTCTATGCTTTTGGAGATTCATTCCATTCCTTCCTCATCAATGTATCCAACTCTTCGCGTCGGCGATCGAATTCTTGTCGAGACGGTAATATTTTTCAAGCTGGGTTTTGTATTTATCTGTCGAATTATGTGCTTAATTTTTTTTTTTTTTAAATTTCAGACTTCCACTAGGTTTTAGGGTATTTTTGTGCATGTGATGTGAAAATGGATTGAGATTTTAAGCGTGGTTATGATGAAGCTCGATCGATCGACTGAATCTTCAAAATTATGTGTCAGTTATATCATATTCGAAGAGTATCGGTGAATCATGTGTATTAAAGTATTAACTATGCATTAGTTTACAAAAACGTTGGTAGTTTCTTGTTAGTTCTATTATTATATAAAGAAGAAAGAATCAAACATATAGAAAACAGTATAATCATGAGCAAGACAACGGAATGTGATTTCAGTAATTTAGACAGAAATTATTTTCGTCTTTATAAGTTTTACAAGAGCCTGTCATTTTTTGAACGCGAAAACTCGTTTTTGAATAGTTTGGTCTAAGCTGAGGTAACATAGCTAGGTGAACAAAGTAGAGGGACTTTTGGGGGAATAAGTTTAAACTCTGTTGTATTGATGACCTATGACATTTTGTAACGTCTAAACATTGTCCTATGACATTAGTTGAGACACTCACAGATAACAAAGAAAAAAAAAGGATGGTTAATGTGATTTACATTGACTGTTCTGAAAATTTTCATGTGATCTCTGCTCAAACTAATATCAATGTCCTGGTTGCATTTTCTTCAGGCCTCTTATCTTATCAGAAATCCTTCTATAAATGACATTATAACCTTCCGAGACCCGACACAGGTTAGTTGACAGATGACTAATCTGCATGTCTTTTACTTGAACAGTTTTTCCTAACAGGATCGTGTTGGAATTATGGTGTGCTATAGCAATCTGCACTCAGAGAAGAGAACATTGTTGTAAAGAGAGTTGTTGCCAAAGCCGGAGACACAGTTGAGGTATGGAAGATTGTTGTTATGTTTCTATTGAAAATAACTAGTGATATGAATGTCTAAGACATCAAATTATTATTTATATTTATTTTGATGTAATCTTAGTATTTTTCTATCTTATCCTTTTTATGTTCTATTATTCAGTAGGGGGTATTTTTGTCATTTTACTATGATCAATGACGTGGCATTAGGATTTTCATTAGGCAATTGTGGCCTTTGTGCTTAGTTTAGCTCAGGGAGCTTCTTGAATTTGGTAAGTATTGAATTGCATGCCAAGAACATTCGAGTGGCATTAATCATCCTATCTTGTAGAGCGTTCAAAGCTTGAGCGCAACTTATTCTTGTTCTTGTCTCAAGAGCTTTGATCTTAAGATAATTTGTATCTAACCCAATCCTTAGGGTTGAAATCATATAGATGGAGGGTTCTAATGTATGAGAATTAGGAATTCTGATAGCAAAAGAGTTCCTAATTCTAAGTCACTAGTGTTTTCGTATCAATGGGAGTGACCACTTTTTGTGCACTAATAAATGTACACTTATAGCTACCCTTAAATGGTGACTCTAGTAATAAGAAATTGGGTTTGTTGATGTATCTAAGGTCCAAGCTTTGCCTATACAGAAGATTGTTGCCTGAAATAATTTCGATGAGCTACGAACATAATGCAAGAAATGGGACTCCTCAACAGTCCAGTTATGAAAGAAAATGTATATTGGCAGTTTATGTTTAACTACTTTTCCATTTTATGAGTCACTGACTGCTAAAAACGCCATATCAATTAGCAGGAGAAGAACTTTTAGTGTTGAAGTCAAAGAAACTAACCATTGATGTGGTTTTTATCCAACACCTTTCAGGTTTGTCAGGGGTGCCTCTATGTCAATGGGGTTGCTAAGGATGAAAGCTTCTTACTGGAGCGGCCAATGTACACCACAAAGTCAACTGTGAGTTTTGTTTGAAACTTGACTTTCGTTTTCATTTTTACCGATTCCTCCTACAATTTTCTATTAGAGAGATAAGGCTTTTAAAGCACGTCCTTAGAGATTTTATAGATGAACCGAAATCGTTAAGCAGTCAAGGTGATTTCATAATGCAAAACGAACCCATATTCTTTAGAAATCATCTTCAGACTGTCATTGATTTTCACCACAGCTAAGTCATTGATATTTTGATCAGTCGTTGGAATCAGACTTGAATAATACTGGTTTCCTACGGAATGTGACTTGTAGTTTCAAGTTTGTAGTTAATTTCACTTGTTTGAAACTTGCAGCAAATTCCAGAAGGCCATGTTTACGTGTTGGGCGACAACCGCAACAACAGCTATGACTCCCATATTTGGTTAGTGTTCCTAACTTCATGTTATATTATGCATTTTTGCTGGTTGTCGTTGGTTCTGATTGGGGTCAGGGTGGTTCGGTGTCAGTTTGGAAATATTCCAAATCGACAAATTTAAAAAAATAAAAAATAGAACCGATAGACCTTTACTCCTCAACAGTCAAGGTCGGTTCTAACATTTACTAAACTAACCGTAGTTGGTTTGGTGGCAATGTGGTCGAAAAACCGACTCCAATTGACCTATGCTCACCCATAGTTCTCATGCTGTATAGTTTGCCTCTCCAAAGAAAAAGTCTTTCAACATTTTTGAATTGTATCATTGTTCTTGGAATTGAATGCTCCCCAAGTTTTTATTTCTCTCTCTCAACTTCATCTACGATGTTCTTATAATTCTTGTCACTCACTTGAACAGGGGACCTCTGCCCGTAAAAAACATCATAGGGAGATACCTGTGTTCATGCCATAAACCAACAAGTAAATGATACATTCAACAAATTGAAATGAGGTCAGAAACATTATTCTATTTGTATGTGATAAATTATTTTAGTTCCAAATCTCATGTAGGATTAGGCTTGTTTGGCATGGATGGATATGAATACTAAAGAAACATTTTATTCATTCTTAGGTGTGGTTTATAAATTTGTGTATTAGGTGTGATGGAAGTTAGG

mRNA sequence

ATGACCTTTTTGAGGCCCTTTCTGTTTTACTCTTCGCTGCGATGGATGACTTTTCACAGTTGGGGTTTTCCCAGATGGCCTAGCTTTGACGCTTTCCTTAGATTTCTTGTCCTTTTGATCTTGTGGTCTATGCTTTTGGAGATTCATTCCATTCCTTCCTCATCAATGTATCCAACTCTTCGCGTCGGCGATCGAATTCTTGTCGAGACGGCCTCTTATCTTATCAGAAATCCTTCTATAAATGACATTATAACCTTCCGAGACCCGACACAGCAATCTGCACTCAGAGAAGAGAACATTGTTGTAAAGAGAGTTGTTGCCAAAGCCGGAGACACAGTTGAGGTTTGTCAGGGGTGCCTCTATGTCAATGGGGTTGCTAAGGATGAAAGCTTCTTACTGGAGCGGCCAATGTACACCACAAAGTCAACTCAAATTCCAGAAGGCCATGTTTACGTGTTGGGCGACAACCGCAACAACAGCTATGACTCCCATATTTGGGGACCTCTGCCCGTAAAAAACATCATAGGGAGATACCTGTGTTCATGCCATAAACCAACAAGTAAATGA

Coding sequence (CDS)

ATGACCTTTTTGAGGCCCTTTCTGTTTTACTCTTCGCTGCGATGGATGACTTTTCACAGTTGGGGTTTTCCCAGATGGCCTAGCTTTGACGCTTTCCTTAGATTTCTTGTCCTTTTGATCTTGTGGTCTATGCTTTTGGAGATTCATTCCATTCCTTCCTCATCAATGTATCCAACTCTTCGCGTCGGCGATCGAATTCTTGTCGAGACGGCCTCTTATCTTATCAGAAATCCTTCTATAAATGACATTATAACCTTCCGAGACCCGACACAGCAATCTGCACTCAGAGAAGAGAACATTGTTGTAAAGAGAGTTGTTGCCAAAGCCGGAGACACAGTTGAGGTTTGTCAGGGGTGCCTCTATGTCAATGGGGTTGCTAAGGATGAAAGCTTCTTACTGGAGCGGCCAATGTACACCACAAAGTCAACTCAAATTCCAGAAGGCCATGTTTACGTGTTGGGCGACAACCGCAACAACAGCTATGACTCCCATATTTGGGGACCTCTGCCCGTAAAAAACATCATAGGGAGATACCTGTGTTCATGCCATAAACCAACAAGTAAATGA

Protein sequence

MTFLRPFLFYSSLRWMTFHSWGFPRWPSFDAFLRFLVLLILWSMLLEIHSIPSSSMYPTLRVGDRILVETASYLIRNPSINDIITFRDPTQQSALREENIVVKRVVAKAGDTVEVCQGCLYVNGVAKDESFLLERPMYTTKSTQIPEGHVYVLGDNRNNSYDSHIWGPLPVKNIIGRYLCSCHKPTSK*

Homology

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BLAST of Csa6G382350 vs. Swiss-Prot
Match: PLSP1_ARATH (Chloroplast processing peptidase OS=Arabidopsis thaliana GN=PLSP1 PE=2 SV=2)

HSP 1 Score: 157.9 bits (398), Expect = 1.1e-37
Identity = 80/163 (49.08%), Postives = 100/163 (61.35%), Query Frame = 1


Query: 23  FPRWPSFDA------FLRFLVLLILWSMLLEIHSIPSSSMYPTLRVGDRILVETASYLIR 82
           FP W  F +      F+   V L     + E   IPS SMYPT  VGDR++ E  SY  R
Sbjct: 104 FPEWLDFTSDDAQTVFVAIAVSLAFRYFIAEPRYIPSLSMYPTFDVGDRLVAEKVSYYFR 163

Query: 83  NPSINDIITFRDPT--QQSALREENIVVKRVVAKAGDTVEVCQGCLYVNGVAKDESFLLE 142
            P  NDI+ F+ P   Q+    + ++ +KR+VAK GD VEV  G L VNGVA++E F+LE
Sbjct: 164 KPCANDIVIFKSPPVLQEVGYTDADVFIKRIVAKEGDLVEVHNGKLMVNGVARNEKFILE 223

Query: 143 RPMYTTKSTQIPEGHVYVLGDNRNNSYDSHIWGPLPVKNIIGR 178
            P Y     ++PE  V+V+GDNRNNSYDSH+WGPLP+KNIIGR
Sbjct: 224 PPGYEMTPIRVPENSVFVMGDNRNNSYDSHVWGPLPLKNIIGR 266

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BLAST of Csa6G382350 vs. Swiss-Prot
Match: TPP2_ARATH (Probable thylakoidal processing peptidase 2, chloroplastic OS=Arabidopsis thaliana GN=TPP2 PE=2 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 1.2e-33
Identity = 74/149 (49.66%), Postives = 93/149 (62.42%), Query Frame = 1


Query: 31  AFLRFLVLLILWSMLLEIHSIPSSSMYPTLRVGDRILVETASYLIRNPSINDIITFRDPT 90
           AF    V L+  S L E  SIPS+SM PTL VGDR++ E  SY  R P ++DI+ F+ P 
Sbjct: 190 AFTAVTVSLLFRSALAEPKSIPSTSMLPTLDVGDRVIAEKVSYFFRKPEVSDIVIFKAPP 249

