Lsi07G004980 (gene) Bottle gourd (USVL1VR-Ls)

NameLsi07G004980
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionPentatricopeptide repeat-containing protein, putative
Locationchr07 : 5251970 .. 5254600 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CCAAATTCGAGTATGCATCAACGGAACATTGAGAAGAATACTTCGCCAATTTTCCCTTCCCATCCCTTCTTCCTCATCAATCGCTGTAATTTATGTGCATTTGATTCAGTGTTTATTGATTTTCTCCAATGGCATTGTTCCAATAATGAATTTCACATCACTCGTTTCGAAGCGTTCCATATCTTCTCTCCCTTGTCTCTCTGCGAGAATAAAGCAAACAGGTTAGCTTCATTTTCATTTGGCTTCAATGGCGACACACAAAAATATGTAATATCTTCGAAAATTCCTCTGTTTCACATTCATAAATGCCCATTTTGACAAAATTACTGTTTATGTTTTACTTGTTTATGTAGAAAATGAAATTGTCCAAATGTTTCGAGTGCCCAGTCCAAGGCCCGAAGCTTCCAACTTCCCTATCAATCGGAAGGTACCGCGGAGGGATCCTTCTGTTCGGACTCTAGACGAGAGATTCATAAGAATTTTGAAAATTTTCAAGTGGGGATCTGATGCAGAGAAGGCGATTGAAGTGCTGAAGCTCAAAGTTGATCACAGGTTAGTTCGTCAAGTCTTGCAAATTGATGTAGAAATTAGGGTTAAAATTCAATTCTTCAAATGGGCTGGAAAGAGAAAGAACTTCCACCACGATTCCACTACATATATGGCTTTAATTCGATGCTTAGAGGAATCTGGACTTGTTGGTGAAATGTGGAGGACAATCCAAGACATGGTTCGTAGTCCATGTTCTGTTGGTCCAGCTGAATTGTCTGAAATTCTTAAAATCTTGGGAAAGGCAAAAATGGTGAACAAGGCATTATCTGTGTTTTATCAGATTAAAGGTCGCAAATGTAAGCCAACAGCAACCACTTACAATACCTTGATCCTGATGCTTATGCAAGAAGGTCACCATGAAAAAATCCATGAGCTCTACAATGAGATATGCAGCGAGGGTAACTGTTCCCCTGATACAATCACCTACAGTGCACTTATCTCGGCATTTGGAAAACTAGAGCGTTATGATTTCGCGTTTCAATTGTTCGATGAGATGAAGGAGAATGGTTTACAACCAACTGCAAAGATTTATACTACCATACTGGGAATGTATTTTAAGTTGAATAAGGTTGAGGCAGCTTTGGGTTTGGTTGAGGAGATGAAAGGAAAGGGCTGTGCTCCAACTGTCTTCACTTACACTGAATTAATAAAGGGGCTTGGGAAAGTTGGAAGGGTAGATGATGCCTATAGTTTGTTTTTTAGTATGTCGAAGGACGGTTGCAAGCCTGATGTTGTACTTATAAACAATTTGATCAATATATTGGGCAGGGCGGGCCGTTTGGAAGATGCTCTAAAGCTTTTTGGTAAAATGGATTCTTTGCAGTGTTTACCCAATGTGGTTACATACAACACTGTAATAAAAGCTATCTTTGAATCAAAAGCTCCAGCTTCTGAGGCTGCTTTGTGGTTTGAAAAGATGAAGGCGAACGGTGTTGCTCCCAGCTCGTTCACGTATGCAATTCTTATTGATGGTTTCTGCAAGACAAATAGAGTTGAGAAGGCTTTATTGCTTCTTGAAGAAATGGATGAAAAGGGGTTTCCTCCATGTCCAGCTGCTTACTGTAGCCTGATCAATAGTCTTGGACAGGCCAAACGATACGAAGCTGCAAATGAGCTATTTCAAGAACTAAAAGAGAATTGTGGGCGCTCTAGTGCTCGGGTATATGCTGTGATGATAAAACACTTTGGCAAGTGTGGACGTCTAAGTGATGCTGTTGATCTTTTTAATGAAATGAAAAAACTTGGATGCAAGCCTGATGTTTATACTTATAATGCACTCATGTCAGGGATGGTAAGGGCTGGAATGATCGACGAGGCTCATTCCTTGCTGAGAACAATGGGAGAAAATGGTTGCACGCCGGACTTAAACTCGCACAACATTATATTAAATGGCTTAGCTAGGACTGGTGGCCCAAAACGAGCAATTGAAATGTTTACAAAGATGAAACATTCAAAGATCATGCCAGATGCAGTTTCTTATAATACTCTACTTAGTTGTCTCAGTCGAGCTGGTATGTTTGAGGAGGCTGCAAAGTTAATGAGAGAGATGAAGTCGAAAGGATTCGAGTACAATCCCATTACTTACTCATCGATCCTCGAAGCAGTTGGTAAAGTTGATGAAGATTGCAGTCCAATTACTTCATTATAAAGATCTCATGCTAGTTTGTTTTAGGCCTATAGATTAACTTATTATTTTCAGAGTATCCCATGTTGCTTTCTTATCAGCAATTCGGTAATCGACATCAACAAACATCTTAACAGTACAAAAGCATTTCTATTTGAGTAATGCTATCACAGAGGTTATGATTTTGACATGGCTAGCAGTAAGCTAGATGAAGGTTTAATGATGTGAGAAGATTGTATTATTTGGTTCAACCATTCAAAAAGGTTCAGTGCCTTGGAGGCTTCCGACAAAGTTCGCTCTTTGACGCTAGAAATTATAGAATTATTATTATTGTTGTAATCTATGGAGTTCAAATATATGGTCTCTATCACTTCTTCTGGTGACAGTGCCTGCAAGGTCTAGGAAAGGCAGATGGTAGGACTTGGTTGAGTTGGCCGGATGGACCACCCAAATTTTGG

mRNA sequence

CCAAATTCGAGTATGCATCAACGGAACATTGAGAAGAATACTTCGCCAATTTTCCCTTCCCATCCCTTCTTCCTCATCAATCGCTGTAATTTATGTGCATTTGATTCAGTGTTTATTGATTTTCTCCAATGGCATTGTTCCAATAATGAATTTCACATCACTCGTTTCGAAGCGTTCCATATCTTCTCTCCCTTGTCTCTCTGCGAGAATAAAGCAAACAGAAAATGAAATTGTCCAAATGTTTCGAGTGCCCAGTCCAAGGCCCGAAGCTTCCAACTTCCCTATCAATCGGAAGGTACCGCGGAGGGATCCTTCTGTTCGGACTCTAGACGAGAGATTCATAAGAATTTTGAAAATTTTCAAGTGGGGATCTGATGCAGAGAAGGCGATTGAAGTGCTGAAGCTCAAAGTTGATCACAGGTTAGTTCGTCAAGTCTTGCAAATTGATGTAGAAATTAGGGTTAAAATTCAATTCTTCAAATGGGCTGGAAAGAGAAAGAACTTCCACCACGATTCCACTACATATATGGCTTTAATTCGATGCTTAGAGGAATCTGGACTTGTTGGTGAAATGTGGAGGACAATCCAAGACATGGTTCGTAGTCCATGTTCTGTTGGTCCAGCTGAATTGTCTGAAATTCTTAAAATCTTGGGAAAGGCAAAAATGGTGAACAAGGCATTATCTGTGTTTTATCAGATTAAAGGTCGCAAATGTAAGCCAACAGCAACCACTTACAATACCTTGATCCTGATGCTTATGCAAGAAGGTCACCATGAAAAAATCCATGAGCTCTACAATGAGATATGCAGCGAGGGTAACTGTTCCCCTGATACAATCACCTACAGTGCACTTATCTCGGCATTTGGAAAACTAGAGCGTTATGATTTCGCGTTTCAATTGTTCGATGAGATGAAGGAGAATGGTTTACAACCAACTGCAAAGATTTATACTACCATACTGGGAATGTATTTTAAGTTGAATAAGGTTGAGGCAGCTTTGGGTTTGGTTGAGGAGATGAAAGGAAAGGGCTGTGCTCCAACTGTCTTCACTTACACTGAATTAATAAAGGGGCTTGGGAAAGTTGGAAGGGTAGATGATGCCTATAGTTTGTTTTTTAGTATGTCGAAGGACGGTTGCAAGCCTGATGTTGTACTTATAAACAATTTGATCAATATATTGGGCAGGGCGGGCCGTTTGGAAGATGCTCTAAAGCTTTTTGGTAAAATGGATTCTTTGCAGTGTTTACCCAATGTGGTTACATACAACACTGTAATAAAAGCTATCTTTGAATCAAAAGCTCCAGCTTCTGAGGCTGCTTTGTGGTTTGAAAAGATGAAGGCGAACGGTGTTGCTCCCAGCTCGTTCACGTATGCAATTCTTATTGATGGTTTCTGCAAGACAAATAGAGTTGAGAAGGCTTTATTGCTTCTTGAAGAAATGGATGAAAAGGGGTTTCCTCCATGTCCAGCTGCTTACTGTAGCCTGATCAATAGTCTTGGACAGGCCAAACGATACGAAGCTGCAAATGAGCTATTTCAAGAACTAAAAGAGAATTGTGGGCGCTCTAGTGCTCGGGTATATGCTGTGATGATAAAACACTTTGGCAAGTGTGGACGTCTAAGTGATGCTGTTGATCTTTTTAATGAAATGAAAAAACTTGGATGCAAGCCTGATGTTTATACTTATAATGCACTCATGTCAGGGATGGTAAGGGCTGGAATGATCGACGAGGCTCATTCCTTGCTGAGAACAATGGGAGAAAATGGTTGCACGCCGGACTTAAACTCGCACAACATTATATTAAATGGCTTAGCTAGGACTGGTGGCCCAAAACGAGCAATTGAAATGTTTACAAAGATGAAACATTCAAAGATCATGCCAGATGCAGTTTCTTATAATACTCTACTTAGTTGTCTCAGTCGAGCTGGTATGTTTGAGGAGGCTGCAAAGTTAATGAGAGAGATGAAGTCGAAAGGATTCGAGTACAATCCCATTACTTACTCATCGATCCTCGAAGCAGTTGGTAAAGTTGATGAAGATTGCAGTCCAATTACTTCATTATAAAGATCTCATGCTAGTTTGTTTTAGGCCTATAGATTAACTTATTATTTTCAGAGTATCCCATGTTGCTTTCTTATCAGCAATTCGGTAATCGACATCAACAAACATCTTAACAGTACAAAAGCATTTCTATTTGAGTAATGCTATCACAGAGGTTATGATTTTGACATGGCTAGCAGTAAGCTAGATGAAGGTTTAATGATGTGAGAAGATTGTATTATTTGGTTCAACCATTCAAAAAGGTTCAGTGCCTTGGAGGCTTCCGACAAAGTTCGCTCTTTGACGCTAGAAATTATAGAATTATTATTATTGTTGTAATCTATGGAGTTCAAATATATGGTCTCTATCACTTCTTCTGGTGACAGTGCCTGCAAGGTCTAGGAAAGGCAGATGGTAGGACTTGGTTGAGTTGGCCGGATGGACCACCCAAATTTTGG

Coding sequence (CDS)

