CsaV3_3G024990 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATCTCATCCTGTATTTTTCTTCTTCATGACAACAATAATGGAACTTGAAGAGTTGGAGAAGAGAATGGAAGAACTGAAAGCTATGAGCGAGAAGCAAGAAGCCACAGCAAATTACTACGACACCAAGTTGCACACTATAATTGCCGCCTATTTCATTTGGGAACGCGCTTTCTGCTTCGCCATCTCCAACAAAACTAATTCTCCTAATTATTTCTCCTCCCTCATCTGCCATGCCAACTGGCGCCTCATTCTTGCTCTAAGCTCTTTGTACAGCCTTGTTTACATTCTGCTTTATCTCGATGCTGCGTTGATGCTCTACCGGTCAGAACTAAAGCAAAATTTGATTCTCAACAAACATGCTCAACTTTATCATCAAATTTCGAAAATCAAACAAGAATTTAACTCCATTGATTCTTCATCCATGGAGGCTGAAGAGGATTTAATACTCTTGATAAACTCAAGTTCAACCTTTAGGAGGAGTGAGGAGAGAATATTTTATATGTCCACCATTTTCTGTGCTTTGGTTTGTGTTGCTTCTCTAGAATTATATGCTTGCAAGTCTATTCTTTGTTCATAATTAAGTTGCACTGGTCTTTTTGCAGTTCATATAATAGTTTTATTTAAGTATTAAGGTTTGTTAAGAGTTGGAGGTGTGGCACCTTAGGATGTAACAAATGTTTCCTTTAATTTTATATAATATGTG ATGACAACAATAATGGAACTTGAAGAGTTGGAGAAGAGAATGGAAGAACTGAAAGCTATGAGCGAGAAGCAAGAAGCCACAGCAAATTACTACGACACCAAGTTGCACACTATAATTGCCGCCTATTTCATTTGGGAACGCGCTTTCTGCTTCGCCATCTCCAACAAAACTAATTCTCCTAATTATTTCTCCTCCCTCATCTGCCATGCCAACTGGCGCCTCATTCTTGCTCTAAGCTCTTTGTACAGCCTTGTTTACATTCTGCTTTATCTCGATGCTGCGTTGATGCTCTACCGGTCAGAACTAAAGCAAAATTTGATTCTCAACAAACATGCTCAACTTTATCATCAAATTTCGAAAATCAAACAAGAATTTAACTCCATTGATTCTTCATCCATGGAGGCTGAAGAGGATTTAATACTCTTGATAAACTCAAGTTCAACCTTTAGGAGGAGTGAGGAGAGAATATTTTATATGTCCACCATTTTCTGTGCTTTGGTTTGTGTTGCTTCTCTAGAATTATATGCTTGCAAGTCTATTCTTTGTTCATAA ATGACAACAATAATGGAACTTGAAGAGTTGGAGAAGAGAATGGAAGAACTGAAAGCTATGAGCGAGAAGCAAGAAGCCACAGCAAATTACTACGACACCAAGTTGCACACTATAATTGCCGCCTATTTCATTTGGGAACGCGCTTTCTGCTTCGCCATCTCCAACAAAACTAATTCTCCTAATTATTTCTCCTCCCTCATCTGCCATGCCAACTGGCGCCTCATTCTTGCTCTAAGCTCTTTGTACAGCCTTGTTTACATTCTGCTTTATCTCGATGCTGCGTTGATGCTCTACCGGTCAGAACTAAAGCAAAATTTGATTCTCAACAAACATGCTCAACTTTATCATCAAATTTCGAAAATCAAACAAGAATTTAACTCCATTGATTCTTCATCCATGGAGGCTGAAGAGGATTTAATACTCTTGATAAACTCAAGTTCAACCTTTAGGAGGAGTGAGGAGAGAATATTTTATATGTCCACCATTTTCTGTGCTTTGGTTTGTGTTGCTTCTCTAGAATTATATGCTTGCAAGTCTATTCTTTGTTCATAA MTTIMELEELEKRMEELKAMSEKQEATANYYDTKLHTIIAAYFIWERAFCFAISNKTNSPNYFSSLICHANWRLILALSSLYSLVYILLYLDAALMLYRSELKQNLILNKHAQLYHQISKIKQEFNSIDSSSMEAEEDLILLINSSSTFRRSEERIFYMSTIFCALVCVASLELYACKSILCS
BLAST of CsaV3_3G024990 vs. NCBI nr
Match: KGN58075.1 (hypothetical protein Csa_3G484330 [Cucumis sativus]) HSP 1 Score: 335.5 bits (859), Expect = 1.1e-88 Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 0
BLAST of CsaV3_3G024990 vs. NCBI nr
Match: KGN51471.1 (hypothetical protein Csa_5G562290 [Cucumis sativus]) HSP 1 Score: 84.0 bits (206), Expect = 6.0e-13 Identity = 60/179 (33.52%), Postives = 103/179 (57.54%), Query Frame = 0
BLAST of CsaV3_3G024990 vs. NCBI nr
Match: XP_022157182.1 (uncharacterized protein LOC111023958 [Momordica charantia] >XP_022157183.1 uncharacterized protein LOC111023958 [Momordica charantia]) HSP 1 Score: 84.0 bits (206), Expect = 6.0e-13 Identity = 67/189 (35.45%), Postives = 107/189 (56.61%), Query Frame = 0
BLAST of CsaV3_3G024990 vs. NCBI nr
Match: XP_022157172.1 (uncharacterized protein LOC111023951 [Momordica charantia]) HSP 1 Score: 82.0 bits (201), Expect = 2.3e-12 Identity = 64/183 (34.97%), Postives = 104/183 (56.83%), Query Frame = 0
BLAST of CsaV3_3G024990 vs. NCBI nr
Match: XP_022157130.1 (uncharacterized protein LOC111023927 [Momordica charantia]) HSP 1 Score: 82.0 bits (201), Expect = 2.3e-12 Identity = 64/191 (33.51%), Postives = 99/191 (51.83%), Query Frame = 0
BLAST of CsaV3_3G024990 vs. TrEMBL
Match: tr|A0A0A0L822|A0A0A0L822_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G484330 PE=4 SV=1) HSP 1 Score: 335.5 bits (859), Expect = 7.6e-89 Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 0
BLAST of CsaV3_3G024990 vs. TrEMBL
Match: tr|A0A0A0KUT0|A0A0A0KUT0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G562290 PE=4 SV=1) HSP 1 Score: 84.0 bits (206), Expect = 4.0e-13 Identity = 60/179 (33.52%), Postives = 103/179 (57.54%), Query Frame = 0
BLAST of CsaV3_3G024990 vs. TrEMBL
Match: tr|A0A0A0KM15|A0A0A0KM15_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G139820 PE=4 SV=1) HSP 1 Score: 67.0 bits (162), Expect = 5.0e-08 Identity = 58/185 (31.35%), Postives = 96/185 (51.89%), Query Frame = 0
BLAST of CsaV3_3G024990 vs. TrEMBL
Match: tr|E5GBE1|E5GBE1_CUCME (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1) HSP 1 Score: 65.9 bits (159), Expect = 1.1e-07 Identity = 54/187 (28.88%), Postives = 97/187 (51.87%), Query Frame = 0
BLAST of CsaV3_3G024990 vs. TrEMBL
Match: tr|A0A0A0KJZ3|A0A0A0KJZ3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G139810 PE=4 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 4.2e-07 Identity = 53/187 (28.34%), Postives = 94/187 (50.27%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |