Csa4G075220 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa4G075220
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionRing E3 ubiquitin ligase
LocationChr4 : 5355498 .. 5356744 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCCTTCTATCCGTTGGCTTAATTATTATGGTTGACTTAATAATAGAATAGCTACTATTAAATTTATGTACATTGTGTATTGAGTGTAGGACTTCAAGCTTCATTTGTACGGAAGACAAATAGTGGGAGTTTGTAGCTTGAAAATATGTAAAAATGTTTATGAATCTAGTAAAGAAAAAGAAAAAGAAAGTATTGATTATTTATGCTTTGATGGTTTGCCTCCTAGCTCTTTCACATTTGAATAGCTGTAGTATGGTTTTGTTCATGGTTACTTAATTAAATTGTATAAAATTTGTAATCTTCAGGAGAAAGGAAGGAATAAAGATCCCGTTTATGCTGAGGCTGCTTCTTCTGATCAATATGCCACAGAAGGTAGATATGTCTCTCCAGCCACCATTCCGTTGGCTGGAACATCATCATCCCCATCTGGAGGTCTTGCTTGTGCCATAGCTGCTCTTGCAGAACAGCAGCAGATTGGCAGGGGACCATCATCCACTTGCACAAATGGAGATTCACCTGTTTTCACCATGCTTCCTGGAGCCACGGAATTCTACAACAGGATGAACACCAATGTAGAAAACTATCCACCCACCCAAGGCTCCATCAGTGCAGAAAACTATGCACCTGCACAAGTTTCGACAGTCGACACAGTACCAGACTGTAGGATGATCTTAACAAGAAATGATGGAGAGTGGAATCTCGACCATCAATCAGAAGAAGCTGAAGCTGGGACAAGCTACCCAACATCAGACTTGAACGAAGATAACAGTACTGAATGTGCTCTACCCACAGTGAATGCAATGGATGGTGGAAACCAAGCAACAATACCCATCATTCCTCAAAATTTTGAAGAGCAGATGATGCTGGCCATGGCCGTTTCTCTAGCAGAGGCTCGAGAAGTGTCTACCGGACCAGGGCATTCCTGGCAGGAGTGATATTGTGATCATATCTAAACTGGAAGATTCGACTGTAATCAACATGAATATGGCTGGCAGAGCAATGGTTGTCGAAGCGGAACTGGCTAGCTAGGGAATTCAGACAAAGGGGAAAGCAGAGAAAGGAGTGGCACGATGCTTGTTTATTCAAAAGTTGAAGGTAGCGCAACTCCTCCTCCCCCAGCCCCTCGGGTGAAAAAAAAAATGAAGGGGAAAAAAATGGAATACAAATTCTTTTAGTGAATTAAAAACTTGGTGGTTCATTCAAGTTCATGGTTGCCAATATGTGTCTCTCTTTTTTCTTTTTTT

mRNA sequence

ATGGCCCTTCTATCCGAGAAAGGAAGGAATAAAGATCCCGTTTATGCTGAGGCTGCTTCTTCTGATCAATATGCCACAGAAGGTAGATATGTCTCTCCAGCCACCATTCCGTTGGCTGGAACATCATCATCCCCATCTGGAGGTCTTGCTTGTGCCATAGCTGCTCTTGCAGAACAGCAGCAGATTGGCAGGGGACCATCATCCACTTGCACAAATGGAGATTCACCTGTTTTCACCATGCTTCCTGGAGCCACGGAATTCTACAACAGGATGAACACCAATGTAGAAAACTATCCACCCACCCAAGGCTCCATCAGTGCAGAAAACTATGCACCTGCACAAGTTTCGACAGTCGACACAGTACCAGACTGTAGGATGATCTTAACAAGAAATGATGGAGAGTGGAATCTCGACCATCAATCAGAAGAAGCTGAAGCTGGGACAAGCTACCCAACATCAGACTTGAACGAAGATAACAGTACTGAATGTGCTCTACCCACAGTGAATGCAATGGATGGTGGAAACCAAGCAACAATACCCATCATTCCTCAAAATTTTGAAGAGCAGATGATGCTGGCCATGGCCGTTTCTCTAGCAGAGGCTCGAGAAGTGTCTACCGGACCAGGGCATTCCTGGCAGGAGTGA