ATGAATTTCACATCACTCGTTTCGAAGCGTTCCATATCTTCTCTCCCTTGTCTCTCTGCGAGAATAAAGCAAACAGAAAATGAAATTGTCCAAATGTTTCGAGTGCCCAGTCCAAGGCCCGAAGCTTCCAACTTCCCTATCAATCGGAAGGTACCGCGGAGGGATCCTTCTGTTCGGACTCTAGACGAGAGATTCATAAGAATTTTGAAAATTTTCAAGTGGGGATCTGATGCAGAGAAGGCGATTGAAGTGCTGAAGCTCAAAGTTGATCACAGGTTAGTTCGTCAAGTCTTGCAAATTGATGTAGAAATTAGGGTTAAAATTCAATTCTTCAAATGGGCTGGAAAGAGAAAGAACTTCCACCACGATTCCACTACATATATGGCTTTAATTCGATGCTTAGAGGAATCTGGACTTGTTGGTGAAATGTGGAGGACAATCCAAGACATGGTTCGTAGTCCATGTTCTGTTGGTCCAGCTGAATTGTCTGAAATTCTTAAAATCTTGGGAAAGGCAAAAATGGTGAACAAGGCATTATCTGTGTTTTATCAGATTAAAGGTCGCAAATGTAAGCCAACAGCAACCACTTACAATACCTTGATCCTGATGCTTATGCAAGAAGGTCACCATGAAAAAATCCATGAGCTCTACAATGAGATATGCAGCGAGGGTAACTGTTCCCCTGATACAATCACCTACAGTGCACTTATCTCGGCATTTGGAAAACTAGAGCGTTATGATTTCGCGTTTCAATTGTTCGATGAGATGAAGGAGAATGGTTTACAACCAACTGCAAAGATTTATACTACCATACTGGGAATGTATTTTAAGTTGAATAAGGTTGAGGCAGCTTTGGGTTTGGTTGAGGAGATGAAAGGAAAGGGCTGTGCTCCAACTGTCTTCACTTACACTGAATTAATAAAGGGGCTTGGGAAAGTTGGAAGGGTAGATGATGCCTATAGTTTGTTTTTTAGTATGTCGAAGGACGGTTGCAAGCCTGATGTTGTACTTATAAACAATTTGATCAATATATTGGGCAGGGCGGGCCGTTTGGAAGATGCTCTAAAGCTTTTTGGTAAAATGGATTCTTTGCAGTGTTTACCCAATGTGGTTACATACAACACTGTAATAAAAGCTATCTTTGAATCAAAAGCTCCAGCTTCTGAGGCTGCTTTGTGGTTTGAAAAGATGAAGGCGAACGGTGTTGCTCCCAGCTCGTTCACGTATGCAATTCTTATTGATGGTTTCTGCAAGACAAATAGAGTTGAGAAGGCTTTATTGCTTCTTGAAGAAATGGATGAAAAGGGGTTTCCTCCATGTCCAGCTGCTTACTGTAGCCTGATCAATAGTCTTGGACAGGCCAAACGATACGAAGCTGCAAATGAGCTATTTCAAGAACTAAAAGAGAATTGTGGGCGCTCTAGTGCTCGGGTATATGCTGTGATGATAAAACACTTTGGCAAGTGTGGACGTCTAAGTGATGCTGTTGATCTTTTTAATGAAATGAAAAAACTTGGATGCAAGCCTGATGTTTATACTTATAATGCACTCATGTCAGGGATGGTAAGGGCTGGAATGATCGACGAGGCTCATTCCTTGCTGAGAACAATGGGAGAAAATGGTTGCACGCCGGACTTAAACTCGCACAACATTATATTAAATGGCTTAGCTAGGACTGGTGGCCCAAAACGAGCAATTGAAATGTTTACAAAGATGAAACATTCAAAGATCATGCCAGATGCAGTTTCTTATAATACTCTACTTAGTTGTCTCAGTCGAGCTGGTATGTTTGAGGAGGCTGCAAAGTTAATGAGAGAGATGAAGTCGAAAGGATTCGAGTACAATCCCATTACTTACTCATCGATCCTCGAAGCAGTTGGTAAAGTTGATGAAGATTGCAGTCCAATTACTTCATTATAA

Protein sequence

MNFTSLVSKRSISSLPCLSARIKQTENEIVQMFRVPSPRPEASNFPINRKVPRRDPSVRTLDERFIRILKIFKWGSDAEKAIEVLKLKVDHRLVRQVLQIDVEIRVKIQFFKWAGKRKNFHHDSTTYMALIRCLEESGLVGEMWRTIQDMVRSPCSVGPAELSEILKILGKAKMVNKALSVFYQIKGRKCKPTATTYNTLILMLMQEGHHEKIHELYNEICSEGNCSPDTITYSALISAFGKLERYDFAFQLFDEMKENGLQPTAKIYTTILGMYFKLNKVEAALGLVEEMKGKGCAPTVFTYTELIKGLGKVGRVDDAYSLFFSMSKDGCKPDVVLINNLINILGRAGRLEDALKLFGKMDSLQCLPNVVTYNTVIKAIFESKAPASEAALWFEKMKANGVAPSSFTYAILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINSLGQAKRYEAANELFQELKENCGRSSARVYAVMIKHFGKCGRLSDAVDLFNEMKKLGCKPDVYTYNALMSGMVRAGMIDEAHSLLRTMGENGCTPDLNSHNIILNGLARTGGPKRAIEMFTKMKHSKIMPDAVSYNTLLSCLSRAGMFEEAAKLMREMKSKGFEYNPITYSSILEAVGKVDEDCSPITSL
BLAST of Lsi07G004980 vs. Swiss-Prot
Match: PP236_ARATH (Pentatricopeptide repeat-containing protein At3g16010 OS=Arabidopsis thaliana GN=At3g16010 PE=2 SV=1)

HSP 1 Score: 917.1 bits (2369), Expect = 1.0e-265
Identity = 454/633 (71.72%), Postives = 533/633 (84.20%), Query Frame = 1

Query: 8   SKRSISSLPCLSARIKQTENEIVQMFRVPSPRPEASNFPINR-KVPRRDPSVRTLDERFI 67
           +KRSISSLP LS R KQTENEIVQMF VP+   E S  P  + K+ R+DPSVR LDERFI
Sbjct: 11  AKRSISSLPHLSQRFKQTENEIVQMFSVPNH--EESEKPQEKWKLSRKDPSVRMLDERFI 70

Query: 68  RILKIFKWGSDAEKAIEVLKLKVDHRLVRQVLQIDVEIRVKIQFFKWAGKRKNFHHDSTT 127
           RI+KIFKWG DAEKA+EVLKLKVDHRLVR +L+IDVEI VKIQFFKWAGKR+NF HD +T
Sbjct: 71  RIVKIFKWGPDAEKALEVLKLKVDHRLVRSILEIDVEINVKIQFFKWAGKRRNFQHDCST 130

Query: 128 YMALIRCLEESGLVGEMWRTIQDMVRSP-CSVGPAELSEILKILGKAKMVNKALSVFYQI 187
           YM LIRCLEE+ L GEM+RTIQ++VR+   SV PA LSE++K LG+AKMV+KALSVFYQ 
Sbjct: 131 YMTLIRCLEEARLYGEMYRTIQEVVRNTYVSVSPAVLSELVKALGRAKMVSKALSVFYQA 190

Query: 188 KGRKCKPTATTYNTLILMLMQEGHHEKIHELYNEICSEGNCSPDTITYSALISAFGKLER 247
           KGRKCKPT++TYN++ILMLMQEG HEK+HE+Y E+C+EG+C PDTITYSALIS++ KL R
Sbjct: 191 KGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGR 250

Query: 248 YDFAFQLFDEMKENGLQPTAKIYTTILGMYFKLNKVEAALGLVEEMKGKGCAPTVFTYTE 307
            D A +LFDEMK+N +QPT KIYTT+LG+YFK+ KVE AL L EEMK  GC+PTV+TYTE
Sbjct: 251 NDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTE 310

Query: 308 LIKGLGKVGRVDDAYSLFFSMSKDGCKPDVVLINNLINILGRAGRLEDALKLFGKMDSLQ 367
           LIKGLGK GRVD+AY  +  M +DG  PDVV +NNL+NILG+ GR+E+   +F +M   +
Sbjct: 311 LIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWR 370

Query: 368 CLPNVVTYNTVIKAIFESKAPASEAALWFEKMKANGVAPSSFTYAILIDGFCKTNRVEKA 427
           C P VV+YNTVIKA+FESKA  SE + WF+KMKA+ V+PS FTY+ILIDG+CKTNRVEKA
Sbjct: 371 CTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKA 430

Query: 428 LLLLEEMDEKGFPPCPAAYCSLINSLGQAKRYEAANELFQELKENCGRSSARVYAVMIKH 487
           LLLLEEMDEKGFPPCPAAYCSLIN+LG+AKRYEAANELF+ELKEN G  S+RVYAVMIKH
Sbjct: 431 LLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKH 490

Query: 488 FGKCGRLSDAVDLFNEMKKLGCKPDVYTYNALMSGMVRAGMIDEAHSLLRTMGENGCTPD 547
           FGKCG+LS+AVDLFNEMK  G  PDVY YNALMSGMV+AGMI+EA+SLLR M ENGC  D
Sbjct: 491 FGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRAD 550

Query: 548 LNSHNIILNGLARTGGPKRAIEMFTKMKHSKIMPDAVSYNTLLSCLSRAGMFEEAAKLMR 607
           +NSHNIILNG ARTG P+RAIEMF  +KHS I PD V+YNTLL C + AGMFEEAA++MR
Sbjct: 551 INSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMR 610

Query: 608 EMKSKGFEYNPITYSSILEAVGKVDEDCSPITS 639
           EMK KGFEY+ ITYSSIL+AVG VD +   ++S
Sbjct: 611 EMKDKGFEYDAITYSSILDAVGNVDHEKDDVSS 641

BLAST of Lsi07G004980 vs. Swiss-Prot
Match: PP217_ARATH (Pentatricopeptide repeat-containing protein At3g06920 OS=Arabidopsis thaliana GN=At3g06920 PE=2 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 6.4e-66
Identity = 136/466 (29.18%), Postives = 250/466 (53.65%), Query Frame = 1

Query: 168 ILGKAKMVNKA---LSVFYQIKGRKCKPTATTYNTLILMLMQEGHHEKIHELYNEICSEG 227
           ++G    VN +   L++F Q++    +PT   + TLI    +EG  +    L +E+ S  
Sbjct: 174 LIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSS- 233

Query: 228 NCSPDTITYSALISAFGKLERYDFAFQLFDEMKENGLQPTAKIYTTILGMYFKLNKVEAA 287
           +   D + Y+  I +FGK+ + D A++ F E++ NGL+P    YT+++G+  K N+++ A
Sbjct: 234 SLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEA 293

Query: 288 LGLVEEMKGKGCAPTVFTYTELIKGLGKVGRVDDAYSLFFSMSKDGCKPDVVLINNLINI 347
           + + E ++     P  + Y  +I G G  G+ D+AYSL       G  P V+  N ++  
Sbjct: 294 VEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTC 353

Query: 348 LGRAGRLEDALKLFGKMDSLQCLPNVVTYNTVIKAIFESKAPASEAALWFEKMKANGVAP 407
           L + G++++ALK+F +M      PN+ TYN +I  +  +      A    + M+  G+ P
Sbjct: 354 LRKMGKVDEALKVFEEMKK-DAAPNLSTYNILIDMLCRA-GKLDTAFELRDSMQKAGLFP 413

Query: 408 SSFTYAILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINSLGQAKRYEAANELF 467
           +  T  I++D  CK+ ++++A  + EEMD K   P    +CSLI+ LG+  R + A +++
Sbjct: 414 NVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVY 473

Query: 468 QELKENCGRSSARVYAVMIKHFGKCGRLSDAVDLFNEMKKLGCKPDVYTYNALMSGMVRA 527
           +++ ++  R+++ VY  +IK+F   GR  D   ++ +M    C PD+   N  M  M +A
Sbjct: 474 EKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKA 533

Query: 528 GMIDEAHSLLRTMGENGCTPDLNSHNIILNGLARTGGPKRAIEMFTKMKHSKIMPDAVSY 587
           G  ++  ++   +      PD  S++I+++GL + G      E+F  MK    + D  +Y
Sbjct: 534 GEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAY 593

Query: 588 NTLLSCLSRAGMFEEAAKLMREMKSKGFEYNPITYSSILEAVGKVD 631
           N ++    + G   +A +L+ EMK+KGFE   +TY S+++ + K+D
Sbjct: 594 NIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKID 636

BLAST of Lsi07G004980 vs. Swiss-Prot
Match: PPR91_ARATH (Pentatricopeptide repeat-containing protein At1g62670, mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=3 SV=2)

HSP 1 Score: 244.2 bits (622), Expect = 3.9e-63
Identity = 152/512 (29.69%), Postives = 254/512 (49.61%), Query Frame = 1

Query: 122 HDSTTYMALIRCLEESGLVGEMWRTIQDMVRSPCSVGPAELSEILKILGKAKMVNKALSV 181
           H+  TY  LI C      +      +  M++         LS +L     +K +++A+++
Sbjct: 114 HNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVAL 173

Query: 182 FYQIKGRKCKPTATTYNTLILMLMQEGHHEKIHELYNEICSEGNCSPDTITYSALISAFG 241
             Q+     +P   T+NTLI  L       +   L + + ++G C PD +TY  +++   
Sbjct: 174 VDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKG-CQPDLVTYGVVVNGLC 233

Query: 242 KLERYDFAFQLFDEMKENGLQPTAKIYTTILGMYFKLNKVEAALGLVEEMKGKGCAPTVF 301
           K    D AF L ++M++  L+P   IY TI+    K   ++ AL L +EM+ KG  P V 
Sbjct: 234 KRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVV 293

Query: 302 TYTELIKGLGKVGRVDDAYSLFFSMSKDGCKPDVVLINNLINILGRAGRLEDALKLFGKM 361
           TY+ LI  L   GR  DA  L   M +    PDV   + LI+   + G+L +A KL+ +M
Sbjct: 294 TYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEM 353

Query: 362 DSLQCLPNVVTYNTVIKAIFESKAPASEAALWFEKMKANGVAPSSFTYAILIDGFCKTNR 421
                 P++VTY+++I   F       EA   FE M +    P   TY  LI GFCK  R
Sbjct: 354 VKRSIDPSIVTYSSLING-FCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKR 413

Query: 422 VEKALLLLEEMDEKGFPPCPAAYCSLINSLGQAKRYEAANELFQELKENCGRSSARVYAV 481
           VE+ + +  EM ++G       Y  LI  L QA   + A E+F+E+  +    +   Y  
Sbjct: 414 VEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNT 473

Query: 482 MIKHFGKCGRLSDAVDLFNEMKKLGCKPDVYTYNALMSGMVRAGMIDEAHSLLRTMGENG 541
           ++    K G+L  A+ +F  +++   +P +YTYN ++ GM +AG +++   L   +   G
Sbjct: 474 LLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKG 533

