Cp4.1LG14g03380 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG14g03380
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Ubiquitin-conjugating enzyme E2
Location	Cp4.1LG14 : 2274107 .. 2278660 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATAAAGGATTGGGCTTTGCATTAGAAACTTCTACCTTCAAAGCTAAGTCTTTATAATCTAGAGAGAGGAAAGCGTCCCTTTTCCTGTTTTCTCTCTCTTCATTTCGTCTAAACCCTATCGCGAGCTCTCAATCGATCTTCAATGGCGAACAGTAATCTTCCCCGAAGGATCATCAAGGTAACATCACTGATCCTCTTCAAGATCTCCTTCATTTTCCCCGATGTCTTTATTCTGCTCGATTGATTACTTTGGTGAAGAAATGGTCTGGTTTTGCTGTTTGGATTTCGGATATTCTTTTAGATTTATGTGTCAGTAGAATTGGGATTGGAATTGATTTTTCTCCTCCATTTTGTGAACAATCGCAGGAAACTCAGCGTCTCCTTAGTGAACCGGGTGAGTTTTGGGTGTATTTGTTGGATTATTTTCGAATATGGGGGTTGTTTGATTCCTGATCTTGTTACTGGGAGTTCTGTTTTTTTTGTGTTATTTGGGTCTTGGTCGTTGATAGATTTATTGTTTGGATTAATTCATCCGATAATTATGAAGTCGAAGTTTATTTTGATTTAGTTGATCTCGATCTTTGATATGTGATTTTAGCCCCTGGGATTAGTGCCTCGCCGTCAGAAGATAATATGCGATATTTTAACGTGATGATCCTTGGCCCGACCCAGTCACCCTATGAAGGTAAATTACTTGAACAGTATGTTGTTAGGAACGTTAAATTCTTTTGAATAATTTGCTATTCCATTGTTGGTACATATGAATGGGTGTAGAACCAACTACGTATTTAAGTGTAAATTCGCCTAAGTTCTACATATGAATTACTATGAAGAATGAAATGACATTCACAGTGAACGCTATGGGATTATCTTCTACTCGATGAAAACAAAATGTCTTATCTTCCCTTTTAGCTTTGGTTTTGTAAACTTTATGCCCTATTGTTCAACGGTAGAATGTCACTCTTCTTGGCTGCTAAACTTGGGAACATGGTGTTTACATACTACTGACAACTGAATAGGTTTTATTTAGAGATGTAATCTGATCATCATTTCACTTTTTTTTATTGAATAATGTTATATGTCATCTTTCATTTTGGGCTTCTTTTCTCCTGACCCTTTGTCAATTCTAAAGTTGTTAGTCCACTTCAATGTTCTTTTTACGCATATATTTGTCCTGAATCCAAAGTACTTTGCAGGAGGAGTTTTCAAGTTGGAGCTATTTTTACCCGAAGAATATCCTATGGCTGCTCCCAAGGTAATTTGTAATTCTTTCCTTCTTAGCTTATCAGATAAACTTTTTCATNAAAAAAAAGTCTCATCTTCCCTTTTAACTTTGGTTTTGTAAACTTTATGCCCTATTGTTCAACGGTAGAATGTCACTCTTCTTGGCTGCTAAACTTGGGAACATGTTGTTTACATACTACTGACAACTGAATAGGTTTTATTTAGACATGTAATCTGATCATCATTTCACTTTTTTTTATTGAATAATGTTATATGTCATCTTTCATTTTGGGCTTCTTTTCTCCTGNTTTCAATATTCTTTTTAAGCATATATTTGTCCTGAATCCAAAGTACTTTGCAGGAGGAGTTTTCAAGTTGGAGCTATTTTTACCCGAGGAATATCCTATGGCTGCTCCCAAGGTAATTTGTAATTCTTTCCTACTTGGTTTATCAGATAATTTTTTTTCATTTCTTTTACCAATATTCTTTAAAAAAGTGTCATATTTTTTTGTTTTGTTTTGTTTTTCATTAAAAAAAATAAAAATGTATCAACAGAAGTCTCCAGTAAAAAAACATAGGGCTTTTGGGGGATTTCCAAGTACTATTGAAGATCATTTGACAACTTCTAACCTAAATGTGCTGTTAAAATCTCTTCAAGTTTCTTATACTTACTGAGCTACTTATACTTCCTCGTATATTACTTATTGAATTATGATTTCACTTATACATCATGAGGGTGGTATGTCTAGAAGTAATCAGAAATTGGATTTGCCATCATTACAATATTTTTTTCCTTTTCGTTTCTTCCCCATTCTCTTGAGGGTTTCCGATCTTGCACTGAATATAAATAAAAAGATCAGAAGCCATCGTAATTTACTTTTCATACACAGTTTTTTCCATTTCATGAATCATTATATTTACAACTTAATCTTGTTGATCTATGATACACATGTGAGCACATTGATATTACGTGAAGGGAATTTTTGGTAGTTGAGGTCTTCATGGTTGGAGATGGAGAATAGCTTATTTCATGACTTGCTTTGTCGGGCCTAGCTTTGAAAGATTGAGAGGAAACATGTTTGGCTGGACTAAATGAGGAAACATCTTGCGAGAGTCCAGTTGTGTGGAATGCAATTCATGACAAAATGTTCTAGGCAATCGTTTCAAACTTCTTTTTTCTCATTTTGCATAGAAAACCAATTTTCATAAAGAAGATAGAAGAGCAAAATTAAGGCGAGGCTCACAAAAATAAGGGCCTGACAGAAATAGGAAAAGCATCACTCACATTTACAAAATGGACCCCAGTGCATTCCCCAAACTTGTACTTCAGTTAGACTACTGTTTTCTTTTCCTGTTCCTATAAAATAAATAAAACTAATTTTTATTCTTGGAGATTCTATTATTAATTTTTGTAGAATGTACCTAGTGATGTAAGTAAGTATGCCTGTTACTTTTTTTTTTCTCGACTTATGTATGAAAAGCTATCTGTCCTTTTGACTGGACTGTCACGTGAGTGAAGAAACTGTTGTTTAAGGATTTAACGACCTGCTCCATGCCGATGACACTTCAATTATCATTATTACTTATTTTTTGTAGTACATGTAATCATGTATTAAGTAAAGTGTGGTTGTTTATCTGGTTGATTTTACCTTGTTTTGTGTCGAACCTGTTGGGGGGTGGGGGTTTGCATGAAGCAATTGACACTCATTACACATAAGTTAACTAATTCGACTTGAGTGGTTGATCTTCATGCCTTTTGCGTACTGTTCTATAAACAGAAAATTGATCCACTCATAAAAGAGATGTAAAACAACGGAAATGTTTAAACAGTGTTGGGCAATTTTTTTTTAAGGTTCAAGTTATTGCCTTTTGATGTCCTAGGACTGAAGATTCTGTATCTAGTACGCTAGGTGGTCCTGTTGGAACTTATCATAACTTGTTTTGATTGCCTCCACTACCATCTTTTCCCCTTCGTCTGTTTCCATCTTCATTTACATATTTTTATTTTTGCGTGATTATTTTTGTGGTGCAGGTTCGATTTCTCACAAAGATTTATCACCCGAATATTGATAAGGTACGCGTCTATTTTCATAATTCTTATTGCCGTCCCCACCGACGTGCTGCAGTTTCATTATTGATGGTGTGATTGTTTGTAATTTAGCTTGGGAGGATATGCCTTGATATTCTGAAAGACAAATGGAGTCCAGCTCTACAGATACGAACTGTACTTTTGAGGTATTATAATGTTAGGTGTGATTTTTCAGTGACTGCATATTAAATTTGAACATTTTGCATGGTATTTTATTCATTTGATTAGTACAAGGAAATACAGATCTGAGAATTTTACCACCATGCACATCTTATGTAGCACATTGGTTTAGAGAGCTTTAGTTGTTTTTCTAGGACCTTCCCCAACTGCGGTCATTTCCTTCGTAAATTTATCTTCAATAGTTCCGATAATCATACGAAAGTTGAAGAGATTCAATTACCACTGGCATCCATTTCTTCTCCTCTTCCTTCTGCGTCCCTTTTCTATGAACTTTTTTTTTAGTAACAGTCACTTTCTCTATCACTTTCTGTCAGTATTCAAGCTCTTCTGAGTGCTCCAAACCCAGATGATCCACTTTCCGAGAACATTGCCAAACATTGGAAATCGAATGAGGCCGAAGCTGTTGAAACAGGTGAGTTGGTCTAAACCATTGCTTTTGTTAAACCTTTTGCTTAACTAACCTTTTTGATCCTGAGTTTAAGCTTTGTTTCAGTTTGGTTCTTGTGTTTTTAAAAGCTCTATATCTTTAGCTTTTGATTAAATCTGGTTTAAGAAGTGTTATCATGAGATGATTGTTGATTCTGTCGGTGGAGAGGGACCGAGTATTGTTTGCGTTTAAAGCTAATGAATCGAGTCGGGTTTAGAATGTTGCCACTCCTTTCAGTAGAAGTAATGTAAAATTGTAGCTTAATTTGGTGTAGCCTCTGACTGACACCATTTTGTGGTTGGATGTTCTCAGCAAAGGAATGGACTCGATTATACGCAAGTGGTGCGTAAAGAAGGGAAACTGCGGAAGCCTTTTATCTCTTCGGTTTTTAATAACATGAATGTGCCATTTGCTCTGTGGATTTTAATGAAAAAATCTGGAAGAATTTAGTGTCAAAATTGTAACTGTCTCTATAATTGTGCGTCTTTTGGCAGGAGTCTGTACCCCCATACTTTGTATGATCATGATATGATTAGATGGAATACCTTCTTCTAAGTTCAATATCTCCTAAAATTGTAAGCCCTCGCCATATGCCCCTTATTTTTCAAGAATGTTTTAATTATTAACAACTTCA

mRNA sequence

AATAAAGGATTGGGCTTTGCATTAGAAACTTCTACCTTCAAAGCTAAGTCTTTATAATCTAGAGAGAGGAAAGCGTCCCTTTTCCTGTTTTCTCTCTCTTCATTTCGTCTAAACCCTATCGCGAGCTCTCAATCGATCTTCAATGGCGAACAGTAATCTTCCCCGAAGGATCATCAAGGAAACTCAGCGTCTCCTTAGTGAACCGGCCCCTGGGATTAGTGCCTCGCCGTCAGAAGATAATATGCGATATTTTAACGTGATGATCCTTGGCCCGACCCAGTCACCCTATGAAGGAGGAGTTTTCAAGTTGGAGCTATTTTTACCCGAAGAATATCCTATGGCTGCTCCCAAGTTGGAGCTATTTTTACCCGAGGAATATCCTATGGCTGCTCCCAAGGTTCGATTTCTCACAAAGATTTATCACCCGAATATTGATAAGCTTGGGAGGATATGCCTTGATATTCTGAAAGACAAATGGAGTCCAGCTCTACAGATACGAACTGTACTTTTGAGTATTCAAGCTCTTCTGAGTGCTCCAAACCCAGATGATCCACTTTCCGAGAACATTGCCAAACATTGGAAATCGAATGAGGCCGAAGCTCAAAGGAATGGACTCGATTATACGCAAGTGGTGCGTAAAGAAGGGAAACTGCGGAAGCCTTTTATCTCTTCGGTTTTTAATAACATGAATGTGCCATTTGCTCTGTGGATTTTAATGAAAAAATCTGGAAGAATTTAGTGTCAAAATTGTAACTGTCTCTATAATTGTGCGTCTTTTGGCAGGAGTCTGTACCCCCATACTTTGTATGATCATGATATGATTAGATGGAATACCTTCTTCTAAGTTCAATATCTCCTAAAATTGTAAGCCCTCGCCATATGCCCCTTATTTTTCAAGAATGTTTTAATTATTAACAACTTCA

Coding sequence (CDS)

ATGGCGAACAGTAATCTTCCCCGAAGGATCATCAAGGAAACTCAGCGTCTCCTTAGTGAACCGGCCCCTGGGATTAGTGCCTCGCCGTCAGAAGATAATATGCGATATTTTAACGTGATGATCCTTGGCCCGACCCAGTCACCCTATGAAGGAGGAGTTTTCAAGTTGGAGCTATTTTTACCCGAAGAATATCCTATGGCTGCTCCCAAGTTGGAGCTATTTTTACCCGAGGAATATCCTATGGCTGCTCCCAAGGTTCGATTTCTCACAAAGATTTATCACCCGAATATTGATAAGCTTGGGAGGATATGCCTTGATATTCTGAAAGACAAATGGAGTCCAGCTCTACAGATACGAACTGTACTTTTGAGTATTCAAGCTCTTCTGAGTGCTCCAAACCCAGATGATCCACTTTCCGAGAACATTGCCAAACATTGGAAATCGAATGAGGCCGAAGCTCAAAGGAATGGACTCGATTATACGCAAGTGGTGCGTAAAGAAGGGAAACTGCGGAAGCCTTTTATCTCTTCGGTTTTTAATAACATGAATGTGCCATTTGCTCTGTGGATTTTAATGAAAAAATCTGGAAGAATTTAG

Protein sequence

MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKSNEAEAQRNGLDYTQVVRKEGKLRKPFISSVFNNMNVPFALWILMKKSGRI

Homology

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BLAST of Cp4.1LG14g03380 vs. Swiss-Prot
Match: UBC35_ARATH (Ubiquitin-conjugating enzyme E2 35 OS=Arabidopsis thaliana GN=UBC35 PE=1 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 3.2e-72
Identity = 139/163 (85.28%), Postives = 143/163 (87.73%), Query Frame = 1


Query: 1   MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL 60
           MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKL    
Sbjct: 1   MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKL---- 60

Query: 61  PEEYPMAAPKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRT 120
                      ELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRT
Sbjct: 61  -----------ELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRT 120

Query: 121 VLLSIQALLSAPNPDDPLSENIAKHWKSNEAEAQRNGLDYTQV 164
           VLLSIQALLSAPNPDDPLSENIAKHWKSNEAEA     ++T++
Sbjct: 121 VLLSIQALLSAPNPDDPLSENIAKHWKSNEAEAVDTAKEWTRL 148

[Close]

BLAST of Cp4.1LG14g03380 vs. Swiss-Prot
Match: UBC36_ARATH (Ubiquitin-conjugating enzyme E2 36 OS=Arabidopsis thaliana GN=UBC36 PE=1 SV=1)

HSP 1 Score: 271.9 bits (694), Expect = 5.4e-72
Identity = 138/163 (84.66%), Postives = 143/163 (87.73%), Query Frame = 1


Query: 1   MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL 60
           MANSNLPRRIIKETQRLLSEPAPGISASPSE+NMRYFNVMILGPTQSPYEGGVFKL    
Sbjct: 1   MANSNLPRRIIKETQRLLSEPAPGISASPSEENMRYFNVMILGPTQSPYEGGVFKL---- 60

Query: 61  PEEYPMAAPKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRT 120
                      ELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRT
Sbjct: 61  -----------ELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRT 120