Query: 91  --QQSALREENIVVKRVVAKAGDTVEVCQGCLYVNGVAKDESFLLERPMYTTKSTQIPEG 150
              +      ++ +KR+VA  GD VEVC G L VN   + E F+LE   Y  +   +PEG
Sbjct: 250 ILVEHGYSCADVFIKRIVASEGDWVEVCDGKLLVNDTVQAEDFVLEPIDYEMEPMFVPEG 309

Query: 151 HVYVLGDNRNNSYDSHIWGPLPVKNIIGR 178
           +V+VLGDNRN S+DSH WGPLP+KNIIGR
Sbjct: 310 YVFVLGDNRNKSFDSHNWGPLPIKNIIGR 338

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BLAST of Csa6G382350 vs. Swiss-Prot
Match: TPP1_ARATH (Thylakoidal processing peptidase 1, chloroplastic OS=Arabidopsis thaliana GN=TPP1 PE=2 SV=2)

HSP 1 Score: 142.5 bits (358), Expect = 4.7e-33
Identity = 69/152 (45.39%), Postives = 95/152 (62.50%), Query Frame = 1


Query: 31  AFLRFLVLLILWSMLLEIHSIPSSSMYPTLRVGDRILVETASYLIRNPSINDIITFRDPT 90
           AF    V ++  S L E  SIPS+SMYPTL  GDR++ E  SY  R P ++DI+ F+ P 
Sbjct: 160 AFTAVTVSILFRSALAEPKSIPSTSMYPTLDKGDRVMAEKVSYFFRKPEVSDIVIFKAPP 219

Query: 91  -----QQSALREENIVVKRVVAKAGDTVEVCQGCLYVNGVAKDESFLLERPMYTTKSTQI 150
                 +      ++ +KR+VA  GD VEV  G L+VN + ++E F+LE   Y  +   +
Sbjct: 220 ILLEYPEYGYSSNDVFIKRIVASEGDWVEVRDGKLFVNDIVQEEDFVLEPMSYEMEPMFV 279

Query: 151 PEGHVYVLGDNRNNSYDSHIWGPLPVKNIIGR 178
           P+G+V+VLGDNRN S+DSH WGPLP++NI+GR
Sbjct: 280 PKGYVFVLGDNRNKSFDSHNWGPLPIENIVGR 311

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BLAST of Csa6G382350 vs. Swiss-Prot
Match: LEP1_SYNY3 (Probable signal peptidase I-1 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=lepB1 PE=3 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 1.3e-27
Identity = 65/146 (44.52%), Postives = 84/146 (57.53%), Query Frame = 1


Query: 36  LVLLILWSMLLEIHSIPSSSMYPTLRVGDRILVETASYLIRNPSINDIITFRDPT--QQS 95
           ++ L+L   + E   IPS SM PTL  GDR++VE  SY    P + DII F  P   Q  
Sbjct: 25  VLALLLRFFVAEPRYIPSDSMLPTLEQGDRLVVEKVSYHFHPPQVGDIIVFHPPELLQVQ 84

Query: 96  ALREENIVVKRVVAKAGDTVEVCQGCLYVNGVAKDESFLLERPMYTTKSTQIPEGHVYVL 155
                   +KRV+A  G TVEV  G +Y +G    E ++LE P Y   + ++P+G V+V+
Sbjct: 85  GYDLGQAFIKRVIALPGQTVEVNNGIVYRDGQPLQEEYILEPPQYNLPAVRVPDGQVFVM 144

Query: 156 GDNRNNSYDSHIWGPLPVKNIIGRYL 180
           GDNRNNS DSH+WG LP +NIIG  L
Sbjct: 145 GDNRNNSNDSHVWGFLPQQNIIGHAL 170

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BLAST of Csa6G382350 vs. Swiss-Prot
Match: LEP2_SYNY3 (Probable signal peptidase I-2 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=lepB2 PE=3 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 1.2e-25
Identity = 55/135 (40.74%), Postives = 79/135 (58.52%), Query Frame = 1


Query: 43  SMLLEIHSIPSSSMYPTLRVGDRILVETASYLIRNPSINDIITFRDPTQQSALREENIVV 102
           + + E   IPSSSM PTL++ DR+++E  SY +R+P   +I+ F       A    +  +
Sbjct: 40  TFVAEARYIPSSSMEPTLQINDRLIIEKISYRLRDPERGEIVVFNPTDALKAKNFHDAFI 99

Query: 103 KRVVAKAGDTVEVCQGCLYVNGVAKDESFLLERPMYTTKSTQIPEGHVYVLGDNRNNSYD 162
           KR++   GD V V QG +YVNG   DE+++   P Y     ++P+    VLGDNRNNSYD
Sbjct: 100 KRIIGLPGDEVRVSQGNVYVNGKMLDENYIAAPPAYEYGPVKVPDDQYLVLGDNRNNSYD 159

Query: 163 SHIWGPLPVKNIIGR 178
           SH WG +P + ++GR
Sbjct: 160 SHYWGFVPREKLLGR 174

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BLAST of Csa6G382350 vs. TrEMBL
Match: A0A0A0KIU5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G382350 PE=4 SV=1)

HSP 1 Score: 391.7 bits (1005), Expect = 4.9e-106
Identity = 188/188 (100.00%), Postives = 188/188 (100.00%), Query Frame = 1


Query: 1   MTFLRPFLFYSSLRWMTFHSWGFPRWPSFDAFLRFLVLLILWSMLLEIHSIPSSSMYPTL 60
           MTFLRPFLFYSSLRWMTFHSWGFPRWPSFDAFLRFLVLLILWSMLLEIHSIPSSSMYPTL
Sbjct: 1   MTFLRPFLFYSSLRWMTFHSWGFPRWPSFDAFLRFLVLLILWSMLLEIHSIPSSSMYPTL 60

Query: 61  RVGDRILVETASYLIRNPSINDIITFRDPTQQSALREENIVVKRVVAKAGDTVEVCQGCL 120
           RVGDRILVETASYLIRNPSINDIITFRDPTQQSALREENIVVKRVVAKAGDTVEVCQGCL
Sbjct: 61  RVGDRILVETASYLIRNPSINDIITFRDPTQQSALREENIVVKRVVAKAGDTVEVCQGCL 120

Query: 121 YVNGVAKDESFLLERPMYTTKSTQIPEGHVYVLGDNRNNSYDSHIWGPLPVKNIIGRYLC 180
           YVNGVAKDESFLLERPMYTTKSTQIPEGHVYVLGDNRNNSYDSHIWGPLPVKNIIGRYLC
Sbjct: 121 YVNGVAKDESFLLERPMYTTKSTQIPEGHVYVLGDNRNNSYDSHIWGPLPVKNIIGRYLC 180

Query: 181 SCHKPTSK 189
           SCHKPTSK
Sbjct: 181 SCHKPTSK 188

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BLAST of Csa6G382350 vs. TrEMBL
Match: A0A072V0L3_MEDTR (Signal peptidase I family protein OS=Medicago truncatula GN=MTR_3g088435 PE=4 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 1.7e-66
Identity = 124/193 (64.25%), Postives = 147/193 (76.17%), Query Frame = 1


Query: 1   MTFLRP------FLFYSSLRWMTFHSWGFPRWPSFDAFLRFLVLLILWSMLLEIHSIPSS 60
           M+FLRP       + Y S RWM   SWGF RWP  + FLR LV+ +LWS    +  IPSS
Sbjct: 1   MSFLRPSAMYNFLITYPSSRWMPCQSWGFLRWPGLEGFLRLLVVFLLWSTFSHLCYIPSS 60

Query: 61  SMYPTLRVGDRILVETASYLIRNPSINDIITFRDPTQQSALREENIVVKRVVAKAGDTVE 120
           SMYPTL VGDRI++E ASY IR+PSI+DIITFRDPTQ S    + I +KRVVAK GDTVE
Sbjct: 61  SMYPTLHVGDRIIIEKASYYIRSPSIHDIITFRDPTQHSGDNTDVIFIKRVVAKEGDTVE 120

Query: 121 VCQGCLYVNGVAKDESFLLERPMYTTKSTQIPEGHVYVLGDNRNNSYDSHIWGPLPVKNI 180
           V  G LYVNGVA++E F++E+P YTTK T +P+GHVYVLGDNRNNSYDSHIWGPLP+KNI
Sbjct: 121 VHHGGLYVNGVAQEEDFVVEKPTYTTKLTYVPKGHVYVLGDNRNNSYDSHIWGPLPMKNI 180

Query: 181 IGRYLCSCHKPTS 188
           +GRY   CH+PT+
Sbjct: 181 VGRYAMCCHRPTN 193

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BLAST of Csa6G382350 vs. TrEMBL
Match: I3T671_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1)

HSP 1 Score: 254.2 bits (648), Expect = 1.2e-64
Identity = 122/193 (63.21%), Postives = 148/193 (76.68%), Query Frame = 1


Query: 1   MTFLRP------FLFYSSLRWMTFHSWGFPRWPSFDAFLRFLVLLILWSMLLEIHSIPSS 60
           M+FLRP       + YSSLRWM   S GF RWP  D FLR LV+ +LWS   E+ SIPSS
Sbjct: 1   MSFLRPSALYHFLITYSSLRWMPCQSSGFLRWPGLDGFLRLLVVGLLWSTFSELRSIPSS 60

Query: 61  SMYPTLRVGDRILVETASYLIRNPSINDIITFRDPTQQSALREENIVVKRVVAKAGDTVE 120
           SM+PTLRV DRI+VE ASY  R+P+I++I+TFRDPTQ S    + + +KRVVAK GDTVE
Sbjct: 61  SMFPTLRVADRIIVEKASYYFRSPAIHEIVTFRDPTQLSGDNPDVVFIKRVVAKEGDTVE 120

Query: 121 VCQGCLYVNGVAKDESFLLERPMYTTKSTQIPEGHVYVLGDNRNNSYDSHIWGPLPVKNI 180
           V  G LY+NGVA++E F+ E+P YT KST +P+GHVYVLGDNRNNSYDSH+WGPLPVKNI
Sbjct: 121 VHHGRLYINGVAQEEDFIAEQPAYTVKSTYVPKGHVYVLGDNRNNSYDSHVWGPLPVKNI 180

Query: 181 IGRYLCSCHKPTS 188
           IGRY+   H+PT+
Sbjct: 181 IGRYVMCFHRPTN 193

[Close]

BLAST of Csa6G382350 vs. TrEMBL
Match: A0A0D2UTI1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G248500 PE=4 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 2.1e-64
Identity = 117/193 (60.62%), Postives = 146/193 (75.65%), Query Frame = 1


Query: 1   MTFLRP------FLFYSSLRWMTFHSWGFPRWPSFDAFLRFLVLLILWSMLLEIHSIPSS 60
           M+FLRP      F+ + S RWM   SWGF RWP FD F RFLV+ +LWS   EI  IPSS
Sbjct: 123 MSFLRPCALYKSFITFPSRRWMPCQSWGFLRWPGFDGFFRFLVIALLWSTFSEIRFIPSS 182

Query: 61  SMYPTLRVGDRILVETASYLIRNPSINDIITFRDPTQQSALREENIVVKRVVAKAGDTVE 120
           SMYPTLRVGDRI+VE ASY  R+P+INDI+TFR P Q++   ++ +++KRVVAK GD V+
Sbjct: 183 SMYPTLRVGDRIIVEKASYFFRSPAINDIVTFRPPEQETGFGKDAVLIKRVVAKGGDLVQ 242

Query: 121 VCQGCLYVNGVAKDESFLLERPMYTTKSTQIPEGHVYVLGDNRNNSYDSHIWGPLPVKNI 180
           V  G LYVNGVA++E F+ ERP YT +   +P GHVYVLGDNRNNSYDSH WGPLPV+NI
Sbjct: 243 VHHGSLYVNGVAQNEDFIAERPSYTLELKYVPSGHVYVLGDNRNNSYDSHDWGPLPVENI 302

Query: 181 IGRYLCSCHKPTS 188
           +GRY+  C++P++
Sbjct: 303 VGRYVMCCYRPSN 315

[Close]

BLAST of Csa6G382350 vs. TrEMBL
Match: A0A0B0NU84_GOSAR (Chloroplast processing peptidase-like protein OS=Gossypium arboreum GN=F383_06208 PE=4 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 2.1e-64
Identity = 116/193 (60.10%), Postives = 146/193 (75.65%), Query Frame = 1


Query: 1   MTFLRP------FLFYSSLRWMTFHSWGFPRWPSFDAFLRFLVLLILWSMLLEIHSIPSS 60
           M+FLRP      F+ + S RWM   SWGF RWP FD F RFLV+ +LWS   EI  IPSS
Sbjct: 1   MSFLRPCALYKSFITFPSRRWMPCQSWGFLRWPGFDGFFRFLVIALLWSTFSEIRFIPSS 60

Query: 61  SMYPTLRVGDRILVETASYLIRNPSINDIITFRDPTQQSALREENIVVKRVVAKAGDTVE 120
           SMYPTLRVGDRI+VE ASY  R+P+INDI+TFR P Q++   ++ +++KR+VAK GD V+
Sbjct: 61  SMYPTLRVGDRIIVEKASYFFRSPAINDIVTFRPPEQETGFGKDAVLIKRIVAKGGDLVQ 120

Query: 121 VCQGCLYVNGVAKDESFLLERPMYTTKSTQIPEGHVYVLGDNRNNSYDSHIWGPLPVKNI 180
           V  G LYVNGVA++E F+ ERP YT +   +P GHVYVLGDNRNNSYDSH WGPLPV+NI
Sbjct: 121 VHHGSLYVNGVAQNEDFIAERPTYTLELNYVPSGHVYVLGDNRNNSYDSHDWGPLPVENI 180

Query: 181 IGRYLCSCHKPTS 188
           +GRY+  C++P++
Sbjct: 181 VGRYVMCCYRPSN 193

[Close]

BLAST of Csa6G382350 vs. TAIR10
Match: AT3G24590.1 (AT3G24590.1 plastidic type i signal peptidase 1)

HSP 1 Score: 157.9 bits (398), Expect = 6.1e-39
Identity = 80/163 (49.08%), Postives = 100/163 (61.35%), Query Frame = 1


Query: 23  FPRWPSFDA------FLRFLVLLILWSMLLEIHSIPSSSMYPTLRVGDRILVETASYLIR 82
           FP W  F +      F+   V L     + E   IPS SMYPT  VGDR++ E  SY  R
Sbjct: 104 FPEWLDFTSDDAQTVFVAIAVSLAFRYFIAEPRYIPSLSMYPTFDVGDRLVAEKVSYYFR 163

Query: 83  NPSINDIITFRDPT--QQSALREENIVVKRVVAKAGDTVEVCQGCLYVNGVAKDESFLLE 142
            P  NDI+ F+ P   Q+    + ++ +KR+VAK GD VEV  G L VNGVA++E F+LE
Sbjct: 164 KPCANDIVIFKSPPVLQEVGYTDADVFIKRIVAKEGDLVEVHNGKLMVNGVARNEKFILE 223

Query: 143 RPMYTTKSTQIPEGHVYVLGDNRNNSYDSHIWGPLPVKNIIGR 178
            P Y     ++PE  V+V+GDNRNNSYDSH+WGPLP+KNIIGR
Sbjct: 224 PPGYEMTPIRVPENSVFVMGDNRNNSYDSHVWGPLPLKNIIGR 266

[Close]

BLAST of Csa6G382350 vs. TAIR10
Match: AT1G06870.1 (AT1G06870.1 Peptidase S24/S26A/S26B/S26C family protein)

HSP 1 Score: 144.4 bits (363), Expect = 7.0e-35
Identity = 74/149 (49.66%), Postives = 93/149 (62.42%), Query Frame = 1


Query: 31  AFLRFLVLLILWSMLLEIHSIPSSSMYPTLRVGDRILVETASYLIRNPSINDIITFRDPT 90
           AF    V L+  S L E  SIPS+SM PTL VGDR++ E  SY  R P ++DI+ F+ P 
Sbjct: 190 AFTAVTVSLLFRSALAEPKSIPSTSMLPTLDVGDRVIAEKVSYFFRKPEVSDIVIFKAPP 249

Query: 91  --QQSALREENIVVKRVVAKAGDTVEVCQGCLYVNGVAKDESFLLERPMYTTKSTQIPEG 150
              +      ++ +KR+VA  GD VEVC G L VN   + E F+LE   Y  +   +PEG
Sbjct: 250 ILVEHGYSCADVFIKRIVASEGDWVEVCDGKLLVNDTVQAEDFVLEPIDYEMEPMFVPEG 309

Query: 151 HVYVLGDNRNNSYDSHIWGPLPVKNIIGR 178
           +V+VLGDNRN S+DSH WGPLP+KNIIGR
Sbjct: 310 YVFVLGDNRNKSFDSHNWGPLPIKNIIGR 338

[Close]

BLAST of Csa6G382350 vs. TAIR10
Match: AT2G30440.1 (AT2G30440.1 thylakoid processing peptide)

