Lsi07G008520 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi07G008520
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Ring E3 ubiquitin ligase
Location	chr07 : 9585204 .. 9594894 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTAATAAGCTTGGAAGAAGGAGACAAATGGTTGATGAGAAGTACACAAGGCCTCAGGGTCTTTACAACCATAAAGAAGTGGATCATAAGAAACTTAGGAAACTCATACTTGAATCAAAGCTTGCGCCATGTTATCCTGGAGATGAAGAATCTGCCTCTGATCTTGAAGAATGCCCCATATGCTTTCTGGTTTGTCATCACCCTTGGGGTTTTAAAGGCTCTGTTCCCCCCCCCCCCCCCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTGTTCCCCCCCCCCCCCCCACATATCTTGGTGGCTTTGTCTCATTCATTTTTTTTCCCTGTCTGGCTCTGGTGGATTAAAATATTGATTGTCTACAAGGCTATAGAAAGTTAAACAACTTGCGTTCTCTCTCTTTTTTTTTTTTTTTCTTGGAATGGTTACAGGAATTTAAACATTTTTTTTATTTCACTATTTCTTATGTTGTGAATTCCTCTGTTAAATATATTTCATCTTCCATATTTTTTTTAAGGTAACAAATTGAAATGTTATAGTTCATCTGTATTTTTGGGTGTTGTAACCTTTTCTTTTCTTTTTCTTTCCTCCTCCCTTTCAGTATTATCCAAGTCTCAATCGATCAAGATGTTGCATGAAAAGCATTTGTACAGGTAGATTGGGATAAATTTCACAAATGATTTATGATATGAATTTCATTTAGTCTGATAAATTTCCCTTCTTTTTCCAGAATGTTTTCTACAAATGAAAGTTCCAAATTCTACCCGGCCTACACAGTATCCTTCACCATGCATGGCATACCTCCGTATATATAATATGCTTTTTCAGTTTACTTTAAAGCTTTACTTCACCACTGTCATGCTTGTATATCTTAACTTGAGGAGATGTCCTTTTTGCAAAACCTCAAATTATGCTGTGGAGTATAGAGGTGTGAAATCAAAAGAAGAGAAGAGCTTGGAGCAAATTGTAAGACTTGATAATGTCATATTTGGTATCGTTATCTATTGGAACTACGGGATATCTAAAGCTTCTATCCCAATTGAAACCTATGACTAAACAACATTTATTGGAATTTCCCAGGAAGAACAGCGTGTTATAGAAGCAAAGATTAGAATACGGCAGCAGGAACTTCAGGATGATGAGGAAAGAATGCAGAAAAGACATGAATTAAGTACCTCTAATGCTGATACTACTGTGGAGGATGGTGAAGACAGCCCTGCAGCTGGTAGAATTTTACATCATTCAGGTGTTTTGTATTTGTGATTTTTTTTTTTCTGACTGCTTTCAAATATTTATCATCATTTTATGCGCTTCATTTTGGCAGTTCCATCTTCTCAATCTCCTGCCGAAGATGAGGAAATAGTTAGCTTGCCAGATTCTTGTATGACCCAAATCAGACCGCCACCACCTCCTATGCCCATTAGAAGCAACAGGTTCTTTTCGTTCTATTCTGATTGTGTTTCTGTCAATTAATGGACAGGTTTACCATTAATGTGCTTTCATTTATACTTGTGCCTCTCCGCTAATAAGTTGAATGATCAGACTTGCGAGAGGACTCCTTTGTATATATCTTTCTAAAAAATCAAAGCCCCTTGTTCTTTGACATCAATTTTGCATACGCAATCACATTTCGGTTTGCTTTGCTTCAAAAACGTTTCTGCAAACAAATATTCACTATCTCTCTCTCTCATACACACACACACACACACATTTTTAACCGTCATTAAATAATTTCCATGGTTCAATTTAACTAATTTGAGCTCTTTAAAATGATTTTCTACCAAACATTACTCTCCCAGAAATTGTGACTTGTACTCGTTGCTTAATTTGCTTGCATACATTTTGGACGGAGAATAAGTTAGTAAGATTGATATAAAATTTCTCTCTTTCTCAAGGATTGTCTGGATATATACCCAGGCAACCAGGGAAGTTACAAAGAAAGCTCCAATGTACTGGATTTTTTTTAATTAAAAAAAAATCATAGATATTTAGAGTTAGCTGCCCAAAATGGTCATACTGGAAACAAACGATACCTAGCATGTCCTTATTATCACCAAATCTCACATAAAAGCTTATTTGCTTTCCGACCTCCTCAAATGTTGATAACAGAGAGGTTCCATAAAGCTTTGGCTTTGGCCTATATCTTGAAAGGTTGGCCAAGGACCAGGATTGGAGAGAAATAATCACTAACAGCCAATGTTGTAAGGATGAAGAATTCAGATGTGAGCTACTTTCATATGGAGGAAAGAGTTTTGTGATGTTAAGGAGATAGAAGAGATTATTTCCTTTTCTCTAGCTTAGTGCGAATAATGGGGGACTTTTGAGTGGGTAAAGGATGATACCAATTTCAATCACGTGCATTTGCAGATGACCTGAATGGTTAGTATCGATGGATGATGGGGGAGAAACTACAGAATCAAATGATATTCCTAGATTTTTCTGAAGGCTTTCAGCATGAAGACTAATATGGCTAAATCCATGCTAGTGTGAACTAATATTGATTATTGGGATGTATATGACCAAGTTACCAGACTCTTGCTCTTGGGGTTCCTGGCTAGTTACTTATTTGCTCTTGGGATTTTTTCTGGCGGAAAATGTCACCAACTCACCACTTAACAGATCTGGAGTCTAGTAAAATAAATGACTTTGCTAAACTTTCTTGGTCGTCAGAATTTACAATCTATCTCTAGCCAAAGTTGTGCAGTTGATTCCTGTTTGATCTATTTTGTTGACCTTCCTTATTTCCATTTCATTTTCAAATGCCAATGAAGATTGCCAAGAGGTCGTAGGCTGGAGAGAAGAATTGGAGATCTGTTATGGGTTTTGGCTTGGGGGAGAAGGTAGTTGCCATCTTGTTAATTGGAGTATCATTTCCTTGCATTCTAATAATGGTGTTGGTCTCAGCTAATTGGGTTGTGGAGAAAGTTGTTTGCAATGTTTAACCTTAATTGGGTTTTTTGCAATGATTTTAAGGAGAATGTGTCTCAGCTCGTAATAGGTCCTTTAAAAGCACATTTACTACGGTTATGGATTAATGCAGTTAAAGCTGTTTTGTCAGAAATTGGTTTGATCATTTTGAGATTGCTAGAGTCAAAACTTCCTCTTGCTGCTCATTTTCCAAGATTTTTTCTATTATTCAATTCAAGATATTTGTCTTAATTGGAATATTTTCACTCAAGCATTGTAATTTGTAATTATGTCGTCATGACATATAGTTCTCTATTGTAATTGCTATATTTTGTTTTGGGAGTGATGAGGGTGCTATGGGTGTGTCAACCTAGTTGAGATAACCGAGTGCGCCTGCTAATTCCTAGTTTTAGTATTAGTAATCGTATGTATTTAGTCTCTTTGTAATTTGAGCAATAATCTCTTTTCATTTCATCAATGAAAAGTGTTGTTTCCATTTCCAATAATGGTGTTGGTCTTGTAAATTTTGGAAGCACATTGTTACTCTCCAAATGGATTTGGTGATTTTCTGAAGGAGAGAAGAGATGCTTTGGTCAAATATATTTGTTAGGGCAGTCAATTTGGTGGGTCATGGATAAGAGTAAGCTCATTAGTGGAAGAAACCACTGGGGTTTCTTAGGAAAATTTCTTAGGTGAGGTTGCAAGTTGAGCGGGTTTCTTCTTTTGAGACTGGCTGCTGTAAAATGATCTCATTTTAGGACTTCTGGATTTGTAAGCAATCTCTACAGATGCTTTTCTGAACAAGTGGTGGCTTAACAGCTCCAGAATAGTGCAGAAAGTGTGGAACTACCCGATGGGAGAAATTAATGGATCAAGAGGCTTTTGTGTGGCTCTGGTTGTATGGATTTTCTTCAGACTTACCAACCGAACCAAACTATGGGATTCTAGAAGATGTGGTCTTGAGAATTCTAGCTAATATTCAGTGAAAGTCTATGTTCTACCAGTTGACTGCTATTGTCTTGCATAAGTCTTATGAACGATGTTTGAAAAATTAAATCTTCCAACAATGCTAAGCTCATTCATGTGGACAGTAGTATCAATCTAAAAACATGGAGGAAATACAATATTTTCCTATTTGTTTCTTAGTGGAAGCATTTTCTGCAAAAGGAAGCAGATGACAGGCCCACATGTACCCAGTGCCCTTGCAATAATAAAAGTTGGATGAATCTTTTGGCATTTTTTGGAATGAGCTAATGCTTCCCCAGACAAATTCAAGGTCTGCCTTGTGGTCACGGATTTGAAGGAAAAACCAAGGTCCTAGAGCCAATGCAGTGAAAACATCATTGTAATGGATTTGGAAAGCAAGAGAGTTTTGAAGATAGATTCAGAGATTGGGAAGAAGTGTGAGGGTTAGCTAGACTTTTGAGTTAAATTGGTTAACTTTTCCAGATGTTTTTGCAATTATATTTTTATCTGTTATTTTTGTAATCTTTCCCTTGGCCTTTTAGGGCTCTTTGACCTCCTGTATTTCTTATAATTTCCACCAAAAACTTTTGGATTCTCTCTCTGTTTGGGGAGGGGGGTTGGGTGGGTAGAAAAGAAATCCAAACCATCCTTAGGGTTGCTGGTTGTTGAAGTAGTTTCCTTACATTAAATGAAACATCCCTTAGGGCTGCGGAAGAGTCTCTTTCAAATGTAGAAAGCATGTCAGATCAACTCTGATACTTATTAAGTTTAATCATGTGATGTGAAGTACATTATCAGTTAAATCTTTTTTACTGAAAAAAGATATAAGCCTAGAGTCAATTAAAATTCGGTGAAATATATTAGGTTCTTCATTGTACTTAGCTTACCATACTATGTGACAGAGAAAACATTTGAATTTTCTTTGCCTCTTCATTTGGAAAGTTCAAGTCCCAAAGAAAATTCAAGGGTTTTCAGAAACCATTAGACTTGTATTCTCATAGTTAATACAAGCCCTTTGTCTTTTTTTTTCTTTTTTTTTTTTCACCAGAAAGAGTCGGTTCTAGAAGTTGTCTTTATTACTTTGTTATAGAAAAATTTCTATTAAGGCCTTTGGAAGACGTGTTTTTTGGGGACAATAAGAGGACATGAGATGGGAGTACATATGCGCAAATCAGACTTTTTAAACCTAAATTTTGTTTGTTTCTGATAAATTTGATCTATAGTCTTCTGATGATGGTAGGTTGTGATGTGTATAGTCAGAACTATATATATTGATAAAAGCAATAACTTTAATTGAGAAAGAAATGAAAGAATAACTTTACTTTAATACAAGGGCATACAAAAAATTAAGCCCACAAAATAGGGGACCTCTAAAGAACTATATTTATATGTTGTCTCTACTTTATGAGATGGTTGGTTTTTCTGGCTGGAATCTAATAATCTCCCATTTAGAAATTTCAGGGATGATGAATTTGACAAGGATCTTGAGGACATAATGGTCATGGAAGCAATCTGGCTCTCAATTCAGGTATATAGCTCACCAATATATTGAAGAACTATTCTAGTTTCTTTCTTTTTTTTTTTTTTTTTCTCTTATACCTTTGGTGGAATTCTCTTCCCCAGTGTTTTTTATGGCATTAGGATTATTAAAAAAGAAAGGTTTTATATGCTCCACTGATGGAAAATTGTAACCAGAGATATGATTCGTAACCATCTTTAGGTGTATCATGTATGTGTCCTAGGCATTTTTTGACTATACTAAAAAACTATTAAATTCTCTTTTTTGTAATTGTAATCTCTAGTTTGGTTTCTATGTACAAGAGTTTTTTCTACTGCATTTTGATTTTGATTTTTCTTCTTTGTATTCTTTCCATTGTCCTGAACGAAAGTTTGATTTCTTACTTAAATAGGATGATTTGTTATGAACGAGGGGGATATTAACTTCCACAATGATGTCCTAATGAACTTTGACATCTATTATATAATCTATGGAGCCTGAAAATTTTGATGACCTTCTCTAATGAAGTTTGTCGTTGGGATTAGTAGCTGAGGGAATCACGTTCCAATTACTGAGTAGGGTTTTTCTGTTATTGAAATGGTCCGCCATCATGGAAAAGTACATCATTAAGCTTCCCCAGCCTTTACGAAATTCAAAGAGGATTCCCCCTCCTCCTCCCCTTCCTTAGATAAATGTTTTCCCCCCCTTTTTCAAATCATTGTACTCTGCGGGCAAGCTTATATGCAACTTTCTCCAATTACGAAATCATTTGCTAAACCTTACAGCATCTGAATTTGGAGAACTTAGAGAATATATATATTTTTCATTTCTAATTAGAGACCTTCTTTTGAGTAAGATCTTGATAAAGATGCTATTATATCTTTAGTATCCCAAAAAAAAAAGGGCCAAAGGGCTAAGGGGTCATGAGTTCAATCCATGATGGCCACCTACCTAATATTTAATATTCTACGGGTTTCCTTGACACCCAAATTTTGTAGGATCAGGCGGGTTATCCCGTGAGATTAGTTGAGGTGTGTGTAAATTGGTCTGGACATTTACAGATATAAAAATATATATATATATATATGGAAAATTTTAAAAATAGAAAAATAAGAGAAACTATTTACACAAAATAACAAAATTTTTAGATAGTTGTGATAGACGCTGATAGAAGTCTATCAGAGTCTATCCGTAATAGAAATAATAGAAGTCTATCACTGATAGATGCTGATAGAAGTATATCAATATCTATCAGTGTTTTTTTTGTTATTTTCTGTAAATAGTTTGACATTTTTTCTATCTGTAAAAATTTTCCATATATATATAATATCCCAAACCTCCCACCATTCCTATAAGCGTGTTGAGGAAAACTCTTCTATTTCTGTCAAGCTGTATCTGCCAATAGATTGATCTTGTAGCACTATGCCAAAAAGGTTTCGATTTTTGTTTATGTTAATGGCACTTAACTTGACACAACTGTAAACATGAGAGACCTTGTGCAGACTGGGAGCTGCAGAGGAGGTTCCACCACGTTTTAATGGGGAAGAGAAAATCCTAGAACCGATGTGTAGCAATTCATTAAAACACTTAAAATGGTTTGGATTTCTGTGTTGGCTATTACCATTTGTGCTTGTTCTGCCAAAGTTAAAAACCGAATGGACCAACTTAACTTGAATGGGATATCTTTGTAAATCTTTGTGGAAAAAGATTCTTTCAGCGGCAATTCATTAAAACACTTAAAATGGTTTGGATTTCTGTGTTGGCTATTACCATTTGTGCTTGTTCTGCCAAAGCTAAAAACCGAATGGATCAACTTAACTTGAATGGGATATCTTTGTAAATCTTTGTGGAAAAAGATTCTTTCAGCGGCAAAACCACTTCGCAAGATAGATTTGGTTGAAAAAAAATAGCCACAGCCTTCTGACTCCAGTCACTCTGAATTTTTTTCTTTCTGAGAAAGAGAATCGTTCCAACATACTCATGAGTCGAGCTCTTCTTGAATGAACACTTGGGCATTAGCTTCGTCATCACAGCACGCTGCATACTCTGAAGTTCTTGCTATTTGTAATTGGAACAATCTTGGTACTTGTCTGCGAGATGGCAGCCAAAGGAGAATCAAATTAGCGAACCAAGTATCATGTCAAAATTTGGACCATCTTCTTCAGTGCCTCTTGCAGAGTGTTTAACTTTTTTTGTAGGAGGCATGCTGATTTCAACTTTCAACTCCAAATACACCTAAATTTACGAGGTGCCTTTCATTGGTTGACTTAACTATTGTGGTTGAATTAATAAATAGTCACTATCAAATGTTCGTACAGTTTGTTGATCGGAGGACTTCAAGTTTCATTTGTACAGAAGACAAATAATGAGAGTTTGTAGCTCAAAAAATACGTAAAAATATTATGAATCTGAGAAAGAAAAAACTACTGATTTTTTATGCTTGATGGTTTGCCTCCTAGCACTTTCACATTTGAATTGTCTGTAGTATGGTTTTGTTCATGTTTACTTCATTAAAATGTGTAAAAATTGAAATCTTCAGGAGAAAGAAAGGCATAAAGATCCCGTTTACGCCGAGGCTGCTTCTTCTGATCAATATGCAACAGAAGGTCGATATGTCTCTCAAGCCACCATTCCGTTGGCTGGAACATCATCATCCCCGTCTGGAGGTCTTGCTTGTGCCATAGCTGCTTTAGCAGAGCAGCAGCAGCTTCAGCTTGGCAGAGGACCATCATCCAATTGCACAAATGGAGATTCACCTGTCTTCAACATGCTTCCTGGAGCCACGGAATTCTACAACAGGATGAACACCAATGTAGAAAACTATCCACCCGCCCAAGTCTCGATCAGTGCAGAAAATTATGCACCTGCACAGGTTTCGACAATCAACACAGTACCAGACTGTAGGATGATCTTAACAAGAAATGATGGAGAGTGGAATCTAGACCACCATCAATCAGAAGAAGCTGAAGCTGGGACAAGCTACCCAACGTCAGACTCGACTGAAGATAACGGTACTGAATGTTCTTTACCCACAGCTAATGCGATGGATGGTGGAAACCAAGCAACAATACCCATCATTCCTCAAAATTTTGAAGAGCAGATGATGCTGGCCATGGCCGTTTCTCTAGCAGAGGCTCGTGAAGTGTCTACCGGACCGGGGCATTCCTGGCAGGAGTAATTGTGATCATATCTAAATTGGAAGATTCAATTGTAGTCAACATGAATATAGTTGGCAGAGCGTCGGTTGGTTGGCGTAGACGAGCTGCGAGCTAGGGAATGCAGACAAGGAATGGCATGATGTTTGTTTGTTCAAAGGTGAAGGTAGCAACTCCTCTTCCCCCGGCCCATCGGTTGAAAAAAGAAAAATGAAGGGGGGAAAAAATGGAATACAAATTCTTTTAGTGAATTAAAAATTTGGTGGTTCATTCAAGTTCATGGTTGGCAATATTTCTCTTTCTTTTTTCATTTTTCTTTTTTTATAAAAATGATTGAAATCTTGTTTCAGGTTGAAGTTTATAGTGTTTTCTAGTGCACCCTGTAATGTATGGTCTATATGTAAAGTATTTCTCCCCCCAATGTTTTCCTTGTTCAACTTTCTTCAAAATAATATACTCATACCCAAGCTTTTTTT

mRNA sequence

ATGGGTAATAAGCTTGGAAGAAGGAGACAAATGGTTGATGAGAAGTACACAAGGCCTCAGGGTCTTTACAACCATAAAGAAGTGGATCATAAGAAACTTAGGAAACTCATACTTGAATCAAAGCTTGCGCCATGTTATCCTGGAGATGAAGAATCTGCCTCTGATCTTGAAGAATGCCCCATATGCTTTCTGTTTACTTTAAAGCTTTACTTCACCACTGTCATGCTTGTATATCTTAACTTGAGGAGATGTCCTTTTTGCAAAACCTCAAATTATGCTGTGGAGTATAGAGGTGTGAAATCAAAAGAAGAGAAGAGCTTGGAGCAAATTGAAGAACAGCGTGTTATAGAAGCAAAGATTAGAATACGGCAGCAGGAACTTCAGGATGATGAGGAAAGAATGCAGAAAAGACATGAATTAAGTACCTCTAATGCTGATACTACTGTGGAGGATGGTGAAGACAGCCCTGCAGCTGGTAGAATTTTACATCATTCAGTTCCATCTTCTCAATCTCCTGCCGAAGATGAGGAAATAGTTAGCTTGCCAGATTCTTGTATGACCCAAATCAGACCGCCACCACCTCCTATGCCCATTAGAAGCAACAGGGATGATGAATTTGACAAGGATCTTGAGGACATAATGGTCATGGAAGCAATCTGGCTCTCAATTCAGGAGAAAGAAAGGCATAAAGATCCCGTTTACGCCGAGGCTGCTTCTTCTGATCAATATGCAACAGAAGGTCGATATGTCTCTCAAGCCACCATTCCGTTGGCTGGAACATCATCATCCCCGTCTGGAGGTCTTGCTTGTGCCATAGCTGCTTTAGCAGAGCAGCAGCAGCTTCAGCTTGGCAGAGGACCATCATCCAATTGCACAAATGGAGATTCACCTGTCTTCAACATGCTTCCTGGAGCCACGGAATTCTACAACAGGATGAACACCAATGTAGAAAACTATCCACCCGCCCAAGTCTCGATCAGTGCAGAAAATTATGCACCTGCACAGGTTTCGACAATCAACACAGTACCAGACTGTAGGATGATCTTAACAAGAAATGATGGAGAGTGGAATCTAGACCACCATCAATCAGAAGAAGCTGAAGCTGGGACAAGCTACCCAACGTCAGACTCGACTGAAGATAACGGTACTGAATGTTCTTTACCCACAGCTAATGCGATGGATGGTGGAAACCAAGCAACAATACCCATCATTCCTCAAAATTTTGAAGAGCAGATGATGCTGGCCATGGCCGTTTCTCTAGCAGAGGCTCGTGAAGTGTCTACCGGACCGGGGCATTCCTGGCAGGAGTAATTGTGATCATATCTAAATTGGAAGATTCAATTGTAGTCAACATGAATATAGTTGGCAGAGCGTCGGTTGGTTGGCGTAGACGAGCTGCGAGCTAGGGAATGCAGACAAGGAATGGCATGATGTTTGTTTGTTCAAAGGTGAAGGTAGCAACTCCTCTTCCCCCGGCCCATCGGTTGAAAAAAGAAAAATGAAGGGGGGAAAAAATGGAATACAAATTCTTTTAGTGAATTAAAAATTTGGTGGTTCATTCAAGTTCATGGTTGGCAATATTTCTCTTTCTTTTTTCATTTTTCTTTTTTTATAAAAATGATTGAAATCTTGTTTCAGGTTGAAGTTTATAGTGTTTTCTAGTGCACCCTGTAATGTATGGTCTATATGTAAAGTATTTCTCCCCCCAATGTTTTCCTTGTTCAACTTTCTTCAAAATAATATACTCATACCCAAGCTTTTTTT

Coding sequence (CDS)

ATGGGTAATAAGCTTGGAAGAAGGAGACAAATGGTTGATGAGAAGTACACAAGGCCTCAGGGTCTTTACAACCATAAAGAAGTGGATCATAAGAAACTTAGGAAACTCATACTTGAATCAAAGCTTGCGCCATGTTATCCTGGAGATGAAGAATCTGCCTCTGATCTTGAAGAATGCCCCATATGCTTTCTGTTTACTTTAAAGCTTTACTTCACCACTGTCATGCTTGTATATCTTAACTTGAGGAGATGTCCTTTTTGCAAAACCTCAAATTATGCTGTGGAGTATAGAGGTGTGAAATCAAAAGAAGAGAAGAGCTTGGAGCAAATTGAAGAACAGCGTGTTATAGAAGCAAAGATTAGAATACGGCAGCAGGAACTTCAGGATGATGAGGAAAGAATGCAGAAAAGACATGAATTAAGTACCTCTAATGCTGATACTACTGTGGAGGATGGTGAAGACAGCCCTGCAGCTGGTAGAATTTTACATCATTCAGTTCCATCTTCTCAATCTCCTGCCGAAGATGAGGAAATAGTTAGCTTGCCAGATTCTTGTATGACCCAAATCAGACCGCCACCACCTCCTATGCCCATTAGAAGCAACAGGGATGATGAATTTGACAAGGATCTTGAGGACATAATGGTCATGGAAGCAATCTGGCTCTCAATTCAGGAGAAAGAAAGGCATAAAGATCCCGTTTACGCCGAGGCTGCTTCTTCTGATCAATATGCAACAGAAGGTCGATATGTCTCTCAAGCCACCATTCCGTTGGCTGGAACATCATCATCCCCGTCTGGAGGTCTTGCTTGTGCCATAGCTGCTTTAGCAGAGCAGCAGCAGCTTCAGCTTGGCAGAGGACCATCATCCAATTGCACAAATGGAGATTCACCTGTCTTCAACATGCTTCCTGGAGCCACGGAATTCTACAACAGGATGAACACCAATGTAGAAAACTATCCACCCGCCCAAGTCTCGATCAGTGCAGAAAATTATGCACCTGCACAGGTTTCGACAATCAACACAGTACCAGACTGTAGGATGATCTTAACAAGAAATGATGGAGAGTGGAATCTAGACCACCATCAATCAGAAGAAGCTGAAGCTGGGACAAGCTACCCAACGTCAGACTCGACTGAAGATAACGGTACTGAATGTTCTTTACCCACAGCTAATGCGATGGATGGTGGAAACCAAGCAACAATACCCATCATTCCTCAAAATTTTGAAGAGCAGATGATGCTGGCCATGGCCGTTTCTCTAGCAGAGGCTCGTGAAGTGTCTACCGGACCGGGGCATTCCTGGCAGGAGTAA

Protein sequence

MGNKLGRRRQMVDEKYTRPQGLYNHKEVDHKKLRKLILESKLAPCYPGDEESASDLEECPICFLFTLKLYFTTVMLVYLNLRRCPFCKTSNYAVEYRGVKSKEEKSLEQIEEQRVIEAKIRIRQQELQDDEERMQKRHELSTSNADTTVEDGEDSPAAGRILHHSVPSSQSPAEDEEIVSLPDSCMTQIRPPPPPMPIRSNRDDEFDKDLEDIMVMEAIWLSIQEKERHKDPVYAEAASSDQYATEGRYVSQATIPLAGTSSSPSGGLACAIAALAEQQQLQLGRGPSSNCTNGDSPVFNMLPGATEFYNRMNTNVENYPPAQVSISAENYAPAQVSTINTVPDCRMILTRNDGEWNLDHHQSEEAEAGTSYPTSDSTEDNGTECSLPTANAMDGGNQATIPIIPQNFEEQMMLAMAVSLAEAREVSTGPGHSWQE

Homology

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BLAST of Lsi07G008520 vs. TrEMBL
Match: B9GGW3_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s38730g PE=4 SV=1)

HSP 1 Score: 424.9 bits (1091), Expect = 1.2e-115
Identity = 259/454 (57.05%), Postives = 309/454 (68.06%), Query Frame = 1


Query: 1   MGNKLGRRRQMVDEKYTRPQGLYNHKEVDHKKLRKLILESKLAPCYPGDEESASDLEECP 60
           MGNKLGRRRQ+VDE+YTRPQGLY HK+VDHKKLRKLILESKLAPC+PGDE+S +D EECP
Sbjct: 1   MGNKLGRRRQVVDERYTRPQGLYVHKDVDHKKLRKLILESKLAPCFPGDEDSCNDHEECP 60

Query: 61  ICFLF---------TLKLYFTTVMLVYLNLR-----RCPFCKTSNYAVEYRGVKSKEEKS 120
           ICFL+          +K   T   L   N       +CPFCKTSNYAVEYRGVK+KEEK 
Sbjct: 61  ICFLYYPSLNRSRCCMKGICTECFLQMKNPNSTRPTQCPFCKTSNYAVEYRGVKTKEEKG 120

