Carg06487 (gene) Silver-seed gourd

Overview
NameCarg06487
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionPentatricopeptide repeat-containing protein
LocationCucurbita_argyrosperma_scaffold_051 : 794066 .. 796179 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAAATATTGTCGCCAGTTTTCCCTTCCCTTCTTCCTCAATCGCCGTAATTTATCTGTGTTTGATTCTGTGCTTGTTGATTCTCCCCAATGGCAATGTTCTAAATATGAATTTCGCAGCATTCTCTTCGAAGCGGTCCATCTCTTCTCTGCCCTATCTCTCTGCGAGAATAAAGCAAACAGGTTAGCTTCATTTTCATCTGCTTCAATGGTGACTCACAAAAGTCCGTAATAGCTTCGAAGAATTCCTTTGTTTCACATTCATAAATGCAAATTTTGATTCAGTTAGTGTTTATGTTTTGCTTCTTATGTAGAAAATGAAATTGTCGAAATGTTTCGAGTGCCTAGTCCAAGGCCGGAAGCTTCCAACTTCCCTATCAATCGGAAGGTGCTGCGGAAGGATCCTTCTGTTCGAACTCTTGACGAGCGGTTCATAAGGATTTTGAAAATTTTCAAGTGGGGATCTGATGCAGAGAAGGCGATAGAAGTGCTGAAGCTCAAAGTTGATCACAGGTTAGTTCGCCAAGTCTTGCAAATTGATGTAGAAATTAGGGTTAAGATTCAGTTCTTCAAATGGGCTGGAAAGAGAAAGAACTTCCAGCATGATTCCACTACATATATGGCTTTAATTCATTGTTTAGAGGAATCTGGTCTTGTTGGTGAAATGTGGAGGACAATCCAAGACATGGTTCGTAGTCCATGTCCTGTGAGTCCAGCTGAATTGTCTGAAATTATTAAGATTTTAGGGAAGGCAAAAATGGTAAACAAGGCTTTGTCTGTGTTTTACCAGATTAAAGGTCGCAAATGTAAGCCAACAGCAACCATTTACAATACCTTGATCTTGATGCTTATGCAAGAAGGTCACCATGAAAAGATTCATGAGCTCTACAATGAGATATGCAGTGAGGGTAATTGCTCCCCCGATACAATCACCTACACTGCTCTTATCTCTGCGTTTGGAAAGCTAGAGCGTTATGATTTTGCGTTTCGATTGTTCGATGAAATGAAGGAGAATGGCTTATATCCAACTGCAAAGATTTATACTACCATATTGGGAATGTATTTTAAGTTGAATAAGGTTGAGGCAGCTTTGGGTTTGGTTGAGGAGATGAAGGGAAAGGGCTGTGCTCCTACTGTCTTCACTTACACTGAATTAATAAAGGGGCTTGGGAAAGTTGGAAGGGTAGATGATGCCTATAGTTTGTTTTTGAATATGTCGAAGGACGGTTGCAAGCCCGATGTCGTACTTATAAACAATTTGATCAATATATTGGGCAGGGCGGGTCGTTTGGATGATGCTCTAAATCTTTTTGGTAAAATGGATTCTTTGCAATGTGCACCCAATGTGGTCACTTACAACACTGTAATAAAGGCGATCTTTGAATCGAAAGCTCCAGCTTCTGAGGCTGCTTTGTGGTTTGAAAAGATGAAGGCGAATGGCGTTGCTCCGAGCTCGTTCACGTATGCAATTCTTATTGATGGTTACTGCAAGACAAATAGAGTTGAGAAAGCTTTAATGCTTCTTGAAGAAATGGATGAAAAGGGGTTTCCTCCATGTCCAGCTGCTTACTGCAGCCTGATCAACAGTCTTGGACAGGCGAAGCGATACGAAGCTGCAAATGAGCTATTTCAAGAATTGAAAGAGAATTGTGGACGCTCTAGTGCTCGGGTATACGCTGTGATGATAAAACACTTCGGCAAGTGTGGACGTCTAAGTGATGCTGTTGATCTTTTCAATGAAATGAAAAAACTTGGATGCAGCCCTGATGTTTATACTTATAATGCACTCATGTCAGGGATGGTTAGGGCTGGAATGATCGACGAGGCGCTTTCCTTGATGAGAAACATGGGCGAAAATGGTTGCACGCCAGACATAAACTCGCACAACATTATACTAAATGGCTTAGCTAGGACGGGTGGCCCAAAGCGAGCCATCGAAATGTTTACAAAGATGAAACATTCGAAGATCATGCCAGATGCAGTTTCGTATAATACCGTACTCAGTTGTCTGAGTCGAGCTGGTATGTTCGAGGAGGCTGCAAAGCTAATGAGAGAGATGAAGTCGAAAGGATTCGAGTATGATCCCATCACTTACTCGTCGATCCTCGAAGCAGTA

mRNA sequence

AAAAATATTGTCGCCAGTTTTCCCTTCCCTTCTTCCTCAATCGCCGTAATTTATCTGTGTTTGATTCTGTGCTTGTTGATTCTCCCCAATGGCAATGTTCTAAATATGAATTTCGCAGCATTCTCTTCGAAGCGGTCCATCTCTTCTCTGCCCTATCTCTCTGCGAGAATAAAGCAAACAGAAAATGAAATTGTCGAAATGTTTCGAGTGCCTAGTCCAAGGCCGGAAGCTTCCAACTTCCCTATCAATCGGAAGGTGCTGCGGAAGGATCCTTCTGTTCGAACTCTTGACGAGCGGTTCATAAGGATTTTGAAAATTTTCAAGTGGGGATCTGATGCAGAGAAGGCGATAGAAGTGCTGAAGCTCAAAGTTGATCACAGGTTAGTTCGCCAAGTCTTGCAAATTGATGTAGAAATTAGGGTTAAGATTCAGTTCTTCAAATGGGCTGGAAAGAGAAAGAACTTCCAGCATGATTCCACTACATATATGGCTTTAATTCATTGTTTAGAGGAATCTGGTCTTGTTGGTGAAATGTGGAGGACAATCCAAGACATGGTTCGTAGTCCATGTCCTGTGAGTCCAGCTGAATTGTCTGAAATTATTAAGATTTTAGGGAAGGCAAAAATGGTAAACAAGGCTTTGTCTGTGTTTTACCAGATTAAAGGTCGCAAATGTAAGCCAACAGCAACCATTTACAATACCTTGATCTTGATGCTTATGCAAGAAGGTCACCATGAAAAGATTCATGAGCTCTACAATGAGATATGCAGTGAGGGTAATTGCTCCCCCGATACAATCACCTACACTGCTCTTATCTCTGCGTTTGGAAAGCTAGAGCGTTATGATTTTGCGTTTCGATTGTTCGATGAAATGAAGGAGAATGGCTTATATCCAACTGCAAAGATTTATACTACCATATTGGGAATGTATTTTAAGTTGAATAAGGTTGAGGCAGCTTTGGGTTTGGTTGAGGAGATGAAGGGAAAGGGCTGTGCTCCTACTGTCTTCACTTACACTGAATTAATAAAGGGGCTTGGGAAAGTTGGAAGGGTAGATGATGCCTATAGTTTGTTTTTGAATATGTCGAAGGACGGTTGCAAGCCCGATGTCGTACTTATAAACAATTTGATCAATATATTGGGCAGGGCGGGTCGTTTGGATGATGCTCTAAATCTTTTTGGTAAAATGGATTCTTTGCAATGTGCACCCAATGTGGTCACTTACAACACTGTAATAAAGGCGATCTTTGAATCGAAAGCTCCAGCTTCTGAGGCTGCTTTGTGGTTTGAAAAGATGAAGGCGAATGGCGTTGCTCCGAGCTCGTTCACGTATGCAATTCTTATTGATGGTTACTGCAAGACAAATAGAGTTGAGAAAGCTTTAATGCTTCTTGAAGAAATGGATGAAAAGGGGTTTCCTCCATGTCCAGCTGCTTACTGCAGCCTGATCAACAGTCTTGGACAGGCGAAGCGATACGAAGCTGCAAATGAGCTATTTCAAGAATTGAAAGAGAATTGTGGACGCTCTAGTGCTCGGGTATACGCTGTGATGATAAAACACTTCGGCAAGTGTGGACGTCTAAGTGATGCTGTTGATCTTTTCAATGAAATGAAAAAACTTGGATGCAGCCCTGATGTTTATACTTATAATGCACTCATGTCAGGGATGGTTAGGGCTGGAATGATCGACGAGGCGCTTTCCTTGATGAGAAACATGGGCGAAAATGGTTGCACGCCAGACATAAACTCGCACAACATTATACTAAATGGCTTAGCTAGGACGGGTGGCCCAAAGCGAGCCATCGAAATGTTTACAAAGATGAAACATTCGAAGATCATGCCAGATGCAGTTTCGTATAATACCGTACTCAGTTGTCTGAGTCGAGCTGGTATGTTCGAGGAGGCTGCAAAGCTAATGAGAGAGATGAAGTCGAAAGGATTCGAGTATGATCCCATCACTTACTCGTCGATCCTCGAAGCAGTA

Coding sequence (CDS)

AAAAATATTGTCGCCAGTTTTCCCTTCCCTTCTTCCTCAATCGCCGTAATTTATCTGTGTTTGATTCTGTGCTTGTTGATTCTCCCCAATGGCAATGTTCTAAATATGAATTTCGCAGCATTCTCTTCGAAGCGGTCCATCTCTTCTCTGCCCTATCTCTCTGCGAGAATAAAGCAAACAGAAAATGAAATTGTCGAAATGTTTCGAGTGCCTAGTCCAAGGCCGGAAGCTTCCAACTTCCCTATCAATCGGAAGGTGCTGCGGAAGGATCCTTCTGTTCGAACTCTTGACGAGCGGTTCATAAGGATTTTGAAAATTTTCAAGTGGGGATCTGATGCAGAGAAGGCGATAGAAGTGCTGAAGCTCAAAGTTGATCACAGGTTAGTTCGCCAAGTCTTGCAAATTGATGTAGAAATTAGGGTTAAGATTCAGTTCTTCAAATGGGCTGGAAAGAGAAAGAACTTCCAGCATGATTCCACTACATATATGGCTTTAATTCATTGTTTAGAGGAATCTGGTCTTGTTGGTGAAATGTGGAGGACAATCCAAGACATGGTTCGTAGTCCATGTCCTGTGAGTCCAGCTGAATTGTCTGAAATTATTAAGATTTTAGGGAAGGCAAAAATGGTAAACAAGGCTTTGTCTGTGTTTTACCAGATTAAAGGTCGCAAATGTAAGCCAACAGCAACCATTTACAATACCTTGATCTTGATGCTTATGCAAGAAGGTCACCATGAAAAGATTCATGAGCTCTACAATGAGATATGCAGTGAGGGTAATTGCTCCCCCGATACAATCACCTACACTGCTCTTATCTCTGCGTTTGGAAAGCTAGAGCGTTATGATTTTGCGTTTCGATTGTTCGATGAAATGAAGGAGAATGGCTTATATCCAACTGCAAAGATTTATACTACCATATTGGGAATGTATTTTAAGTTGAATAAGGTTGAGGCAGCTTTGGGTTTGGTTGAGGAGATGAAGGGAAAGGGCTGTGCTCCTACTGTCTTCACTTACACTGAATTAATAAAGGGGCTTGGGAAAGTTGGAAGGGTAGATGATGCCTATAGTTTGTTTTTGAATATGTCGAAGGACGGTTGCAAGCCCGATGTCGTACTTATAAACAATTTGATCAATATATTGGGCAGGGCGGGTCGTTTGGATGATGCTCTAAATCTTTTTGGTAAAATGGATTCTTTGCAATGTGCACCCAATGTGGTCACTTACAACACTGTAATAAAGGCGATCTTTGAATCGAAAGCTCCAGCTTCTGAGGCTGCTTTGTGGTTTGAAAAGATGAAGGCGAATGGCGTTGCTCCGAGCTCGTTCACGTATGCAATTCTTATTGATGGTTACTGCAAGACAAATAGAGTTGAGAAAGCTTTAATGCTTCTTGAAGAAATGGATGAAAAGGGGTTTCCTCCATGTCCAGCTGCTTACTGCAGCCTGATCAACAGTCTTGGACAGGCGAAGCGATACGAAGCTGCAAATGAGCTATTTCAAGAATTGAAAGAGAATTGTGGACGCTCTAGTGCTCGGGTATACGCTGTGATGATAAAACACTTCGGCAAGTGTGGACGTCTAAGTGATGCTGTTGATCTTTTCAATGAAATGAAAAAACTTGGATGCAGCCCTGATGTTTATACTTATAATGCACTCATGTCAGGGATGGTTAGGGCTGGAATGATCGACGAGGCGCTTTCCTTGATGAGAAACATGGGCGAAAATGGTTGCACGCCAGACATAAACTCGCACAACATTATACTAAATGGCTTAGCTAGGACGGGTGGCCCAAAGCGAGCCATCGAAATGTTTACAAAGATGAAACATTCGAAGATCATGCCAGATGCAGTTTCGTATAATACCGTACTCAGTTGTCTGAGTCGAGCTGGTATGTTCGAGGAGGCTGCAAAGCTAATGAGAGAGATGAAGTCGAAAGGATTCGAGTATGATCCCATCACTTACTCGTCGATCCTCGAAGCAGTA