HSP 1 Score: 142.5 bits (358), Expect = 2.6e-34
Identity = 69/152 (45.39%), Postives = 95/152 (62.50%), Query Frame = 1


Query: 31  AFLRFLVLLILWSMLLEIHSIPSSSMYPTLRVGDRILVETASYLIRNPSINDIITFRDPT 90
           AF    V ++  S L E  SIPS+SMYPTL  GDR++ E  SY  R P ++DI+ F+ P 
Sbjct: 160 AFTAVTVSILFRSALAEPKSIPSTSMYPTLDKGDRVMAEKVSYFFRKPEVSDIVIFKAPP 219

Query: 91  -----QQSALREENIVVKRVVAKAGDTVEVCQGCLYVNGVAKDESFLLERPMYTTKSTQI 150
                 +      ++ +KR+VA  GD VEV  G L+VN + ++E F+LE   Y  +   +
Sbjct: 220 ILLEYPEYGYSSNDVFIKRIVASEGDWVEVRDGKLFVNDIVQEEDFVLEPMSYEMEPMFV 279

Query: 151 PEGHVYVLGDNRNNSYDSHIWGPLPVKNIIGR 178
           P+G+V+VLGDNRN S+DSH WGPLP++NI+GR
Sbjct: 280 PKGYVFVLGDNRNKSFDSHNWGPLPIENIVGR 311

[Close]

BLAST of Csa6G382350 vs. NCBI nr
Match: gi|449463412|ref|XP_004149428.1| (PREDICTED: chloroplast processing peptidase [Cucumis sativus])

HSP 1 Score: 391.7 bits (1005), Expect = 7.1e-106
Identity = 188/188 (100.00%), Postives = 188/188 (100.00%), Query Frame = 1


Query: 1   MTFLRPFLFYSSLRWMTFHSWGFPRWPSFDAFLRFLVLLILWSMLLEIHSIPSSSMYPTL 60
           MTFLRPFLFYSSLRWMTFHSWGFPRWPSFDAFLRFLVLLILWSMLLEIHSIPSSSMYPTL
Sbjct: 1   MTFLRPFLFYSSLRWMTFHSWGFPRWPSFDAFLRFLVLLILWSMLLEIHSIPSSSMYPTL 60

Query: 61  RVGDRILVETASYLIRNPSINDIITFRDPTQQSALREENIVVKRVVAKAGDTVEVCQGCL 120
           RVGDRILVETASYLIRNPSINDIITFRDPTQQSALREENIVVKRVVAKAGDTVEVCQGCL
Sbjct: 61  RVGDRILVETASYLIRNPSINDIITFRDPTQQSALREENIVVKRVVAKAGDTVEVCQGCL 120

Query: 121 YVNGVAKDESFLLERPMYTTKSTQIPEGHVYVLGDNRNNSYDSHIWGPLPVKNIIGRYLC 180
           YVNGVAKDESFLLERPMYTTKSTQIPEGHVYVLGDNRNNSYDSHIWGPLPVKNIIGRYLC
Sbjct: 121 YVNGVAKDESFLLERPMYTTKSTQIPEGHVYVLGDNRNNSYDSHIWGPLPVKNIIGRYLC 180

Query: 181 SCHKPTSK 189
           SCHKPTSK
Sbjct: 181 SCHKPTSK 188

[Close]

BLAST of Csa6G382350 vs. NCBI nr
Match: gi|659133491|ref|XP_008466751.1| (PREDICTED: chloroplast processing peptidase-like [Cucumis melo])

HSP 1 Score: 360.1 bits (923), Expect = 2.3e-96
Identity = 170/188 (90.43%), Postives = 177/188 (94.15%), Query Frame = 1


Query: 1   MTFLRPFLFYSSLRWMTFHSWGFPRWPSFDAFLRFLVLLILWSMLLEIHSIPSSSMYPTL 60
           M+FLRPFLFYSSLRWM FHSWGFPRWP FD FLRF+VLLILWSMLLEIHSIPSSSMYPTL
Sbjct: 1   MSFLRPFLFYSSLRWMIFHSWGFPRWPGFDGFLRFIVLLILWSMLLEIHSIPSSSMYPTL 60

Query: 61  RVGDRILVETASYLIRNPSINDIITFRDPTQQSALREENIVVKRVVAKAGDTVEVCQGCL 120
           RVGDRILVE ASY IRNPSINDIITF+DPTQQS  REENIVVKRVVAKAGDTVEV QGCL
Sbjct: 61  RVGDRILVEKASYFIRNPSINDIITFQDPTQQSGCREENIVVKRVVAKAGDTVEVFQGCL 120

Query: 121 YVNGVAKDESFLLERPMYTTKSTQIPEGHVYVLGDNRNNSYDSHIWGPLPVKNIIGRYLC 180
           YVNG+A+DESFL ERP YTTKSTQIPEGH+YVLGDNRNNSYDSHIWGPLP+KNIIGR LC
Sbjct: 121 YVNGIAQDESFLRERPTYTTKSTQIPEGHIYVLGDNRNNSYDSHIWGPLPIKNIIGRCLC 180

Query: 181 SCHKPTSK 189
           SCHKPTSK
Sbjct: 181 SCHKPTSK 188

[Close]

BLAST of Csa6G382350 vs. NCBI nr
Match: gi|502135983|ref|XP_004502521.1| (PREDICTED: chloroplast processing peptidase-like [Cicer arietinum])

HSP 1 Score: 260.8 bits (665), Expect = 1.9e-66
Identity = 128/196 (65.31%), Postives = 153/196 (78.06%), Query Frame = 1


Query: 1   MTFLRP-----FL--FYSSLRWMTFHSWGFPRWPSFDAFLRFLVLLILWSMLLEIHSIPS 60
           M+FLRP     FL  +Y SLRWM   SWG  RWP  D F R LV+L+LWS   ++  IPS
Sbjct: 1   MSFLRPSAMYNFLITYYPSLRWMPCQSWGLLRWPGLDGFFRLLVVLLLWSTFSQLFYIPS 60