Query: 121 LEQIEEQRVIEAKIRIRQQELQDDEERMQKRHELSTSNADTTVEDGEDSPAAGRILHHSV 180
           LEQIEEQRVIEAKIR+RQQELQD+EERMQKR ++S+S+A+    + E  P        +V
Sbjct: 121 LEQIEEQRVIEAKIRMRQQELQDEEERMQKRLDVSSSSANIEPGELECGPT-------TV 180

Query: 181 PSSQSPAEDEEIVSLPDSCMTQIRPPPPPMPIRSNRDDEFDKDLEDIMVMEAIWLSIQEK 240
           PS  +P E  EIVS   S  +  RPP       +NRDDEFD DLEDIMVMEAIWLSIQE 
Sbjct: 181 PSDTTPVESGEIVS---SQYSSRRPP----HAGANRDDEFDLDLEDIMVMEAIWLSIQEN 240

Query: 241 ERHKDPVYAEAASSDQYATEGRYVSQATI-PLAGTSSSPSGGLACAIAALAEQQQLQLGR 300
            R K+P+  +AA   QY  E RYV+ A   PLAG+SSSPSGGLACAIAALAE+QQ     
Sbjct: 241 GRQKNPLCGDAAPPAQYTMEARYVTPAMAPPLAGSSSSPSGGLACAIAALAERQQT---G 300

Query: 301 GPSSNCTNGDSPVFNMLPGATEFYNRMNTNVENYPPAQVSISAENYAPAQVSTINTVPDC 360
           G S    +G+ P FNMLP  + FYNR+  + +NY PAQ             S+ N +PDC
Sbjct: 301 GESIVHNSGNMPSFNMLPSTSSFYNRLEQDADNYSPAQ-------------SSSNVLPDC 360

Query: 361 RMILTRNDGEWNLDHHQSEEAEAGTSYPTSDSTEDNGTECSL----PTANAMDGGNQATI 420
           RMI+TR+DGEW  D   S+ AEAGTSY +S++ ED G   SL    P  + + G  Q   
Sbjct: 361 RMIVTRDDGEWGAD-RGSDAAEAGTSYASSETAEDAGGISSLLPPPPPTDEIGGSFQNVS 420

Query: 421 PIIPQNFEEQMMLAMAVSLAEAREVSTGPGHSWQ 436
             IP++FEEQMMLAMAVSLAEAR +++GP  +WQ
Sbjct: 421 GPIPESFEEQMMLAMAVSLAEARAMTSGPQSAWQ 423

[Close]

BLAST of Lsi07G008520 vs. TrEMBL
Match: M5WH11_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa006340mg PE=4 SV=1)

HSP 1 Score: 422.9 bits (1086), Expect = 4.6e-115
Identity = 256/451 (56.76%), Postives = 310/451 (68.74%), Query Frame = 1


Query: 1   MGNKLGRRRQMVDEKYTRPQGLYNHKEVDHKKLRKLILESKLAPCYPGDEESASDLEECP 60
           MGNKLGRRRQ++DEKYTRPQGLY+HK+VDHKKL+KLILESKLAPC+PGDEE   DLEECP
Sbjct: 1   MGNKLGRRRQVIDEKYTRPQGLYHHKDVDHKKLKKLILESKLAPCFPGDEECTCDLEECP 60

Query: 61  ICFLFTLKLYFTTVML------VYLNLR--------RCPFCKTSNYAVEYRGVKSKEEKS 120
           ICFL+   L  +   +       +L ++        +CPFCKTSNYAVE+RGVKSKEEK 
Sbjct: 61  ICFLYYPSLNRSRCCMKGICTECFLQMKVPNSTRPTQCPFCKTSNYAVEFRGVKSKEEKG 120

Query: 121 LEQIEEQRVIEAKIRIRQQELQDDEERMQKRHELSTSNADTTVEDGEDSPAAGRILHHSV 180
           LEQIEEQRVIEAKIRIRQQE+QD+EERMQ R  LS+S+ +      E S         +V
Sbjct: 121 LEQIEEQRVIEAKIRIRQQEIQDEEERMQIRQLLSSSSRNMAPVGDEYSV--------TV 180

Query: 181 PSSQSPAEDEEIVSLPDSC-MTQIRPPPPPMPIRSNRDDEFDKDLEDIMVMEAIWLSIQE 240
           PSS SPAE EEIVS  DSC ++  R PPPP   R  R+DEFD DLEDIMVMEAIWLSIQE
Sbjct: 181 PSSASPAEGEEIVSSQDSCAVSMFRQPPPP---RVYREDEFDLDLEDIMVMEAIWLSIQE 240

Query: 241 KERHKDPVYAEAASSDQYATEGRYVSQATIPLAGTSSSPSGGLACAIAALAEQQQLQLGR 300
             RHK P Y + A S+Q+ T   YVS A + ++G SSSPSGGLACAIAALAE+QQ     
Sbjct: 241 NGRHKSPSYGDVAPSEQFVTRQSYVSPAMVSVSG-SSSPSGGLACAIAALAERQQTS--- 300

Query: 301 GPSSNCTNGDSPVFNMLPGATEFYNRMNTNVENYPPAQVSISAENYAPAQVSTINTVPDC 360
           G SS    G+ P F+M+PG + FYNR++   ENYP A  S        +++S  + +P  
Sbjct: 301 GESSTNPGGNVPGFSMVPGTSRFYNRVDRESENYPAAVSS--------SEMSINHGMP-- 360

Query: 361 RMILTRNDGEWNLDHHQSEEAEAGTSYPTSDSTEDNGTECSLPTANAMDGGNQ-ATIPII 420
              LT++D EWN D          TSY +SD+TED G+  + PT N ++G  Q    PI+
Sbjct: 361 ---LTQDDREWNAD-------TTRTSYASSDTTEDAGSTSAPPTGNEIEGDLQNVPDPIV 416

Query: 421 PQNFEEQMMLAMAVSLAEAREVSTGPGHSWQ 436
           P++FEEQMMLAMAVSLAEAR V++GPG  WQ
Sbjct: 421 PESFEEQMMLAMAVSLAEARAVASGPGVPWQ 416

[Close]

BLAST of Lsi07G008520 vs. TrEMBL
Match: V4T5F1_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10020251mg PE=4 SV=1)

HSP 1 Score: 420.6 bits (1080), Expect = 2.3e-114
Identity = 260/460 (56.52%), Postives = 304/460 (66.09%), Query Frame = 1


Query: 1   MGNKLGRRRQMVDEKYTRPQGLYNHKEVDHKKLRKLILESKLAPCYPGDEESASDLEECP 60
           MGNKLGRRRQ+VDEKYTRPQGLY HK+VD KKLRKLILESKL+PCYPGDE+   DLEECP
Sbjct: 1   MGNKLGRRRQVVDEKYTRPQGLYVHKDVDIKKLRKLILESKLSPCYPGDEDCCCDLEECP 60

Query: 61  ICFLFTLKLYFTTVML------VYLNLR--------RCPFCKTSNYAVEYRGVKSKEEKS 120
           ICFL+   L  +   +       +L ++        +CPFCKT+NYAVEYRGVK+KEEK 
Sbjct: 61  ICFLYYPSLNRSRCCMKGICTECFLQMKNPNTTRPTQCPFCKTANYAVEYRGVKTKEEKG 120

Query: 121 LEQIEEQRVIEAKIRIRQQELQDDEERMQKRHELSTSNADTTVEDGEDSPAAGRILHHSV 180
           +EQIEEQRVIEAKIRIRQQELQD+EERM KR E S+              A G +   SV
Sbjct: 121 MEQIEEQRVIEAKIRIRQQELQDEEERMLKRQESSSMGI-----------ALGEV-ESSV 180

Query: 181 PSSQSPAEDEEIVSLPDSCMTQIRPPPPPMPIRSNRDDEFDKDLEDIMVMEAIWLSIQEK 240
            SS+S  E E  VS  D C T +   P     R+N DDEFD DLEDIMVMEAIWLSIQE 
Sbjct: 181 SSSRS-VEGEGNVSFQDLCATPMIRQPSHR--RANGDDEFDLDLEDIMVMEAIWLSIQEN 240

Query: 241 ERHKDPVYAEAASSDQYATEGRYVSQATIPLAGTSSSPSGGLACAIAALAEQQQLQLGRG 300
            R ++P Y EAA S+QY TE RYVS    P+AG+SSSPSGGLACAIAALAE+QQ+    G
Sbjct: 241 GRQRNPTYEEAAPSEQYVTEDRYVSSTMAPIAGSSSSPSGGLACAIAALAERQQVS---G 300

Query: 301 PSSNCTNGDSPVFNMLPGATEFYNRMNTNVENYPPAQVSISAENYAPAQVSTINTVPDCR 360
            SS    G+   FNM PG++  YNRM+ +VENY PA+             S INT PD R
Sbjct: 301 ESSINHGGNMSSFNMFPGSSRLYNRMDHDVENYAPAE-------------SLINTSPDGR 360

Query: 361 MILTRNDGEWNLDHHQSEEAEAGTSYPTSDSTEDNGTECSLP---------TANAMDGGN 420
           M + R++GEW +D   SE AEAGTSY +SD  ED G   SLP         +     GGN
Sbjct: 361 MTVARDEGEWGID-RGSELAEAGTSYASSDMAEDGGGISSLPEDGGGISSLSPTEEIGGN 420

