Lsi07G008750 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi07G008750
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Ubiquitin-conjugating enzyme E2 36
Location	chr07 : 9944412 .. 9948418 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAAGATACAAATAATTGGGTCGTGCATCAGAACCTTCTTACCTTCAAAGCTTCCTTTCAATTCTTTATAATCTAGAGAGAGGAAAGCGTCTCCTCTCCCATTTCTCTCTCTTCCTTTCCTCTAAACCCTATCGTAACCTCTCAATCTTCCTTCCAATGGCGAACAGTAATCTTCCCCGAAGAATCATCAAGGTAACATCCCCGATCCTCTTCACGATCTCATTTCTTTTTTTCCCGATCCCTCTGTCTCTTTGATTTATTCTTTTGGTCAAGAAATCGTCTCCTTTCGCTGTTTGGATTTCGGTTATTCTTTTAGATTTATGTGTTAGTAGAATTGGGTTCTTGTTGCTACTGGATTTGATTTCCCCCCATCCTTTTTGTGATCAATCGCAGGAAACTCAGCGTCTCCTCAGTGAACCAGGTGAGTTTTGGATTCTTTTCGAGGGTGGGGGTTATTTGATTCCTGATCTTGTTACTGGGAGTTATTTGTTATTTGGGCCTTGGTTGTTGTTTGATGGCTTTTACGGTTTGGATTAATTCGACGGATAATTATGAAGCCGAAGTTTATTTTGATTTATTTGATCTCGATCTTTGATATGTTGTGTGATTTTAGCCCCTGGGATTAGTGCCTCGCCGTCAGAAGATAACATGCGATATTTTAACGTCATGATTCTTGGCCCGACTCAGTCACCCTATGAAGGTAAATTACTTGACAGTATGTTGTGGTTGTGGGAGCGTCAAATTATTTTGACATATGAATGGCTATAGAACCAACTATGTATTTAAGTGTAGATTCGCCTAAGTTTTATCGGTATTGGTCTTTGAAAATGACATTCACAGTGAAGATCAACCATGGGATTATCTTTTACTCAATGAAAAAGATATCTTATCTTCCTTTCTAACTTTGGTTTTGTGTCTACTGAAGTAATGAAAATGGGGAAATTTTAATTGTAATTTCAGGAAATACCTCTCTTTTTCCTTTATGCGCTATGGTGCAACAGTAGAATATTACTCTTCTTGGCTGCTAGACTCAGAAACATACTTGCTTACATTCTACTTAACATGGAATAAAAGTAATTTAGAGACGTAATCTGATTATCATTTCACTGATTTTATTGAATAATGTTATATGTATTCCTTTGTGTTCCTTTTCTCCTGACCCTTTGTCAAATCTATTGTCGTTAGTCTATTTCTATATGTTGTTATGTGCATATTTGTCCTGACTTCAAAGTACTTTGCAGGAGGAGTTTTCAAGTTGGAACTATTTTTACCTGAAGAATATCCTATGGCTGCTCCCAAGGTGATTTGTAATTCTTTCCTTCTGAGCTTATTAGATAAATTTTACTTTCATTTCTTCCACTAATATTCTTAAAAGGAAGTAGTATTTTTTTTTCATTAAAAGCAAAAAAGTATTAACAGAAGTATCCAGTAAAAATCATAGGGCTAATAGGGGAGCTCCAAATACTGTTCAAGATCATTTAGAACTTCTTACCCCAAATGTGCTGTTAAAATTCTCTTATACTTATTTAGCTACTTATATTTGCTTGTATTTACTTCTTGAATTATGATTTCACTTATGCATCGCCAGGGTGGTAAAACTAAAAGCTTCATCAGATACTAGATCTGCCATCATTATAATATTCTCTGTCCCTTTCGTTTCATCCCCCCTCTCAAGGGTTTCCTATCTTGCACTGATGCAACATAAAAAGATCAGAAGCCATCATAGTTTACTTTACATACACGTAGGTTTTTCTATTTCACGAATCATGATATTGACAATATAACTCAATTCTGGTTGATCTATGAAACACATGGGAGCAAATTGATACTACCTGAAGGGAGTTTTTGGTAGGGAGATCCTTACGGTTGGAGATGTAGTAGCTTATTTATGACTTGCTTTCTCAGGCATAGGTTCATAGTTTTGAAAGAATGAGAGGAAACATGTTTGTCTGGTTCTTGCTAGAGATCCAGTTGTGTGGGATGAAATTCATGGCAAACTGTTTTTGGCAATTGTTGCAAACTTCTTCCTTTTCTCATTTTGCATAGAAAACCAACTTTCATGAAGAAGATGAAAGAACAAAATACAAGGAGAGGCCCACAAAAATAAGGGCCTAAACGGAACAGGGGAAGCATCCCTCAGAACATTTACAAAATCGACCCCCCAAAGCATCCCCCAAACTTGTAATCCAATTAGGCTAGCGTTTTCTTTTTCCATTCCTGTAGAATAAATCAAACTAACTACTTTTATTTTTATTTTTGAAGTTTCTATCATTAATTCTTGTAGAATGTACGTAGTGATGTAAGTATGCCTGAAAGTACTTTATTTTCTTAGCTTATGTATGGAAAGTATTTGTCTGCCTGACTGGACTGTCATGGAAGGGAATAAGCTGTTCATAGATTTAATAATTTGCTCCATACTGACGATAATTCAGTTATCATTCGTTATTCTTTATTTTTTGTAGTACATGTAGTCATGTATTCAGTAGAGTGGGGTTGTATATCTGGTTTTGTTTTATCTTATTTTGTGTCAAACCTGTTGATAGAGGGGGGGTTATGCCTGAAAGGCTGAACAATTGACACTCATTACTCATAAGCTAACTAATTTAACTTGAGTGGTTAATCTTGGTCTGTGTCTTTTGCGTACTATTCTTATAAATGGAAAATTGATCCACTCAGAAAAGAGATGTAAAACCAGGGAAATGTTTAAGCAACGTCAAACAATCTTTTTTCGAAGAGTTTAATTTATTGCTCCTTGATGTCCCATAACTGCAGATTCTGTATTTAGGTACACTAAGTGGTCCTTTTGGAAGTTAATGAAACCTTTGATTGCCTCCACCACCATCTTTTCCCCTTCCTCTGTTTTCTTTTCCATTTTCACTTATACATTTTCCTTTTTTTGTGTGATTATTTTTTGTGGTGCAGGTTCGATTTCTCACAAAGATTTATCATCCGAATATTGACAAGGTATGTGTCTACTTGTGTAGTTCTTATTGCCACCCTCACCAACATGCTGCAGTTTGGTTATTGATGGTTTGACTTTCTGTAATTAAGCTTGGGAGGATATGCCTTGATATTCTGAAAGACAAATGGAGTCCAGCTCTACAGATACGAACTGTACTTTTGAGGTATTACAATTACAATGTTAGATGTGATTTTTCAGTGACTGCATATCAGCTTTGAACATTTTGGTCATTTCCTTGGGAATATTTATCTTTCTACAATAATTCCTATAATTATACAAAAATTGAAGAAATTCTGTTACTAGTGGCATCCATTTCTTCTCTTCTTGTTCTACGTCCCCTTTCTATGAAATTTTTTGACTAACAGTTACCTTTTCCATCACTTTCTGTCAGTATTCAAGCACTTCTAAGTGCTCCAAACCCAGATGATCCACTATCCGAGAACATTGCCAAACATTGGAAAACAAATGAGGCAGAAGCTGTTGAAACAGGTGAGTTGGTTTAAATCATTGTTTTCTTAAGCTTTTTTCTTAATTAAACTTTTGTAGTCTTAGTTTAAGCCTTGTGTCAATTTGGGTCCTCTGTTCTTAATAGTTCTAATGTCATCATTTAGGTATTAATTAAGGCTTGTTCTTGACGTCTCTTTAGTTGAGGGGTTGTGAATGAGGTAAGATGAGATGGCATGAGGTGGTATTCGATTTCATCGACTACGGGGGACTGAGTATTATTTGGGTTGAAAGCTAATGAATTGAATTGAGTTTTAAGGGCAGGGTTTAGATCTTTTATGTCATATAAAAACAGAAAAGGACATTAGGGGAAAAGGGAGGGAGGGGCACCGTCGGGGGAAGGGATATTTGTCGGAGAAAATTGCACAACTGCCCCATTTTGGAGGCTCAAAATGAAAAATGCTCCACTTTTTAAAAACAATGGTAATTGACATTCGTCATATCTATGTGAAGTTATGAATTTGCCACTGAACACCAGAGAGTGAGAGTGCAAGAGCGAGAGTAAGAGAGCGAGACCGTGAGAGAAAGAAAGCGTGTGCAA