Query: 61  SSMYPTLRVGDRILVETASYLIRNPSINDIITFRDPTQQSALREEN--IVVKRVVAKAGD 120
           SSMYPTLRVGDRI+VE ASY IR+P+I++I+TFRDPTQ S   E+N  + +KRVVAKAGD
Sbjct: 61  SSMYPTLRVGDRIIVEKASYYIRSPAIHEIVTFRDPTQHS---EDNTDVFIKRVVAKAGD 120

Query: 121 TVEVCQGCLYVNGVAKDESFLLERPMYTTKSTQIPEGHVYVLGDNRNNSYDSHIWGPLPV 180
           TVEV  G LYVNGVA++E F+ E P YTTK T +P+GHVYVLGDNRNNSYDSHIWGPLP+
Sbjct: 121 TVEVHHGGLYVNGVAQEEDFVAEPPTYTTKLTYVPKGHVYVLGDNRNNSYDSHIWGPLPI 180

Query: 181 KNIIGRYLCSCHKPTS 188
           KNI+GRY+  CH+PT+
Sbjct: 181 KNIVGRYVMCCHRPTN 193

[Close]

BLAST of Csa6G382350 vs. NCBI nr
Match: gi|922382129|ref|XP_013461292.1| (signal peptidase I family protein [Medicago truncatula])

HSP 1 Score: 260.4 bits (664), Expect = 2.5e-66
Identity = 124/193 (64.25%), Postives = 147/193 (76.17%), Query Frame = 1


Query: 1   MTFLRP------FLFYSSLRWMTFHSWGFPRWPSFDAFLRFLVLLILWSMLLEIHSIPSS 60
           M+FLRP       + Y S RWM   SWGF RWP  + FLR LV+ +LWS    +  IPSS
Sbjct: 1   MSFLRPSAMYNFLITYPSSRWMPCQSWGFLRWPGLEGFLRLLVVFLLWSTFSHLCYIPSS 60

Query: 61  SMYPTLRVGDRILVETASYLIRNPSINDIITFRDPTQQSALREENIVVKRVVAKAGDTVE 120
           SMYPTL VGDRI++E ASY IR+PSI+DIITFRDPTQ S    + I +KRVVAK GDTVE
Sbjct: 61  SMYPTLHVGDRIIIEKASYYIRSPSIHDIITFRDPTQHSGDNTDVIFIKRVVAKEGDTVE 120

Query: 121 VCQGCLYVNGVAKDESFLLERPMYTTKSTQIPEGHVYVLGDNRNNSYDSHIWGPLPVKNI 180
           V  G LYVNGVA++E F++E+P YTTK T +P+GHVYVLGDNRNNSYDSHIWGPLP+KNI
Sbjct: 121 VHHGGLYVNGVAQEEDFVVEKPTYTTKLTYVPKGHVYVLGDNRNNSYDSHIWGPLPMKNI 180

Query: 181 IGRYLCSCHKPTS 188
           +GRY   CH+PT+
Sbjct: 181 VGRYAMCCHRPTN 193

[Close]

BLAST of Csa6G382350 vs. NCBI nr
Match: gi|1009136661|ref|XP_015885643.1| (PREDICTED: chloroplast processing peptidase-like isoform X1 [Ziziphus jujuba])

HSP 1 Score: 255.8 bits (652), Expect = 6.1e-65
Identity = 120/191 (62.83%), Postives = 144/191 (75.39%), Query Frame = 1


Query: 1   MTFLRP------FLFYSSLRWMTFHSWGFPRWPSFDAFLRFLVLLILWSMLLEIHSIPSS 60
           M+FLRP       + Y+SL+WM   SWGF RWP FD FLR LV+ +LW+ML EI  IPSS
Sbjct: 1   MSFLRPSALSQLLITYTSLQWMPCQSWGFFRWPGFDGFLRLLVMFLLWTMLSEIRFIPSS 60

Query: 61  SMYPTLRVGDRILVETASYLIRNPSINDIITFRDPTQQSALREENIVVKRVVAKAGDTVE 120
           SMYPTLRVGDRI+VE  SY IR+P+INDI+TF DPTQ+    E N+ +KR+VAKAGD VE
Sbjct: 61  SMYPTLRVGDRIIVEKGSYYIRSPAINDIVTFWDPTQKPGDGERNVFIKRIVAKAGDWVE 120

Query: 121 VCQGCLYVNGVAKDESFLLERPMYTTKSTQIPEGHVYVLGDNRNNSYDSHIWGPLPVKNI 180
           +  G LYVNG+AKDE F+   P Y +  T +P+GHVYVLGDNRN SYDSH WGPLP+KNI
Sbjct: 121 INHGSLYVNGIAKDEDFIAGPPTYVSALTYVPKGHVYVLGDNRNKSYDSHFWGPLPIKNI 180

Query: 181 IGRYLCSCHKP 186
           IGRY+   H+P
Sbjct: 181 IGRYVMCFHRP 191

The following BLAST results are available for this feature:

BLAST of Csa6G382350 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PLSP1_ARATH	1.1e-37	49.08	Chloroplast processing peptidase OS=Arabidopsis thaliana GN=PLSP1 PE=2 SV=2	[more]
TPP2_ARATH	1.2e-33	49.66	Probable thylakoidal processing peptidase 2, chloroplastic OS=Arabidopsis thalia...	[more]
TPP1_ARATH	4.7e-33	45.39	Thylakoidal processing peptidase 1, chloroplastic OS=Arabidopsis thaliana GN=TPP...	[more]
LEP1_SYNY3	1.3e-27	44.52	Probable signal peptidase I-1 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN...	[more]
LEP2_SYNY3	1.2e-25	40.74	Probable signal peptidase I-2 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN...	[more]

BLAST of Csa6G382350 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KIU5_CUCSA	4.9e-106	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G382350 PE=4 SV=1	[more]
A0A072V0L3_MEDTR	1.7e-66	64.25	Signal peptidase I family protein OS=Medicago truncatula GN=MTR_3g088435 PE=4 SV...	[more]
I3T671_LOTJA	1.2e-64	63.21	Uncharacterized protein OS=Lotus japonicus PE=2 SV=1	[more]
A0A0D2UTI1_GOSRA	2.1e-64	60.62	Uncharacterized protein OS=Gossypium raimondii GN=B456_009G248500 PE=4 SV=1	[more]
A0A0B0NU84_GOSAR	2.1e-64	60.10	Chloroplast processing peptidase-like protein OS=Gossypium arboreum GN=F383_0620...	[more]

BLAST of Csa6G382350 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G24590.1	6.1e-39	49.08	plastidic type i signal peptidase 1	[more]
AT1G06870.1	7.0e-35	49.66	Peptidase S24/S26A/S26B/S26C family protein	[more]
AT2G30440.1	2.6e-34	45.39	thylakoid processing peptide	[more]

BLAST of Csa6G382350 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449463412\|ref\|XP_004149428.1\|	7.1e-106	100.00	PREDICTED: chloroplast processing peptidase [Cucumis sativus]	[more]
gi\|659133491\|ref\|XP_008466751.1\|	2.3e-96	90.43	PREDICTED: chloroplast processing peptidase-like [Cucumis melo]	[more]
gi\|502135983\|ref\|XP_004502521.1\|	1.9e-66	65.31	PREDICTED: chloroplast processing peptidase-like [Cicer arietinum]	[more]
gi\|922382129\|ref\|XP_013461292.1\|	2.5e-66	64.25	signal peptidase I family protein [Medicago truncatula]	[more]
gi\|1009136661\|ref\|XP_015885643.1\|	6.1e-65	62.83	PREDICTED: chloroplast processing peptidase-like isoform X1 [Ziziphus jujuba]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000223	Pept_S26A_signal_pept_1
IPR015927	Peptidase_S24_S26A/B/C
IPR019756	Pept_S26A_signal_pept_1_Ser-AS
IPR019758	Pept_S26A_signal_pept_1_CS
IPR019759	Peptidase S24/S26A/S26B

Vocabulary: **Biological Process**
Term	Definition
GO:0006508	proteolysis

Vocabulary: **Molecular Function**
Term	Definition
GO:0008236	serine-type peptidase activity

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane
GO:0016021	integral component of membrane

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane
molecular_function	GO:0008236	serine-type peptidase activity

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
CU164774	cucumber EST collection version 3.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa6G382350.1	Csa6G382350.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
CU164774	CU164774	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000223	Peptidase S26A, signal peptidase I	PRINTS	PR00727	LEADERPTASE	coord: 145..164 score: 1.3E-18coord: 44..60 score: 1.3E-18coord: 101..113 score: 1.3
IPR000223	Peptidase S26A, signal peptidase I	PANTHER	PTHR12383	PROTEASE FAMILY S26 MITOCHONDRIAL INNER MEMBRANE PROTEASE-RELATED	coord: 1..180 score: 2.9
IPR000223	Peptidase S26A, signal peptidase I	TIGRFAMs	TIGR02227	TIGR02227	coord: 34..179 score: 9.2
IPR015927	Peptidase S24/S26A/S26B/S26C	unknown	SSF51306	LexA/Signal peptidase	coord: 44..179 score: 4.81
IPR019756	Peptidase S26A, signal peptidase I, serine active site	PROSITE	PS00501	SPASE_I_1	coord: 53..60 scor
IPR019758	Peptidase S26A, signal peptidase I, conserved site	PROSITE	PS00761	SPASE_I_3	coord: 150..163 scor
IPR019759	Peptidase S24/S26A/S26B	PFAM	PF00717	Peptidase_S24	coord: 51..124 score: 4.6
None	No IPR available	PANTHER	PTHR12383:SF24	SUBFAMILY NOT NAMED	coord: 1..180 score: 2.9

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Csa6G382350	Cla013913	Watermelon (97103) v1	cuwmB467
Csa6G382350	MELO3C010646	Melon (DHL92) v3.5.1	cumeB477
Csa6G382350	ClCG08G005950	Watermelon (Charleston Gray)	cuwcgB506
Csa6G382350	Lsi08G004580	Bottle gourd (USVL1VR-Ls)	culsiB480
Csa6G382350	MELO3C010646.2	Melon (DHL92) v3.6.1	cumedB449
Csa6G382350	Cla97C08G148710	Watermelon (97103) v2	cuwmbB497
Csa6G382350	Bhi04G001489	Wax gourd	cuwgoB572
Csa6G382350	CSPI06G20110	Wild cucumber (PI 183967)	cpicuB313
Csa6G382350	Cucsa.328200	Cucumber (Gy14) v1	cgycuB466
Csa6G382350	CmoCh04G025010	Cucurbita moschata (Rifu)	cmocuB761
Csa6G382350	CmoCh15G006660	Cucurbita moschata (Rifu)	cmocuB298
Csa6G382350	Cp4.1LG01g20660	Cucurbita pepo (Zucchini)	cpecuB461
Csa6G382350	CsGy6G019580	Cucumber (Gy14) v2	cgybcuB281
Csa6G382350	Carg15741	Silver-seed gourd	carcuB0068
Csa6G382350	Carg01549	Silver-seed gourd	carcuB0851

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Csa6G382350	Cucurbita maxima (Rimu)	cmacuB310
Csa6G382350	Cucurbita maxima (Rimu)	cmacuB769
Csa6G382350	Cucurbita pepo (Zucchini)	cpecuB199