Lsi08G003780 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTGGTCAATAGAAAATTCCTTCATAATTTAGTTTCCTATAAAATCCCACCAACTTTCACATCTTGCTTCCCCACAATCCCAATTGGATACAAACAATACAAATAAGAAAGGCATGGCTCTACCAAGTGAAATCCCAGAAGAAACCCAGTTATTATTAGAAGCTGAAGAAAAGTACTTTTGGACAATTCAAAGGAACGATGATCTTTCAAACATGATCTCTAGTGATCATTTTTGTTGTCCAACAAGAAATTACAACAATAATAACAACACCAGCAGCACGGAAAGAGTGGACGACGAAAGGAAGCAGAGGCGGATGATATCGAACCGAGAATCGGCTCAAAGGTCCCGAATGAGGAAGCAAAAGCATGTGAAGGAGCTTTGGTCACAACTGGCAAGGCTATGCACTCAGAACCATGACCTTGAGGAGAAGTTGAGGTGTTTGATGGAGTCTCAGCAACGCCTTCTCCAAGAGAATGCTAGCCTTAAGCAACAAGCTTCTGGTTTTCGCCAAATCCTTAGAGATATGGAACTTGAACAGCTTGTCACACAATTTTGA ATGGTGTTTCCTATAAAATCCCACCAACTTTCACATCTTGCTTCCCCACAATCCCAATTGGATACAAACAATACAAATAAGAAAGGCATGGCTCTACCAAGTGAAATCCCAGAAGAAACCCAGTTATTATTAGAAGCTGAAGAAAAGTACTTTTGGACAATTCAAAGGAACGATGATCTTTCAAACATGATCTCTAGTGATCATTTTTGTTGTCCAACAAGAAATTACAACAATAATAACAACACCAGCAGCACGGAAAGAGTGGACGACGAAAGGAAGCAGAGGCGGATGATATCGAACCGAGAATCGGCTCAAAGGTCCCGAATGAGGAAGCAAAAGCATGTGAAGGAGCTTTGGTCACAACTGGCAAGGCTATGCACTCAGAACCATGACCTTGAGGAGAAGTTGAGGTGTTTGATGGAGTCTCAGCAACGCCTTCTCCAAGAGAATGCTAGCCTTAAGCAACAAGCTTCTGGTTTTCGCCAAATCCTTAGAGATATGGAACTTGAACAGCTTGTCACACAATTTTGA ATGGTGTTTCCTATAAAATCCCACCAACTTTCACATCTTGCTTCCCCACAATCCCAATTGGATACAAACAATACAAATAAGAAAGGCATGGCTCTACCAAGTGAAATCCCAGAAGAAACCCAGTTATTATTAGAAGCTGAAGAAAAGTACTTTTGGACAATTCAAAGGAACGATGATCTTTCAAACATGATCTCTAGTGATCATTTTTGTTGTCCAACAAGAAATTACAACAATAATAACAACACCAGCAGCACGGAAAGAGTGGACGACGAAAGGAAGCAGAGGCGGATGATATCGAACCGAGAATCGGCTCAAAGGTCCCGAATGAGGAAGCAAAAGCATGTGAAGGAGCTTTGGTCACAACTGGCAAGGCTATGCACTCAGAACCATGACCTTGAGGAGAAGTTGAGGTGTTTGATGGAGTCTCAGCAACGCCTTCTCCAAGAGAATGCTAGCCTTAAGCAACAAGCTTCTGGTTTTCGCCAAATCCTTAGAGATATGGAACTTGAACAGCTTGTCACACAATTTTGA MVFPIKSHQLSHLASPQSQLDTNNTNKKGMALPSEIPEETQLLLEAEEKYFWTIQRNDDLSNMISSDHFCCPTRNYNNNNNTSSTERVDDERKQRRMISNRESAQRSRMRKQKHVKELWSQLARLCTQNHDLEEKLRCLMESQQRLLQENASLKQQASGFRQILRDMELEQLVTQF
BLAST of Lsi08G003780 vs. Swiss-Prot
Match: BZP43_ARATH (Basic leucine zipper 43 OS=Arabidopsis thaliana GN=BZIP43 PE=1 SV=1) HSP 1 Score: 83.6 bits (205), Expect = 2.4e-15 Identity = 47/99 (47.47%), Postives = 73/99 (73.74%), Query Frame = 1
BLAST of Lsi08G003780 vs. Swiss-Prot
Match: BZIP8_ARATH (Basic leucine zipper 8 OS=Arabidopsis thaliana GN=BZIP8 PE=1 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 1.4e-10 Identity = 40/103 (38.83%), Postives = 69/103 (66.99%), Query Frame = 1
BLAST of Lsi08G003780 vs. Swiss-Prot
Match: BZIP2_ARATH (bZIP transcription factor 2 OS=Arabidopsis thaliana GN=BZIP2 PE=1 SV=1) HSP 1 Score: 53.1 bits (126), Expect = 3.5e-06 Identity = 37/92 (40.22%), Postives = 54/92 (58.70%), Query Frame = 1
BLAST of Lsi08G003780 vs. TrEMBL
Match: B9RLD3_RICCO (Ocs element-binding factor, putative OS=Ricinus communis GN=RCOM_1465160 PE=4 SV=1) HSP 1 Score: 97.8 bits (242), Expect = 1.4e-17 Identity = 63/128 (49.22%), Postives = 86/128 (67.19%), Query Frame = 1
BLAST of Lsi08G003780 vs. TrEMBL
Match: A0A0L9UTJ4_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan06g136400 PE=4 SV=1) HSP 1 Score: 97.4 bits (241), Expect = 1.8e-17 Identity = 58/106 (54.72%), Postives = 76/106 (71.70%), Query Frame = 1