mRNA sequence

GAAAGATACAAATAATTGGGTCGTGCATCAGAACCTTCTTACCTTCAAAGCTTCCTTTCAATTCTTTATAATCTAGAGAGAGGAAAGCGTCTCCTCTCCCATTTCTCTCTCTTCCTTTCCTCTAAACCCTATCGTAACCTCTCAATCTTCCTTCCAATGGCGAACAGTAATCTTCCCCGAAGAATCATCAAGGAAACTCAGCGTCTCCTCAGTGAACCAGGTGAGTTTTGGATTCTTTTCGAGGGTGGGGGTTATTTGATTCCTGATCTTGTTACTGGGAGTTATTTGTTATTTGGGCCTTGGTTGTTGTTTGATGGCTTTTACGCCCCTGGGATTAGTGCCTCGCCGTCAGAAGATAACATGCGATATTTTAACGTCATGATTCTTGGCCCGACTCAGTCACCCTATGAAGGAGGAGTTTTCAAGTTGGAACTATTTTTACCTGAAGAATATCCTATGGCTGCTCCCAAGGTTCGATTTCTCACAAAGATTTATCATCCGAATATTGACAAGCTTGGGAGGATATGCCTTGATATTCTGAAAGACAAATGGAGTCCAGCTCTACAGATACGAACTGTACTTTTGAGTATTCAAGCACTTCTAAGTGCTCCAAACCCAGATGATCCACTATCCGAGAACATTGCCAAACATTGGAAAACAAATGAGGCAGAAGCTGTTGAAACAGGTGAGTTGGTTTAAATCATTGTTTTCTTAAGCTTTTTTCTTAATTAAACTTTTGTAGTCTTAGTTTAAGCCTTGTGTCAATTTGGGTCCTCTGTTCTTAATAGTTCTAATGTCATCATTTAGGTATTAATTAAGGCTTGTTCTTGACGTCTCTTTAGTTGAGGGGTTGTGAATGAGGTAAGATGAGATGGCATGAGGTGGTATTCGATTTCATCGACTACGGGGGACTGAGTATTATTTGGGTTGAAAGCTAATGAATTGAATTGAGTTTTAAGGGCAGGGTTTAGATCTTTTATGTCATATAAAAACAGAAAAGGACATTAGGGGAAAAGGGAGGGAGGGGCACCGTCGGGGGAAGGGATATTTGTCGGAGAAAATTGCACAACTGCCCCATTTTGGAGGCTCAAAATGAAAAATGCTCCACTTTTTAAAAACAATGGTAATTGACATTCGTCATATCTATGTGAAGTTATGAATTTGCCACTGAACACCAGAGAGTGAGAGTGCAAGAGCGAGAGTAAGAGAGCGAGACCGTGAGAGAAAGAAAGCGTGTGCAA

Coding sequence (CDS)

ATGGCGAACAGTAATCTTCCCCGAAGAATCATCAAGGAAACTCAGCGTCTCCTCAGTGAACCAGGTGAGTTTTGGATTCTTTTCGAGGGTGGGGGTTATTTGATTCCTGATCTTGTTACTGGGAGTTATTTGTTATTTGGGCCTTGGTTGTTGTTTGATGGCTTTTACGCCCCTGGGATTAGTGCCTCGCCGTCAGAAGATAACATGCGATATTTTAACGTCATGATTCTTGGCCCGACTCAGTCACCCTATGAAGGAGGAGTTTTCAAGTTGGAACTATTTTTACCTGAAGAATATCCTATGGCTGCTCCCAAGGTTCGATTTCTCACAAAGATTTATCATCCGAATATTGACAAGCTTGGGAGGATATGCCTTGATATTCTGAAAGACAAATGGAGTCCAGCTCTACAGATACGAACTGTACTTTTGAGTATTCAAGCACTTCTAAGTGCTCCAAACCCAGATGATCCACTATCCGAGAACATTGCCAAACATTGGAAAACAAATGAGGCAGAAGCTGTTGAAACAGGTGAGTTGGTTTAA

Protein sequence

MANSNLPRRIIKETQRLLSEPGEFWILFEGGGYLIPDLVTGSYLLFGPWLLFDGFYAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETGELV

Homology

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BLAST of Lsi07G008750 vs. Swiss-Prot
Match: UBC35_ARATH (Ubiquitin-conjugating enzyme E2 35 OS=Arabidopsis thaliana GN=UBC35 PE=1 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 5.2e-66
Identity = 134/178 (75.28%), Postives = 137/178 (76.97%), Query Frame = 1


Query: 1   MANSNLPRRIIKETQRLLSEPGEFWILFEGGGYLIPDLVTGSYLLFGPWLLFDGFYAPGI 60
           MANSNLPRRIIKE                              LL  P        APGI
Sbjct: 1   MANSNLPRRIIKE---------------------------TQRLLSEP--------APGI 60

Query: 61  SASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKL 120
           SASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKL
Sbjct: 61  SASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKL 120

Query: 121 GRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETGE 179
           GRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWK+NEAEAV+T +
Sbjct: 121 GRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKSNEAEAVDTAK 143

[Close]

BLAST of Lsi07G008750 vs. Swiss-Prot
Match: UBC36_ARATH (Ubiquitin-conjugating enzyme E2 36 OS=Arabidopsis thaliana GN=UBC36 PE=1 SV=1)

HSP 1 Score: 251.5 bits (641), Expect = 6.8e-66
Identity = 134/178 (75.28%), Postives = 137/178 (76.97%), Query Frame = 1