Query: 421 QATI--PIIPQNFEEQMMLAMAVSLAEAREVSTGPGHSWQ 436
              +  PI+P++FEEQMMLAMA SLAEAR +S GP  SWQ
Sbjct: 421 FQNVPGPIVPESFEEQMMLAMAASLAEARPMSNGPEVSWQ 428

[Close]

BLAST of Lsi07G008520 vs. TrEMBL
Match: A0A059BW47_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F03204 PE=4 SV=1)

HSP 1 Score: 419.5 bits (1077), Expect = 5.1e-114
Identity = 257/450 (57.11%), Postives = 305/450 (67.78%), Query Frame = 1


Query: 1   MGNKLGRRRQMVDEKYTRPQGLYNHKEVDHKKLRKLILESKLAPCYPGDEESASDLEECP 60
           MGNKLGRRRQ+VDEKYTRPQGLY+HK+VD K+LRKLILESKLAPCYPGDEES  DLEECP
Sbjct: 1   MGNKLGRRRQVVDEKYTRPQGLYHHKDVDIKRLRKLILESKLAPCYPGDEESTCDLEECP 60

Query: 61  ICFLFTLKLY--------FTTVMLVYLNLRR------CPFCKTSNYAVEYRGVKSKEEKS 120
           ICFL+   L           T   + + +        CPFCKTSNYAVEYRGVK+KEEK 
Sbjct: 61  ICFLYYPSLNRSRCCTKGICTECFLQMKIPNSTRPTPCPFCKTSNYAVEYRGVKTKEEKG 120

Query: 121 LEQIEEQRVIEAKIRIRQQELQDDEERMQKRHELSTSNADTTVEDGEDSPAAGRILHHSV 180
           +EQIEEQRVIEAKIR+RQ+ELQD+EERMQKR +LS+S+  T      D+ + G      V
Sbjct: 121 IEQIEEQRVIEAKIRMRQKELQDEEERMQKRQDLSSSSR-TMAPVEIDNGSVG------V 180

Query: 181 PSSQSPAEDEEIVSLPDSCMTQIRPPPPPMPIRSNRDDEFDKDLEDIMVMEAIWLSIQEK 240
            S +SP ++EEIVS   S  T I   PP   +R+NRDDEFD DLEDIMVMEAIWLSIQEK
Sbjct: 181 QSRRSPVDEEEIVSADQSYSTSISRQPP--HLRTNRDDEFDLDLEDIMVMEAIWLSIQEK 240

Query: 241 ERHKDPVYAEAASSDQYATEGRYVSQATIPLAGTSSSPSGGLACAIAALAEQQQLQLGRG 300
            +      +EAA S+QY +E  YVSQAT PLAG+ SSPSGGLACAIAALAE+QQ+    G
Sbjct: 241 GKFNSLAQSEAAPSEQYVSEDHYVSQATAPLAGSGSSPSGGLACAIAALAERQQMS---G 300

Query: 301 PSSNCTNGDSPVFNMLPGATEFYNRMNTNVENYPPAQVSISAENYAPAQVSTINTVPDCR 360
            SS   N     +N+ P   +FY           P  V   ++ YA  +  T   V    
Sbjct: 301 ESSFSHNTTMSTYNVPPNCGQFY-----------PTAVQ-DSDGYAAPESGTTELVHGGG 360

Query: 361 MILTRNDGEWNLDHHQSEEAEAGTSYPTSDSTEDNGTECSLPTANAMDGGNQ-ATIPIIP 420
           + L R+DGEWN+D   SE AEAGTSY +SDS ED G   +LP  N +D G Q    PI+P
Sbjct: 361 IPLARDDGEWNMD-RGSEVAEAGTSYASSDSPEDAGGISALPQPNEVDVGFQNIPAPIVP 420

Query: 421 QNFEEQMMLAMAVSLAEAREVSTGPGHSWQ 436
           ++FEEQMMLAMAVSLAEAR V++GPG +WQ
Sbjct: 421 ESFEEQMMLAMAVSLAEARAVTSGPGITWQ 425

[Close]

BLAST of Lsi07G008520 vs. TrEMBL
Match: A0A076JXY8_VITVI (RING-type E3 ubiquitin ligase OS=Vitis vinifera GN=GW2 PE=2 SV=1)

HSP 1 Score: 412.9 bits (1060), Expect = 4.8e-112
Identity = 246/454 (54.19%), Postives = 308/454 (67.84%), Query Frame = 1


Query: 1   MGNKLGRRRQMVDEKYTRPQGLYNHKEVDHKKLRKLILESKLAPCYPGDEESASDLEECP 60
           MGNKLGRRRQ+V++KYTRPQGLY HK+VDHKKLRKLIL+SKLAPCYPGDEE+ +D EECP
Sbjct: 1   MGNKLGRRRQVVEDKYTRPQGLYQHKDVDHKKLRKLILDSKLAPCYPGDEEATNDFEECP 60

Query: 61  ICFLF---------TLKLYFTTVMLVYLNLR-----RCPFCKTSNYAVEYRGVKSKEEKS 120
           ICFLF           K   T   L   N       +CP+CKT+NYAVEYRGVK+KEEK 
Sbjct: 61  ICFLFYPSLNRSRCCTKGICTECFLQMKNPHSTRPTQCPYCKTANYAVEYRGVKTKEEKG 120

Query: 121 LEQIEEQRVIEAKIRIRQQELQDDEERMQKRHELSTSNADTTVEDGEDSPAAGRILHHSV 180
           +EQIEEQRVIEAKIR+RQ+E+QD+EERMQKR E+S+S++     + E S  A       V
Sbjct: 121 MEQIEEQRVIEAKIRMRQKEIQDEEERMQKRQEISSSSSILAQGEVEYSTTA-------V 180

Query: 181 PSSQSPAEDEEIVSLPD----SCMTQIRPPPPPMPIRSNRDDEFDKDLEDIMVMEAIWLS 240
           PS +SP E +EI+S  D    S + Q  PP      R NRD+EFD DLEDIMVMEAIWLS
Sbjct: 181 PSFRSPVEGDEILSSQDPPAASMIIQTLPP------RQNRDEEFDLDLEDIMVMEAIWLS 240

Query: 241 IQEKERHKDPVYAEAASSDQYATEGRYVSQATIPLAGTSSSPSGGLACAIAALAEQQQLQ 300
           IQ+  RH++P+Y +  +++QY TE  YV  A  P   +SSSPSGGLACAIAALAE+QQ+ 
Sbjct: 241 IQDNGRHRNPLYGDTTTAEQYVTEEHYVLPAMAPQVESSSSPSGGLACAIAALAERQQM- 300

Query: 301 LGRGPSSNCTNGDSPVFNMLPGATEFYNRMNTNVENYPPAQVSISAENYAPAQVSTINTV 360
              G SS   NG+ P FNM PG + F NR+    ENYPP +             S+++ +
Sbjct: 301 --GGESSTNYNGNMPAFNMPPGCSRFSNRVEQYPENYPPIE-------------SSMDAL 360

Query: 361 PDCRMILTRNDGEWNLDHHQSEEAEAGTSYPTSDSTEDNGTECSLPTANAMDGGNQ-ATI 420
           PD  + +T++DGEW +D   SE AEAGTSY +SD+T++ G   +LP  +  +G  Q    
Sbjct: 361 PDGGLAVTKDDGEWGVD-RGSEVAEAGTSYASSDATDEAGGVAALPPTDEAEGSFQNVGG 420

Query: 421 PIIPQNFEEQMMLAMAVSLAEAREVSTGPGHSWQ 436
           PI+P++FEEQMMLAMAVSLAEAR  ++  G  WQ
Sbjct: 421 PIVPESFEEQMMLAMAVSLAEARARTSTQG-VWQ 423

[Close]

BLAST of Lsi07G008520 vs. TAIR10
Match: AT1G78420.1 (AT1G78420.1 RING/U-box superfamily protein)

HSP 1 Score: 260.4 bits (664), Expect = 2.0e-69
Identity = 188/451 (41.69%), Postives = 246/451 (54.55%), Query Frame = 1


Query: 1   MGNKLGRRRQMVDEKYTRPQGLYNHKEVDHKKLRKLILESKLAPCYPGDEESASDLEECP 60
           MGNKLGR+RQ+V+E+YT+PQGLY +K+VD KKLRKLI+ESKLAPCYPGD+ES  DLEECP
Sbjct: 1   MGNKLGRKRQVVEERYTKPQGLYVNKDVDVKKLRKLIVESKLAPCYPGDDESCHDLEECP 60

Query: 61  ICFLF---------TLKLYFTTVMLVYLNLR-----RCPFCKTSNYAVEYRGVKSKEEKS 120
           ICFL+          +K   T   L   N       +CPFCKT NYAVEYRGVKSKEEK 
Sbjct: 61  ICFLYYPSLNRSRCCMKSICTECFLQMKNPNSARPTQCPFCKTPNYAVEYRGVKSKEEKG 120

Query: 121 LEQIEEQRVIEAKIRIRQQELQDDEERMQKRHELSTSNADTTVEDGEDSPAAGRILHHSV 180
           +EQ+EEQRVIEAKIR+RQ+E+QDDEE+MQKR E  +S+      + E           S 
Sbjct: 121 IEQVEEQRVIEAKIRMRQKEMQDDEEKMQKRLESCSSSTSAMTGEMEYGST-------SA 180