Coding sequence (CDS)

ATGGCCCTTCTATCCGAGAAAGGAAGGAATAAAGATCCCGTTTATGCTGAGGCTGCTTCTTCTGATCAATATGCCACAGAAGGTAGATATGTCTCTCCAGCCACCATTCCGTTGGCTGGAACATCATCATCCCCATCTGGAGGTCTTGCTTGTGCCATAGCTGCTCTTGCAGAACAGCAGCAGATTGGCAGGGGACCATCATCCACTTGCACAAATGGAGATTCACCTGTTTTCACCATGCTTCCTGGAGCCACGGAATTCTACAACAGGATGAACACCAATGTAGAAAACTATCCACCCACCCAAGGCTCCATCAGTGCAGAAAACTATGCACCTGCACAAGTTTCGACAGTCGACACAGTACCAGACTGTAGGATGATCTTAACAAGAAATGATGGAGAGTGGAATCTCGACCATCAATCAGAAGAAGCTGAAGCTGGGACAAGCTACCCAACATCAGACTTGAACGAAGATAACAGTACTGAATGTGCTCTACCCACAGTGAATGCAATGGATGGTGGAAACCAAGCAACAATACCCATCATTCCTCAAAATTTTGAAGAGCAGATGATGCTGGCCATGGCCGTTTCTCTAGCAGAGGCTCGAGAAGTGTCTACCGGACCAGGGCATTCCTGGCAGGAGTGA

Protein sequence

MALLSEKGRNKDPVYAEAASSDQYATEGRYVSPATIPLAGTSSSPSGGLACAIAALAEQQQIGRGPSSTCTNGDSPVFTMLPGATEFYNRMNTNVENYPPTQGSISAENYAPAQVSTVDTVPDCRMILTRNDGEWNLDHQSEEAEAGTSYPTSDLNEDNSTECALPTVNAMDGGNQATIPIIPQNFEEQMMLAMAVSLAEAREVSTGPGHSWQE*
Homology
[Close]
BLAST of Csa4G075220 vs. TrEMBL
Match: A0A0A0L0A5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G075220 PE=4 SV=1)

HSP 1 Score: 434.9 bits (1117), Expect = 5.8e-119
Identity = 214/214 (100.00%), Postives = 214/214 (100.00%), Query Frame = 1 

Query: 1   MALLSEKGRNKDPVYAEAASSDQYATEGRYVSPATIPLAGTSSSPSGGLACAIAALAEQQ 60
           MALLSEKGRNKDPVYAEAASSDQYATEGRYVSPATIPLAGTSSSPSGGLACAIAALAEQQ
Sbjct: 1   MALLSEKGRNKDPVYAEAASSDQYATEGRYVSPATIPLAGTSSSPSGGLACAIAALAEQQ 60

Query: 61  QIGRGPSSTCTNGDSPVFTMLPGATEFYNRMNTNVENYPPTQGSISAENYAPAQVSTVDT 120
           QIGRGPSSTCTNGDSPVFTMLPGATEFYNRMNTNVENYPPTQGSISAENYAPAQVSTVDT
Sbjct: 61  QIGRGPSSTCTNGDSPVFTMLPGATEFYNRMNTNVENYPPTQGSISAENYAPAQVSTVDT 120

Query: 121 VPDCRMILTRNDGEWNLDHQSEEAEAGTSYPTSDLNEDNSTECALPTVNAMDGGNQATIP 180
           VPDCRMILTRNDGEWNLDHQSEEAEAGTSYPTSDLNEDNSTECALPTVNAMDGGNQATIP
Sbjct: 121 VPDCRMILTRNDGEWNLDHQSEEAEAGTSYPTSDLNEDNSTECALPTVNAMDGGNQATIP 180

Query: 181 IIPQNFEEQMMLAMAVSLAEAREVSTGPGHSWQE 215
           IIPQNFEEQMMLAMAVSLAEAREVSTGPGHSWQE
Sbjct: 181 IIPQNFEEQMMLAMAVSLAEAREVSTGPGHSWQE 214

[Close]
BLAST of Csa4G075220 vs. TrEMBL
Match: W9REB0_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_022476 PE=4 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 9.1e-48
Identity = 111/213 (52.11%), Postives = 137/213 (64.32%), Query Frame = 1 

Query: 4   LSEKGRNKDPVYAEAASSDQYATEGRYVSPATIPLAGTSSS--PSGGLACAIAALAEQQQ 63
           + E GRNK     +A SS QY TE  YVSP+  P+AG+SSS  PSGGLACAIAALAE+QQ
Sbjct: 212 IQESGRNKTSNIVDAPSSGQYVTEDCYVSPSLAPVAGSSSSSSPSGGLACAIAALAERQQ 271

Query: 64  IGRGPSSTCTNGDSPVFTMLPGATEFYNRMNTNVENYPPTQGSISAENYAPAQVSTVDTV 123
           +G G SST   G+   F M+PGA+ FYNR + + E YPP   S +               
Sbjct: 272 MG-GESSTNPGGNGSAFNMVPGASRFYNRADRDAETYPPAVNSTAVS------------- 331

Query: 124 PDCRMILTRNDGEWNLDHQSEEAEAGTSYPTSDLNEDNSTECALPTVNAMDGGNQ-ATIP 183
           P C M L R+D EWN+DH SE AEAGTSY +SD  ED  +  ALP  N ++G  Q    P
Sbjct: 332 PKCAMALPRDDREWNIDHGSEVAEAGTSYASSDAAEDAGSMSALPPPNQIEGNLQNVPEP 391

Query: 184 IIPQNFEEQMMLAMAVSLAEAREVSTGPGHSWQ 214
           I+P++FEEQMMLAMA+SLAEAR ++ G G +WQ
Sbjct: 392 IVPESFEEQMMLAMALSLAEARAMAGGQGVTWQ 410

[Close]
BLAST of Csa4G075220 vs. TrEMBL
Match: V4T5F1_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10020251mg PE=4 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 1.6e-47
Identity = 110/221 (49.77%), Postives = 142/221 (64.25%), Query Frame = 1 

Query: 4   LSEKGRNKDPVYAEAASSDQYATEGRYVSPATIPLAGTSSSPSGGLACAIAALAEQQQIG 63
           + E GR ++P Y EAA S+QY TE RYVS    P+AG+SSSPSGGLACAIAALAE+QQ+ 
Sbjct: 222 IQENGRQRNPTYEEAAPSEQYVTEDRYVSSTMAPIAGSSSSPSGGLACAIAALAERQQVS 281

Query: 64  RGPSSTCTNGDSPVFTMLPGATEFYNRMNTNVENYPPTQGSISAENYAPAQVSTVDTVPD 123
            G SS    G+   F M PG++  YNRM+ +VENY P +             S ++T PD
Sbjct: 282 -GESSINHGGNMSSFNMFPGSSRLYNRMDHDVENYAPAE-------------SLINTSPD 341

Query: 124 CRMILTRNDGEWNLDHQSEEAEAGTSYPTSDLNEDNSTECALPT----VNAMD-----GG 183
            RM + R++GEW +D  SE AEAGTSY +SD+ ED     +LP     ++++      GG
Sbjct: 342 GRMTVARDEGEWGIDRGSELAEAGTSYASSDMAEDGGGISSLPEDGGGISSLSPTEEIGG 401

Query: 184 NQATI--PIIPQNFEEQMMLAMAVSLAEAREVSTGPGHSWQ 214
           N   +  PI+P++FEEQMMLAMA SLAEAR +S GP  SWQ
Sbjct: 402 NFQNVPGPIVPESFEEQMMLAMAASLAEARPMSNGPEVSWQ 428