Query: 121 VLLSIQALLSAPNPDDPLSENIAKHWKSNEAEAQRNGLDYTQV 164
           VLLSIQALLSAPNPDDPLSENIAKHWKSNEAEA     ++T++
Sbjct: 121 VLLSIQALLSAPNPDDPLSENIAKHWKSNEAEAVETAKEWTRL 148

[Close]

BLAST of Cp4.1LG14g03380 vs. Swiss-Prot
Match: UBE2N_DROME (Ubiquitin-conjugating enzyme E2 N OS=Drosophila melanogaster GN=ben PE=2 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 8.9e-59
Identity = 110/159 (69.18%), Postives = 130/159 (81.76%), Query Frame = 1


Query: 4   SNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEE 63
           S+LPRRIIKETQRL+ EP PGI+A P E+N RYF+V++ GP  SP+EGGVFKL       
Sbjct: 2   SSLPRRIIKETQRLMQEPVPGINAIPDENNARYFHVIVTGPNDSPFEGGVFKL------- 61

Query: 64  YPMAAPKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLL 123
                   ELFLPE+YPM+APKVRF+TKIYHPNID+LGRICLD+LKDKWSPALQIRT+LL
Sbjct: 62  --------ELFLPEDYPMSAPKVRFITKIYHPNIDRLGRICLDVLKDKWSPALQIRTILL 121

Query: 124 SIQALLSAPNPDDPLSENIAKHWKSNEAEAQRNGLDYTQ 163
           SIQALLSAPNPDDPL+ ++A+ WK NEAEA RN  ++TQ
Sbjct: 122 SIQALLSAPNPDDPLANDVAELWKVNEAEAIRNAREWTQ 145

[Close]

BLAST of Cp4.1LG14g03380 vs. Swiss-Prot
Match: UBC13_CAEEL (Ubiquitin-conjugating enzyme E2 13 OS=Caenorhabditis elegans GN=ubc-13 PE=1 SV=2)

HSP 1 Score: 225.7 bits (574), Expect = 4.4e-58
Identity = 112/156 (71.79%), Postives = 126/156 (80.77%), Query Frame = 1


Query: 6   LPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYP 65
           LPRRIIKETQRLL++P PGISA+P E N RYF+VMI GP  SP+ GGVFKL         
Sbjct: 5   LPRRIIKETQRLLADPVPGISANPDESNARYFHVMIAGPDDSPFAGGVFKL--------- 64

Query: 66  MAAPKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSI 125
                 ELFLPEEYPMAAPKVRF+TKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSI
Sbjct: 65  ------ELFLPEEYPMAAPKVRFMTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSI 124

Query: 126 QALLSAPNPDDPLSENIAKHWKSNEAEAQRNGLDYT 162
           QALLSAPNP+DPL+ ++A+ WK+NEAEA +    +T
Sbjct: 125 QALLSAPNPEDPLATDVAEQWKTNEAEAIKTAKQWT 145

[Close]

BLAST of Cp4.1LG14g03380 vs. Swiss-Prot
Match: UBE2N_RAT (Ubiquitin-conjugating enzyme E2 N OS=Rattus norvegicus GN=Ube2n PE=1 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 5.8e-58
Identity = 111/160 (69.38%), Postives = 126/160 (78.75%), Query Frame = 1


Query: 4   SNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEE 63
           + LPRRIIKETQRLL+EP PGI A P E N RYF+V+I GP  SP+EGG FKL       
Sbjct: 2   AGLPRRIIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKL------- 61

Query: 64  YPMAAPKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLL 123
                   ELFLPEEYPMAAPKVRF+TKIYHPN+DKLGRICLDILKDKWSPALQIRTVLL
Sbjct: 62  --------ELFLPEEYPMAAPKVRFMTKIYHPNVDKLGRICLDILKDKWSPALQIRTVLL 121

Query: 124 SIQALLSAPNPDDPLSENIAKHWKSNEAEAQRNGLDYTQV 164
           SIQALLSAPNPDDPL+ ++A+ WKSNEA+A      +T++
Sbjct: 122 SIQALLSAPNPDDPLANDVAEQWKSNEAQAIETARAWTRL 146

[Close]

BLAST of Cp4.1LG14g03380 vs. TrEMBL
Match: F6H2P3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0014g01460 PE=3 SV=1)

HSP 1 Score: 279.6 bits (714), Expect = 2.9e-72
Identity = 143/163 (87.73%), Postives = 145/163 (88.96%), Query Frame = 1


Query: 1   MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL 60
           MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKL    
Sbjct: 1   MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKL---- 60

Query: 61  PEEYPMAAPKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRT 120
                      ELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRT
Sbjct: 61  -----------ELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRT 120

Query: 121 VLLSIQALLSAPNPDDPLSENIAKHWKSNEAEAQRNGLDYTQV 164
           VLLSIQALLSAPNPDDPLSENIAKHWK+NEAEA+RNGL   QV
Sbjct: 121 VLLSIQALLSAPNPDDPLSENIAKHWKTNEAEARRNGLACMQV 148

[Close]

BLAST of Cp4.1LG14g03380 vs. TrEMBL
Match: A0A0D2W708_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G173200 PE=3 SV=1)

HSP 1 Score: 275.8 bits (704), Expect = 4.1e-71
Identity = 140/163 (85.89%), Postives = 146/163 (89.57%), Query Frame = 1


Query: 1   MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL 60
           MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL
Sbjct: 1   MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL 60

Query: 61  PEEYPMAAPKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRT 120
           PEEYPMAAPK +L L          VRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRT
Sbjct: 61  PEEYPMAAPKSKLSL----------VRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRT 120

Query: 121 VLLSIQALLSAPNPDDPLSENIAKHWKSNEAEAQRNGLDYTQV 164
           VLLSIQALLSAPNPDDPLSENIAKHWK+NEAEA     ++T++
Sbjct: 121 VLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRL 153

[Close]

BLAST of Cp4.1LG14g03380 vs. TrEMBL
Match: A0A061F987_THECC (Ubiquitin-conjugating enzyme 36 isoform 2 OS=Theobroma cacao GN=TCM_031769 PE=3 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 1.2e-70
Identity = 139/159 (87.42%), Postives = 141/159 (88.68%), Query Frame = 1


Query: 1   MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL 60
           MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKL    
Sbjct: 52  MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKL---- 111

Query: 61  PEEYPMAAPKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRT 120
                      ELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRT
Sbjct: 112 -----------ELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRT 171

Query: 121 VLLSIQALLSAPNPDDPLSENIAKHWKSNEAEAQRNGLD 160
           VLLSIQALLSAPNPDDPLSENIAKHWK+NEAEA   G+D
Sbjct: 172 VLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETGMD 195

[Close]

BLAST of Cp4.1LG14g03380 vs. TrEMBL
Match: Q45W77_ARAHY (Ubiquitin-conjugating enzyme 1 OS=Arachis hypogaea PE=2 SV=1)

HSP 1 Score: 273.5 bits (698), Expect = 2.1e-70
Identity = 139/163 (85.28%), Postives = 143/163 (87.73%), Query Frame = 1


Query: 1   MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL 60
           MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKL    
Sbjct: 1   MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKL---- 60

Query: 61  PEEYPMAAPKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRT 120
                      ELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRT
Sbjct: 61  -----------ELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRT 120

Query: 121 VLLSIQALLSAPNPDDPLSENIAKHWKSNEAEAQRNGLDYTQV 164
           VLLSIQALLSAPNPDDPLSENIAKHWKSNEAEA     ++T++
Sbjct: 121 VLLSIQALLSAPNPDDPLSENIAKHWKSNEAEAVETAKEWTRL 148

[Close]

BLAST of Cp4.1LG14g03380 vs. TrEMBL
Match: H6VUT0_9FABA (Ubiquitin-conjugating enzyme OS=Ammopiptanthus mongolicus PE=2 SV=1)

HSP 1 Score: 273.5 bits (698), Expect = 2.1e-70
Identity = 139/163 (85.28%), Postives = 143/163 (87.73%), Query Frame = 1


Query: 1   MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL 60
           MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKL    
Sbjct: 1   MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKL---- 60

Query: 61  PEEYPMAAPKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRT 120
                      ELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRT
Sbjct: 61  -----------ELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRT 120

Query: 121 VLLSIQALLSAPNPDDPLSENIAKHWKSNEAEAQRNGLDYTQV 164
           VLLSIQALLSAPNPDDPLSENIAKHWKSNEAEA     ++T++
Sbjct: 121 VLLSIQALLSAPNPDDPLSENIAKHWKSNEAEAVETAKEWTRL 148

[Close]

BLAST of Cp4.1LG14g03380 vs. TAIR10
Match: AT1G78870.1 (AT1G78870.1 ubiquitin-conjugating enzyme 35)

HSP 1 Score: 268.1 bits (684), Expect = 4.4e-72
Identity = 139/164 (84.76%), Postives = 143/164 (87.20%), Query Frame = 1


Query: 1   MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEG-GVFKLELF 60
           MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEG GVFKL   
Sbjct: 1   MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGRGVFKL--- 60

Query: 61  LPEEYPMAAPKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIR 120
                       ELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIR
Sbjct: 61  ------------ELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIR 120

Query: 121 TVLLSIQALLSAPNPDDPLSENIAKHWKSNEAEAQRNGLDYTQV 164
           TVLLSIQALLSAPNPDDPLSENIAKHWKSNEAEA     ++T++
Sbjct: 121 TVLLSIQALLSAPNPDDPLSENIAKHWKSNEAEAVDTAKEWTRL 149

[Close]

BLAST of Cp4.1LG14g03380 vs. TAIR10
Match: AT1G16890.3 (AT1G16890.3 ubiquitin-conjugating enzyme 36)

HSP 1 Score: 263.1 bits (671), Expect = 1.4e-70
Identity = 137/172 (79.65%), Postives = 143/172 (83.14%), Query Frame = 1


Query: 1   MANSNLPRRIIKETQRLLSEP---------APGISASPSEDNMRYFNVMILGPTQSPYEG 60
           MANSNLPRRIIKETQRLLSEP         +PGISASPSE+NMRYFNVMILGPTQSPYEG
Sbjct: 1   MANSNLPRRIIKETQRLLSEPGNFITSFDPSPGISASPSEENMRYFNVMILGPTQSPYEG 60

Query: 61  GVFKLELFLPEEYPMAAPKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDK 120
           GVFKL               ELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDK
Sbjct: 61  GVFKL---------------ELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDK 120