Query: 181 PSSQSPAEDEEIVSLPDSCMTQIRPPPPPMPIRSNRDDEFDKDLEDIMVMEAIWLSIQEK 240
            S  S  +D EI    ++ + +    P     R NR+DE D DLE++MVMEAIWLS+QE 
Sbjct: 181 ISYNSLMDDGEIAPSQNASVVRQHSRP-----RGNREDEVDVDLEELMVMEAIWLSVQET 240

Query: 241 ERHKDPVYAEAASSDQYATEGR-YVSQ----ATIPLAGTSSSPSGGLACAIAALAEQQQL 300
              ++    E  SS QY T+   YVS       I    T SS SGGL+CAI+ALAE+   
Sbjct: 241 GTQRNSASGEITSSRQYVTDNHSYVSSPPRVTPIVEPATPSSSSGGLSCAISALAER--- 300

Query: 301 QLGRGPSSNCTNGDSPVFNMLPGATEFYNRMNTNVENYPPAQVSISAENYAPAQVSTINT 360
                              M+  ++   +  N NV +Y  + +  + ++Y   +      
Sbjct: 301 ------------------QMVGESSSHNHNHNVNVSSY--SMLPGNCDSYYDIEQEV--- 360

Query: 361 VPDCRMILTRNDGEWNLDHHQSE----EAEAGTSYPTSDSTEDNGTECSLPTANAMDGGN 420
                      DG  N  HH+      E  +  SY +S  T +       P         
Sbjct: 361 -----------DGIDNHHHHRHHYEMGETGSSNSYVSSYMTGEGFHNFPPPPP------- 392

Query: 421 QATIPIIPQNFEEQMMLAMAVSLAEAREVST 429
              + I+P++FEEQMM+AMAVS+AE    +T
Sbjct: 421 ---LVIVPESFEEQMMMAMAVSMAEVHATTT 392

[Close]

BLAST of Lsi07G008520 vs. TAIR10
Match: AT1G17145.1 (AT1G17145.1 RING/U-box superfamily protein)

HSP 1 Score: 246.9 bits (629), Expect = 2.3e-65
Identity = 170/341 (49.85%), Postives = 211/341 (61.88%), Query Frame = 1


Query: 1   MGNKLGRRRQMVDEKYTRPQ-GLYNHKEVDHKKLRKLILESKLAPCYPGDEESAS---DL 60
           MGNKLGR+RQ+VDE+YT+PQ GLY  K+VD KKL+KLILESKLAPCYPG EE+ S   DL
Sbjct: 1   MGNKLGRKRQIVDERYTKPQQGLYMSKDVDIKKLKKLILESKLAPCYPGLEETPSSHHDL 60

Query: 61  EECPICFLFTLKLYFTTVML------VYLNLR--------RCPFCKTSNYAVEYRGVKSK 120
           EECPICFL+   L  +   +       +L ++        +CPFCKTSNYAVEYRG K+K
Sbjct: 61  EECPICFLYYPSLNRSRCCMKSICTECFLRMKSPNSAQPTQCPFCKTSNYAVEYRGGKTK 120

Query: 121 EEKSLEQIEEQRVIEAKIRIRQQELQDDEERMQKRHELSTSNADTTVE--DGEDSPAAGR 180
           EEKS EQIEEQRVIEAKIR+RQ+E++DDEERMQKR E  +S++ T+    D E   AA  
Sbjct: 121 EEKSFEQIEEQRVIEAKIRMRQKEVEDDEERMQKRLESYSSSSSTSAATLDTEYGSAA-- 180

Query: 181 ILHHSVPSSQSPAEDEEIVSLPDSCMTQIRPPPPPMPIRSNRDDEFDKDLEDIMVMEAIW 240
                        +DEEIVS  +SC+    P       +  RD +FD DLEDIMVMEAIW
Sbjct: 181 ------------EDDEEIVSSQESCLPSHHP-------QVTRDGQFDFDLEDIMVMEAIW 240

Query: 241 LSIQEKERHKDPVYAEAASSDQYATEGRYVSQATIPLAGTSSSPSGGLACAIAALAEQQQ 300
           LS+QE      P      S D  + + R       P   +SSSPSGGLACAIA LAE+QQ
Sbjct: 241 LSMQE------PGIQRNTSPDDISEKDRNEE----PSTPSSSSPSGGLACAIAVLAERQQ 300

Query: 301 LQLGRGPSSNCTNGDSPVFNMLP--GATEFYNRMNTNVENY 320
           +    G SS+  N +    N++P  G    YN +  +  +Y
Sbjct: 301 MV---GVSSSNQNVNLASQNLVPDNGNNSHYNAIEQDSNHY 307

[Close]

BLAST of Lsi07G008520 vs. NCBI nr
Match: gi|659101784|ref|XP_008451791.1| (PREDICTED: uncharacterized protein LOC103492971 isoform X2 [Cucumis melo])

HSP 1 Score: 733.4 bits (1892), Expect = 2.3e-208
Identity = 388/450 (86.22%), Postives = 402/450 (89.33%), Query Frame = 1


Query: 1   MGNKLGRRRQMVDEKYTRPQGLYNHKEVDHKKLRKLILESKLAPCYPGDEESASDLEECP 60
           MGNKLGRRRQMVDEKYTRPQGLYNHKEVDHKKLRKLILESKLAPCYPGDEESASDLEECP
Sbjct: 1   MGNKLGRRRQMVDEKYTRPQGLYNHKEVDHKKLRKLILESKLAPCYPGDEESASDLEECP 60

Query: 61  ICFLFTLKLYFTTVML------VYLNLR--------RCPFCKTSNYAVEYRGVKSKEEKS 120
           ICFL+   L  +   +       +L ++        +CPFCKTSNYAVEYRGVKSKEEKS
Sbjct: 61  ICFLYYPSLNRSRCCMKSICTECFLQMKVPNSTRPTQCPFCKTSNYAVEYRGVKSKEEKS 120

Query: 121 LEQIEEQRVIEAKIRIRQQELQDDEERMQKRHELSTSNADTTVEDGEDSPAAGRILHHSV 180
           LEQIEEQRVIEAKIRIRQQELQDDEERMQKRHELSTSNADTTVE+GED+PAA        
Sbjct: 121 LEQIEEQRVIEAKIRIRQQELQDDEERMQKRHELSTSNADTTVENGEDNPAAA------- 180

Query: 181 PSSQSPAEDEEIVSLPDSCMTQIRPPPPPMPIRSNRDDEFDKDLEDIMVMEAIWLSIQEK 240
           PSSQSPAEDEEIVSL D CMT IRPPPPP+PIRSNRDDEFD DLEDIMVMEAIWLSIQEK
Sbjct: 181 PSSQSPAEDEEIVSLQDPCMTPIRPPPPPIPIRSNRDDEFDLDLEDIMVMEAIWLSIQEK 240

Query: 241 ERHKDPVYAEAASSDQYATEGRYVSQATIPLAGTSSSPSGGLACAIAALAEQQQLQLGRG 300
            RHKDPVYAEAASSDQYATEGRYVS ATIPLAGTSSSPSGGLACAIAALAEQQ  Q+ RG
Sbjct: 241 GRHKDPVYAEAASSDQYATEGRYVSPATIPLAGTSSSPSGGLACAIAALAEQQ--QISRG 300

Query: 301 PSSNCTNGDSPVFNMLPGATEFYNRMNTNVENYPPAQVSISAENYAPAQVSTINTVPDCR 360
           PSS CTNGDSPVFNMLPGATEFYNRMNTNVENYPP QVSISAENYAPAQVS ++TVPDCR
Sbjct: 301 PSSACTNGDSPVFNMLPGATEFYNRMNTNVENYPPTQVSISAENYAPAQVSAVDTVPDCR 360

Query: 361 MILTRNDGEWNLDHHQSEEAEAGTSYPTSDSTEDNGTECSLPTANAMDGGNQATIPIIPQ 420
           MILTRNDGEWNLD HQSEEAEAGTSYPTSDS EDN TEC+LPT NAMDGGNQATIPIIPQ
Sbjct: 361 MILTRNDGEWNLD-HQSEEAEAGTSYPTSDSNEDNSTECALPTVNAMDGGNQATIPIIPQ 420

Query: 421 NFEEQMMLAMAVSLAEAREVSTGPGHSWQE 437
           NFEEQMMLAMAVSLAEAREVSTGPGHSWQE
Sbjct: 421 NFEEQMMLAMAVSLAEAREVSTGPGHSWQE 440

[Close]

BLAST of Lsi07G008520 vs. NCBI nr
Match: gi|449438951|ref|XP_004137251.1| (PREDICTED: uncharacterized protein LOC101215345 isoform X2 [Cucumis sativus])

HSP 1 Score: 730.7 bits (1885), Expect = 1.5e-207
Identity = 387/450 (86.00%), Postives = 403/450 (89.56%), Query Frame = 1


Query: 1   MGNKLGRRRQMVDEKYTRPQGLYNHKEVDHKKLRKLILESKLAPCYPGDEESASDLEECP 60
           MGNKLGRRRQ+VDEKYTRPQGLYNHKEVDHKKLRKLILESKLAPCYPGDEESASDLEECP
Sbjct: 1   MGNKLGRRRQIVDEKYTRPQGLYNHKEVDHKKLRKLILESKLAPCYPGDEESASDLEECP 60

Query: 61  ICFLFTLKLYFTTVML------VYLNLR--------RCPFCKTSNYAVEYRGVKSKEEKS 120
           ICFL+   L  +   +       +L ++        +CP+CKTSNYAVEYRGVKSKEEKS
Sbjct: 61  ICFLYYPSLNRSRCCMKSICTECFLQMKVPNSTRPTQCPYCKTSNYAVEYRGVKSKEEKS 120

Query: 121 LEQIEEQRVIEAKIRIRQQELQDDEERMQKRHELSTSNADTTVEDGEDSPAAGRILHHSV 180
           LEQIEEQRVIEAKIRIRQQELQDDEERMQKRHELSTSNADTTVE+GEDSPAA       V
Sbjct: 121 LEQIEEQRVIEAKIRIRQQELQDDEERMQKRHELSTSNADTTVENGEDSPAA-------V 180

Query: 181 PSSQSPAEDEEIVSLPDSCMTQIRPPPPPMPIRSNRDDEFDKDLEDIMVMEAIWLSIQEK 240
           PSSQSPAEDEEIVSL D CMTQIRPPPPP+PIRSNRDDEFD DLEDIMVMEAIWLSIQEK
Sbjct: 181 PSSQSPAEDEEIVSLQDPCMTQIRPPPPPIPIRSNRDDEFDLDLEDIMVMEAIWLSIQEK 240

Query: 241 ERHKDPVYAEAASSDQYATEGRYVSQATIPLAGTSSSPSGGLACAIAALAEQQQLQLGRG 300
            R+KDPVYAEAASSDQYATEGRYVS ATIPLAGTSSSPSGGLACAIAALAEQQ  Q+GRG
Sbjct: 241 GRNKDPVYAEAASSDQYATEGRYVSPATIPLAGTSSSPSGGLACAIAALAEQQ--QIGRG 300

Query: 301 PSSNCTNGDSPVFNMLPGATEFYNRMNTNVENYPPAQVSISAENYAPAQVSTINTVPDCR 360
           PSS CTNGDSPVF MLPGATEFYNRMNTNVENYPP Q SISAENYAPAQVST++TVPDCR
Sbjct: 301 PSSTCTNGDSPVFTMLPGATEFYNRMNTNVENYPPTQGSISAENYAPAQVSTVDTVPDCR 360

Query: 361 MILTRNDGEWNLDHHQSEEAEAGTSYPTSDSTEDNGTECSLPTANAMDGGNQATIPIIPQ 420
           MILTRNDGEWNLD HQSEEAEAGTSYPTSD  EDN TEC+LPT NAMDGGNQATIPIIPQ
Sbjct: 361 MILTRNDGEWNLD-HQSEEAEAGTSYPTSDLNEDNSTECALPTVNAMDGGNQATIPIIPQ 420

Query: 421 NFEEQMMLAMAVSLAEAREVSTGPGHSWQE 437
           NFEEQMMLAMAVSLAEAREVSTGPGHSWQE
Sbjct: 421 NFEEQMMLAMAVSLAEAREVSTGPGHSWQE 440

[Close]

BLAST of Lsi07G008520 vs. NCBI nr
Match: gi|659101778|ref|XP_008451788.1| (PREDICTED: uncharacterized protein LOC103492971 isoform X1 [Cucumis melo])

HSP 1 Score: 728.0 bits (1878), Expect = 9.6e-207
Identity = 388/453 (85.65%), Postives = 402/453 (88.74%), Query Frame = 1


Query: 1   MGNKLGRRRQMVDEKYTRPQGLYNHKEVDHKKLRKLILESKLAPCYPGDEESASDLEECP 60
           MGNKLGRRRQMVDEKYTRPQGLYNHKEVDHKKLRKLILESKLAPCYPGDEESASDLEECP
Sbjct: 1   MGNKLGRRRQMVDEKYTRPQGLYNHKEVDHKKLRKLILESKLAPCYPGDEESASDLEECP 60

Query: 61  ICFLFTLKLYFTTVML------VYLNLR--------RCPFCKTSNYAVEYRGVKSKEEKS 120
           ICFL+   L  +   +       +L ++        +CPFCKTSNYAVEYRGVKSKEEKS
Sbjct: 61  ICFLYYPSLNRSRCCMKSICTECFLQMKVPNSTRPTQCPFCKTSNYAVEYRGVKSKEEKS 120

Query: 121 LEQIEEQRVIEAKIRIRQQELQDDEERMQKRHELSTSNADTTVEDGEDSPAAGRILHHSV 180
           LEQIEEQRVIEAKIRIRQQELQDDEERMQKRHELSTSNADTTVE+GED+PAA        
Sbjct: 121 LEQIEEQRVIEAKIRIRQQELQDDEERMQKRHELSTSNADTTVENGEDNPAAA------- 180

Query: 181 PSSQSPAEDEEIVSLPDSCMTQIRPPPPPMPIRSNR---DDEFDKDLEDIMVMEAIWLSI 240
           PSSQSPAEDEEIVSL D CMT IRPPPPP+PIRSNR   DDEFD DLEDIMVMEAIWLSI
Sbjct: 181 PSSQSPAEDEEIVSLQDPCMTPIRPPPPPIPIRSNRNFRDDEFDLDLEDIMVMEAIWLSI 240

Query: 241 QEKERHKDPVYAEAASSDQYATEGRYVSQATIPLAGTSSSPSGGLACAIAALAEQQQLQL 300
           QEK RHKDPVYAEAASSDQYATEGRYVS ATIPLAGTSSSPSGGLACAIAALAEQQQ+  
Sbjct: 241 QEKGRHKDPVYAEAASSDQYATEGRYVSPATIPLAGTSSSPSGGLACAIAALAEQQQIS- 300

Query: 301 GRGPSSNCTNGDSPVFNMLPGATEFYNRMNTNVENYPPAQVSISAENYAPAQVSTINTVP 360
            RGPSS CTNGDSPVFNMLPGATEFYNRMNTNVENYPP QVSISAENYAPAQVS ++TVP
Sbjct: 301 -RGPSSACTNGDSPVFNMLPGATEFYNRMNTNVENYPPTQVSISAENYAPAQVSAVDTVP 360

Query: 361 DCRMILTRNDGEWNLDHHQSEEAEAGTSYPTSDSTEDNGTECSLPTANAMDGGNQATIPI 420
           DCRMILTRNDGEWNLD HQSEEAEAGTSYPTSDS EDN TEC+LPT NAMDGGNQATIPI
Sbjct: 361 DCRMILTRNDGEWNLD-HQSEEAEAGTSYPTSDSNEDNSTECALPTVNAMDGGNQATIPI 420

Query: 421 IPQNFEEQMMLAMAVSLAEAREVSTGPGHSWQE 437
           IPQNFEEQMMLAMAVSLAEAREVSTGPGHSWQE
Sbjct: 421 IPQNFEEQMMLAMAVSLAEAREVSTGPGHSWQE 443

[Close]

BLAST of Lsi07G008520 vs. NCBI nr
Match: gi|778691423|ref|XP_011653274.1| (PREDICTED: uncharacterized protein LOC101215345 isoform X1 [Cucumis sativus])

HSP 1 Score: 725.3 bits (1871), Expect = 6.2e-206
Identity = 387/453 (85.43%), Postives = 403/453 (88.96%), Query Frame = 1


Query: 1   MGNKLGRRRQMVDEKYTRPQGLYNHKEVDHKKLRKLILESKLAPCYPGDEESASDLEECP 60
           MGNKLGRRRQ+VDEKYTRPQGLYNHKEVDHKKLRKLILESKLAPCYPGDEESASDLEECP
Sbjct: 1   MGNKLGRRRQIVDEKYTRPQGLYNHKEVDHKKLRKLILESKLAPCYPGDEESASDLEECP 60

Query: 61  ICFLFTLKLYFTTVML------VYLNLR--------RCPFCKTSNYAVEYRGVKSKEEKS 120
           ICFL+   L  +   +       +L ++        +CP+CKTSNYAVEYRGVKSKEEKS
Sbjct: 61  ICFLYYPSLNRSRCCMKSICTECFLQMKVPNSTRPTQCPYCKTSNYAVEYRGVKSKEEKS 120

Query: 121 LEQIEEQRVIEAKIRIRQQELQDDEERMQKRHELSTSNADTTVEDGEDSPAAGRILHHSV 180
           LEQIEEQRVIEAKIRIRQQELQDDEERMQKRHELSTSNADTTVE+GEDSPAA       V
Sbjct: 121 LEQIEEQRVIEAKIRIRQQELQDDEERMQKRHELSTSNADTTVENGEDSPAA-------V 180

Query: 181 PSSQSPAEDEEIVSLPDSCMTQIRPPPPPMPIRSNR---DDEFDKDLEDIMVMEAIWLSI 240
           PSSQSPAEDEEIVSL D CMTQIRPPPPP+PIRSNR   DDEFD DLEDIMVMEAIWLSI
Sbjct: 181 PSSQSPAEDEEIVSLQDPCMTQIRPPPPPIPIRSNRNFRDDEFDLDLEDIMVMEAIWLSI 240

Query: 241 QEKERHKDPVYAEAASSDQYATEGRYVSQATIPLAGTSSSPSGGLACAIAALAEQQQLQL 300
           QEK R+KDPVYAEAASSDQYATEGRYVS ATIPLAGTSSSPSGGLACAIAALAEQQQ+  
Sbjct: 241 QEKGRNKDPVYAEAASSDQYATEGRYVSPATIPLAGTSSSPSGGLACAIAALAEQQQI-- 300