[Close]
BLAST of Csa4G075220 vs. TrEMBL
Match: V4VR33_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10020251mg PE=4 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 1.6e-47
Identity = 110/221 (49.77%), Postives = 142/221 (64.25%), Query Frame = 1 

Query: 4   LSEKGRNKDPVYAEAASSDQYATEGRYVSPATIPLAGTSSSPSGGLACAIAALAEQQQIG 63
           + E GR ++P Y EAA S+QY TE RYVS    P+AG+SSSPSGGLACAIAALAE+QQ+ 
Sbjct: 127 IQENGRQRNPTYEEAAPSEQYVTEDRYVSSTMAPIAGSSSSPSGGLACAIAALAERQQVS 186

Query: 64  RGPSSTCTNGDSPVFTMLPGATEFYNRMNTNVENYPPTQGSISAENYAPAQVSTVDTVPD 123
            G SS    G+   F M PG++  YNRM+ +VENY P +             S ++T PD
Sbjct: 187 -GESSINHGGNMSSFNMFPGSSRLYNRMDHDVENYAPAE-------------SLINTSPD 246

Query: 124 CRMILTRNDGEWNLDHQSEEAEAGTSYPTSDLNEDNSTECALPT----VNAMD-----GG 183
            RM + R++GEW +D  SE AEAGTSY +SD+ ED     +LP     ++++      GG
Sbjct: 247 GRMTVARDEGEWGIDRGSELAEAGTSYASSDMAEDGGGISSLPEDGGGISSLSPTEEIGG 306

Query: 184 NQATI--PIIPQNFEEQMMLAMAVSLAEAREVSTGPGHSWQ 214
           N   +  PI+P++FEEQMMLAMA SLAEAR +S GP  SWQ
Sbjct: 307 NFQNVPGPIVPESFEEQMMLAMAASLAEARPMSNGPEVSWQ 333

[Close]
BLAST of Csa4G075220 vs. TrEMBL
Match: B9GGW3_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s38730g PE=4 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 8.5e-46
Identity = 107/215 (49.77%), Postives = 137/215 (63.72%), Query Frame = 1 

Query: 4   LSEKGRNKDPVYAEAASSDQYATEGRYVSPATI-PLAGTSSSPSGGLACAIAALAEQQQI 63
           + E GR K+P+  +AA   QY  E RYV+PA   PLAG+SSSPSGGLACAIAALAE+QQ 
Sbjct: 223 IQENGRQKNPLCGDAAPPAQYTMEARYVTPAMAPPLAGSSSSPSGGLACAIAALAERQQT 282

Query: 64  GRGPSSTCTNGDSPVFTMLPGATEFYNRMNTNVENYPPTQGSISAENYAPAQVSTVDTVP 123
           G G S    +G+ P F MLP  + FYNR+  + +NY P Q             S+ + +P
Sbjct: 283 G-GESIVHNSGNMPSFNMLPSTSSFYNRLEQDADNYSPAQ-------------SSSNVLP 342

Query: 124 DCRMILTRNDGEWNLDHQSEEAEAGTSYPTSDLNEDNSTECAL----PTVNAMDGGNQAT 183
           DCRMI+TR+DGEW  D  S+ AEAGTSY +S+  ED     +L    P  + + G  Q  
Sbjct: 343 DCRMIVTRDDGEWGADRGSDAAEAGTSYASSETAEDAGGISSLLPPPPPTDEIGGSFQNV 402

Query: 184 IPIIPQNFEEQMMLAMAVSLAEAREVSTGPGHSWQ 214
              IP++FEEQMMLAMAVSLAEAR +++GP  +WQ
Sbjct: 403 SGPIPESFEEQMMLAMAVSLAEARAMTSGPQSAWQ 423

[Close]
BLAST of Csa4G075220 vs. TAIR10
Match: AT1G78420.1 (AT1G78420.1 RING/U-box superfamily protein)

HSP 1 Score: 68.6 bits (166), Expect = 5.5e-12
Identity = 62/210 (29.52%), Postives = 86/210 (40.95%), Query Frame = 1 