Protein sequence

KNIVASFPFPSSSIAVIYLCLILCLLILPNGNVLNMNFAAFSSKRSISSLPYLSARIKQTENEIVEMFRVPSPRPEASNFPINRKVLRKDPSVRTLDERFIRILKIFKWGSDAEKAIEVLKLKVDHRLVRQVLQIDVEIRVKIQFFKWAGKRKNFQHDSTTYMALIHCLEESGLVGEMWRTIQDMVRSPCPVSPAELSEIIKILGKAKMVNKALSVFYQIKGRKCKPTATIYNTLILMLMQEGHHEKIHELYNEICSEGNCSPDTITYTALISAFGKLERYDFAFRLFDEMKENGLYPTAKIYTTILGMYFKLNKVEAALGLVEEMKGKGCAPTVFTYTELIKGLGKVGRVDDAYSLFLNMSKDGCKPDVVLINNLINILGRAGRLDDALNLFGKMDSLQCAPNVVTYNTVIKAIFESKAPASEAALWFEKMKANGVAPSSFTYAILIDGYCKTNRVEKALMLLEEMDEKGFPPCPAAYCSLINSLGQAKRYEAANELFQELKENCGRSSARVYAVMIKHFGKCGRLSDAVDLFNEMKKLGCSPDVYTYNALMSGMVRAGMIDEALSLMRNMGENGCTPDINSHNIILNGLARTGGPKRAIEMFTKMKHSKIMPDAVSYNTVLSCLSRAGMFEEAAKLMREMKSKGFEYDPITYSSILEAV
Homology
[Close]
BLAST of Carg06487 vs. NCBI nr
Match: XP_022955569.1 (pentatricopeptide repeat-containing protein At3g16010 [Cucurbita moschata])

HSP 1 Score: 548.5 bits (1412), Expect = 3.1e-152
Identity = 420/422 (99.53%), Postives = 421/422 (99.76%), Query Frame = 0 

Query: 36  MNFAAFSSKRSISSLPYLSARIKQTENEIVEMFRVPSPRPEASNFPINRKVLRKDPSVRT 95
           MNFAAFSSKRSISSLPYLSARIKQTENEIVEMFRVPSPRPEASNFPINRKVLRKDPSVRT
Sbjct: 1   MNFAAFSSKRSISSLPYLSARIKQTENEIVEMFRVPSPRPEASNFPINRKVLRKDPSVRT 60

Query: 96  LDERFIRILKIFKWGSDAEKAIEVLKLKVDHRLVRQVLQIDVEIRVKIQFFKWAGKRKNF 155
           LDERFIRILKIFKWGSDAEKAIEVLKLKVDHRLVRQVLQIDVEIRVKIQFFKWAGKRKNF
Sbjct: 61  LDERFIRILKIFKWGSDAEKAIEVLKLKVDHRLVRQVLQIDVEIRVKIQFFKWAGKRKNF 120

Query: 156 QHDSTTYMALIHCLEESGLVGEMWRTIQDMVRSPCPVSPAELSEIIKILGKAKMVNKALS 215
           QHDSTTYMALIHCLEESGLVGEMWRTIQDMVRSPCPVSPAELSEIIKILGKAKMVNKALS
Sbjct: 121 QHDSTTYMALIHCLEESGLVGEMWRTIQDMVRSPCPVSPAELSEIIKILGKAKMVNKALS 180

Query: 216 VFYQIKGRKCKPTATIYNTLILMLMQEGHHEKIHELYNEICSEGNCSPDTITYTALISAF 275
           VFYQIKGRKCKPTAT YNTLILMLMQEGHHEKIHELYNEICSEGNCSPDTITYTALISAF
Sbjct: 181 VFYQIKGRKCKPTATTYNTLILMLMQEGHHEKIHELYNEICSEGNCSPDTITYTALISAF 240

Query: 276 GKLERYDFAFRLFDEMKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 335
           GKLERYDFAFRLFDEMKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 GKLERYDFAFRLFDEMKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 336 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 395
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 396 XXXXXXXXXXXXXXXXXXXXFESKAPASEAALWFEKMKANGVAPSSFTYAILIDGYCKTN 455
           XXXXXXXXXXXXXXXXXXXXFESKAPASEAALWFEKMKANGVAPSSFTYAILIDG+CKTN
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXFESKAPASEAALWFEKMKANGVAPSSFTYAILIDGFCKTN 420

Query: 456 RV 458
           RV
Sbjct: 421 RV 422

[Close]
BLAST of Carg06487 vs. NCBI nr
Match: XP_023528001.1 (pentatricopeptide repeat-containing protein At3g16010 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 547.0 bits (1408), Expect = 9.0e-152
Identity = 419/422 (99.29%), Postives = 420/422 (99.53%), Query Frame = 0 

Query: 36  MNFAAFSSKRSISSLPYLSARIKQTENEIVEMFRVPSPRPEASNFPINRKVLRKDPSVRT 95
           MNFAAFSSKRSISSLPYLSARIKQTENEIVEMFRVPSPRPEASNFPINRKVLRKDPSVRT
Sbjct: 1   MNFAAFSSKRSISSLPYLSARIKQTENEIVEMFRVPSPRPEASNFPINRKVLRKDPSVRT 60

Query: 96  LDERFIRILKIFKWGSDAEKAIEVLKLKVDHRLVRQVLQIDVEIRVKIQFFKWAGKRKNF 155
           LDERFIRILKIFKWGSDAEKAIEVLKLKVDHRLVRQVLQIDVEIRVKIQFFKWAGKRKNF
Sbjct: 61  LDERFIRILKIFKWGSDAEKAIEVLKLKVDHRLVRQVLQIDVEIRVKIQFFKWAGKRKNF 120

Query: 156 QHDSTTYMALIHCLEESGLVGEMWRTIQDMVRSPCPVSPAELSEIIKILGKAKMVNKALS 215
           QHDSTTYMALIHCLEESGLVGEMWRTIQDMVRSPCPVSPAELSEIIKILGKAKMVNKALS
Sbjct: 121 QHDSTTYMALIHCLEESGLVGEMWRTIQDMVRSPCPVSPAELSEIIKILGKAKMVNKALS 180

Query: 216 VFYQIKGRKCKPTATIYNTLILMLMQEGHHEKIHELYNEICSEGNCSPDTITYTALISAF 275
           VFYQIKGRKCKPTAT YNTLILMLMQEGHHEKIHELYNEICSEGNCSPDTITYTALISAF
Sbjct: 181 VFYQIKGRKCKPTATTYNTLILMLMQEGHHEKIHELYNEICSEGNCSPDTITYTALISAF 240

Query: 276 GKLERYDFAFRLFDEMKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 335
           GKLERYDFAFRLFDEMKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 GKLERYDFAFRLFDEMKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 336 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 395
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 396 XXXXXXXXXXXXXXXXXXXXFESKAPASEAALWFEKMKANGVAPSSFTYAILIDGYCKTN 455
           XXXXXXXXXXXXXXXXXXXXFESKAPASEAALWFEKMK NGVAPSSFTYAILIDG+CKTN
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXFESKAPASEAALWFEKMKTNGVAPSSFTYAILIDGFCKTN 420

Query: 456 RV 458
           RV
Sbjct: 421 RV 422

[Close]
BLAST of Carg06487 vs. NCBI nr
Match: XP_022980859.1 (pentatricopeptide repeat-containing protein At3g16010 [Cucurbita maxima])

HSP 1 Score: 543.1 bits (1398), Expect = 1.3e-150
Identity = 414/422 (98.10%), Postives = 418/422 (99.05%), Query Frame = 0 

Query: 36  MNFAAFSSKRSISSLPYLSARIKQTENEIVEMFRVPSPRPEASNFPINRKVLRKDPSVRT 95
           MNFAAFSSKRSISSLPYLSARIKQTENEIVEMFRVPSPRPEASNFPINRKVLRKDPSVRT
Sbjct: 1   MNFAAFSSKRSISSLPYLSARIKQTENEIVEMFRVPSPRPEASNFPINRKVLRKDPSVRT 60

Query: 96  LDERFIRILKIFKWGSDAEKAIEVLKLKVDHRLVRQVLQIDVEIRVKIQFFKWAGKRKNF 155
           LDERFIRILKIFKWGSDAEKAIEVLKLKVDHRLVRQVLQIDVEIRVKIQFFKWAGKRKNF
Sbjct: 61  LDERFIRILKIFKWGSDAEKAIEVLKLKVDHRLVRQVLQIDVEIRVKIQFFKWAGKRKNF 120

Query: 156 QHDSTTYMALIHCLEESGLVGEMWRTIQDMVRSPCPVSPAELSEIIKILGKAKMVNKALS 215
           QHDSTTYMALIHCLEESGLVGEMWRTIQDMVRSPCPVSP ELSEIIKILGKAKMVNKALS
Sbjct: 121 QHDSTTYMALIHCLEESGLVGEMWRTIQDMVRSPCPVSPPELSEIIKILGKAKMVNKALS 180

Query: 216 VFYQIKGRKCKPTATIYNTLILMLMQEGHHEKIHELYNEICSEGNCSPDTITYTALISAF 275
           VFYQIKGRKCKPTAT YNTLILMLMQEGHHEK+HELYNEIC+EGNCSPDTITYTALISAF
Sbjct: 181 VFYQIKGRKCKPTATTYNTLILMLMQEGHHEKVHELYNEICNEGNCSPDTITYTALISAF 240