Query: 301 GRGPSSNCTNGDSPVFNMLPGATEFYNRMNTNVENYPPAQVSISAENYAPAQVSTINTVP 360
           GRGPSS CTNGDSPVF MLPGATEFYNRMNTNVENYPP Q SISAENYAPAQVST++TVP
Sbjct: 301 GRGPSSTCTNGDSPVFTMLPGATEFYNRMNTNVENYPPTQGSISAENYAPAQVSTVDTVP 360

Query: 361 DCRMILTRNDGEWNLDHHQSEEAEAGTSYPTSDSTEDNGTECSLPTANAMDGGNQATIPI 420
           DCRMILTRNDGEWNLD HQSEEAEAGTSYPTSD  EDN TEC+LPT NAMDGGNQATIPI
Sbjct: 361 DCRMILTRNDGEWNLD-HQSEEAEAGTSYPTSDLNEDNSTECALPTVNAMDGGNQATIPI 420

Query: 421 IPQNFEEQMMLAMAVSLAEAREVSTGPGHSWQE 437
           IPQNFEEQMMLAMAVSLAEAREVSTGPGHSWQE
Sbjct: 421 IPQNFEEQMMLAMAVSLAEAREVSTGPGHSWQE 443

[Close]

BLAST of Lsi07G008520 vs. NCBI nr
Match: gi|659101786|ref|XP_008451792.1| (PREDICTED: uncharacterized protein LOC103492971 isoform X3 [Cucumis melo])

HSP 1 Score: 713.8 bits (1841), Expect = 1.9e-202
Identity = 382/453 (84.33%), Postives = 395/453 (87.20%), Query Frame = 1


Query: 1   MGNKLGRRRQMVDEKYTRPQGLYNHKEVDHKKLRKLILESKLAPCYPGDEESASDLEECP 60
           MGNKLGRRRQMVDEKYTRPQGLYNHKEVDHKKLRKLILESKLAPCYPGDEESASDLEECP
Sbjct: 1   MGNKLGRRRQMVDEKYTRPQGLYNHKEVDHKKLRKLILESKLAPCYPGDEESASDLEECP 60

Query: 61  ICFLFTLKLYFTTVML------VYLNLR--------RCPFCKTSNYAVEYRGVKSKEEKS 120
           ICFL+   L  +   +       +L ++        +CPFCKTSNYAVEYRGVKSKEEKS
Sbjct: 61  ICFLYYPSLNRSRCCMKSICTECFLQMKVPNSTRPTQCPFCKTSNYAVEYRGVKSKEEKS 120

Query: 121 LEQIEEQRVIEAKIRIRQQELQDDEERMQKRHELSTSNADTTVEDGEDSPAAGRILHHSV 180
           LEQIEEQRVIEAKIRIRQQELQDDEERMQKRHELSTSNADTTVE+               
Sbjct: 121 LEQIEEQRVIEAKIRIRQQELQDDEERMQKRHELSTSNADTTVENA-------------- 180

Query: 181 PSSQSPAEDEEIVSLPDSCMTQIRPPPPPMPIRSNR---DDEFDKDLEDIMVMEAIWLSI 240
           PSSQSPAEDEEIVSL D CMT IRPPPPP+PIRSNR   DDEFD DLEDIMVMEAIWLSI
Sbjct: 181 PSSQSPAEDEEIVSLQDPCMTPIRPPPPPIPIRSNRNFRDDEFDLDLEDIMVMEAIWLSI 240

Query: 241 QEKERHKDPVYAEAASSDQYATEGRYVSQATIPLAGTSSSPSGGLACAIAALAEQQQLQL 300
           QEK RHKDPVYAEAASSDQYATEGRYVS ATIPLAGTSSSPSGGLACAIAALAEQQQ+  
Sbjct: 241 QEKGRHKDPVYAEAASSDQYATEGRYVSPATIPLAGTSSSPSGGLACAIAALAEQQQIS- 300

Query: 301 GRGPSSNCTNGDSPVFNMLPGATEFYNRMNTNVENYPPAQVSISAENYAPAQVSTINTVP 360
            RGPSS CTNGDSPVFNMLPGATEFYNRMNTNVENYPP QVSISAENYAPAQVS ++TVP
Sbjct: 301 -RGPSSACTNGDSPVFNMLPGATEFYNRMNTNVENYPPTQVSISAENYAPAQVSAVDTVP 360

Query: 361 DCRMILTRNDGEWNLDHHQSEEAEAGTSYPTSDSTEDNGTECSLPTANAMDGGNQATIPI 420
           DCRMILTRNDGEWNLD HQSEEAEAGTSYPTSDS EDN TEC+LPT NAMDGGNQATIPI
Sbjct: 361 DCRMILTRNDGEWNLD-HQSEEAEAGTSYPTSDSNEDNSTECALPTVNAMDGGNQATIPI 420

Query: 421 IPQNFEEQMMLAMAVSLAEAREVSTGPGHSWQE 437
           IPQNFEEQMMLAMAVSLAEAREVSTGPGHSWQE
Sbjct: 421 IPQNFEEQMMLAMAVSLAEAREVSTGPGHSWQE 436

The following BLAST results are available for this feature:

BLAST of Lsi07G008520 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Lsi07G008520 vs. TrEMBL


Match Name	E-value	Identity	Description
B9GGW3_POPTR	1.2e-115	57.05	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s38730g PE=4 SV=1	[more]
M5WH11_PRUPE	4.6e-115	56.76	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa006340mg PE=4 SV=1	[more]
V4T5F1_9ROSI	2.3e-114	56.52	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10020251mg PE=4 SV=1	[more]
A0A059BW47_EUCGR	5.1e-114	57.11	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F03204 PE=4 SV=1	[more]
A0A076JXY8_VITVI	4.8e-112	54.19	RING-type E3 ubiquitin ligase OS=Vitis vinifera GN=GW2 PE=2 SV=1	[more]

BLAST of Lsi07G008520 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G78420.1	2.0e-69	41.69	RING/U-box superfamily protein	[more]
AT1G17145.1	2.3e-65	49.85	RING/U-box superfamily protein	[more]

BLAST of Lsi07G008520 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659101784\|ref\|XP_008451791.1\|	2.3e-208	86.22	PREDICTED: uncharacterized protein LOC103492971 isoform X2 [Cucumis melo]	[more]
gi\|449438951\|ref\|XP_004137251.1\|	1.5e-207	86.00	PREDICTED: uncharacterized protein LOC101215345 isoform X2 [Cucumis sativus]	[more]
gi\|659101778\|ref\|XP_008451788.1\|	9.6e-207	85.65	PREDICTED: uncharacterized protein LOC103492971 isoform X1 [Cucumis melo]	[more]
gi\|778691423\|ref\|XP_011653274.1\|	6.2e-206	85.43	PREDICTED: uncharacterized protein LOC101215345 isoform X1 [Cucumis sativus]	[more]
gi\|659101786\|ref\|XP_008451792.1\|	1.9e-202	84.33	PREDICTED: uncharacterized protein LOC103492971 isoform X3 [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0008152	metabolic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0016874	ligase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi07G008520.1	Lsi07G008520.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR31315	FAMILY NOT NAMED	coord: 1..436 score: 7.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi07G008520	Csa4G075220	Cucumber (Chinese Long) v2	culsiB314
Lsi07G008520	CSPI04G07600	Wild cucumber (PI 183967)	cpilsiB314
Lsi07G008520	CmaCh04G006480	Cucurbita maxima (Rimu)	cmalsiB695
Lsi07G008520	CmaCh16G004550	Cucurbita maxima (Rimu)	cmalsiB325
Lsi07G008520	CmoCh16G004900	Cucurbita moschata (Rifu)	cmolsiB314
Lsi07G008520	CmoCh04G006960	Cucurbita moschata (Rifu)	cmolsiB689
Lsi07G008520	Cla005399	Watermelon (97103) v1	lsiwmB440
Lsi07G008520	MELO3C016154	Melon (DHL92) v3.5.1	lsimeB455
Lsi07G008520	ClCG07G010480	Watermelon (Charleston Gray)	lsiwcgB412
Lsi07G008520	MELO3C016154.2	Melon (DHL92) v3.6.1	lsimedB472
Lsi07G008520	Cla97C07G137180	Watermelon (97103) v2	lsiwmbB411
Lsi07G008520	Bhi01G002435	Wax gourd	lsiwgoB544
Lsi07G008520	Cp4.1LG01g00910	Cucurbita pepo (Zucchini)	cpelsiB372
Lsi07G008520	Cp4.1LG14g03370	Cucurbita pepo (Zucchini)	cpelsiB184
Lsi07G008520	CsGy4G007520	Cucumber (Gy14) v2	cgyblsiB278
Lsi07G008520	Carg13103	Silver-seed gourd	carlsiB043
Lsi07G008520	Carg11380	Silver-seed gourd	carlsiB596
Lsi07G008520	CsaV3_4G007810	Cucumber (Chinese Long) v3	cuclsiB333

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi07G008520	Wild cucumber (PI 183967)	cpilsiB304
Lsi07G008520	Cucumber (Chinese Long) v2	culsiB304
Lsi07G008520	Cucumber (Gy14) v2	cgyblsiB288
Lsi07G008520	Cucumber (Chinese Long) v3	cuclsiB323