Query: 4   LSEKGRNKDPVYAEAASSDQYATEGR-YVS--PATIPLA--GTSSSPSGGLACAIAALAE 63
           + E G  ++    E  SS QY T+   YVS  P   P+    T SS SGGL+CAI+ALAE
Sbjct: 225 VQETGTQRNSASGEITSSRQYVTDNHSYVSSPPRVTPIVEPATPSSSSGGLSCAISALAE 284

Query: 64  QQQIGRGPSSTCTNGDSPVFTMLPGATEFYNRMNTNVENYPPTQGSISAENYAPAQVSTV 123
           +Q +G   S                     +  N NV +Y    G+  +      +V  +
Sbjct: 285 RQMVGESSSHN-------------------HNHNVNVSSYSMLPGNCDSYYDIEQEVDGI 344

Query: 124 DTVPDCRMILTRNDGEWNLDHQSEEAEAGTS--YPTSDLNEDNSTECALPTVNAMDGGNQ 183
           D     R             H  E  E G+S  Y +S +  +       P          
Sbjct: 345 DNHHHHR-------------HHYEMGETGSSNSYVSSYMTGEGFHNFPPPP--------- 392

Query: 184 ATIPIIPQNFEEQMMLAMAVSLAEAREVST 207
             + I+P++FEEQMM+AMAVS+AE    +T
Sbjct: 405 -PLVIVPESFEEQMMMAMAVSMAEVHATTT 392

[Close]
BLAST of Csa4G075220 vs. NCBI nr
Match: gi|700198383|gb|KGN53541.1| (hypothetical protein Csa_4G075220 [Cucumis sativus])

HSP 1 Score: 434.9 bits (1117), Expect = 8.3e-119
Identity = 214/214 (100.00%), Postives = 214/214 (100.00%), Query Frame = 1 

Query: 1   MALLSEKGRNKDPVYAEAASSDQYATEGRYVSPATIPLAGTSSSPSGGLACAIAALAEQQ 60
           MALLSEKGRNKDPVYAEAASSDQYATEGRYVSPATIPLAGTSSSPSGGLACAIAALAEQQ
Sbjct: 1   MALLSEKGRNKDPVYAEAASSDQYATEGRYVSPATIPLAGTSSSPSGGLACAIAALAEQQ 60

Query: 61  QIGRGPSSTCTNGDSPVFTMLPGATEFYNRMNTNVENYPPTQGSISAENYAPAQVSTVDT 120
           QIGRGPSSTCTNGDSPVFTMLPGATEFYNRMNTNVENYPPTQGSISAENYAPAQVSTVDT
Sbjct: 61  QIGRGPSSTCTNGDSPVFTMLPGATEFYNRMNTNVENYPPTQGSISAENYAPAQVSTVDT 120

Query: 121 VPDCRMILTRNDGEWNLDHQSEEAEAGTSYPTSDLNEDNSTECALPTVNAMDGGNQATIP 180
           VPDCRMILTRNDGEWNLDHQSEEAEAGTSYPTSDLNEDNSTECALPTVNAMDGGNQATIP
Sbjct: 121 VPDCRMILTRNDGEWNLDHQSEEAEAGTSYPTSDLNEDNSTECALPTVNAMDGGNQATIP 180

Query: 181 IIPQNFEEQMMLAMAVSLAEAREVSTGPGHSWQE 215
           IIPQNFEEQMMLAMAVSLAEAREVSTGPGHSWQE
Sbjct: 181 IIPQNFEEQMMLAMAVSLAEAREVSTGPGHSWQE 214

[Close]
BLAST of Csa4G075220 vs. NCBI nr
Match: gi|449438951|ref|XP_004137251.1| (PREDICTED: uncharacterized protein LOC101215345 isoform X2 [Cucumis sativus])

HSP 1 Score: 427.6 bits (1098), Expect = 1.3e-116
Identity = 209/211 (99.05%), Postives = 210/211 (99.53%), Query Frame = 1 