Query: 1   MANSNLPRRIIKETQRLLSEPGEFWILFEGGGYLIPDLVTGSYLLFGPWLLFDGFYAPGI 60
           MANSNLPRRIIKE                              LL  P        APGI
Sbjct: 1   MANSNLPRRIIKE---------------------------TQRLLSEP--------APGI 60

Query: 61  SASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKL 120
           SASPSE+NMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKL
Sbjct: 61  SASPSEENMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKL 120

Query: 121 GRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETGE 179
           GRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWK+NEAEAVET +
Sbjct: 121 GRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKSNEAEAVETAK 143

[Close]

BLAST of Lsi07G008750 vs. Swiss-Prot
Match: UBC13_CAEEL (Ubiquitin-conjugating enzyme E2 13 OS=Caenorhabditis elegans GN=ubc-13 PE=1 SV=2)

HSP 1 Score: 213.8 bits (543), Expect = 1.6e-54
Identity = 99/121 (81.82%), Postives = 111/121 (91.74%), Query Frame = 1


Query: 58  PGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNI 117
           PGISA+P E N RYF+VMI GP  SP+ GGVFKLELFLPEEYPMAAPKVRF+TKIYHPNI
Sbjct: 22  PGISANPDESNARYFHVMIAGPDDSPFAGGVFKLELFLPEEYPMAAPKVRFMTKIYHPNI 81

Query: 118 DKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETG 177
           DKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNP+DPL+ ++A+ WKTNEAEA++T 
Sbjct: 82  DKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPEDPLATDVAEQWKTNEAEAIKTA 141

Query: 178 E 179
           +
Sbjct: 142 K 142

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BLAST of Lsi07G008750 vs. Swiss-Prot
Match: UBE2N_PONAB (Ubiquitin-conjugating enzyme E2 N OS=Pongo abelii GN=UBE2N PE=2 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 3.5e-54
Identity = 97/119 (81.51%), Postives = 108/119 (90.76%), Query Frame = 1


Query: 58  PGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNI 117
           PGI A P E N RYF+V+I GP  SP+EGG FKLELFLPEEYPMAAPKVRF+TKIYHPN+
Sbjct: 21  PGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNV 80

Query: 118 DKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVET 177
           DKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPL+ ++A+ WKTNEA+A+ET
Sbjct: 81  DKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQWKTNEAQAIET 139

[Close]

BLAST of Lsi07G008750 vs. Swiss-Prot
Match: UBE2N_MOUSE (Ubiquitin-conjugating enzyme E2 N OS=Mus musculus GN=Ube2n PE=1 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 3.5e-54
Identity = 97/119 (81.51%), Postives = 108/119 (90.76%), Query Frame = 1


Query: 58  PGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNI 117
           PGI A P E N RYF+V+I GP  SP+EGG FKLELFLPEEYPMAAPKVRF+TKIYHPN+
Sbjct: 21  PGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNV 80

Query: 118 DKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVET 177
           DKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPL+ ++A+ WKTNEA+A+ET
Sbjct: 81  DKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQWKTNEAQAIET 139

[Close]

BLAST of Lsi07G008750 vs. TrEMBL
Match: F4I615_ARATH (Ubiquitin-conjugating enzyme E2 36 OS=Arabidopsis thaliana GN=UBC36 PE=3 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 2.2e-71
Identity = 141/178 (79.21%), Postives = 146/178 (82.02%), Query Frame = 1


Query: 1   MANSNLPRRIIKETQRLLSEPGEFWILFEGGGYLIPDLVTGSYLLFGPWLLFDGFYAPGI 60
           MANSNLPRRIIKETQRLLSEPG F   F+                           +PGI
Sbjct: 1   MANSNLPRRIIKETQRLLSEPGNFITSFDP--------------------------SPGI 60

Query: 61  SASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKL 120
           SASPSE+NMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKL
Sbjct: 61  SASPSEENMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKL 120

Query: 121 GRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETGE 179
           GRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWK+NEAEAVET +
Sbjct: 121 GRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKSNEAEAVETAK 152

[Close]

BLAST of Lsi07G008750 vs. TrEMBL
Match: A0A0D2SFU0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G173200 PE=3 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 8.1e-66
Identity = 137/179 (76.54%), Postives = 139/179 (77.65%), Query Frame = 1


Query: 1   MANSNLPRRIIKETQRLLSEPGEFWILFEGGGYLIPDLVTGSYLLFGPWLLFDGFYAPGI 60
           MANSNLPRRIIKE                              LL  P        APGI
Sbjct: 1   MANSNLPRRIIKE---------------------------TQRLLSEP--------APGI 60

Query: 61  SASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKL 120
           SASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKL
Sbjct: 61  SASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKL 120

Query: 121 GRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETGEL 180
           GRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETG++
Sbjct: 121 GRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETGKI 144

[Close]

BLAST of Lsi07G008750 vs. TrEMBL
Match: A0A061F987_THECC (Ubiquitin-conjugating enzyme 36 isoform 2 OS=Theobroma cacao GN=TCM_031769 PE=3 SV=1)

HSP 1 Score: 256.9 bits (655), Expect = 1.8e-65
Identity = 137/177 (77.40%), Postives = 137/177 (77.40%), Query Frame = 1


Query: 1   MANSNLPRRIIKETQRLLSEPGEFWILFEGGGYLIPDLVTGSYLLFGPWLLFDGFYAPGI 60
           MANSNLPRRIIKE                              LL  P        APGI
Sbjct: 52  MANSNLPRRIIKE---------------------------TQRLLSEP--------APGI 111

Query: 61  SASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKL 120
           SASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKL
Sbjct: 112 SASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKL 171

Query: 121 GRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETG 178
           GRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETG
Sbjct: 172 GRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETG 193

[Close]

BLAST of Lsi07G008750 vs. TrEMBL
Match: A0A0D2Q0K6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G042900 PE=3 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 4.0e-65
Identity = 136/178 (76.40%), Postives = 138/178 (77.53%), Query Frame = 1


Query: 1   MANSNLPRRIIKETQRLLSEPGEFWILFEGGGYLIPDLVTGSYLLFGPWLLFDGFYAPGI 60
           MANSNLPRRIIKE                              LL  P        APGI
Sbjct: 1   MANSNLPRRIIKE---------------------------TQRLLSEP--------APGI 60

Query: 61  SASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKL 120
           +ASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKL
Sbjct: 61  NASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKL 120

Query: 121 GRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETGE 179
           GRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETG+
Sbjct: 121 GRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETGK 143

[Close]

BLAST of Lsi07G008750 vs. TrEMBL
Match: E2CW93_CUCSA (Putative ubiquitin-conjugating enzyme OS=Cucumis sativus GN=UBC13 PE=2 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 9.0e-65
Identity = 136/178 (76.40%), Postives = 137/178 (76.97%), Query Frame = 1


Query: 1   MANSNLPRRIIKETQRLLSEPGEFWILFEGGGYLIPDLVTGSYLLFGPWLLFDGFYAPGI 60
           MANSNLPRRIIKE                              LL  P        APGI
Sbjct: 1   MANSNLPRRIIKE---------------------------TQRLLSEP--------APGI 60

Query: 61  SASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKL 120
           SASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKL
Sbjct: 61  SASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKL 120

Query: 121 GRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETGE 179
           GRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVET +
Sbjct: 121 GRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAK 143

[Close]

BLAST of Lsi07G008750 vs. TAIR10
Match: AT1G16890.3 (AT1G16890.3 ubiquitin-conjugating enzyme 36)

HSP 1 Score: 276.6 bits (706), Expect = 1.1e-74
Identity = 141/178 (79.21%), Postives = 146/178 (82.02%), Query Frame = 1


Query: 1   MANSNLPRRIIKETQRLLSEPGEFWILFEGGGYLIPDLVTGSYLLFGPWLLFDGFYAPGI 60
           MANSNLPRRIIKETQRLLSEPG F   F+                           +PGI
Sbjct: 1   MANSNLPRRIIKETQRLLSEPGNFITSFDP--------------------------SPGI 60

Query: 61  SASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKL 120
           SASPSE+NMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKL
Sbjct: 61  SASPSEENMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKL 120

Query: 121 GRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETGE 179
           GRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWK+NEAEAVET +
Sbjct: 121 GRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKSNEAEAVETAK 152

[Close]

BLAST of Lsi07G008750 vs. TAIR10
Match: AT1G78870.1 (AT1G78870.1 ubiquitin-conjugating enzyme 35)

HSP 1 Score: 247.3 bits (630), Expect = 7.3e-66
Identity = 134/179 (74.86%), Postives = 137/179 (76.54%), Query Frame = 1


Query: 1   MANSNLPRRIIKETQRLLSEPGEFWILFEGGGYLIPDLVTGSYLLFGPWLLFDGFYAPGI 60
           MANSNLPRRIIKE                              LL  P        APGI
Sbjct: 1   MANSNLPRRIIKE---------------------------TQRLLSEP--------APGI 60

Query: 61  SASPSEDNMRYFNVMILGPTQSPYEG-GVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDK 120
           SASPSEDNMRYFNVMILGPTQSPYEG GVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDK
Sbjct: 61  SASPSEDNMRYFNVMILGPTQSPYEGRGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDK 120

Query: 121 LGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETGE 179
           LGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWK+NEAEAV+T +
Sbjct: 121 LGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKSNEAEAVDTAK 144

[Close]

BLAST of Lsi07G008750 vs. TAIR10
Match: AT2G16740.1 (AT2G16740.1 ubiquitin-conjugating enzyme 29)

HSP 1 Score: 130.6 bits (327), Expect = 9.9e-31
Identity = 60/112 (53.57%), Postives = 80/112 (71.43%), Query Frame = 1


Query: 61  SASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKL 120
           SA P+ ++M ++   I+GP +SPY GGVF + +  P +YP   PKV F TK++HPNI+  
Sbjct: 22  SAGPTGEDMFHWQATIMGPNESPYSGGVFLVNIHFPPDYPFKPPKVVFRTKVFHPNINSN 81

Query: 121 GRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAE 173
           G ICLDILKD+WSPAL I  VLLSI +LL+ PNPDDPL   IA  +KT++ +
Sbjct: 82  GNICLDILKDQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHIYKTDKTK 133

[Close]

BLAST of Lsi07G008750 vs. TAIR10
Match: AT3G08690.1 (AT3G08690.1 ubiquitin-conjugating enzyme 11)

HSP 1 Score: 130.2 bits (326), Expect = 1.3e-30
Identity = 61/116 (52.59%), Postives = 80/116 (68.97%), Query Frame = 1


Query: 61  SASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKL 120
           SA P  ++M ++   I+GP +SPY GGVF + +  P +YP   PKV F TK+YHPNI+  
Sbjct: 22  SAGPVAEDMFHWQATIMGPPESPYAGGVFLVSIHFPPDYPFKPPKVSFKTKVYHPNINSN 81

Query: 121 GRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVET 177
           G ICLDILK++WSPAL I  VLLSI +LL+ PNPDDPL   IA  +KT+ ++   T
Sbjct: 82  GSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKYEST 137

[Close]

BLAST of Lsi07G008750 vs. TAIR10
Match: AT5G41700.4 (AT5G41700.4 ubiquitin conjugating enzyme 8)

HSP 1 Score: 129.0 bits (323), Expect = 2.9e-30
Identity = 60/113 (53.10%), Postives = 79/113 (69.91%), Query Frame = 1


Query: 60  ISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDK 119
           I A P  ++M ++   I+GP +SPY GGVF + +  P +YP   PKV F TK++HPNI+ 
Sbjct: 22  IFAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINS 81

Query: 120 LGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAE 173
            G ICLDILK++WSPAL I  VLLSI +LL+ PNPDDPL   IA  +KT+ A+
Sbjct: 82  NGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAK 134

[Close]

BLAST of Lsi07G008750 vs. NCBI nr
Match: gi|334182638|ref|NP_001185017.1| (ubiquitin-conjugating enzyme E2 36 [Arabidopsis thaliana])

HSP 1 Score: 276.6 bits (706), Expect = 3.2e-71
Identity = 141/178 (79.21%), Postives = 146/178 (82.02%), Query Frame = 1


Query: 1   MANSNLPRRIIKETQRLLSEPGEFWILFEGGGYLIPDLVTGSYLLFGPWLLFDGFYAPGI 60
           MANSNLPRRIIKETQRLLSEPG F   F+                           +PGI
Sbjct: 1   MANSNLPRRIIKETQRLLSEPGNFITSFDP--------------------------SPGI 60

Query: 61  SASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKL 120
           SASPSE+NMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKL
Sbjct: 61  SASPSEENMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKL 120

Query: 121 GRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETGE 179
           GRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWK+NEAEAVET +
Sbjct: 121 GRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKSNEAEAVETAK 152

[Close]

BLAST of Lsi07G008750 vs. NCBI nr
Match: gi|823217102|ref|XP_012441222.1| (PREDICTED: ubiquitin-conjugating enzyme E2 36-like isoform X1 [Gossypium raimondii])

HSP 1 Score: 260.0 bits (663), Expect = 3.1e-66
Identity = 141/180 (78.33%), Postives = 147/180 (81.67%), Query Frame = 1


Query: 1   MANSNLPRRIIKE--TQRLLSEPGEFWILFEGGGYLIPDLVTGSYLLFGPWLLFDGFYAP 60
           MAN+NLPRRIIK   +  LLS  G   I F     L+  L+    L     LL +   AP
Sbjct: 1   MANTNLPRRIIKVPFSISLLSFSGFLHIAFIA---LLFTLLMNQKLQETQRLLSEP--AP 60

Query: 61  GISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNID 120
           GISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPM APKVRFLTKIYHPNID
Sbjct: 61  GISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMTAPKVRFLTKIYHPNID 120

Query: 121 KLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETGE 179
           KLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVET +
Sbjct: 121 KLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAK 175

[Close]

BLAST of Lsi07G008750 vs. NCBI nr
Match: gi|763815190|gb|KJB82042.1| (hypothetical protein B456_013G173200 [Gossypium raimondii])

HSP 1 Score: 258.1 bits (658), Expect = 1.2e-65
Identity = 137/179 (76.54%), Postives = 139/179 (77.65%), Query Frame = 1