Query: 542 CTPDLNSHNIILNGLARTGGPKRAIEMFTKMKHSKIMPDAVSYNTLLSCLSRAGMFEEAA 601
             PD+ ++N +++G  R G  + A  +F +MK    +P++  YNTL+    R G  E +A
Sbjct: 534 VKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASA 593

Query: 602 KLMREMKSKGFEYNPITYSSILEAV--GKVDE 632
           +L++EM+S GF  +  T   +   +  G++D+
Sbjct: 594 ELIKEMRSCGFAGDASTIGLVTNMLHDGRLDK 623

BLAST of Lsi07G004980 vs. Swiss-Prot
Match: PPR98_ARATH (Pentatricopeptide repeat-containing protein At1g63080, mitochondrial OS=Arabidopsis thaliana GN=At1g63080 PE=2 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 6.6e-63
Identity = 149/512 (29.10%), Postives = 251/512 (49.02%), Query Frame = 1

Query: 122 HDSTTYMALIRCLEESGLVGEMWRTIQDMVRSPCSVGPAELSEILKILGKAKMVNKALSV 181
           H+  TY  +I CL     +      +  M++         L+ +L        +++A+++
Sbjct: 98  HNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVAL 157

Query: 182 FYQIKGRKCKPTATTYNTLILMLMQEGHHEKIHELYNEICSEGNCSPDTITYSALISAFG 241
             Q+     +P   T+ TL+  L Q     +   L   +  +G C PD +TY A+I+   
Sbjct: 158 VDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKG-CQPDLVTYGAVINGLC 217

Query: 242 KLERYDFAFQLFDEMKENGLQPTAKIYTTILGMYFKLNKVEAALGLVEEMKGKGCAPTVF 301
           K    D A  L ++M++  ++    IY+T++    K   V+ AL L  EM  KG  P VF
Sbjct: 218 KRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVF 277

Query: 302 TYTELIKGLGKVGRVDDAYSLFFSMSKDGCKPDVVLINNLINILGRAGRLEDALKLFGKM 361
           TY+ LI  L   GR  DA  L   M +    P+VV  N+LI+   + G+L +A KLF +M
Sbjct: 278 TYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEM 337

Query: 362 DSLQCLPNVVTYNTVIKAIFESKAPASEAALWFEKMKANGVAPSSFTYAILIDGFCKTNR 421
                 PN+VTYN++I   F       EA   F  M +    P   TY  LI+GFCK  +
Sbjct: 338 IQRSIDPNIVTYNSLING-FCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKK 397

Query: 422 VEKALLLLEEMDEKGFPPCPAAYCSLINSLGQAKRYEAANELFQELKENCGRSSARVYAV 481
           V   + L  +M  +G       Y +LI+   QA   + A  +F+++  +    +   Y  
Sbjct: 398 VVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNT 457

Query: 482 MIKHFGKCGRLSDAVDLFNEMKKLGCKPDVYTYNALMSGMVRAGMIDEAHSLLRTMGENG 541
           ++    K G+L  A+ +F  ++K   +PD+YTYN +  GM +AG +++   L  ++   G
Sbjct: 458 LLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKG 517

Query: 542 CTPDLNSHNIILNGLARTGGPKRAIEMFTKMKHSKIMPDAVSYNTLLSCLSRAGMFEEAA 601
             PD+ ++N +++G  + G  + A  +F KMK    +PD+ +YNTL+    R G    +A
Sbjct: 518 VKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASA 577

Query: 602 KLMREMKSKGFEYNPITYSSILEAV--GKVDE 632
           +L++EM+S  F  +  TY  + + +  G++D+
Sbjct: 578 ELIKEMRSCRFAGDASTYGLVTDMLHDGRLDK 607

BLAST of Lsi07G004980 vs. Swiss-Prot
Match: PPR94_ARATH (Pentatricopeptide repeat-containing protein At1g62910 OS=Arabidopsis thaliana GN=At1g62910 PE=2 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 2.1e-61
Identity = 147/512 (28.71%), Postives = 252/512 (49.22%), Query Frame = 1

Query: 122 HDSTTYMALIRCLEESGLVGEMWRTIQDMVRSPCSVGPAELSEILKILGKAKMVNKALSV 181
           HD  TY   I C      +      +  M++         LS +L     +K ++ A+++
Sbjct: 116 HDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVAL 175

Query: 182 FYQIKGRKCKPTATTYNTLILMLMQEGHHEKIHELYNEICSEGNCSPDTITYSALISAFG 241
             Q+     KP   T+ TLI  L       +   L +++   G C PD +TY  +++   
Sbjct: 176 VDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRG-CQPDLVTYGTVVNGLC 235

Query: 242 KLERYDFAFQLFDEMKENGLQPTAKIYTTILGMYFKLNKVEAALGLVEEMKGKGCAPTVF 301
           K    D A  L  +M++  ++    IY TI+    K   ++ AL L  EM  KG  P VF
Sbjct: 236 KRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVF 295

Query: 302 TYTELIKGLGKVGRVDDAYSLFFSMSKDGCKPDVVLINNLINILGRAGRLEDALKLFGKM 361
           TY+ LI  L   GR  DA  L   M +    P+VV  + LI+   + G+L +A KL+ +M
Sbjct: 296 TYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM 355

Query: 362 DSLQCLPNVVTYNTVIKAIFESKAPASEAALWFEKMKANGVAPSSFTYAILIDGFCKTNR 421
                 P++ TY+++I   F       EA   FE M +    P+  TY+ LI GFCK  R
Sbjct: 356 IKRSIDPDIFTYSSLING-FCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKR 415

Query: 422 VEKALLLLEEMDEKGFPPCPAAYCSLINSLGQAKRYEAANELFQELKENCGRSSARVYAV 481
           VE+ + L  EM ++G       Y +LI+   QA+  + A  +F+++       +   Y +
Sbjct: 416 VEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNI 475

Query: 482 MIKHFGKCGRLSDAVDLFNEMKKLGCKPDVYTYNALMSGMVRAGMIDEAHSLLRTMGENG 541
           ++    K G+L+ A+ +F  +++   +PD+YTYN ++ GM +AG +++   L   +   G
Sbjct: 476 LLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKG 535

Query: 542 CTPDLNSHNIILNGLARTGGPKRAIEMFTKMKHSKIMPDAVSYNTLLSCLSRAGMFEEAA 601
            +P++ ++N +++G  R G  + A  +  KMK    +P++ +YNTL+    R G  E +A
Sbjct: 536 VSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASA 595

Query: 602 KLMREMKSKGFEYNPITYSSILEAV--GKVDE 632
           +L++EM+S GF  +  T   +   +  G++D+
Sbjct: 596 ELIKEMRSCGFAGDASTIGLVTNMLHDGRLDK 625

BLAST of Lsi07G004980 vs. TrEMBL
Match: D7U0L2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_09s0002g04690 PE=4 SV=1)

HSP 1 Score: 1053.5 bits (2723), Expect = 1.0e-304
Identity = 510/631 (80.82%), Postives = 574/631 (90.97%), Query Frame = 1

Query: 5   SLVSKRSISSLPCLSARIKQTENEIVQMFRVPSPRPEASNFPINRKVPRRDPSVRTLDER 64
           S+  +R IS+LP LS RIKQTE+EIVQMF++ SP+ E    P+N+K PR +PSVRTLDER
Sbjct: 5   SIPLRRMISTLPHLSQRIKQTESEIVQMFKLSSPKDEIQRLPMNQKFPRNNPSVRTLDER 64

Query: 65  FIRILKIFKWGSDAEKAIEVLKLKVDHRLVRQVLQIDVEIRVKIQFFKWAGKRKNFHHDS 124
           FIRILKIFKWG DAEKA+EVLKLKVDHRLVR+VL+IDVEI VKIQFFKWAGKR+NF HDS
Sbjct: 65  FIRILKIFKWGPDAEKALEVLKLKVDHRLVREVLKIDVEIHVKIQFFKWAGKRRNFEHDS 124

Query: 125 TTYMALIRCLEESGLVGEMWRTIQDMVRSPCSVGPAELSEILKILGKAKMVNKALSVFYQ 184
           TTYMALI CL+E+G++GEMW+TIQ+MVRS C +GPA+LSEI+K+LGKAKMVNKALS+FYQ
Sbjct: 125 TTYMALIHCLDEAGMLGEMWKTIQEMVRSTCVIGPADLSEIVKVLGKAKMVNKALSIFYQ 184

Query: 185 IKGRKCKPTATTYNTLILMLMQEGHHEKIHELYNEICSEGNCSPDTITYSALISAFGKLE 244
           IKGRKCKPT+ TYN++ILMLMQEGHHEK+HELYNE+C+EG+C PDT+TYSALI+AFGKL 
Sbjct: 185 IKGRKCKPTSNTYNSMILMLMQEGHHEKVHELYNEMCNEGDCLPDTVTYSALIAAFGKLG 244

Query: 245 RYDFAFQLFDEMKENGLQPTAKIYTTILGMYFKLNKVEAALGLVEEMKGKGCAPTVFTYT 304
           R D A  LFDEMKENGL PTAKIYTTILG+YFKL +VE ALGLV+EMK KGCA TV+TYT
Sbjct: 245 RDDSAISLFDEMKENGLHPTAKIYTTILGIYFKLGRVEKALGLVQEMKEKGCALTVYTYT 304

Query: 305 ELIKGLGKVGRVDDAYSLFFSMSKDGCKPDVVLINNLINILGRAGRLEDALKLFGKMDSL 364
           ELIKG+GK G+V++AYS+F +M K+GCKPDVVLINNLIN+LG+AGRL DA+KLF +M+SL
Sbjct: 305 ELIKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLINNLINLLGKAGRLADAIKLFEEMESL 364

Query: 365 QCLPNVVTYNTVIKAIFESKAPASEAALWFEKMKANGVAPSSFTYAILIDGFCKTNRVEK 424
           QC PNVVTYNTVIKA+FESKA ASEA LW+EKMK NGV PSSFTY+ILIDGFCKTNRVEK
Sbjct: 365 QCTPNVVTYNTVIKALFESKARASEAFLWYEKMKENGVVPSSFTYSILIDGFCKTNRVEK 424

Query: 425 ALLLLEEMDEKGFPPCPAAYCSLINSLGQAKRYEAANELFQELKENCGRSSARVYAVMIK 484
           ALLLLEEMDEKGF PCPAAYCSLIN+LG+AKRYEAANELFQEL+ENCG SSARVYAVMIK
Sbjct: 425 ALLLLEEMDEKGFAPCPAAYCSLINALGKAKRYEAANELFQELRENCGYSSARVYAVMIK 484

Query: 485 HFGKCGRLSDAVDLFNEMKKLGCKPDVYTYNALMSGMVRAGMIDEAHSLLRTMGENGCTP 544
           H GKCGRLS+AVDLFNEMKKLGC PDVY YNALMSGMVR GM DEAHSLLRTM ENGCTP
Sbjct: 485 HLGKCGRLSEAVDLFNEMKKLGCNPDVYAYNALMSGMVRVGMTDEAHSLLRTMEENGCTP 544

Query: 545 DLNSHNIILNGLARTGGPKRAIEMFTKMKHSKIMPDAVSYNTLLSCLSRAGMFEEAAKLM 604
           DLNSHNIILNG ARTGGPK AIEMFT+MK+SKI PD VSYNT+L CLSRAGMFEEAAKLM
Sbjct: 545 DLNSHNIILNGFARTGGPKGAIEMFTRMKNSKIKPDVVSYNTVLGCLSRAGMFEEAAKLM 604

Query: 605 REMKSKGFEYNPITYSSILEAVGKVDEDCSP 636
           +EM SKGFEY+ ITYSSILEAVGK+DED +P
Sbjct: 605 KEMNSKGFEYDLITYSSILEAVGKIDEDHTP 635

BLAST of Lsi07G004980 vs. TrEMBL
Match: A0A067KZG9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06260 PE=4 SV=1)

HSP 1 Score: 1044.3 bits (2699), Expect = 6.2e-302
Identity = 511/632 (80.85%), Postives = 563/632 (89.08%), Query Frame = 1

Query: 1   MNFTSLVSKRSISSLPCLSARIKQTENEIVQMFRVPSPRPEASNFPINRKVPRRDPSVRT 60
           M F  + SKRSIS+LP L  RIKQTENEIVQMFR+PS   E  N P+NRK  R DPS+R 
Sbjct: 4   MVFGFIASKRSISTLPHLCERIKQTENEIVQMFRLPSRNDEMQNLPMNRKFSRNDPSIRK 63

Query: 61  LDERFIRILKIFKWGSDAEKAIEVLKLKVDHRLVRQVLQIDVEIRVKIQFFKWAGKRKNF 120
           LDERFIRILKIFKWG DAEKA+EVLKLKVDHRLVR+VL+IDVE+ VKI+FFKW  KR+NF
Sbjct: 64  LDERFIRILKIFKWGPDAEKALEVLKLKVDHRLVREVLKIDVEVHVKIKFFKWVAKRRNF 123

Query: 121 HHDSTTYMALIRCLEESGLVGEMWRTIQDMVRSPCSVGPAELSEILKILGKAKMVNKALS 180
            HDSTTY ALI CL+E+GL GEMW+ IQDMVRS C + PA+LSEI+KILGK+KMVNKALS
Sbjct: 124 EHDSTTYFALINCLDEAGLYGEMWKIIQDMVRSTCIISPADLSEIVKILGKSKMVNKALS 183

Query: 181 VFYQIKGRKCKPTATTYNTLILMLMQEGHHEKIHELYNEICSEGNCSPDTITYSALISAF 240
           VFYQIKGRKCKPTA TYN++IL+LMQE H+EK+HELYNE+C+EGNC PDT+TYS+LISAF
Sbjct: 184 VFYQIKGRKCKPTANTYNSMILILMQESHYEKVHELYNEMCNEGNCFPDTLTYSSLISAF 243

Query: 241 GKLERYDFAFQLFDEMKENGLQPTAKIYTTILGMYFKLNKVEAALGLVEEMKGKGCAPTV 300
           GKL+R D A +LFDEMKENGL PT KIYTT+LG+YFKL+KVE AL L+ EMK KGC PTV
Sbjct: 244 GKLDRDDSAIRLFDEMKENGLHPTPKIYTTLLGIYFKLDKVEKALDLIREMKVKGCTPTV 303

Query: 301 FTYTELIKGLGKVGRVDDAYSLFFSMSKDGCKPDVVLINNLINILGRAGRLEDALKLFGK 360
           FTYTE IKGLGK GRVDDAYS+F  M KDGC PD+VL+N LINILG+A R EDAL+LFG+
Sbjct: 304 FTYTEWIKGLGKAGRVDDAYSVFLDMIKDGCAPDIVLMNTLINILGKAHRFEDALRLFGQ 363

Query: 361 MDSLQCLPNVVTYNTVIKAIFESKAPASEAALWFEKMKANGVAPSSFTYAILIDGFCKTN 420
           M++ QC PNVVTYNTVIKA+FE KAPASEAA WFEKMKANGVAPSSFTY+ILIDGFCKTN
Sbjct: 364 MEAWQCKPNVVTYNTVIKALFECKAPASEAASWFEKMKANGVAPSSFTYSILIDGFCKTN 423

Query: 421 RVEKALLLLEEMDEKGFPPCPAAYCSLINSLGQAKRYEAANELFQELKENCGRSSARVYA 480
           RVEKALLLLEEMDEKGFPP PAAYCSLINSLG+AKRYEAANELF ELKENCG +SARVYA
Sbjct: 424 RVEKALLLLEEMDEKGFPPSPAAYCSLINSLGKAKRYEAANELFLELKENCGCTSARVYA 483

Query: 481 VMIKHFGKCGRLSDAVDLFNEMKKLGCKPDVYTYNALMSGMVRAGMIDEAHSLLRTMGEN 540
           VMIK FGKCGRLSDA+DLFNEMKKLGCKPDVYTYNALMSGMVRAGMIDEAHSLLRTM EN
Sbjct: 484 VMIKQFGKCGRLSDAIDLFNEMKKLGCKPDVYTYNALMSGMVRAGMIDEAHSLLRTMEEN 543

Query: 541 GCTPDLNSHNIILNGLARTGGPKRAIEMFTKMKHSKIMPDAVSYNTLLSCLSRAGMFEEA 600
           GC PD+NSHNIILNGLARTG P RAIEMFTKMKHS I PDAVSYNT+L CLSRAGMFEEA
Sbjct: 544 GCFPDINSHNIILNGLARTGVPNRAIEMFTKMKHSLIKPDAVSYNTVLGCLSRAGMFEEA 603

Query: 601 AKLMREMKSKGFEYNPITYSSILEAVGKVDED 633
           A+LM+EM + GFEY+ ITYSSILEAVGKVDED
Sbjct: 604 ARLMKEMNTNGFEYDQITYSSILEAVGKVDED 635

BLAST of Lsi07G004980 vs. TrEMBL
Match: A0A061GBG9_THECC (Pentatricopeptide repeat (PPR-like) superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_028690 PE=4 SV=1)

HSP 1 Score: 1036.6 bits (2679), Expect = 1.3e-299
Identity = 505/626 (80.67%), Postives = 567/626 (90.58%), Query Frame = 1

Query: 9   KRSISSLPCLSARIKQTENEIVQMFRVPSPRPEASNFPINRKVPRRDPSVRTLDERFIRI 68
           +RSIS+L  L   IKQTENEIVQMF++PSP+ EA +  + RK     PSVRTLDERFIRI
Sbjct: 11  RRSISTLSHLCEPIKQTENEIVQMFQLPSPKKEAQDLAVKRK----KPSVRTLDERFIRI 70

Query: 69  LKIFKWGSDAEKAIEVLKLKVDHRLVRQVLQIDVEIRVKIQFFKWAGKRKNFHHDSTTYM 128
           LKIFKWGSDAEKA+EVLKLKVD RLVR+VL IDVEI VKIQFFKWAGKR+NF HDSTTYM
Sbjct: 71  LKIFKWGSDAEKALEVLKLKVDQRLVREVLMIDVEINVKIQFFKWAGKRRNFEHDSTTYM 130

Query: 129 ALIRCLEESGLVGEMWRTIQDMVRSPCSVGPAELSEILKILGKAKMVNKALSVFYQIKGR 188
            LI CL+E+GLVGEMW+TIQ+M+RS C++GPAELSEI++ILGKAKMVNKALS+FYQIK R
Sbjct: 131 TLIHCLDEAGLVGEMWKTIQEMLRSTCAIGPAELSEIVRILGKAKMVNKALSIFYQIKCR 190

Query: 189 KCKPTATTYNTLILMLMQEGHHEKIHELYNEICSEGNCSPDTITYSALISAFGKLERYDF 248
           KCKPT++TYN +ILMLMQEGHHEK+HELYNE+C+EGNC PDT+TYSALIS F KL R+D 
Sbjct: 191 KCKPTSSTYNNIILMLMQEGHHEKVHELYNEMCNEGNCLPDTVTYSALISTFSKLGRHDS 250

Query: 249 AFQLFDEMKENGLQPTAKIYTTILGMYFKLNKVEAALGLVEEMKGKGCAPTVFTYTELIK 308
           A +LF+EMKENGLQPT+KIYTT++ +YFKL +   ALGLV+EMKGKGC PTVFTYTELIK
Sbjct: 251 AIRLFEEMKENGLQPTSKIYTTLIKIYFKLGETWKALGLVQEMKGKGCKPTVFTYTELIK 310

Query: 309 GLGKVGRVDDAYSLFFSMSKDGCKPDVVLINNLINILGRAGRLEDALKLFGKMDSLQCLP 368
           GLGK GRV DAY +F +M K+G KPDVVLINN+INILG+AGRLEDA KLF KM S QC+P
Sbjct: 311 GLGKAGRVQDAYGIFMNMLKEGGKPDVVLINNMINILGKAGRLEDAFKLFNKMKSWQCIP 370

Query: 369 NVVTYNTVIKAIFESKAPASEAALWFEKMKANGVAPSSFTYAILIDGFCKTNRVEKALLL 428
           NVVTYNTVIKA+F+SKAP+SEA+LWFEKMKA+GV PSSFTY+ILIDGFCKTN+VEKALLL
Sbjct: 371 NVVTYNTVIKALFDSKAPSSEASLWFEKMKADGVVPSSFTYSILIDGFCKTNKVEKALLL 430

Query: 429 LEEMDEKGFPPCPAAYCSLINSLGQAKRYEAANELFQELKENCGRSSARVYAVMIKHFGK 488
           LEEMDE+GFPPCPAAYCSLINSLG+AKRYEAANELFQELKENCG SSARVYAVMIKHFGK
Sbjct: 431 LEEMDERGFPPCPAAYCSLINSLGKAKRYEAANELFQELKENCGCSSARVYAVMIKHFGK 490

Query: 489 CGRLSDAVDLFNEMKKLGCKPDVYTYNALMSGMVRAGMIDEAHSLLRTMGENGCTPDLNS 548
           CGRLSDAVDLFNEMKKLGC PDVY YNALMSGMVRAGMI+EAHSLLRTM ENGC PDLNS
Sbjct: 491 CGRLSDAVDLFNEMKKLGCNPDVYAYNALMSGMVRAGMINEAHSLLRTMEENGCAPDLNS 550

Query: 549 HNIILNGLARTGGPKRAIEMFTKMKHSKIMPDAVSYNTLLSCLSRAGMFEEAAKLMREMK 608
           HNIILNGLARTGGP+RA+EMF KM++S I PDAVSYNT+L CLSRAGM EEAAKLM+EMK
Sbjct: 551 HNIILNGLARTGGPRRAMEMFMKMENSNIKPDAVSYNTVLGCLSRAGMLEEAAKLMKEMK 610

Query: 609 SKGFEYNPITYSSILEAVGKVDEDCS 635
           ++GFEY+ ITYSSILEAVGK+DED S
Sbjct: 611 ARGFEYDLITYSSILEAVGKIDEDRS 632

BLAST of Lsi07G004980 vs. TrEMBL
Match: A0A067DF35_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g006614mg PE=4 SV=1)

HSP 1 Score: 1028.1 bits (2657), Expect = 4.6e-297
Identity = 498/631 (78.92%), Postives = 567/631 (89.86%), Query Frame = 1

Query: 5   SLVSKRSISSLPCLSARIKQTENEIVQMFRVPSPRPEASNFPINRKVPRRDPSVRTLDER 64
           S+ SKR IS+L CL  RIKQTENEIV MF++  P  E  NFP+++K  R+D S R LDER
Sbjct: 6   SIASKRCISTLSCLCQRIKQTENEIVHMFQLSGPIDEMRNFPVSKKFARKDTSARKLDER 65

Query: 65  FIRILKIFKWGSDAEKAIEVLKLKVDHRLVRQVLQIDVEIRVKIQFFKWAGKRKNFHHDS 124
           FIRILKIFKWG DAEKA+EVLK++VDHRLV QVL IDVEI VKIQFFKWAG+R+NF H+S
Sbjct: 66  FIRILKIFKWGPDAEKALEVLKMRVDHRLVHQVLNIDVEINVKIQFFKWAGRRRNFEHNS 125

Query: 125 TTYMALIRCLEESGLVGEMWRTIQDMVRSPCSVGPAELSEILKILGKAKMVNKALSVFYQ 184
           TTYMALIRCL+E+ ++G MW++IQDMVRS C +GP+ LSEI+ ILGKAKMVNKALS+FYQ
Sbjct: 126 TTYMALIRCLDETRMIGVMWKSIQDMVRSTCVMGPSVLSEIVNILGKAKMVNKALSIFYQ 185

Query: 185 IKGRKCKPTATTYNTLILMLMQEGHHEKIHELYNEICSEGNCSPDTITYSALISAFGKLE 244
           IK RKCKPTA TYN++ILMLMQEG++EKIHELYNE+C+EGNC PDT+TYSALISAFGKL 
Sbjct: 186 IKSRKCKPTANTYNSMILMLMQEGYYEKIHELYNEMCNEGNCFPDTVTYSALISAFGKLG 245

Query: 245 RYDFAFQLFDEMKENGLQPTAKIYTTILGMYFKLNKVEAALGLVEEMKGKGCAPTVFTYT 304
           R   A +LFDEMKENGLQPTAKIYTT++ +YFKL +VE ALGLV+EMKGKGCA TV+TYT
Sbjct: 246 RDISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKALGLVQEMKGKGCALTVYTYT 305

Query: 305 ELIKGLGKVGRVDDAYSLFFSMSKDGCKPDVVLINNLINILGRAGRLEDALKLFGKMDSL 364
           ELIKGLG+ GRV+DAY LF +M K+GCKPD+VLINNLIN+LGRAGRLEDALKLF KM++L
Sbjct: 306 ELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLINVLGRAGRLEDALKLFNKMEAL 365

Query: 365 QCLPNVVTYNTVIKAIFESKAPASEAALWFEKMKANGVAPSSFTYAILIDGFCKTNRVEK 424
           QC PNVVTYNTVIK++FESKAPASEA+ WFEKMKANGV PS FTY+ILIDGFCKTNRVEK
Sbjct: 366 QCKPNVVTYNTVIKSLFESKAPASEASAWFEKMKANGVLPSPFTYSILIDGFCKTNRVEK 425

Query: 425 ALLLLEEMDEKGFPPCPAAYCSLINSLGQAKRYEAANELFQELKENCGRSSARVYAVMIK 484
           A LLLEEM+EKGFPPCPAAYCSLIN  G+AKRYEAANELF ELKE CG SSARVYAVMIK
Sbjct: 426 AHLLLEEMEEKGFPPCPAAYCSLINGYGKAKRYEAANELFLELKEYCGCSSARVYAVMIK 485

Query: 485 HFGKCGRLSDAVDLFNEMKKLGCKPDVYTYNALMSGMVRAGMIDEAHSLLRTMGENGCTP 544
           HFGKCGRLSDAVDLFNEMKKL CKPDVYTYNALMSGMVRAGMID+A+SLLR M E+GC P
Sbjct: 486 HFGKCGRLSDAVDLFNEMKKLRCKPDVYTYNALMSGMVRAGMIDDAYSLLRRMEEDGCVP 545