Query: 121 WSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKSNEAEAQRNGLDYTQV 164
           WSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKSNEAEA     ++T++
Sbjct: 121 WSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKSNEAEAVETAKEWTRL 157

[Close]

BLAST of Cp4.1LG14g03380 vs. TAIR10
Match: AT2G16740.1 (AT2G16740.1 ubiquitin-conjugating enzyme 29)

HSP 1 Score: 132.1 bits (331), Expect = 3.7e-31
Identity = 70/155 (45.16%), Postives = 96/155 (61.94%), Query Frame = 1


Query: 8   RRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMA 67
           RRI+KE + L  +P    SA P+ ++M ++   I+GP +SPY GGVF + +  P +YP  
Sbjct: 4   RRILKELKELQRDPPVSCSAGPTGEDMFHWQATIMGPNESPYSGGVFLVNIHFPPDYP-- 63

Query: 68  APKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQA 127
                 F P       PKV F TK++HPNI+  G ICLDILKD+WSPAL I  VLLSI +
Sbjct: 64  ------FKP-------PKVVFRTKVFHPNINSNGNICLDILKDQWSPALTISKVLLSICS 123

Query: 128 LLSAPNPDDPLSENIAKHWKSNEAEAQRNGLDYTQ 163
           LL+ PNPDDPL   IA  +K+++ + +     +TQ
Sbjct: 124 LLTDPNPDDPLVPEIAHIYKTDKTKYEAMARSWTQ 143

[Close]

BLAST of Cp4.1LG14g03380 vs. TAIR10
Match: AT3G08690.1 (AT3G08690.1 ubiquitin-conjugating enzyme 11)

HSP 1 Score: 131.0 bits (328), Expect = 8.3e-31
Identity = 69/155 (44.52%), Postives = 95/155 (61.29%), Query Frame = 1


Query: 8   RRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMA 67
           +RI+KE + L  +P    SA P  ++M ++   I+GP +SPY GGVF + +  P +YP  
Sbjct: 4   KRILKELKDLQKDPPSNCSAGPVAEDMFHWQATIMGPPESPYAGGVFLVSIHFPPDYP-- 63

Query: 68  APKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQA 127
                 F P       PKV F TK+YHPNI+  G ICLDILK++WSPAL I  VLLSI +
Sbjct: 64  ------FKP-------PKVSFKTKVYHPNINSNGSICLDILKEQWSPALTISKVLLSICS 123

Query: 128 LLSAPNPDDPLSENIAKHWKSNEAEAQRNGLDYTQ 163
           LL+ PNPDDPL   IA  +K++ ++ +     +TQ
Sbjct: 124 LLTDPNPDDPLVPEIAHMYKTDRSKYESTARSWTQ 143

[Close]

BLAST of Cp4.1LG14g03380 vs. TAIR10
Match: AT5G53300.1 (AT5G53300.1 ubiquitin-conjugating enzyme 10)

HSP 1 Score: 129.0 bits (323), Expect = 3.2e-30
Identity = 68/155 (43.87%), Postives = 96/155 (61.94%), Query Frame = 1


Query: 8   RRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMA 67
           +RI+KE + L  +P    SA P  ++M ++   I+GP++SPY GGVF + +  P +YP  
Sbjct: 4   KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDYP-- 63

Query: 68  APKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQA 127
                 F P       PKV F TK++HPNI+  G ICLDILK++WSPAL I  VLLSI +
Sbjct: 64  ------FKP-------PKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICS 123

Query: 128 LLSAPNPDDPLSENIAKHWKSNEAEAQRNGLDYTQ 163
           LL+ PNPDDPL   IA  +K+++ + +     +TQ
Sbjct: 124 LLTDPNPDDPLVPEIAHMYKTDKNKYESTARSWTQ 143

[Close]

BLAST of Cp4.1LG14g03380 vs. NCBI nr
Match: gi|823263729|ref|XP_012464625.1| (PREDICTED: ubiquitin-conjugating enzyme E2 36-like isoform X1 [Gossypium raimondii])

HSP 1 Score: 275.8 bits (704), Expect = 5.9e-71
Identity = 140/163 (85.89%), Postives = 146/163 (89.57%), Query Frame = 1


Query: 1   MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL 60
           MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL
Sbjct: 1   MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL 60

Query: 61  PEEYPMAAPKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRT 120
           PEEYPMAAPK +L L          VRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRT
Sbjct: 61  PEEYPMAAPKSKLSL----------VRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRT 120

Query: 121 VLLSIQALLSAPNPDDPLSENIAKHWKSNEAEAQRNGLDYTQV 164
           VLLSIQALLSAPNPDDPLSENIAKHWK+NEAEA     ++T++
Sbjct: 121 VLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRL 153

[Close]

BLAST of Cp4.1LG14g03380 vs. NCBI nr
Match: gi|590610106|ref|XP_007021722.1| (Ubiquitin-conjugating enzyme 36 isoform 2 [Theobroma cacao])

HSP 1 Score: 274.2 bits (700), Expect = 1.7e-70
Identity = 139/159 (87.42%), Postives = 141/159 (88.68%), Query Frame = 1