Query: 4   LSEKGRNKDPVYAEAASSDQYATEGRYVSPATIPLAGTSSSPSGGLACAIAALAEQQQIG 63
           + EKGRNKDPVYAEAASSDQYATEGRYVSPATIPLAGTSSSPSGGLACAIAALAEQQQIG
Sbjct: 230 IQEKGRNKDPVYAEAASSDQYATEGRYVSPATIPLAGTSSSPSGGLACAIAALAEQQQIG 289

Query: 64  RGPSSTCTNGDSPVFTMLPGATEFYNRMNTNVENYPPTQGSISAENYAPAQVSTVDTVPD 123
           RGPSSTCTNGDSPVFTMLPGATEFYNRMNTNVENYPPTQGSISAENYAPAQVSTVDTVPD
Sbjct: 290 RGPSSTCTNGDSPVFTMLPGATEFYNRMNTNVENYPPTQGSISAENYAPAQVSTVDTVPD 349

Query: 124 CRMILTRNDGEWNLDHQSEEAEAGTSYPTSDLNEDNSTECALPTVNAMDGGNQATIPIIP 183
           CRMILTRNDGEWNLDHQSEEAEAGTSYPTSDLNEDNSTECALPTVNAMDGGNQATIPIIP
Sbjct: 350 CRMILTRNDGEWNLDHQSEEAEAGTSYPTSDLNEDNSTECALPTVNAMDGGNQATIPIIP 409

Query: 184 QNFEEQMMLAMAVSLAEAREVSTGPGHSWQE 215
           QNFEEQMMLAMAVSLAEAREVSTGPGHSWQE
Sbjct: 410 QNFEEQMMLAMAVSLAEAREVSTGPGHSWQE 440

[Close]
BLAST of Csa4G075220 vs. NCBI nr
Match: gi|778691431|ref|XP_011653276.1| (PREDICTED: uncharacterized protein LOC101215345 isoform X3 [Cucumis sativus])

HSP 1 Score: 427.6 bits (1098), Expect = 1.3e-116
Identity = 209/211 (99.05%), Postives = 210/211 (99.53%), Query Frame = 1 

Query: 4   LSEKGRNKDPVYAEAASSDQYATEGRYVSPATIPLAGTSSSPSGGLACAIAALAEQQQIG 63
           + EKGRNKDPVYAEAASSDQYATEGRYVSPATIPLAGTSSSPSGGLACAIAALAEQQQIG
Sbjct: 226 IQEKGRNKDPVYAEAASSDQYATEGRYVSPATIPLAGTSSSPSGGLACAIAALAEQQQIG 285

Query: 64  RGPSSTCTNGDSPVFTMLPGATEFYNRMNTNVENYPPTQGSISAENYAPAQVSTVDTVPD 123
           RGPSSTCTNGDSPVFTMLPGATEFYNRMNTNVENYPPTQGSISAENYAPAQVSTVDTVPD
Sbjct: 286 RGPSSTCTNGDSPVFTMLPGATEFYNRMNTNVENYPPTQGSISAENYAPAQVSTVDTVPD 345

Query: 124 CRMILTRNDGEWNLDHQSEEAEAGTSYPTSDLNEDNSTECALPTVNAMDGGNQATIPIIP 183
           CRMILTRNDGEWNLDHQSEEAEAGTSYPTSDLNEDNSTECALPTVNAMDGGNQATIPIIP
Sbjct: 346 CRMILTRNDGEWNLDHQSEEAEAGTSYPTSDLNEDNSTECALPTVNAMDGGNQATIPIIP 405

Query: 184 QNFEEQMMLAMAVSLAEAREVSTGPGHSWQE 215
           QNFEEQMMLAMAVSLAEAREVSTGPGHSWQE
Sbjct: 406 QNFEEQMMLAMAVSLAEAREVSTGPGHSWQE 436

[Close]
BLAST of Csa4G075220 vs. NCBI nr
Match: gi|778691423|ref|XP_011653274.1| (PREDICTED: uncharacterized protein LOC101215345 isoform X1 [Cucumis sativus])

HSP 1 Score: 427.6 bits (1098), Expect = 1.3e-116
Identity = 209/211 (99.05%), Postives = 210/211 (99.53%), Query Frame = 1 

Query: 4   LSEKGRNKDPVYAEAASSDQYATEGRYVSPATIPLAGTSSSPSGGLACAIAALAEQQQIG 63
           + EKGRNKDPVYAEAASSDQYATEGRYVSPATIPLAGTSSSPSGGLACAIAALAEQQQIG
Sbjct: 233 IQEKGRNKDPVYAEAASSDQYATEGRYVSPATIPLAGTSSSPSGGLACAIAALAEQQQIG 292

Query: 64  RGPSSTCTNGDSPVFTMLPGATEFYNRMNTNVENYPPTQGSISAENYAPAQVSTVDTVPD 123
           RGPSSTCTNGDSPVFTMLPGATEFYNRMNTNVENYPPTQGSISAENYAPAQVSTVDTVPD
Sbjct: 293 RGPSSTCTNGDSPVFTMLPGATEFYNRMNTNVENYPPTQGSISAENYAPAQVSTVDTVPD 352

Query: 124 CRMILTRNDGEWNLDHQSEEAEAGTSYPTSDLNEDNSTECALPTVNAMDGGNQATIPIIP 183
           CRMILTRNDGEWNLDHQSEEAEAGTSYPTSDLNEDNSTECALPTVNAMDGGNQATIPIIP
Sbjct: 353 CRMILTRNDGEWNLDHQSEEAEAGTSYPTSDLNEDNSTECALPTVNAMDGGNQATIPIIP 412

Query: 184 QNFEEQMMLAMAVSLAEAREVSTGPGHSWQE 215
           QNFEEQMMLAMAVSLAEAREVSTGPGHSWQE
Sbjct: 413 QNFEEQMMLAMAVSLAEAREVSTGPGHSWQE 443

[Close]
BLAST of Csa4G075220 vs. NCBI nr
Match: gi|659101778|ref|XP_008451788.1| (PREDICTED: uncharacterized protein LOC103492971 isoform X1 [Cucumis melo])

HSP 1 Score: 411.8 bits (1057), Expect = 7.5e-112
Identity = 202/211 (95.73%), Postives = 204/211 (96.68%), Query Frame = 1 

Query: 4   LSEKGRNKDPVYAEAASSDQYATEGRYVSPATIPLAGTSSSPSGGLACAIAALAEQQQIG 63
           + EKGR+KDPVYAEAASSDQYATEGRYVSPATIPLAGTSSSPSGGLACAIAALAEQQQI 
Sbjct: 233 IQEKGRHKDPVYAEAASSDQYATEGRYVSPATIPLAGTSSSPSGGLACAIAALAEQQQIS 292

Query: 64  RGPSSTCTNGDSPVFTMLPGATEFYNRMNTNVENYPPTQGSISAENYAPAQVSTVDTVPD 123
           RGPSS CTNGDSPVF MLPGATEFYNRMNTNVENYPPTQ SISAENYAPAQVS VDTVPD
Sbjct: 293 RGPSSACTNGDSPVFNMLPGATEFYNRMNTNVENYPPTQVSISAENYAPAQVSAVDTVPD 352

Query: 124 CRMILTRNDGEWNLDHQSEEAEAGTSYPTSDLNEDNSTECALPTVNAMDGGNQATIPIIP 183
           CRMILTRNDGEWNLDHQSEEAEAGTSYPTSD NEDNSTECALPTVNAMDGGNQATIPIIP
Sbjct: 353 CRMILTRNDGEWNLDHQSEEAEAGTSYPTSDSNEDNSTECALPTVNAMDGGNQATIPIIP 412

Query: 184 QNFEEQMMLAMAVSLAEAREVSTGPGHSWQE 215
           QNFEEQMMLAMAVSLAEAREVSTGPGHSWQE
Sbjct: 413 QNFEEQMMLAMAVSLAEAREVSTGPGHSWQE 443