Query: 1   MANSNLPRRIIKETQRLLSEPGEFWILFEGGGYLIPDLVTGSYLLFGPWLLFDGFYAPGI 60
           MANSNLPRRIIKE                              LL  P        APGI
Sbjct: 1   MANSNLPRRIIKE---------------------------TQRLLSEP--------APGI 60

Query: 61  SASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKL 120
           SASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKL
Sbjct: 61  SASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKL 120

Query: 121 GRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETGEL 180
           GRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETG++
Sbjct: 121 GRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETGKI 144

[Close]

BLAST of Lsi07G008750 vs. NCBI nr
Match: gi|590610106|ref|XP_007021722.1| (Ubiquitin-conjugating enzyme 36 isoform 2 [Theobroma cacao])

HSP 1 Score: 256.9 bits (655), Expect = 2.6e-65
Identity = 137/177 (77.40%), Postives = 137/177 (77.40%), Query Frame = 1


Query: 1   MANSNLPRRIIKETQRLLSEPGEFWILFEGGGYLIPDLVTGSYLLFGPWLLFDGFYAPGI 60
           MANSNLPRRIIKE                              LL  P        APGI
Sbjct: 52  MANSNLPRRIIKE---------------------------TQRLLSEP--------APGI 111

Query: 61  SASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKL 120
           SASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKL
Sbjct: 112 SASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKL 171

Query: 121 GRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETG 178
           GRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETG
Sbjct: 172 GRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETG 193

[Close]

BLAST of Lsi07G008750 vs. NCBI nr
Match: gi|763745450|gb|KJB12889.1| (hypothetical protein B456_002G042900 [Gossypium raimondii])

HSP 1 Score: 255.8 bits (652), Expect = 5.8e-65
Identity = 136/178 (76.40%), Postives = 138/178 (77.53%), Query Frame = 1


Query: 1   MANSNLPRRIIKETQRLLSEPGEFWILFEGGGYLIPDLVTGSYLLFGPWLLFDGFYAPGI 60
           MANSNLPRRIIKE                              LL  P        APGI
Sbjct: 1   MANSNLPRRIIKE---------------------------TQRLLSEP--------APGI 60

Query: 61  SASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKL 120
           +ASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKL
Sbjct: 61  NASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKL 120

Query: 121 GRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETGE 179
           GRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETG+
Sbjct: 121 GRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETGK 143

The following BLAST results are available for this feature:

BLAST of Lsi07G008750 vs. Swiss-Prot


Match Name	E-value	Identity	Description
UBC35_ARATH	5.2e-66	75.28	Ubiquitin-conjugating enzyme E2 35 OS=Arabidopsis thaliana GN=UBC35 PE=1 SV=1	[more]
UBC36_ARATH	6.8e-66	75.28	Ubiquitin-conjugating enzyme E2 36 OS=Arabidopsis thaliana GN=UBC36 PE=1 SV=1	[more]
UBC13_CAEEL	1.6e-54	81.82	Ubiquitin-conjugating enzyme E2 13 OS=Caenorhabditis elegans GN=ubc-13 PE=1 SV=2	[more]
UBE2N_PONAB	3.5e-54	81.51	Ubiquitin-conjugating enzyme E2 N OS=Pongo abelii GN=UBE2N PE=2 SV=1	[more]
UBE2N_MOUSE	3.5e-54	81.51	Ubiquitin-conjugating enzyme E2 N OS=Mus musculus GN=Ube2n PE=1 SV=1	[more]

BLAST of Lsi07G008750 vs. TrEMBL


Match Name	E-value	Identity	Description
F4I615_ARATH	2.2e-71	79.21	Ubiquitin-conjugating enzyme E2 36 OS=Arabidopsis thaliana GN=UBC36 PE=3 SV=1	[more]
A0A0D2SFU0_GOSRA	8.1e-66	76.54	Uncharacterized protein OS=Gossypium raimondii GN=B456_013G173200 PE=3 SV=1	[more]
A0A061F987_THECC	1.8e-65	77.40	Ubiquitin-conjugating enzyme 36 isoform 2 OS=Theobroma cacao GN=TCM_031769 PE=3 ...	[more]
A0A0D2Q0K6_GOSRA	4.0e-65	76.40	Uncharacterized protein OS=Gossypium raimondii GN=B456_002G042900 PE=3 SV=1	[more]
E2CW93_CUCSA	9.0e-65	76.40	Putative ubiquitin-conjugating enzyme OS=Cucumis sativus GN=UBC13 PE=2 SV=1	[more]

BLAST of Lsi07G008750 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G16890.3	1.1e-74	79.21	ubiquitin-conjugating enzyme 36	[more]
AT1G78870.1	7.3e-66	74.86	ubiquitin-conjugating enzyme 35	[more]
AT2G16740.1	9.9e-31	53.57	ubiquitin-conjugating enzyme 29	[more]
AT3G08690.1	1.3e-30	52.59	ubiquitin-conjugating enzyme 11	[more]
AT5G41700.4	2.9e-30	53.10	ubiquitin conjugating enzyme 8	[more]