Query: 1   MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL 60
           MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKL    
Sbjct: 52  MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKL---- 111

Query: 61  PEEYPMAAPKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRT 120
                      ELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRT
Sbjct: 112 -----------ELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRT 171

Query: 121 VLLSIQALLSAPNPDDPLSENIAKHWKSNEAEAQRNGLD 160
           VLLSIQALLSAPNPDDPLSENIAKHWK+NEAEA   G+D
Sbjct: 172 VLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETGMD 195

[Close]

BLAST of Cp4.1LG14g03380 vs. NCBI nr
Match: gi|359807381|ref|NP_001241639.1| (uncharacterized protein LOC100805631 [Glycine max])

HSP 1 Score: 273.5 bits (698), Expect = 3.0e-70
Identity = 139/163 (85.28%), Postives = 143/163 (87.73%), Query Frame = 1


Query: 1   MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL 60
           MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKL    
Sbjct: 1   MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKL---- 60

Query: 61  PEEYPMAAPKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRT 120
                      ELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRT
Sbjct: 61  -----------ELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRT 120

Query: 121 VLLSIQALLSAPNPDDPLSENIAKHWKSNEAEAQRNGLDYTQV 164
           VLLSIQALLSAPNPDDPLSENIAKHWKSNEAEA     ++T++
Sbjct: 121 VLLSIQALLSAPNPDDPLSENIAKHWKSNEAEAVETAKEWTRL 148

[Close]

BLAST of Cp4.1LG14g03380 vs. NCBI nr
Match: gi|950979075|ref|XP_014501799.1| (PREDICTED: ubiquitin-conjugating enzyme E2 35 [Vigna radiata var. radiata])

HSP 1 Score: 273.5 bits (698), Expect = 3.0e-70
Identity = 139/163 (85.28%), Postives = 143/163 (87.73%), Query Frame = 1


Query: 1   MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL 60
           MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKL    
Sbjct: 1   MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKL---- 60

Query: 61  PEEYPMAAPKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRT 120
                      ELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRT
Sbjct: 61  -----------ELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRT 120

Query: 121 VLLSIQALLSAPNPDDPLSENIAKHWKSNEAEAQRNGLDYTQV 164
           VLLSIQALLSAPNPDDPLSENIAKHWKSNEAEA     ++T++
Sbjct: 121 VLLSIQALLSAPNPDDPLSENIAKHWKSNEAEAVETAKEWTRL 148

[Close]

BLAST of Cp4.1LG14g03380 vs. NCBI nr
Match: gi|470115920|ref|XP_004294139.1| (PREDICTED: ubiquitin-conjugating enzyme E2 35 [Fragaria vesca subsp. vesca])

HSP 1 Score: 273.5 bits (698), Expect = 3.0e-70
Identity = 139/163 (85.28%), Postives = 143/163 (87.73%), Query Frame = 1


Query: 1   MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL 60
           MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKL    
Sbjct: 1   MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKL---- 60

Query: 61  PEEYPMAAPKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRT 120
                      ELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRT
Sbjct: 61  -----------ELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRT 120

Query: 121 VLLSIQALLSAPNPDDPLSENIAKHWKSNEAEAQRNGLDYTQV 164
           VLLSIQALLSAPNPDDPLSENIAKHWKSNEAEA     ++T++
Sbjct: 121 VLLSIQALLSAPNPDDPLSENIAKHWKSNEAEAVETAKEWTRL 148

The following BLAST results are available for this feature:

BLAST of Cp4.1LG14g03380 vs. Swiss-Prot


Match Name	E-value	Identity	Description
UBC35_ARATH	3.2e-72	85.28	Ubiquitin-conjugating enzyme E2 35 OS=Arabidopsis thaliana GN=UBC35 PE=1 SV=1	[more]
UBC36_ARATH	5.4e-72	84.66	Ubiquitin-conjugating enzyme E2 36 OS=Arabidopsis thaliana GN=UBC36 PE=1 SV=1	[more]
UBE2N_DROME	8.9e-59	69.18	Ubiquitin-conjugating enzyme E2 N OS=Drosophila melanogaster GN=ben PE=2 SV=1	[more]
UBC13_CAEEL	4.4e-58	71.79	Ubiquitin-conjugating enzyme E2 13 OS=Caenorhabditis elegans GN=ubc-13 PE=1 SV=2	[more]
UBE2N_RAT	5.8e-58	69.38	Ubiquitin-conjugating enzyme E2 N OS=Rattus norvegicus GN=Ube2n PE=1 SV=1	[more]

BLAST of Cp4.1LG14g03380 vs. TrEMBL


Match Name	E-value	Identity	Description
F6H2P3_VITVI	2.9e-72	87.73	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0014g01460 PE=3 SV=...	[more]
A0A0D2W708_GOSRA	4.1e-71	85.89	Uncharacterized protein OS=Gossypium raimondii GN=B456_013G173200 PE=3 SV=1	[more]
A0A061F987_THECC	1.2e-70	87.42	Ubiquitin-conjugating enzyme 36 isoform 2 OS=Theobroma cacao GN=TCM_031769 PE=3 ...	[more]
Q45W77_ARAHY	2.1e-70	85.28	Ubiquitin-conjugating enzyme 1 OS=Arachis hypogaea PE=2 SV=1	[more]
H6VUT0_9FABA	2.1e-70	85.28	Ubiquitin-conjugating enzyme OS=Ammopiptanthus mongolicus PE=2 SV=1	[more]