Query: 545 DLNSHNIILNGLARTGGPKRAIEMFTKMKHSKIMPDAVSYNTLLSCLSRAGMFEEAAKLM 604
           D+NSHNIILNGLA++GGPKRA+E+FTKM+HS+I PDAVSYNT+L CLSRAGMFEEAA+LM
Sbjct: 546 DINSHNIILNGLAKSGGPKRAMEIFTKMQHSEIKPDAVSYNTILGCLSRAGMFEEAARLM 605

Query: 605 REMKSKGFEYNPITYSSILEAVGKVDEDCSP 636
           ++M +KGFEY+ ITYSSILEAVGKVDED +P
Sbjct: 606 KDMNAKGFEYDQITYSSILEAVGKVDEDRNP 636

BLAST of Lsi07G004980 vs. TrEMBL
Match: V4TLL2_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10023415mg PE=4 SV=1)

HSP 1 Score: 1028.1 bits (2657), Expect = 4.6e-297
Identity = 498/631 (78.92%), Postives = 567/631 (89.86%), Query Frame = 1

Query: 5   SLVSKRSISSLPCLSARIKQTENEIVQMFRVPSPRPEASNFPINRKVPRRDPSVRTLDER 64
           S+ SKR IS+L CL  RIKQTENEIV MF++  P  E  NFP+++K  R+D S R LDER
Sbjct: 6   SIASKRCISTLSCLCQRIKQTENEIVHMFQLSGPIDEMRNFPVSKKFARKDTSARKLDER 65

Query: 65  FIRILKIFKWGSDAEKAIEVLKLKVDHRLVRQVLQIDVEIRVKIQFFKWAGKRKNFHHDS 124
           FIRILKIFKWG DAEKA+EVLK++VDHRLV QVL IDVEI VKIQFFKWAG+R+NF H+S
Sbjct: 66  FIRILKIFKWGPDAEKALEVLKMRVDHRLVHQVLNIDVEINVKIQFFKWAGRRRNFEHNS 125

Query: 125 TTYMALIRCLEESGLVGEMWRTIQDMVRSPCSVGPAELSEILKILGKAKMVNKALSVFYQ 184
           TTYMALIRCL+E+ ++G MW++IQDMVRS C +GP+ LSEI+ ILGKAKMVNKALS+FYQ
Sbjct: 126 TTYMALIRCLDETRMIGVMWKSIQDMVRSTCVMGPSVLSEIVNILGKAKMVNKALSIFYQ 185

Query: 185 IKGRKCKPTATTYNTLILMLMQEGHHEKIHELYNEICSEGNCSPDTITYSALISAFGKLE 244
           IK RKCKPTA TYN++ILMLMQEG++EKIHELYNE+C+EGNC PDT+TYSALISAFGKL 
Sbjct: 186 IKSRKCKPTANTYNSMILMLMQEGYYEKIHELYNEMCNEGNCFPDTVTYSALISAFGKLG 245

Query: 245 RYDFAFQLFDEMKENGLQPTAKIYTTILGMYFKLNKVEAALGLVEEMKGKGCAPTVFTYT 304
           R   A +LFDEMKENGLQPTAKIYTT++ +YFKL +VE ALGLV+EMKGKGCA TV+TYT
Sbjct: 246 RDISAIRLFDEMKENGLQPTAKIYTTLVSIYFKLGEVEKALGLVQEMKGKGCALTVYTYT 305

Query: 305 ELIKGLGKVGRVDDAYSLFFSMSKDGCKPDVVLINNLINILGRAGRLEDALKLFGKMDSL 364
           ELIKGLG+ GRV+DAY LF +M K+GCKPD+VLINNLIN+LGRAGRLEDALKLF KM++L
Sbjct: 306 ELIKGLGRAGRVEDAYGLFMNMLKEGCKPDIVLINNLINVLGRAGRLEDALKLFNKMEAL 365

Query: 365 QCLPNVVTYNTVIKAIFESKAPASEAALWFEKMKANGVAPSSFTYAILIDGFCKTNRVEK 424
           QC PNVVTYNTVIK++FESKAPASEA+ WFEKMKANGV PS FTY+ILIDGFCKTNRVEK
Sbjct: 366 QCKPNVVTYNTVIKSLFESKAPASEASAWFEKMKANGVLPSPFTYSILIDGFCKTNRVEK 425

Query: 425 ALLLLEEMDEKGFPPCPAAYCSLINSLGQAKRYEAANELFQELKENCGRSSARVYAVMIK 484
           A LLLEEM+EKGFPPCPAAYCSLIN  G+AKRYEAANELF ELKE CG SSARVYAVMIK
Sbjct: 426 AHLLLEEMEEKGFPPCPAAYCSLINGYGKAKRYEAANELFLELKEYCGCSSARVYAVMIK 485

Query: 485 HFGKCGRLSDAVDLFNEMKKLGCKPDVYTYNALMSGMVRAGMIDEAHSLLRTMGENGCTP 544
           HFGKCGRLSDAVDLFNEMKKL CKPDVYTYNALMSGMVRAGMID+A+SLLR M E+GC P
Sbjct: 486 HFGKCGRLSDAVDLFNEMKKLRCKPDVYTYNALMSGMVRAGMIDDAYSLLRRMEEDGCVP 545

Query: 545 DLNSHNIILNGLARTGGPKRAIEMFTKMKHSKIMPDAVSYNTLLSCLSRAGMFEEAAKLM 604
           D+NSHNIILNGLA++GGPKRA+E+FTKM+HS+I PDAVSYNT+L CLSRAGMFEEAA+LM
Sbjct: 546 DINSHNIILNGLAKSGGPKRAMEIFTKMQHSEIKPDAVSYNTILGCLSRAGMFEEAARLM 605

Query: 605 REMKSKGFEYNPITYSSILEAVGKVDEDCSP 636
           ++M +KGFEY+ ITYSSILEAVGKVDED +P
Sbjct: 606 KDMNAKGFEYDQITYSSILEAVGKVDEDRNP 636

BLAST of Lsi07G004980 vs. TAIR10
Match: AT3G16010.1 (AT3G16010.1 Pentatricopeptide repeat (PPR-like) superfamily protein)

HSP 1 Score: 917.1 bits (2369), Expect = 5.8e-267
Identity = 454/633 (71.72%), Postives = 533/633 (84.20%), Query Frame = 1

Query: 8   SKRSISSLPCLSARIKQTENEIVQMFRVPSPRPEASNFPINR-KVPRRDPSVRTLDERFI 67
           +KRSISSLP LS R KQTENEIVQMF VP+   E S  P  + K+ R+DPSVR LDERFI
Sbjct: 11  AKRSISSLPHLSQRFKQTENEIVQMFSVPNH--EESEKPQEKWKLSRKDPSVRMLDERFI 70

Query: 68  RILKIFKWGSDAEKAIEVLKLKVDHRLVRQVLQIDVEIRVKIQFFKWAGKRKNFHHDSTT 127
           RI+KIFKWG DAEKA+EVLKLKVDHRLVR +L+IDVEI VKIQFFKWAGKR+NF HD +T
Sbjct: 71  RIVKIFKWGPDAEKALEVLKLKVDHRLVRSILEIDVEINVKIQFFKWAGKRRNFQHDCST 130

Query: 128 YMALIRCLEESGLVGEMWRTIQDMVRSP-CSVGPAELSEILKILGKAKMVNKALSVFYQI 187
           YM LIRCLEE+ L GEM+RTIQ++VR+   SV PA LSE++K LG+AKMV+KALSVFYQ 
Sbjct: 131 YMTLIRCLEEARLYGEMYRTIQEVVRNTYVSVSPAVLSELVKALGRAKMVSKALSVFYQA 190

Query: 188 KGRKCKPTATTYNTLILMLMQEGHHEKIHELYNEICSEGNCSPDTITYSALISAFGKLER 247
           KGRKCKPT++TYN++ILMLMQEG HEK+HE+Y E+C+EG+C PDTITYSALIS++ KL R
Sbjct: 191 KGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGR 250

Query: 248 YDFAFQLFDEMKENGLQPTAKIYTTILGMYFKLNKVEAALGLVEEMKGKGCAPTVFTYTE 307
            D A +LFDEMK+N +QPT KIYTT+LG+YFK+ KVE AL L EEMK  GC+PTV+TYTE
Sbjct: 251 NDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTE 310

Query: 308 LIKGLGKVGRVDDAYSLFFSMSKDGCKPDVVLINNLINILGRAGRLEDALKLFGKMDSLQ 367
           LIKGLGK GRVD+AY  +  M +DG  PDVV +NNL+NILG+ GR+E+   +F +M   +
Sbjct: 311 LIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWR 370

Query: 368 CLPNVVTYNTVIKAIFESKAPASEAALWFEKMKANGVAPSSFTYAILIDGFCKTNRVEKA 427
           C P VV+YNTVIKA+FESKA  SE + WF+KMKA+ V+PS FTY+ILIDG+CKTNRVEKA
Sbjct: 371 CTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKA 430

Query: 428 LLLLEEMDEKGFPPCPAAYCSLINSLGQAKRYEAANELFQELKENCGRSSARVYAVMIKH 487
           LLLLEEMDEKGFPPCPAAYCSLIN+LG+AKRYEAANELF+ELKEN G  S+RVYAVMIKH
Sbjct: 431 LLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKH 490

Query: 488 FGKCGRLSDAVDLFNEMKKLGCKPDVYTYNALMSGMVRAGMIDEAHSLLRTMGENGCTPD 547
           FGKCG+LS+AVDLFNEMK  G  PDVY YNALMSGMV+AGMI+EA+SLLR M ENGC  D
Sbjct: 491 FGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRAD 550

Query: 548 LNSHNIILNGLARTGGPKRAIEMFTKMKHSKIMPDAVSYNTLLSCLSRAGMFEEAAKLMR 607
           +NSHNIILNG ARTG P+RAIEMF  +KHS I PD V+YNTLL C + AGMFEEAA++MR
Sbjct: 551 INSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMR 610

Query: 608 EMKSKGFEYNPITYSSILEAVGKVDEDCSPITS 639
           EMK KGFEY+ ITYSSIL+AVG VD +   ++S
Sbjct: 611 EMKDKGFEYDAITYSSILDAVGNVDHEKDDVSS 641

BLAST of Lsi07G004980 vs. TAIR10
Match: AT3G06920.1 (AT3G06920.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 253.4 bits (646), Expect = 3.6e-67
Identity = 136/466 (29.18%), Postives = 250/466 (53.65%), Query Frame = 1

Query: 168 ILGKAKMVNKA---LSVFYQIKGRKCKPTATTYNTLILMLMQEGHHEKIHELYNEICSEG 227
           ++G    VN +   L++F Q++    +PT   + TLI    +EG  +    L +E+ S  
Sbjct: 174 LIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSS- 233

Query: 228 NCSPDTITYSALISAFGKLERYDFAFQLFDEMKENGLQPTAKIYTTILGMYFKLNKVEAA 287
           +   D + Y+  I +FGK+ + D A++ F E++ NGL+P    YT+++G+  K N+++ A
Sbjct: 234 SLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEA 293

Query: 288 LGLVEEMKGKGCAPTVFTYTELIKGLGKVGRVDDAYSLFFSMSKDGCKPDVVLINNLINI 347
           + + E ++     P  + Y  +I G G  G+ D+AYSL       G  P V+  N ++  
Sbjct: 294 VEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTC 353

Query: 348 LGRAGRLEDALKLFGKMDSLQCLPNVVTYNTVIKAIFESKAPASEAALWFEKMKANGVAP 407
           L + G++++ALK+F +M      PN+ TYN +I  +  +      A    + M+  G+ P
Sbjct: 354 LRKMGKVDEALKVFEEMKK-DAAPNLSTYNILIDMLCRA-GKLDTAFELRDSMQKAGLFP 413

Query: 408 SSFTYAILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINSLGQAKRYEAANELF 467
           +  T  I++D  CK+ ++++A  + EEMD K   P    +CSLI+ LG+  R + A +++
Sbjct: 414 NVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVY 473

Query: 468 QELKENCGRSSARVYAVMIKHFGKCGRLSDAVDLFNEMKKLGCKPDVYTYNALMSGMVRA 527
           +++ ++  R+++ VY  +IK+F   GR  D   ++ +M    C PD+   N  M  M +A
Sbjct: 474 EKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKA 533

Query: 528 GMIDEAHSLLRTMGENGCTPDLNSHNIILNGLARTGGPKRAIEMFTKMKHSKIMPDAVSY 587
           G  ++  ++   +      PD  S++I+++GL + G      E+F  MK    + D  +Y
Sbjct: 534 GEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAY 593

Query: 588 NTLLSCLSRAGMFEEAAKLMREMKSKGFEYNPITYSSILEAVGKVD 631
           N ++    + G   +A +L+ EMK+KGFE   +TY S+++ + K+D
Sbjct: 594 NIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKID 636

BLAST of Lsi07G004980 vs. TAIR10
Match: AT1G62670.1 (AT1G62670.1 rna processing factor 2)

HSP 1 Score: 244.2 bits (622), Expect = 2.2e-64
Identity = 152/512 (29.69%), Postives = 254/512 (49.61%), Query Frame = 1

Query: 122 HDSTTYMALIRCLEESGLVGEMWRTIQDMVRSPCSVGPAELSEILKILGKAKMVNKALSV 181
           H+  TY  LI C      +      +  M++         LS +L     +K +++A+++
Sbjct: 114 HNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVAL 173

Query: 182 FYQIKGRKCKPTATTYNTLILMLMQEGHHEKIHELYNEICSEGNCSPDTITYSALISAFG 241
             Q+     +P   T+NTLI  L       +   L + + ++G C PD +TY  +++   
Sbjct: 174 VDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKG-CQPDLVTYGVVVNGLC 233

Query: 242 KLERYDFAFQLFDEMKENGLQPTAKIYTTILGMYFKLNKVEAALGLVEEMKGKGCAPTVF 301
           K    D AF L ++M++  L+P   IY TI+    K   ++ AL L +EM+ KG  P V 
Sbjct: 234 KRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVV 293

Query: 302 TYTELIKGLGKVGRVDDAYSLFFSMSKDGCKPDVVLINNLINILGRAGRLEDALKLFGKM 361
           TY+ LI  L   GR  DA  L   M +    PDV   + LI+   + G+L +A KL+ +M
Sbjct: 294 TYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEM 353

Query: 362 DSLQCLPNVVTYNTVIKAIFESKAPASEAALWFEKMKANGVAPSSFTYAILIDGFCKTNR 421
                 P++VTY+++I   F       EA   FE M +    P   TY  LI GFCK  R
Sbjct: 354 VKRSIDPSIVTYSSLING-FCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKR 413

Query: 422 VEKALLLLEEMDEKGFPPCPAAYCSLINSLGQAKRYEAANELFQELKENCGRSSARVYAV 481
           VE+ + +  EM ++G       Y  LI  L QA   + A E+F+E+  +    +   Y  
Sbjct: 414 VEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNT 473

Query: 482 MIKHFGKCGRLSDAVDLFNEMKKLGCKPDVYTYNALMSGMVRAGMIDEAHSLLRTMGENG 541
           ++    K G+L  A+ +F  +++   +P +YTYN ++ GM +AG +++   L   +   G
Sbjct: 474 LLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKG 533

Query: 542 CTPDLNSHNIILNGLARTGGPKRAIEMFTKMKHSKIMPDAVSYNTLLSCLSRAGMFEEAA 601
             PD+ ++N +++G  R G  + A  +F +MK    +P++  YNTL+    R G  E +A
Sbjct: 534 VKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASA 593

Query: 602 KLMREMKSKGFEYNPITYSSILEAV--GKVDE 632
           +L++EM+S GF  +  T   +   +  G++D+
Sbjct: 594 ELIKEMRSCGFAGDASTIGLVTNMLHDGRLDK 623

BLAST of Lsi07G004980 vs. TAIR10
Match: AT1G63080.1 (AT1G63080.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 243.4 bits (620), Expect = 3.7e-64
Identity = 149/512 (29.10%), Postives = 251/512 (49.02%), Query Frame = 1

Query: 122 HDSTTYMALIRCLEESGLVGEMWRTIQDMVRSPCSVGPAELSEILKILGKAKMVNKALSV 181
           H+  TY  +I CL     +      +  M++         L+ +L        +++A+++
Sbjct: 98  HNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVAL 157

Query: 182 FYQIKGRKCKPTATTYNTLILMLMQEGHHEKIHELYNEICSEGNCSPDTITYSALISAFG 241
             Q+     +P   T+ TL+  L Q     +   L   +  +G C PD +TY A+I+   
Sbjct: 158 VDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKG-CQPDLVTYGAVINGLC 217

Query: 242 KLERYDFAFQLFDEMKENGLQPTAKIYTTILGMYFKLNKVEAALGLVEEMKGKGCAPTVF 301
           K    D A  L ++M++  ++    IY+T++    K   V+ AL L  EM  KG  P VF
Sbjct: 218 KRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVF 277

Query: 302 TYTELIKGLGKVGRVDDAYSLFFSMSKDGCKPDVVLINNLINILGRAGRLEDALKLFGKM 361
           TY+ LI  L   GR  DA  L   M +    P+VV  N+LI+   + G+L +A KLF +M
Sbjct: 278 TYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEM 337

Query: 362 DSLQCLPNVVTYNTVIKAIFESKAPASEAALWFEKMKANGVAPSSFTYAILIDGFCKTNR 421
                 PN+VTYN++I   F       EA   F  M +    P   TY  LI+GFCK  +
Sbjct: 338 IQRSIDPNIVTYNSLING-FCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKK 397

Query: 422 VEKALLLLEEMDEKGFPPCPAAYCSLINSLGQAKRYEAANELFQELKENCGRSSARVYAV 481
           V   + L  +M  +G       Y +LI+   QA   + A  +F+++  +    +   Y  
Sbjct: 398 VVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNT 457

Query: 482 MIKHFGKCGRLSDAVDLFNEMKKLGCKPDVYTYNALMSGMVRAGMIDEAHSLLRTMGENG 541
           ++    K G+L  A+ +F  ++K   +PD+YTYN +  GM +AG +++   L  ++   G
Sbjct: 458 LLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKG 517

Query: 542 CTPDLNSHNIILNGLARTGGPKRAIEMFTKMKHSKIMPDAVSYNTLLSCLSRAGMFEEAA 601
             PD+ ++N +++G  + G  + A  +F KMK    +PD+ +YNTL+    R G    +A
Sbjct: 518 VKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASA 577

Query: 602 KLMREMKSKGFEYNPITYSSILEAV--GKVDE 632
           +L++EM+S  F  +  TY  + + +  G++D+
Sbjct: 578 ELIKEMRSCRFAGDASTYGLVTDMLHDGRLDK 607

BLAST of Lsi07G004980 vs. TAIR10
Match: AT1G62910.1 (AT1G62910.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 238.4 bits (607), Expect = 1.2e-62
Identity = 147/512 (28.71%), Postives = 252/512 (49.22%), Query Frame = 1

Query: 122 HDSTTYMALIRCLEESGLVGEMWRTIQDMVRSPCSVGPAELSEILKILGKAKMVNKALSV 181
           HD  TY   I C      +      +  M++         LS +L     +K ++ A+++
Sbjct: 116 HDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVAL 175

Query: 182 FYQIKGRKCKPTATTYNTLILMLMQEGHHEKIHELYNEICSEGNCSPDTITYSALISAFG 241
             Q+     KP   T+ TLI  L       +   L +++   G C PD +TY  +++   
Sbjct: 176 VDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRG-CQPDLVTYGTVVNGLC 235

Query: 242 KLERYDFAFQLFDEMKENGLQPTAKIYTTILGMYFKLNKVEAALGLVEEMKGKGCAPTVF 301
           K    D A  L  +M++  ++    IY TI+    K   ++ AL L  EM  KG  P VF
Sbjct: 236 KRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVF 295

Query: 302 TYTELIKGLGKVGRVDDAYSLFFSMSKDGCKPDVVLINNLINILGRAGRLEDALKLFGKM 361
           TY+ LI  L   GR  DA  L   M +    P+VV  + LI+   + G+L +A KL+ +M
Sbjct: 296 TYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM 355

Query: 362 DSLQCLPNVVTYNTVIKAIFESKAPASEAALWFEKMKANGVAPSSFTYAILIDGFCKTNR 421
                 P++ TY+++I   F       EA   FE M +    P+  TY+ LI GFCK  R
Sbjct: 356 IKRSIDPDIFTYSSLING-FCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKR 415

Query: 422 VEKALLLLEEMDEKGFPPCPAAYCSLINSLGQAKRYEAANELFQELKENCGRSSARVYAV 481
           VE+ + L  EM ++G       Y +LI+   QA+  + A  +F+++       +   Y +
Sbjct: 416 VEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNI 475

Query: 482 MIKHFGKCGRLSDAVDLFNEMKKLGCKPDVYTYNALMSGMVRAGMIDEAHSLLRTMGENG 541
           ++    K G+L+ A+ +F  +++   +PD+YTYN ++ GM +AG +++   L   +   G
Sbjct: 476 LLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKG 535

Query: 542 CTPDLNSHNIILNGLARTGGPKRAIEMFTKMKHSKIMPDAVSYNTLLSCLSRAGMFEEAA 601
            +P++ ++N +++G  R G  + A  +  KMK    +P++ +YNTL+    R G  E +A
Sbjct: 536 VSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASA 595

Query: 602 KLMREMKSKGFEYNPITYSSILEAV--GKVDE 632
           +L++EM+S GF  +  T   +   +  G++D+
Sbjct: 596 ELIKEMRSCGFAGDASTIGLVTNMLHDGRLDK 625

BLAST of Lsi07G004980 vs. NCBI nr
Match: gi|659093352|ref|XP_008447498.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g16010 [Cucumis melo])

HSP 1 Score: 1189.5 bits (3076), Expect = 0.0e+00
Identity = 593/639 (92.80%), Postives = 610/639 (95.46%), Query Frame = 1

Query: 1   MNFTSLVSKRSISSLPCLSARIKQTENEIVQMFRVPSPRPEASNFPINRKVPRRDPSVRT 60
           MNFTSL SKR ISSL  L+ARIKQTENEIV+MFRVPSPRPEASNFP NRKV RRDPSVRT
Sbjct: 1   MNFTSLASKRCISSLAPLAARIKQTENEIVEMFRVPSPRPEASNFPFNRKVLRRDPSVRT 60

Query: 61  LDERFIRILKIFKWGSDAEKAIEVLKLKVDHRLVRQVLQIDVEIRVKIQFFKWAGKRKNF 120
           LDERFIRILKIFKWGSDAEKAIEVLKLKVDHRLVRQVL+IDVEIRVKIQFFKWAGKRKNF
Sbjct: 61  LDERFIRILKIFKWGSDAEKAIEVLKLKVDHRLVRQVLEIDVEIRVKIQFFKWAGKRKNF 120

Query: 121 HHDSTTYMALIRCLEESGLVGEMWRTIQDMVRSPCSVGPAELSEILKILGKAKMVNKALS 180
           HHDSTTYMALIRCLEESGLVGEMW TIQDM+RSPCSVGPAE SEILKILGKAKMVNKALS
Sbjct: 121 HHDSTTYMALIRCLEESGLVGEMWGTIQDMIRSPCSVGPAEWSEILKILGKAKMVNKALS 180

Query: 181 VFYQIKGRKCKPTATTYNTLILMLMQEGHHEKIHELYNEICSEGNCSPDTITYSALISAF 240
           VFYQIK  KC PTAT YNTLILMLMQEGHHEKIHE+YNEICSEGNC PDTITYSALISAF
Sbjct: 181 VFYQIKRHKCNPTATVYNTLILMLMQEGHHEKIHEVYNEICSEGNCFPDTITYSALISAF 240

Query: 241 GKLERYDFAFQLFDEMKENGLQPTAKIYTTILGMYFKLNKVEAALGLVEEMKGKGCAPTV 300
           GKLERYDFAF+LFDEMKENGL PTAKIYTTILGMYFKLNKVEAAL LVEEMKGKGCAPTV
Sbjct: 241 GKLERYDFAFRLFDEMKENGLHPTAKIYTTILGMYFKLNKVEAALRLVEEMKGKGCAPTV 300

Query: 301 FTYTELIKGLGKVGRVDDAYSLFFSMSKDGCKPDVVLINNLINILGRAGRLEDALKLFGK 360
           FTYTELIKGLGK GRVDDAYSLFF+MSKDGCKPDVVLINNLINILGRAGRLEDALKLFGK
Sbjct: 301 FTYTELIKGLGKAGRVDDAYSLFFNMSKDGCKPDVVLINNLINILGRAGRLEDALKLFGK 360

Query: 361 MDSLQCLPNVVTYNTVIKAIFESKAPASEAALWFEKMKANGVAPSSFTYAILIDGFCKTN 420
           MDSLQC PNVVTYNTVIKAIFESKAPASEAALWFEKMKA+GVAPSSFTYAILIDGFCKTN
Sbjct: 361 MDSLQCAPNVVTYNTVIKAIFESKAPASEAALWFEKMKADGVAPSSFTYAILIDGFCKTN 420

Query: 421 RVEKALLLLEEMDEKGFPPCPAAYCSLINSLGQAKRYEAANELFQELKENCGRSSARVYA 480
           RVEKALLLLEEMDEKGFPPCPAAYCSLI+SLG+AKRYEAANELFQELKENCGR+SARVYA
Sbjct: 421 RVEKALLLLEEMDEKGFPPCPAAYCSLIDSLGRAKRYEAANELFQELKENCGRASARVYA 480

Query: 481 VMIKHFGKCGRLSDAVDLFNEMKKLGCKPDVYTYNALMSGMVRAGMIDEAHSLLRTMGEN 540
           VMIKH GKCGRLSDAVDLFNEMKKLGC PDVYTYNALMSGM+RAGMI EAHSL+RTM EN
Sbjct: 481 VMIKHLGKCGRLSDAVDLFNEMKKLGCSPDVYTYNALMSGMIRAGMIHEAHSLMRTMREN 540

Query: 541 GCTPDLNSHNIILNGLARTGGPKRAIEMFTKMKHSKIMPDAVSYNTLLSCLSRAGMFEEA 600
           G TPD+NSHNIILNGLA+TGGPKRAIEMFTKMK SKIMPDAVSYNT+LSCLSRAGMFE A
Sbjct: 541 GSTPDINSHNIILNGLAKTGGPKRAIEMFTKMKQSKIMPDAVSYNTILSCLSRAGMFEMA 600

Query: 601 AKLMREMKSKGFEYNPITYSSILEAVGKVDEDCSPITSL 640
           AKLMREMK KGFEY+ ITYSSILEAVGKVDEDC P  SL
Sbjct: 601 AKLMREMKLKGFEYDSITYSSILEAVGKVDEDCIPTASL 639

BLAST of Lsi07G004980 vs. NCBI nr
Match: gi|449467657|ref|XP_004151539.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g16010 [Cucumis sativus])

HSP 1 Score: 1172.9 bits (3033), Expect = 0.0e+00
Identity = 585/635 (92.13%), Postives = 601/635 (94.65%), Query Frame = 1

Query: 1   MNFTSLVSKRSISSLPCLSARIKQTENEIVQMFRVPSPRPEASNFPINRKVPRRDPSVRT 60
           MNFTSL SKRSISSL  LS RIKQTENEIVQMFRV +P PEASNF  NRKV RRDPSVRT
Sbjct: 1   MNFTSLASKRSISSLHPLSTRIKQTENEIVQMFRVSTPSPEASNFSFNRKVLRRDPSVRT 60

Query: 61  LDERFIRILKIFKWGSDAEKAIEVLKLKVDHRLVRQVLQIDVEIRVKIQFFKWAGKRKNF 120
           LDERFIRILKIFKWGSDAEKAIEVLKLKVDHRLV QVL IDVEIR KIQFFKWAGKR++F
Sbjct: 61  LDERFIRILKIFKWGSDAEKAIEVLKLKVDHRLVHQVLDIDVEIRAKIQFFKWAGKRQHF 120

Query: 121 HHDSTTYMALIRCLEESGLVGEMWRTIQDMVRSPCSVGPAELSEILKILGKAKMVNKALS 180
            HDSTTYMALIRCLEESGLV EMWRTIQDM+RSPCSVGPAE SEILKILGKAKMVNKALS
Sbjct: 121 QHDSTTYMALIRCLEESGLVDEMWRTIQDMIRSPCSVGPAEWSEILKILGKAKMVNKALS 180

Query: 181 VFYQIKGRKCKPTATTYNTLILMLMQEGHHEKIHELYNEICSEGNCSPDTITYSALISAF 240
           VFYQIKGRKC PTAT YNTLILMLM EGHHEKIHELYNEICSEGNCSPDTITYSALISAF
Sbjct: 181 VFYQIKGRKCNPTATVYNTLILMLMHEGHHEKIHELYNEICSEGNCSPDTITYSALISAF 240

Query: 241 GKLERYDFAFQLFDEMKENGLQPTAKIYTTILGMYFKLNKVEAALGLVEEMKGKGCAPTV 300
           GKLERYDFAF+LFDEMKENGL PT KIYTTIL MYFKLNKVEAAL LVEEMKGKGCAPTV
Sbjct: 241 GKLERYDFAFRLFDEMKENGLHPTEKIYTTILAMYFKLNKVEAALRLVEEMKGKGCAPTV 300

Query: 301 FTYTELIKGLGKVGRVDDAYSLFFSMSKDGCKPDVVLINNLINILGRAGRLEDALKLFGK 360
           FTYTELIKGLGKVGRVDDAYSLFF+M KDGCKPDVVLINNLINILGRAGRLEDALKLFGK
Sbjct: 301 FTYTELIKGLGKVGRVDDAYSLFFNMLKDGCKPDVVLINNLINILGRAGRLEDALKLFGK 360

Query: 361 MDSLQCLPNVVTYNTVIKAIFESKAPASEAALWFEKMKANGVAPSSFTYAILIDGFCKTN 420
           MDSLQC PNVVTYNTVIKAIFESKAPASEAALWFEKMKANG+APSSFTYAILIDGFCKTN
Sbjct: 361 MDSLQCAPNVVTYNTVIKAIFESKAPASEAALWFEKMKANGIAPSSFTYAILIDGFCKTN 420

Query: 421 RVEKALLLLEEMDEKGFPPCPAAYCSLINSLGQAKRYEAANELFQELKENCGRSSARVYA 480
           RVEKALLLLEEMDEKGFPPCPAAYCSLI+SLG+AKRYEAANELFQELKENCGRSSARVYA
Sbjct: 421 RVEKALLLLEEMDEKGFPPCPAAYCSLIDSLGRAKRYEAANELFQELKENCGRSSARVYA 480

Query: 481 VMIKHFGKCGRLSDAVDLFNEMKKLGCKPDVYTYNALMSGMVRAGMIDEAHSLLRTMGEN 540
           VMIKHFG CGRLSDAVDLF EMKKLGC PDVYTYNALMSGM+RAGMIDEAHSL+R M EN
Sbjct: 481 VMIKHFGNCGRLSDAVDLFCEMKKLGCSPDVYTYNALMSGMIRAGMIDEAHSLMRNMREN 540

Query: 541 GCTPDLNSHNIILNGLARTGGPKRAIEMFTKMKHSKIMPDAVSYNTLLSCLSRAGMFEEA 600
           GCTPD+ SHNIILNGLA+TGGPKRAIEMFTKMK S+IMPDAVSYNT+LSCLSRAGMFE A
Sbjct: 541 GCTPDIKSHNIILNGLAKTGGPKRAIEMFTKMKESEIMPDAVSYNTILSCLSRAGMFEMA 600

Query: 601 AKLMREMKSKGFEYNPITYSSILEAVGKVDEDCSP 636
           AKLMREMK KGFEY+ ITYSSILEAVGKVDEDCSP
Sbjct: 601 AKLMREMKLKGFEYDSITYSSILEAVGKVDEDCSP 635

BLAST of Lsi07G004980 vs. NCBI nr
Match: gi|731402468|ref|XP_010654675.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g16010 [Vitis vinifera])

HSP 1 Score: 1053.5 bits (2723), Expect = 1.5e-304
Identity = 510/631 (80.82%), Postives = 574/631 (90.97%), Query Frame = 1

Query: 5   SLVSKRSISSLPCLSARIKQTENEIVQMFRVPSPRPEASNFPINRKVPRRDPSVRTLDER 64
           S+  +R IS+LP LS RIKQTE+EIVQMF++ SP+ E    P+N+K PR +PSVRTLDER
Sbjct: 5   SIPLRRMISTLPHLSQRIKQTESEIVQMFKLSSPKDEIQRLPMNQKFPRNNPSVRTLDER 64

Query: 65  FIRILKIFKWGSDAEKAIEVLKLKVDHRLVRQVLQIDVEIRVKIQFFKWAGKRKNFHHDS 124
           FIRILKIFKWG DAEKA+EVLKLKVDHRLVR+VL+IDVEI VKIQFFKWAGKR+NF HDS
Sbjct: 65  FIRILKIFKWGPDAEKALEVLKLKVDHRLVREVLKIDVEIHVKIQFFKWAGKRRNFEHDS 124

Query: 125 TTYMALIRCLEESGLVGEMWRTIQDMVRSPCSVGPAELSEILKILGKAKMVNKALSVFYQ 184
           TTYMALI CL+E+G++GEMW+TIQ+MVRS C +GPA+LSEI+K+LGKAKMVNKALS+FYQ
Sbjct: 125 TTYMALIHCLDEAGMLGEMWKTIQEMVRSTCVIGPADLSEIVKVLGKAKMVNKALSIFYQ 184

Query: 185 IKGRKCKPTATTYNTLILMLMQEGHHEKIHELYNEICSEGNCSPDTITYSALISAFGKLE 244
           IKGRKCKPT+ TYN++ILMLMQEGHHEK+HELYNE+C+EG+C PDT+TYSALI+AFGKL 
Sbjct: 185 IKGRKCKPTSNTYNSMILMLMQEGHHEKVHELYNEMCNEGDCLPDTVTYSALIAAFGKLG 244

Query: 245 RYDFAFQLFDEMKENGLQPTAKIYTTILGMYFKLNKVEAALGLVEEMKGKGCAPTVFTYT 304
           R D A  LFDEMKENGL PTAKIYTTILG+YFKL +VE ALGLV+EMK KGCA TV+TYT
Sbjct: 245 RDDSAISLFDEMKENGLHPTAKIYTTILGIYFKLGRVEKALGLVQEMKEKGCALTVYTYT 304

Query: 305 ELIKGLGKVGRVDDAYSLFFSMSKDGCKPDVVLINNLINILGRAGRLEDALKLFGKMDSL 364
           ELIKG+GK G+V++AYS+F +M K+GCKPDVVLINNLIN+LG+AGRL DA+KLF +M+SL
Sbjct: 305 ELIKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLINNLINLLGKAGRLADAIKLFEEMESL 364

Query: 365 QCLPNVVTYNTVIKAIFESKAPASEAALWFEKMKANGVAPSSFTYAILIDGFCKTNRVEK 424
           QC PNVVTYNTVIKA+FESKA ASEA LW+EKMK NGV PSSFTY+ILIDGFCKTNRVEK
Sbjct: 365 QCTPNVVTYNTVIKALFESKARASEAFLWYEKMKENGVVPSSFTYSILIDGFCKTNRVEK 424

Query: 425 ALLLLEEMDEKGFPPCPAAYCSLINSLGQAKRYEAANELFQELKENCGRSSARVYAVMIK 484
           ALLLLEEMDEKGF PCPAAYCSLIN+LG+AKRYEAANELFQEL+ENCG SSARVYAVMIK
Sbjct: 425 ALLLLEEMDEKGFAPCPAAYCSLINALGKAKRYEAANELFQELRENCGYSSARVYAVMIK 484

Query: 485 HFGKCGRLSDAVDLFNEMKKLGCKPDVYTYNALMSGMVRAGMIDEAHSLLRTMGENGCTP 544
           H GKCGRLS+AVDLFNEMKKLGC PDVY YNALMSGMVR GM DEAHSLLRTM ENGCTP
Sbjct: 485 HLGKCGRLSEAVDLFNEMKKLGCNPDVYAYNALMSGMVRVGMTDEAHSLLRTMEENGCTP 544

Query: 545 DLNSHNIILNGLARTGGPKRAIEMFTKMKHSKIMPDAVSYNTLLSCLSRAGMFEEAAKLM 604
           DLNSHNIILNG ARTGGPK AIEMFT+MK+SKI PD VSYNT+L CLSRAGMFEEAAKLM
Sbjct: 545 DLNSHNIILNGFARTGGPKGAIEMFTRMKNSKIKPDVVSYNTVLGCLSRAGMFEEAAKLM 604

Query: 605 REMKSKGFEYNPITYSSILEAVGKVDEDCSP 636
           +EM SKGFEY+ ITYSSILEAVGK+DED +P
Sbjct: 605 KEMNSKGFEYDLITYSSILEAVGKIDEDHTP 635

BLAST of Lsi07G004980 vs. NCBI nr
Match: gi|802603907|ref|XP_012073332.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g16010 [Jatropha curcas])

HSP 1 Score: 1044.3 bits (2699), Expect = 8.9e-302
Identity = 511/632 (80.85%), Postives = 563/632 (89.08%), Query Frame = 1

Query: 1   MNFTSLVSKRSISSLPCLSARIKQTENEIVQMFRVPSPRPEASNFPINRKVPRRDPSVRT 60
           M F  + SKRSIS+LP L  RIKQTENEIVQMFR+PS   E  N P+NRK  R DPS+R 
Sbjct: 4   MVFGFIASKRSISTLPHLCERIKQTENEIVQMFRLPSRNDEMQNLPMNRKFSRNDPSIRK 63

Query: 61  LDERFIRILKIFKWGSDAEKAIEVLKLKVDHRLVRQVLQIDVEIRVKIQFFKWAGKRKNF 120
           LDERFIRILKIFKWG DAEKA+EVLKLKVDHRLVR+VL+IDVE+ VKI+FFKW  KR+NF
Sbjct: 64  LDERFIRILKIFKWGPDAEKALEVLKLKVDHRLVREVLKIDVEVHVKIKFFKWVAKRRNF 123

Query: 121 HHDSTTYMALIRCLEESGLVGEMWRTIQDMVRSPCSVGPAELSEILKILGKAKMVNKALS 180
            HDSTTY ALI CL+E+GL GEMW+ IQDMVRS C + PA+LSEI+KILGK+KMVNKALS
Sbjct: 124 EHDSTTYFALINCLDEAGLYGEMWKIIQDMVRSTCIISPADLSEIVKILGKSKMVNKALS 183

Query: 181 VFYQIKGRKCKPTATTYNTLILMLMQEGHHEKIHELYNEICSEGNCSPDTITYSALISAF 240
           VFYQIKGRKCKPTA TYN++IL+LMQE H+EK+HELYNE+C+EGNC PDT+TYS+LISAF
Sbjct: 184 VFYQIKGRKCKPTANTYNSMILILMQESHYEKVHELYNEMCNEGNCFPDTLTYSSLISAF 243