Query: 276 GKLERYDFAFRLFDEMKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 335
           GKLERYDFAFRLFDEMKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 GKLERYDFAFRLFDEMKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 336 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 395
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 396 XXXXXXXXXXXXXXXXXXXXFESKAPASEAALWFEKMKANGVAPSSFTYAILIDGYCKTN 455
           XXXXXXXXXXXXXXXXXXX FESKAPASEAALWFEKMK NG+APSSFTYAILIDG+CKTN
Sbjct: 361 XXXXXXXXXXXXXXXXXXXIFESKAPASEAALWFEKMKTNGIAPSSFTYAILIDGFCKTN 420

Query: 456 RV 458
           RV
Sbjct: 421 RV 422

[Close]
BLAST of Carg06487 vs. NCBI nr
Match: XP_022153666.1 (pentatricopeptide repeat-containing protein At3g16010 [Momordica charantia])

HSP 1 Score: 506.1 bits (1302), Expect = 1.8e-139
Identity = 393/421 (93.35%), Postives = 411/421 (97.62%), Query Frame = 0 

Query: 36  MNFAAFSSKRSISSLPYLSARIKQTENEIVEMFRVPSPRPEASNFPINRKVLRKDPSVRT 95
           MNFA+ +SKR+ISSLP LSARIKQTENEIV+MFRVPSPR EASNFPINR+V R+DPSVRT
Sbjct: 1   MNFASLASKRTISSLPCLSARIKQTENEIVQMFRVPSPRDEASNFPINRRVSRRDPSVRT 60

Query: 96  LDERFIRILKIFKWGSDAEKAIEVLKLKVDHRLVRQVLQIDVEIRVKIQFFKWAGKRKNF 155
           LDERF RILK+FKWGSDAEKAIEVLKLKVDHRLVRQVLQIDVEIRVKIQFFKWAGKR+NF
Sbjct: 61  LDERFTRILKVFKWGSDAEKAIEVLKLKVDHRLVRQVLQIDVEIRVKIQFFKWAGKRRNF 120

Query: 156 QHDSTTYMALIHCLEESGLVGEMWRTIQDMVRSPCPVSPAELSEIIKILGKAKMVNKALS 215
           +HDSTTYMALI CLEESGLVGEMW+TIQDMVRSPC + PAELSEI++ILGKAKMVNKALS
Sbjct: 121 EHDSTTYMALIRCLEESGLVGEMWKTIQDMVRSPCSIDPAELSEILRILGKAKMVNKALS 180

Query: 216 VFYQIKGRKCKPTATIYNTLILMLMQEGHHEKIHELYNEICSEGNCSPDTITYTALISAF 275
           VFYQIKGRKCKPTA  +NTLILMLMQEGHHEKIHELYNEICSEGNC+PDTITY+ALISAF
Sbjct: 181 VFYQIKGRKCKPTAATHNTLILMLMQEGHHEKIHELYNEICSEGNCTPDTITYSALISAF 240

Query: 276 GKLERYDFAFRLFDEMKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 335
           GKLERYDFAFRLFDEMKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 GKLERYDFAFRLFDEMKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 336 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 395
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 396 XXXXXXXXXXXXXXXXXXXXFESKAPASEAALWFEKMKANGVAPSSFTYAILIDGYCKTN 455
           XXXXXXXXXXXXXXXXXXXXFESKAPASEAALWFEKMKANG+APSSFTYAILIDG+CKTN
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXFESKAPASEAALWFEKMKANGIAPSSFTYAILIDGFCKTN 420

Query: 456 R 457
           R
Sbjct: 421 R 421

[Close]
BLAST of Carg06487 vs. NCBI nr
Match: XP_008447498.1 (PREDICTED: pentatricopeptide repeat-containing protein At3g16010 [Cucumis melo])

HSP 1 Score: 500.4 bits (1287), Expect = 9.6e-138
Identity = 394/422 (93.36%), Postives = 406/422 (96.21%), Query Frame = 0 