BLAST of Lsi08G003780 vs. TrEMBL
Match: A0A0S3T1F4_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.10G028400 PE=4 SV=1) HSP 1 Score: 97.4 bits (241), Expect = 1.8e-17 Identity = 58/106 (54.72%), Postives = 76/106 (71.70%), Query Frame = 1
BLAST of Lsi08G003780 vs. TrEMBL
Match: B9HWS1_POPTR (BZIP family protein OS=Populus trichocarpa GN=POPTR_0010s14530g PE=4 SV=1) HSP 1 Score: 97.1 bits (240), Expect = 2.3e-17 Identity = 62/120 (51.67%), Postives = 83/120 (69.17%), Query Frame = 1
BLAST of Lsi08G003780 vs. TrEMBL
Match: A0A0B2RDI0_GLYSO (Ocs element-binding factor 1 OS=Glycine soja GN=glysoja_014730 PE=4 SV=1) HSP 1 Score: 96.7 bits (239), Expect = 3.1e-17 Identity = 60/110 (54.55%), Postives = 76/110 (69.09%), Query Frame = 1
BLAST of Lsi08G003780 vs. TAIR10
Match: AT1G13600.1 (AT1G13600.1 basic leucine-zipper 58) HSP 1 Score: 85.5 bits (210), Expect = 3.6e-17 Identity = 54/116 (46.55%), Postives = 81/116 (69.83%), Query Frame = 1
BLAST of Lsi08G003780 vs. TAIR10
Match: AT3G30530.1 (AT3G30530.1 basic leucine-zipper 42) HSP 1 Score: 85.1 bits (209), Expect = 4.7e-17 Identity = 54/114 (47.37%), Postives = 76/114 (66.67%), Query Frame = 1
BLAST of Lsi08G003780 vs. TAIR10
Match: AT5G38800.1 (AT5G38800.1 basic leucine-zipper 43) HSP 1 Score: 83.6 bits (205), Expect = 1.4e-16 Identity = 47/99 (47.47%), Postives = 73/99 (73.74%), Query Frame = 1
BLAST of Lsi08G003780 vs. TAIR10
Match: AT2G04038.1 (AT2G04038.1 basic leucine-zipper 48) HSP 1 Score: 80.5 bits (197), Expect = 1.1e-15 Identity = 49/96 (51.04%), Postives = 72/96 (75.00%), Query Frame = 1
BLAST of Lsi08G003780 vs. TAIR10
Match: AT5G15830.1 (AT5G15830.1 basic leucine-zipper 3) HSP 1 Score: 74.7 bits (182), Expect = 6.3e-14 Identity = 45/96 (46.88%), Postives = 70/96 (72.92%), Query Frame = 1
BLAST of Lsi08G003780 vs. NCBI nr
Match: gi|659089912|ref|XP_008445746.1| (PREDICTED: ocs element-binding factor 1-like [Cucumis melo]) HSP 1 Score: 186.0 bits (471), Expect = 5.5e-44 Identity = 113/140 (80.71%), Postives = 120/140 (85.71%), Query Frame = 1
BLAST of Lsi08G003780 vs. NCBI nr
Match: gi|951050878|ref|XP_014520315.1| (PREDICTED: basic leucine zipper 43 [Vigna radiata var. radiata]) HSP 1 Score: 98.6 bits (244), Expect = 1.2e-17 Identity = 59/106 (55.66%), Postives = 76/106 (71.70%), Query Frame = 1
BLAST of Lsi08G003780 vs. NCBI nr
Match: gi|255546989|ref|XP_002514552.1| (PREDICTED: basic leucine zipper 43 [Ricinus communis]) HSP 1 Score: 97.8 bits (242), Expect = 2.0e-17 Identity = 63/128 (49.22%), Postives = 86/128 (67.19%), Query Frame = 1
BLAST of Lsi08G003780 vs. NCBI nr
Match: gi|920702833|gb|KOM46058.1| (hypothetical protein LR48_Vigan06g136400 [Vigna angularis]) HSP 1 Score: 97.4 bits (241), Expect = 2.6e-17 Identity = 58/106 (54.72%), Postives = 76/106 (71.70%), Query Frame = 1
BLAST of Lsi08G003780 vs. NCBI nr
Match: gi|224111822|ref|XP_002315989.1| (bZIP family protein [Populus trichocarpa]) HSP 1 Score: 97.1 bits (240), Expect = 3.4e-17 Identity = 62/120 (51.67%), Postives = 83/120 (69.17%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: None |