The following BLAST results are available for this feature:
BLAST of Csa4G075220 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L0A5_CUCSA5.8e-119100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_4G075220 PE=4 SV=1[more]
W9REB0_9ROSA9.1e-4852.11Uncharacterized protein OS=Morus notabilis GN=L484_022476 PE=4 SV=1[more]
V4T5F1_9ROSI1.6e-4749.77Uncharacterized protein OS=Citrus clementina GN=CICLE_v10020251mg PE=4 SV=1[more]
V4VR33_9ROSI1.6e-4749.77Uncharacterized protein OS=Citrus clementina GN=CICLE_v10020251mg PE=4 SV=1[more]
B9GGW3_POPTR8.5e-4649.77Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s38730g PE=4 SV=1[more]
BLAST of Csa4G075220 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G78420.15.5e-1229.52 RING/U-box superfamily protein[more]
BLAST of Csa4G075220 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700198383|gb|KGN53541.1|8.3e-119100.00hypothetical protein Csa_4G075220 [Cucumis sativus][more]
gi|449438951|ref|XP_004137251.1|1.3e-11699.05PREDICTED: uncharacterized protein LOC101215345 isoform X2 [Cucumis sativus][more]
gi|778691431|ref|XP_011653276.1|1.3e-11699.05PREDICTED: uncharacterized protein LOC101215345 isoform X3 [Cucumis sativus][more]
gi|778691423|ref|XP_011653274.1|1.3e-11699.05PREDICTED: uncharacterized protein LOC101215345 isoform X1 [Cucumis sativus][more]
gi|659101778|ref|XP_008451788.1|7.5e-11295.73PREDICTED: uncharacterized protein LOC103492971 isoform X1 [Cucumis melo][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU113244cucumber EST collection version 3.0transcribed_cluster
CU172292cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa4G075220.1Csa4G075220.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU113244CU113244transcribed_cluster
CU172292CU172292transcribed_cluster


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa4G075220Cla005399Watermelon (97103) v1cuwmB307
Csa4G075220MELO3C016154Melon (DHL92) v3.5.1cumeB314
Csa4G075220ClCG07G010480Watermelon (Charleston Gray)cuwcgB322
Csa4G075220Lsi07G008520Bottle gourd (USVL1VR-Ls)culsiB314
Csa4G075220MELO3C016154.2Melon (DHL92) v3.6.1cumedB290
Csa4G075220Cla97C07G137180Watermelon (97103) v2cuwmbB319
Csa4G075220Bhi01G002435Wax gourdcuwgoB365
Csa4G075220CSPI04G07600Wild cucumber (PI 183967)cpicuB182
Csa4G075220CmaCh16G004550Cucurbita maxima (Rimu)cmacuB337
Csa4G075220CmaCh04G006480Cucurbita maxima (Rimu)cmacuB708
Csa4G075220Cp4.1LG01g00910Cucurbita pepo (Zucchini)cpecuB399
Csa4G075220Cp4.1LG14g03370Cucurbita pepo (Zucchini)cpecuB221
Csa4G075220CsGy4G007520Cucumber (Gy14) v2cgybcuB165
Csa4G075220Carg11380Silver-seed gourdcarcuB0677
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa4G075220Wax gourdcuwgoB383
Csa4G075220Cucurbita maxima (Rimu)cmacuB336
Csa4G075220Cucurbita moschata (Rifu)cmocuB324
Csa4G075220Cucurbita moschata (Rifu)cmocuB325
Csa4G075220Cucurbita moschata (Rifu)cmocuB699
Csa4G075220Melon (DHL92) v3.5.1cumeB304
Csa4G075220Watermelon (Charleston Gray)cuwcgB324
Csa4G075220Watermelon (97103) v1cuwmB311
Csa4G075220Bottle gourd (USVL1VR-Ls)culsiB304
Csa4G075220Melon (DHL92) v3.6.1cumedB299
Csa4G075220Silver-seed gourdcarcuB0047
Csa4G075220Silver-seed gourdcarcuB0676
Csa4G075220Watermelon (97103) v2cuwmbB321