Lsi07G005090 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAATAATGGAATTGGAAGAGTTGGAGAGGAGAAGGGAAGAATTGAAAGCCATGAGCGAGATGCAAGAAGCTAGAGCGAATTACTATGACGCGAAATTACACAGTATAATTGTCGCGTATTTCATCTGGGAACGCATTTTCTTCTTTGGCATCTCCAAGAAAACTAATTCTCATTCTAATTATTTTTCCGGCAACTGGTGGGTGATTCTTGCTCTAAGCTGTGTATACAACCTCGTTTACATGTTGCTTTATCTCGACGCCGGGTTGATGCTCTACCGGACGGAGCAACAACTTGATTTGATTCTCAAGAAACATGCTCAACTTTATCAACAAATTTGGAGAATCAAACAAGAAGCTGACTCCATTGATTCTTCATCGATGGAGGCCGGAGACGAGTCCAGCCATGGACTCCGACAGGAGGAGGATGTAATGCTAAAACTAAACTCAAGTTCAACTTTTAGAAGGAGTGGGGAGAGGAAATTTTATATGTCCACCATTTTTTGTGCTTTGGTTGGTGTTGCTTCCTTAGAATTATATGCTTGCAAGTCTATGCTCTGCTCCTATTCAGTTATCTAA ATGGCAATAATGGAATTGGAAGAGTTGGAGAGGAGAAGGGAAGAATTGAAAGCCATGAGCGAGATGCAAGAAGCTAGAGCGAATTACTATGACGCGAAATTACACAGTATAATTGTCGCGTATTTCATCTGGGAACGCATTTTCTTCTTTGGCATCTCCAAGAAAACTAATTCTCATTCTAATTATTTTTCCGGCAACTGGTGGGTGATTCTTGCTCTAAGCTGTGTATACAACCTCGTTTACATGTTGCTTTATCTCGACGCCGGGTTGATGCTCTACCGGACGGAGCAACAACTTGATTTGATTCTCAAGAAACATGCTCAACTTTATCAACAAATTTGGAGAATCAAACAAGAAGCTGACTCCATTGATTCTTCATCGATGGAGGCCGGAGACGAGTCCAGCCATGGACTCCGACAGGAGGAGGATGTAATGCTAAAACTAAACTCAAGTTCAACTTTTAGAAGGAGTGGGGAGAGGAAATTTTATATGTCCACCATTTTTTGTGCTTTGGTTGGTGTTGCTTCCTTAGAATTATATGCTTGCAAGTCTATGCTCTGCTCCTATTCAGTTATCTAA ATGGCAATAATGGAATTGGAAGAGTTGGAGAGGAGAAGGGAAGAATTGAAAGCCATGAGCGAGATGCAAGAAGCTAGAGCGAATTACTATGACGCGAAATTACACAGTATAATTGTCGCGTATTTCATCTGGGAACGCATTTTCTTCTTTGGCATCTCCAAGAAAACTAATTCTCATTCTAATTATTTTTCCGGCAACTGGTGGGTGATTCTTGCTCTAAGCTGTGTATACAACCTCGTTTACATGTTGCTTTATCTCGACGCCGGGTTGATGCTCTACCGGACGGAGCAACAACTTGATTTGATTCTCAAGAAACATGCTCAACTTTATCAACAAATTTGGAGAATCAAACAAGAAGCTGACTCCATTGATTCTTCATCGATGGAGGCCGGAGACGAGTCCAGCCATGGACTCCGACAGGAGGAGGATGTAATGCTAAAACTAAACTCAAGTTCAACTTTTAGAAGGAGTGGGGAGAGGAAATTTTATATGTCCACCATTTTTTGTGCTTTGGTTGGTGTTGCTTCCTTAGAATTATATGCTTGCAAGTCTATGCTCTGCTCCTATTCAGTTATCTAA MAIMELEELERRREELKAMSEMQEARANYYDAKLHSIIVAYFIWERIFFFGISKKTNSHSNYFSGNWWVILALSCVYNLVYMLLYLDAGLMLYRTEQQLDLILKKHAQLYQQIWRIKQEADSIDSSSMEAGDESSHGLRQEEDVMLKLNSSSTFRRSGERKFYMSTIFCALVGVASLELYACKSMLCSYSVI
BLAST of Lsi07G005090 vs. TrEMBL
Match: A0A0A0L822_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G484330 PE=4 SV=1) HSP 1 Score: 229.9 bits (585), Expect = 2.5e-57 Identity = 135/190 (71.05%), Postives = 150/190 (78.95%), Query Frame = 1
BLAST of Lsi07G005090 vs. TrEMBL
Match: A0A0A0KUT0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G562290 PE=4 SV=1) HSP 1 Score: 113.2 bits (282), Expect = 3.4e-22 Identity = 68/190 (35.79%), Postives = 114/190 (60.00%), Query Frame = 1
BLAST of Lsi07G005090 vs. TrEMBL
Match: A0A0A0KJZ3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G139810 PE=4 SV=1) HSP 1 Score: 94.0 bits (232), Expect = 2.2e-16 Identity = 65/188 (34.57%), Postives = 107/188 (56.91%), Query Frame = 1
BLAST of Lsi07G005090 vs. TrEMBL
Match: E5GBE1_CUCME (Putative uncharacterized protein OS=Cucumis melo subsp. melo PE=4 SV=1) HSP 1 Score: 85.5 bits (210), Expect = 7.7e-14 Identity = 63/189 (33.33%), Postives = 99/189 (52.38%), Query Frame = 1
BLAST of Lsi07G005090 vs. TrEMBL
Match: A0A0A0KM15_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G139820 PE=4 SV=1) HSP 1 Score: 82.8 bits (203), Expect = 5.0e-13 Identity = 63/187 (33.69%), Postives = 98/187 (52.41%), Query Frame = 1
BLAST of Lsi07G005090 vs. NCBI nr
Match: gi|700202942|gb|KGN58075.1| (hypothetical protein Csa_3G484330 [Cucumis sativus]) HSP 1 Score: 229.9 bits (585), Expect = 3.6e-57 Identity = 135/190 (71.05%), Postives = 150/190 (78.95%), Query Frame = 1
BLAST of Lsi07G005090 vs. NCBI nr
Match: gi|700196294|gb|KGN51471.1| (hypothetical protein Csa_5G562290 [Cucumis sativus]) HSP 1 Score: 113.2 bits (282), Expect = 4.9e-22 Identity = 68/190 (35.79%), Postives = 114/190 (60.00%), Query Frame = 1
BLAST of Lsi07G005090 vs. NCBI nr
Match: gi|700194726|gb|KGN49903.1| (hypothetical protein Csa_5G139810 [Cucumis sativus]) HSP 1 Score: 94.0 bits (232), Expect = 3.1e-16 Identity = 65/188 (34.57%), Postives = 107/188 (56.91%), Query Frame = 1
BLAST of Lsi07G005090 vs. NCBI nr
Match: gi|307135919|gb|ADN33782.1| (hypothetical protein [Cucumis melo subsp. melo]) HSP 1 Score: 85.5 bits (210), Expect = 1.1e-13 Identity = 63/189 (33.33%), Postives = 99/189 (52.38%), Query Frame = 1
BLAST of Lsi07G005090 vs. NCBI nr
Match: gi|700194727|gb|KGN49904.1| (hypothetical protein Csa_5G139820 [Cucumis sativus]) HSP 1 Score: 82.8 bits (203), Expect = 7.2e-13 Identity = 63/187 (33.69%), Postives = 98/187 (52.41%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |