ClCG08G004850 (gene) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTATTTGATTTGAAAGGTAGTCTAGTTTCCTATAAAATCCCACCAACTTTCATATCTCGCTTCCCCACCATACCATTTGGATACAACAATACAAATCAGAAAGCAATGGATCTTCCAAGTGAAATCCCAGAAGAAACCCAGTTATTATTAGGAGCTGAAGAAAAGTACTTTTGGACGATTGAAAGGAATGATCTTCAAAACATGATCTCTAGTGATCAGTTTTGTCGTCCAACAAGTAATTACAACAATAATAACAACAGGAGAAGCGCGGAAATTATGGTGGATGAAAGGAAGCAGAGGCGGATGATATCGAACCGAGAATCGGCTCGAAGGTCCCGAATGAGGAAGCAGAAGCATGTAAAGGAGCTTTGGTCTCAGCTGGCTCAGCTATGCACTCAGAACCATGACCTTGAGGAGAAGTTGAGGCATTTGATGGAGTCCCAGCAGCGCCTTCTCCAAGAGAATGCAAGCCTTAAGCAACAAGCTTCTGCTTTCCGCCAAATCCTTAGAGATATGGAACTTGAACAACTCGTCACCCAATTTTGA ATGGTATTTGATTTGAAAGGTAGTCTAGTTTCCTATAAAATCCCACCAACTTTCATATCTCGCTTCCCCACCATACCATTTGGATACAACAATACAAATCAGAAAGCAATGGATCTTCCAAGTGAAATCCCAGAAGAAACCCAGTTATTATTAGGAGCTGAAGAAAAGTACTTTTGGACGATTGAAAGGAATGATCTTCAAAACATGATCTCTAGTGATCAGTTTTGTCGTCCAACAAGTAATTACAACAATAATAACAACAGGAGAAGCGCGGAAATTATGGTGGATGAAAGGAAGCAGAGGCGGATGATATCGAACCGAGAATCGGCTCGAAGGTCCCGAATGAGGAAGCAGAAGCATGTAAAGGAGCTTTGGTCTCAGCTGGCTCAGCTATGCACTCAGAACCATGACCTTGAGGAGAAGTTGAGGCATTTGATGGAGTCCCAGCAGCGCCTTCTCCAAGAGAATGCAAGCCTTAAGCAACAAGCTTCTGCTTTCCGCCAAATCCTTAGAGATATGGAACTTGAACAACTCGTCACCCAATTTTGA ATGGTATTTGATTTGAAAGGTAGTCTAGTTTCCTATAAAATCCCACCAACTTTCATATCTCGCTTCCCCACCATACCATTTGGATACAACAATACAAATCAGAAAGCAATGGATCTTCCAAGTGAAATCCCAGAAGAAACCCAGTTATTATTAGGAGCTGAAGAAAAGTACTTTTGGACGATTGAAAGGAATGATCTTCAAAACATGATCTCTAGTGATCAGTTTTGTCGTCCAACAAGTAATTACAACAATAATAACAACAGGAGAAGCGCGGAAATTATGGTGGATGAAAGGAAGCAGAGGCGGATGATATCGAACCGAGAATCGGCTCGAAGGTCCCGAATGAGGAAGCAGAAGCATGTAAAGGAGCTTTGGTCTCAGCTGGCTCAGCTATGCACTCAGAACCATGACCTTGAGGAGAAGTTGAGGCATTTGATGGAGTCCCAGCAGCGCCTTCTCCAAGAGAATGCAAGCCTTAAGCAACAAGCTTCTGCTTTCCGCCAAATCCTTAGAGATATGGAACTTGAACAACTCGTCACCCAATTTTGA MVFDLKGSLVSYKIPPTFISRFPTIPFGYNNTNQKAMDLPSEIPEETQLLLGAEEKYFWTIERNDLQNMISSDQFCRPTSNYNNNNNRRSAEIMVDERKQRRMISNRESARRSRMRKQKHVKELWSQLAQLCTQNHDLEEKLRHLMESQQRLLQENASLKQQASAFRQILRDMELEQLVTQF
BLAST of ClCG08G004850 vs. Swiss-Prot
Match: BZP43_ARATH (Basic leucine zipper 43 OS=Arabidopsis thaliana GN=BZIP43 PE=1 SV=1) HSP 1 Score: 97.8 bits (242), Expect = 1.3e-19 Identity = 58/165 (35.15%), Postives = 92/165 (55.76%), Query Frame = 1
BLAST of ClCG08G004850 vs. Swiss-Prot
Match: BZIP8_ARATH (Basic leucine zipper 8 OS=Arabidopsis thaliana GN=BZIP8 PE=1 SV=1) HSP 1 Score: 84.7 bits (208), Expect = 1.1e-15 Identity = 41/103 (39.81%), Postives = 66/103 (64.08%), Query Frame = 1
BLAST of ClCG08G004850 vs. Swiss-Prot
Match: BZIP2_ARATH (bZIP transcription factor 2 OS=Arabidopsis thaliana GN=BZIP2 PE=1 SV=1) HSP 1 Score: 76.3 bits (186), Expect = 4.0e-13 Identity = 44/110 (40.00%), Postives = 61/110 (55.45%), Query Frame = 1
BLAST of ClCG08G004850 vs. Swiss-Prot
Match: OCS1_MAIZE (Ocs element-binding factor 1 OS=Zea mays GN=OBF1 PE=2 SV=2) HSP 1 Score: 62.0 bits (149), Expect = 7.8e-09 Identity = 34/86 (39.53%), Postives = 53/86 (61.63%), Query Frame = 1
BLAST of ClCG08G004850 vs. Swiss-Prot
Match: BZP53_ARATH (bZIP transcription factor 53 OS=Arabidopsis thaliana GN=BZIP53 PE=1 SV=1) HSP 1 Score: 62.0 bits (149), Expect = 7.8e-09 Identity = 36/90 (40.00%), Postives = 53/90 (58.89%), Query Frame = 1
BLAST of ClCG08G004850 vs. TrEMBL
Match: B9HWS1_POPTR (BZIP family protein OS=Populus trichocarpa GN=POPTR_0010s14530g PE=4 SV=1) HSP 1 Score: 119.0 bits (297), Expect = 6.0e-24 Identity = 60/106 (56.60%), Postives = 80/106 (75.47%), Query Frame = 1