BLAST of Lsi07G008750 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|334182638\|ref\|NP_001185017.1\|	3.2e-71	79.21	ubiquitin-conjugating enzyme E2 36 [Arabidopsis thaliana]	[more]
gi\|823217102\|ref\|XP_012441222.1\|	3.1e-66	78.33	PREDICTED: ubiquitin-conjugating enzyme E2 36-like isoform X1 [Gossypium raimond...	[more]
gi\|763815190\|gb\|KJB82042.1\|	1.2e-65	76.54	hypothetical protein B456_013G173200 [Gossypium raimondii]	[more]
gi\|590610106\|ref\|XP_007021722.1\|	2.6e-65	77.40	Ubiquitin-conjugating enzyme 36 isoform 2 [Theobroma cacao]	[more]
gi\|763745450\|gb\|KJB12889.1\|	5.8e-65	76.40	hypothetical protein B456_002G042900 [Gossypium raimondii]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR023313	UBQ-conjugating_AS
IPR016135	UBQ-conjugating_enzyme/RWD
IPR000608	UBQ-conjugat_E2

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006301	postreplication repair
biological_process	GO:0070534	protein K63-linked ubiquitination
biological_process	GO:0010039	response to iron ion
biological_process	GO:0010053	root epidermal cell differentiation
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
biological_process	GO:0008150	biological_process
biological_process	GO:0008152	metabolic process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0031372	UBC13-MMS2 complex
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0005634	nucleus
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005829	cytosol
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016874	ligase activity
molecular_function	GO:0061630	ubiquitin protein ligase activity
molecular_function	GO:0031625	ubiquitin protein ligase binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi07G008750.1	Lsi07G008750.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000608	Ubiquitin-conjugating enzyme E2	PFAM	PF00179	UQ_con	coord: 58..172 score: 2.0
IPR000608	Ubiquitin-conjugating enzyme E2	PROFILE	PS50127	UBIQUITIN_CONJUGAT_2	coord: 58..175 score: 3
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	GENE3D	G3DSA:3.10.110.10		coord: 2..175 score: 3.8
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	unknown	SSF54495	UBC-like	coord: 58..172 score: 1.05
IPR023313	Ubiquitin-conjugating enzyme, active site	PROSITE	PS00183	UBIQUITIN_CONJUGAT_1	coord: 113..128 scor
None	No IPR available	PANTHER	PTHR24067	UBIQUITIN-CONJUGATING ENZYME E2	coord: 58..176 score: 2.0E-101coord: 1..22 score: 2.0E
None	No IPR available	PANTHER	PTHR24067:SF159	UBIQUITIN-CONJUGATING ENZYME E2 36	coord: 58..176 score: 2.0E-101coord: 1..22 score: 2.0E
None	No IPR available	SMART	SM00212	ubc_7	coord: 48..178 score: 9.4

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi07G008750	Csa4G082400	Cucumber (Chinese Long) v2	culsiB304
Lsi07G008750	CSPI04G07830	Wild cucumber (PI 183967)	cpilsiB304
Lsi07G008750	Cucsa.273770	Cucumber (Gy14) v1	cgylsiB445
Lsi07G008750	CmaCh16G004420	Cucurbita maxima (Rimu)	cmalsiB325
Lsi07G008750	CmoCh16G004770	Cucurbita moschata (Rifu)	cmolsiB314
Lsi07G008750	Cla005383	Watermelon (97103) v1	lsiwmB440
Lsi07G008750	MELO3C016132	Melon (DHL92) v3.5.1	lsimeB455
Lsi07G008750	ClCG07G010300	Watermelon (Charleston Gray)	lsiwcgB412
Lsi07G008750	MELO3C016132.2	Melon (DHL92) v3.6.1	lsimedB472
Lsi07G008750	Cla97C07G136990	Watermelon (97103) v2	lsiwmbB411
Lsi07G008750	Bhi01G002469	Wax gourd	lsiwgoB544
Lsi07G008750	Cp4.1LG14g03380	Cucurbita pepo (Zucchini)	cpelsiB184
Lsi07G008750	CsGy4G007700	Cucumber (Gy14) v2	cgyblsiB278
Lsi07G008750	Carg11370	Silver-seed gourd	carlsiB596
Lsi07G008750	CsaV3_4G008040	Cucumber (Chinese Long) v3	cuclsiB323

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi07G008750	Silver-seed gourd	carlsiB043
Lsi07G008750	Cucurbita maxima (Rimu)	cmalsiB695
Lsi07G008750	Cucurbita moschata (Rifu)	cmolsiB689
Lsi07G008750	Cucurbita pepo (Zucchini)	cpelsiB372