Query: 241 GKLERYDFAFQLFDEMKENGLQPTAKIYTTILGMYFKLNKVEAALGLVEEMKGKGCAPTV 300
           GKL+R D A +LFDEMKENGL PT KIYTT+LG+YFKL+KVE AL L+ EMK KGC PTV
Sbjct: 244 GKLDRDDSAIRLFDEMKENGLHPTPKIYTTLLGIYFKLDKVEKALDLIREMKVKGCTPTV 303

Query: 301 FTYTELIKGLGKVGRVDDAYSLFFSMSKDGCKPDVVLINNLINILGRAGRLEDALKLFGK 360
           FTYTE IKGLGK GRVDDAYS+F  M KDGC PD+VL+N LINILG+A R EDAL+LFG+
Sbjct: 304 FTYTEWIKGLGKAGRVDDAYSVFLDMIKDGCAPDIVLMNTLINILGKAHRFEDALRLFGQ 363

Query: 361 MDSLQCLPNVVTYNTVIKAIFESKAPASEAALWFEKMKANGVAPSSFTYAILIDGFCKTN 420
           M++ QC PNVVTYNTVIKA+FE KAPASEAA WFEKMKANGVAPSSFTY+ILIDGFCKTN
Sbjct: 364 MEAWQCKPNVVTYNTVIKALFECKAPASEAASWFEKMKANGVAPSSFTYSILIDGFCKTN 423

Query: 421 RVEKALLLLEEMDEKGFPPCPAAYCSLINSLGQAKRYEAANELFQELKENCGRSSARVYA 480
           RVEKALLLLEEMDEKGFPP PAAYCSLINSLG+AKRYEAANELF ELKENCG +SARVYA
Sbjct: 424 RVEKALLLLEEMDEKGFPPSPAAYCSLINSLGKAKRYEAANELFLELKENCGCTSARVYA 483

Query: 481 VMIKHFGKCGRLSDAVDLFNEMKKLGCKPDVYTYNALMSGMVRAGMIDEAHSLLRTMGEN 540
           VMIK FGKCGRLSDA+DLFNEMKKLGCKPDVYTYNALMSGMVRAGMIDEAHSLLRTM EN
Sbjct: 484 VMIKQFGKCGRLSDAIDLFNEMKKLGCKPDVYTYNALMSGMVRAGMIDEAHSLLRTMEEN 543

Query: 541 GCTPDLNSHNIILNGLARTGGPKRAIEMFTKMKHSKIMPDAVSYNTLLSCLSRAGMFEEA 600
           GC PD+NSHNIILNGLARTG P RAIEMFTKMKHS I PDAVSYNT+L CLSRAGMFEEA
Sbjct: 544 GCFPDINSHNIILNGLARTGVPNRAIEMFTKMKHSLIKPDAVSYNTVLGCLSRAGMFEEA 603

Query: 601 AKLMREMKSKGFEYNPITYSSILEAVGKVDED 633
           A+LM+EM + GFEY+ ITYSSILEAVGKVDED
Sbjct: 604 ARLMKEMNTNGFEYDQITYSSILEAVGKVDED 635

BLAST of Lsi07G004980 vs. NCBI nr
Match: gi|590618654|ref|XP_007024106.1| (Pentatricopeptide repeat (PPR-like) superfamily protein isoform 1 [Theobroma cacao])

HSP 1 Score: 1036.6 bits (2679), Expect = 1.9e-299
Identity = 505/626 (80.67%), Postives = 567/626 (90.58%), Query Frame = 1

Query: 9   KRSISSLPCLSARIKQTENEIVQMFRVPSPRPEASNFPINRKVPRRDPSVRTLDERFIRI 68
           +RSIS+L  L   IKQTENEIVQMF++PSP+ EA +  + RK     PSVRTLDERFIRI
Sbjct: 11  RRSISTLSHLCEPIKQTENEIVQMFQLPSPKKEAQDLAVKRK----KPSVRTLDERFIRI 70

Query: 69  LKIFKWGSDAEKAIEVLKLKVDHRLVRQVLQIDVEIRVKIQFFKWAGKRKNFHHDSTTYM 128
           LKIFKWGSDAEKA+EVLKLKVD RLVR+VL IDVEI VKIQFFKWAGKR+NF HDSTTYM
Sbjct: 71  LKIFKWGSDAEKALEVLKLKVDQRLVREVLMIDVEINVKIQFFKWAGKRRNFEHDSTTYM 130

Query: 129 ALIRCLEESGLVGEMWRTIQDMVRSPCSVGPAELSEILKILGKAKMVNKALSVFYQIKGR 188
            LI CL+E+GLVGEMW+TIQ+M+RS C++GPAELSEI++ILGKAKMVNKALS+FYQIK R
Sbjct: 131 TLIHCLDEAGLVGEMWKTIQEMLRSTCAIGPAELSEIVRILGKAKMVNKALSIFYQIKCR 190

Query: 189 KCKPTATTYNTLILMLMQEGHHEKIHELYNEICSEGNCSPDTITYSALISAFGKLERYDF 248
           KCKPT++TYN +ILMLMQEGHHEK+HELYNE+C+EGNC PDT+TYSALIS F KL R+D 
Sbjct: 191 KCKPTSSTYNNIILMLMQEGHHEKVHELYNEMCNEGNCLPDTVTYSALISTFSKLGRHDS 250

Query: 249 AFQLFDEMKENGLQPTAKIYTTILGMYFKLNKVEAALGLVEEMKGKGCAPTVFTYTELIK 308
           A +LF+EMKENGLQPT+KIYTT++ +YFKL +   ALGLV+EMKGKGC PTVFTYTELIK
Sbjct: 251 AIRLFEEMKENGLQPTSKIYTTLIKIYFKLGETWKALGLVQEMKGKGCKPTVFTYTELIK 310

Query: 309 GLGKVGRVDDAYSLFFSMSKDGCKPDVVLINNLINILGRAGRLEDALKLFGKMDSLQCLP 368
           GLGK GRV DAY +F +M K+G KPDVVLINN+INILG+AGRLEDA KLF KM S QC+P
Sbjct: 311 GLGKAGRVQDAYGIFMNMLKEGGKPDVVLINNMINILGKAGRLEDAFKLFNKMKSWQCIP 370

Query: 369 NVVTYNTVIKAIFESKAPASEAALWFEKMKANGVAPSSFTYAILIDGFCKTNRVEKALLL 428
           NVVTYNTVIKA+F+SKAP+SEA+LWFEKMKA+GV PSSFTY+ILIDGFCKTN+VEKALLL
Sbjct: 371 NVVTYNTVIKALFDSKAPSSEASLWFEKMKADGVVPSSFTYSILIDGFCKTNKVEKALLL 430

Query: 429 LEEMDEKGFPPCPAAYCSLINSLGQAKRYEAANELFQELKENCGRSSARVYAVMIKHFGK 488
           LEEMDE+GFPPCPAAYCSLINSLG+AKRYEAANELFQELKENCG SSARVYAVMIKHFGK
Sbjct: 431 LEEMDERGFPPCPAAYCSLINSLGKAKRYEAANELFQELKENCGCSSARVYAVMIKHFGK 490

Query: 489 CGRLSDAVDLFNEMKKLGCKPDVYTYNALMSGMVRAGMIDEAHSLLRTMGENGCTPDLNS 548
           CGRLSDAVDLFNEMKKLGC PDVY YNALMSGMVRAGMI+EAHSLLRTM ENGC PDLNS
Sbjct: 491 CGRLSDAVDLFNEMKKLGCNPDVYAYNALMSGMVRAGMINEAHSLLRTMEENGCAPDLNS 550

Query: 549 HNIILNGLARTGGPKRAIEMFTKMKHSKIMPDAVSYNTLLSCLSRAGMFEEAAKLMREMK 608
           HNIILNGLARTGGP+RA+EMF KM++S I PDAVSYNT+L CLSRAGM EEAAKLM+EMK
Sbjct: 551 HNIILNGLARTGGPRRAMEMFMKMENSNIKPDAVSYNTVLGCLSRAGMLEEAAKLMKEMK 610

Query: 609 SKGFEYNPITYSSILEAVGKVDEDCS 635
           ++GFEY+ ITYSSILEAVGK+DED S
Sbjct: 611 ARGFEYDLITYSSILEAVGKIDEDRS 632

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
PP236_ARATH1.0e-26571.72Pentatricopeptide repeat-containing protein At3g16010 OS=Arabidopsis thaliana GN... [more]
PP217_ARATH6.4e-6629.18Pentatricopeptide repeat-containing protein At3g06920 OS=Arabidopsis thaliana GN... [more]
PPR91_ARATH3.9e-6329.69Pentatricopeptide repeat-containing protein At1g62670, mitochondrial OS=Arabidop... [more]
PPR98_ARATH6.6e-6329.10Pentatricopeptide repeat-containing protein At1g63080, mitochondrial OS=Arabidop... [more]
PPR94_ARATH2.1e-6128.71Pentatricopeptide repeat-containing protein At1g62910 OS=Arabidopsis thaliana GN... [more]
Match NameE-valueIdentityDescription
D7U0L2_VITVI1.0e-30480.82Putative uncharacterized protein OS=Vitis vinifera GN=VIT_09s0002g04690 PE=4 SV=... [more]
A0A067KZG9_JATCU6.2e-30280.85Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06260 PE=4 SV=1[more]
A0A061GBG9_THECC1.3e-29980.67Pentatricopeptide repeat (PPR-like) superfamily protein isoform 1 OS=Theobroma c... [more]
A0A067DF35_CITSI4.6e-29778.92Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g006614mg PE=4 SV=1[more]
V4TLL2_9ROSI4.6e-29778.92Uncharacterized protein OS=Citrus clementina GN=CICLE_v10023415mg PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT3G16010.15.8e-26771.72 Pentatricopeptide repeat (PPR-like) superfamily protein[more]
AT3G06920.13.6e-6729.18 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT1G62670.12.2e-6429.69 rna processing factor 2[more]
AT1G63080.13.7e-6429.10 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT1G62910.11.2e-6228.71 Pentatricopeptide repeat (PPR) superfamily protein[more]
Match NameE-valueIdentityDescription
gi|659093352|ref|XP_008447498.1|0.0e+0092.80PREDICTED: pentatricopeptide repeat-containing protein At3g16010 [Cucumis melo][more]
gi|449467657|ref|XP_004151539.1|0.0e+0092.13PREDICTED: pentatricopeptide repeat-containing protein At3g16010 [Cucumis sativu... [more]
gi|731402468|ref|XP_010654675.1|1.5e-30480.82PREDICTED: pentatricopeptide repeat-containing protein At3g16010 [Vitis vinifera... [more]
gi|802603907|ref|XP_012073332.1|8.9e-30280.85PREDICTED: pentatricopeptide repeat-containing protein At3g16010 [Jatropha curca... [more]
gi|590618654|ref|XP_007024106.1|1.9e-29980.67Pentatricopeptide repeat (PPR-like) superfamily protein isoform 1 [Theobroma cac... [more]
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0003723RNA binding
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR002885Pentatricopeptide_repeat
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0003723 RNA binding
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi07G004980.1Lsi07G004980.1mRNA


Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 126..153
score: 0.86coord: 443..470
score: 8.1E-4coord: 478..507
score: 2.
IPR002885Pentatricopeptide repeatPFAMPF12854PPR_1coord: 329..361
score: 9.
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 579..626
score: 2.0E-14coord: 368..418
score: 2.1E-15coord: 509..558
score: 4.5E-14coord: 267..312
score: 7.5E-12coord: 192..241
score: 7.1
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 582..615
score: 1.5E-10coord: 196..230
score: 4.7E-5coord: 267..299
score: 2.3E-6coord: 301..335
score: 1.3E-9coord: 512..545
score: 7.1E-10coord: 165..193
score: 3.7E-4coord: 231..264
score: 3.8E-9coord: 443..470
score: 9.1E-5coord: 548..581
score: 2.5E-4coord: 478..511
score: 1.0E-9coord: 407..439
score: 3.3E-9coord: 338..370
score: 3.
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 299..333
score: 12.419coord: 545..579
score: 10.457coord: 510..544
score: 13.471coord: 229..263
score: 13.417coord: 405..439
score: 13.252coord: 369..404
score: 10.326coord: 334..368
score: 10.797coord: 440..470
score: 8.265coord: 123..157
score: 8.703coord: 580..614
score: 13.132coord: 264..298
score: 10.457coord: 158..192
score: 7.377coord: 193..227
score: 8.418coord: 475..509
score: 12
IPR011990Tetratricopeptide-like helical domainGENE3DG3DSA:1.25.40.10coord: 192..348
score: 1.1E-5coord: 349..365
score: 8.2E-11coord: 399..400
score: 8.2E-11coord: 443..605
score: 8.2
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 8..384
score: 7.9E-259coord: 404..631
score: 7.9E
NoneNo IPR availableunknownSSF81901HCP-likecoord: 339..534
score: 2.25E-7coord: 170..324
score: 3.1

The following gene(s) are paralogous to this gene:

None