BLAST of ClCG08G004850 vs. TrEMBL
Match: A0A067K8T1_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11804 PE=4 SV=1) HSP 1 Score: 118.6 bits (296), Expect = 7.8e-24 Identity = 60/105 (57.14%), Postives = 79/105 (75.24%), Query Frame = 1
BLAST of ClCG08G004850 vs. TrEMBL
Match: A0A0B2R968_GLYSO (Ocs element-binding factor 1 OS=Glycine soja GN=glysoja_030737 PE=4 SV=1) HSP 1 Score: 117.9 bits (294), Expect = 1.3e-23 Identity = 62/110 (56.36%), Postives = 83/110 (75.45%), Query Frame = 1
BLAST of ClCG08G004850 vs. TrEMBL
Match: Q0GPI4_SOYBN (BZIP transcription factor bZIP35 OS=Glycine max GN=bZIP35 PE=2 SV=1) HSP 1 Score: 117.9 bits (294), Expect = 1.3e-23 Identity = 62/110 (56.36%), Postives = 83/110 (75.45%), Query Frame = 1
BLAST of ClCG08G004850 vs. TrEMBL
Match: B9RLD3_RICCO (Ocs element-binding factor, putative OS=Ricinus communis GN=RCOM_1465160 PE=4 SV=1) HSP 1 Score: 117.9 bits (294), Expect = 1.3e-23 Identity = 59/105 (56.19%), Postives = 80/105 (76.19%), Query Frame = 1
BLAST of ClCG08G004850 vs. TAIR10
Match: AT3G30530.1 (AT3G30530.1 basic leucine-zipper 42) HSP 1 Score: 107.1 bits (266), Expect = 1.2e-23 Identity = 60/152 (39.47%), Postives = 84/152 (55.26%), Query Frame = 1
BLAST of ClCG08G004850 vs. TAIR10
Match: AT1G13600.1 (AT1G13600.1 basic leucine-zipper 58) HSP 1 Score: 104.8 bits (260), Expect = 5.9e-23 Identity = 50/96 (52.08%), Postives = 69/96 (71.88%), Query Frame = 1
BLAST of ClCG08G004850 vs. TAIR10
Match: AT2G04038.1 (AT2G04038.1 basic leucine-zipper 48) HSP 1 Score: 98.2 bits (243), Expect = 5.5e-21 Identity = 49/114 (42.98%), Postives = 79/114 (69.30%), Query Frame = 1
BLAST of ClCG08G004850 vs. TAIR10
Match: AT5G38800.1 (AT5G38800.1 basic leucine-zipper 43) HSP 1 Score: 97.8 bits (242), Expect = 7.2e-21 Identity = 58/165 (35.15%), Postives = 92/165 (55.76%), Query Frame = 1
BLAST of ClCG08G004850 vs. TAIR10
Match: AT5G15830.1 (AT5G15830.1 basic leucine-zipper 3) HSP 1 Score: 94.7 bits (234), Expect = 6.1e-20 Identity = 48/98 (48.98%), Postives = 69/98 (70.41%), Query Frame = 1
BLAST of ClCG08G004850 vs. NCBI nr
Match: gi|659089912|ref|XP_008445746.1| (PREDICTED: ocs element-binding factor 1-like [Cucumis melo]) HSP 1 Score: 241.9 bits (616), Expect = 8.7e-61 Identity = 136/178 (76.40%), Postives = 144/178 (80.90%), Query Frame = 1
BLAST of ClCG08G004850 vs. NCBI nr
Match: gi|224111822|ref|XP_002315989.1| (bZIP family protein [Populus trichocarpa]) HSP 1 Score: 119.0 bits (297), Expect = 8.5e-24 Identity = 60/106 (56.60%), Postives = 80/106 (75.47%), Query Frame = 1
BLAST of ClCG08G004850 vs. NCBI nr
Match: gi|951050878|ref|XP_014520315.1| (PREDICTED: basic leucine zipper 43 [Vigna radiata var. radiata]) HSP 1 Score: 118.6 bits (296), Expect = 1.1e-23 Identity = 61/107 (57.01%), Postives = 81/107 (75.70%), Query Frame = 1
BLAST of ClCG08G004850 vs. NCBI nr
Match: gi|802657484|ref|XP_012080573.1| (PREDICTED: basic leucine zipper 43 [Jatropha curcas]) HSP 1 Score: 118.6 bits (296), Expect = 1.1e-23 Identity = 60/105 (57.14%), Postives = 79/105 (75.24%), Query Frame = 1
BLAST of ClCG08G004850 vs. NCBI nr
Match: gi|747049662|ref|XP_011070884.1| (PREDICTED: basic leucine zipper 43-like [Sesamum indicum]) HSP 1 Score: 118.2 bits (295), Expect = 1.5e-23 Identity = 67/159 (42.14%), Postives = 98/159 (61.64%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: None |