BLAST of Cp4.1LG14g03380 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G78870.1	4.4e-72	84.76	ubiquitin-conjugating enzyme 35	[more]
AT1G16890.3	1.4e-70	79.65	ubiquitin-conjugating enzyme 36	[more]
AT2G16740.1	3.7e-31	45.16	ubiquitin-conjugating enzyme 29	[more]
AT3G08690.1	8.3e-31	44.52	ubiquitin-conjugating enzyme 11	[more]
AT5G53300.1	3.2e-30	43.87	ubiquitin-conjugating enzyme 10	[more]

BLAST of Cp4.1LG14g03380 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|823263729\|ref\|XP_012464625.1\|	5.9e-71	85.89	PREDICTED: ubiquitin-conjugating enzyme E2 36-like isoform X1 [Gossypium raimond...	[more]
gi\|590610106\|ref\|XP_007021722.1\|	1.7e-70	87.42	Ubiquitin-conjugating enzyme 36 isoform 2 [Theobroma cacao]	[more]
gi\|359807381\|ref\|NP_001241639.1\|	3.0e-70	85.28	uncharacterized protein LOC100805631 [Glycine max]	[more]
gi\|950979075\|ref\|XP_014501799.1\|	3.0e-70	85.28	PREDICTED: ubiquitin-conjugating enzyme E2 35 [Vigna radiata var. radiata]	[more]
gi\|470115920\|ref\|XP_004294139.1\|	3.0e-70	85.28	PREDICTED: ubiquitin-conjugating enzyme E2 35 [Fragaria vesca subsp. vesca]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR023313	UBQ-conjugating_AS
IPR016135	UBQ-conjugating_enzyme/RWD
IPR000608	UBQ-conjugat_E2

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008152	metabolic process
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0016874	ligase activity
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG14g03380.1	Cp4.1LG14g03380.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000608	Ubiquitin-conjugating enzyme E2	PFAM	PF00179	UQ_con	coord: 70..155 score: 7.9
IPR000608	Ubiquitin-conjugating enzyme E2	PROFILE	PS50127	UBIQUITIN_CONJUGAT_2	coord: 8..155 score: 41
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	GENE3D	G3DSA:3.10.110.10		coord: 71..165 score: 2.9E-40coord: 2..70 score: 6.1
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	unknown	SSF54495	UBC-like	coord: 6..71 score: 2.07E-20coord: 70..161 score: 1.97
IPR023313	Ubiquitin-conjugating enzyme, active site	PROSITE	PS00183	UBIQUITIN_CONJUGAT_1	coord: 93..108 scor
None	No IPR available	PANTHER	PTHR24067	UBIQUITIN-CONJUGATING ENZYME E2	coord: 84..163 score: 2.5E-105coord: 1..68 score: 2.5E
None	No IPR available	PANTHER	PTHR24067:SF159	UBIQUITIN-CONJUGATING ENZYME E2 36	coord: 84..163 score: 2.5E-105coord: 1..68 score: 2.5E
None	No IPR available	SMART	SM00212	ubc_7	coord: 8..166 score: 5.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG14g03380	Cucsa.273770	Cucumber (Gy14) v1	cgycpeB0714
Cp4.1LG14g03380	CmaCh16G004420	Cucurbita maxima (Rimu)	cmacpeB344
Cp4.1LG14g03380	CmoCh16G004770	Cucurbita moschata (Rifu)	cmocpeB307
Cp4.1LG14g03380	Cla005383	Watermelon (97103) v1	cpewmB219
Cp4.1LG14g03380	Csa4G082400	Cucumber (Chinese Long) v2	cpecuB221
Cp4.1LG14g03380	MELO3C016132	Melon (DHL92) v3.5.1	cpemeB196
Cp4.1LG14g03380	ClCG07G010300	Watermelon (Charleston Gray)	cpewcgB209
Cp4.1LG14g03380	CSPI04G07830	Wild cucumber (PI 183967)	cpecpiB223
Cp4.1LG14g03380	Lsi07G008750	Bottle gourd (USVL1VR-Ls)	cpelsiB184
Cp4.1LG14g03380	MELO3C016132.2	Melon (DHL92) v3.6.1	cpemedB239
Cp4.1LG14g03380	CsaV3_4G008040	Cucumber (Chinese Long) v3	cpecucB0266
Cp4.1LG14g03380	Bhi01G002469	Wax gourd	cpewgoB0294
Cp4.1LG14g03380	CsGy4G007700	Cucumber (Gy14) v2	cgybcpeB487
Cp4.1LG14g03380	Carg11370	Silver-seed gourd	carcpeB0926

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG14g03380	Silver-seed gourd	carcpeB0057
Cp4.1LG14g03380	Cucurbita pepo (Zucchini)	cpecpeB236
Cp4.1LG14g03380	Cucurbita maxima (Rimu)	cmacpeB717
Cp4.1LG14g03380	Cucurbita moschata (Rifu)	cmocpeB670