Query: 36  MNFAAFSSKRSISSLPYLSARIKQTENEIVEMFRVPSPRPEASNFPINRKVLRKDPSVRT 95
           MNF + +SKR ISSL  L+ARIKQTENEIVEMFRVPSPRPEASNFP NRKVLR+DPSVRT
Sbjct: 1   MNFTSLASKRCISSLAPLAARIKQTENEIVEMFRVPSPRPEASNFPFNRKVLRRDPSVRT 60

Query: 96  LDERFIRILKIFKWGSDAEKAIEVLKLKVDHRLVRQVLQIDVEIRVKIQFFKWAGKRKNF 155
           LDERFIRILKIFKWGSDAEKAIEVLKLKVDHRLVRQVL+IDVEIRVKIQFFKWAGKRKNF
Sbjct: 61  LDERFIRILKIFKWGSDAEKAIEVLKLKVDHRLVRQVLEIDVEIRVKIQFFKWAGKRKNF 120

Query: 156 QHDSTTYMALIHCLEESGLVGEMWRTIQDMVRSPCPVSPAELSEIIKILGKAKMVNKALS 215
            HDSTTYMALI CLEESGLVGEMW TIQDM+RSPC V PAE SEI+KILGKAKMVNKALS
Sbjct: 121 HHDSTTYMALIRCLEESGLVGEMWGTIQDMIRSPCSVGPAEWSEILKILGKAKMVNKALS 180

Query: 216 VFYQIKGRKCKPTATIYNTLILMLMQEGHHEKIHELYNEICSEGNCSPDTITYTALISAF 275
           VFYQIK  KC PTAT+YNTLILMLMQEGHHEKIHE+YNEICSEGNC PDTITY+ALISAF
Sbjct: 181 VFYQIKRHKCNPTATVYNTLILMLMQEGHHEKIHEVYNEICSEGNCFPDTITYSALISAF 240

Query: 276 GKLERYDFAFRLFDEMKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 335
           GKLERYDFAFRLFDEMKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 GKLERYDFAFRLFDEMKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 336 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 395
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 396 XXXXXXXXXXXXXXXXXXXXFESKAPASEAALWFEKMKANGVAPSSFTYAILIDGYCKTN 455
           XXXXXXXXXXXXXXXXXXXXFESKAPASEAALWFEKMKA+GVAPSSFTYAILIDG+CKTN
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXFESKAPASEAALWFEKMKADGVAPSSFTYAILIDGFCKTN 420

Query: 456 RV 458
           RV
Sbjct: 421 RV 422

[Close]
BLAST of Carg06487 vs. TAIR10
Match: AT3G16010.1 (Pentatricopeptide repeat (PPR-like) superfamily protein)

HSP 1 Score: 377.5 bits (968), Expect = 1.7e-104
Identity = 330/419 (78.76%), Postives = 368/419 (87.83%), Query Frame = 0 

Query: 42  SSKRSISSLPYLSARIKQTENEIVEMFRVPSPRPEASNFPINR-KVLRKDPSVRTLDERF 101
           S+KRSISSLP+LS R KQTENEIV+MF VP+   E S  P  + K+ RKDPSVR LDERF
Sbjct: 10  SAKRSISSLPHLSQRFKQTENEIVQMFSVPN--HEESEKPQEKWKLSRKDPSVRMLDERF 69

Query: 102 IRILKIFKWGSDAEKAIEVLKLKVDHRLVRQVLQIDVEIRVKIQFFKWAGKRKNFQHDST 161
           IRI+KIFKWG DAEKA+EVLKLKVDHRLVR +L+IDVEI VKIQFFKWAGKR+NFQHD +
Sbjct: 70  IRIVKIFKWGPDAEKALEVLKLKVDHRLVRSILEIDVEINVKIQFFKWAGKRRNFQHDCS 129

Query: 162 TYMALIHCLEESGLVGEMWRTIQDMVRSP-CPVSPAELSEIIKILGKAKMVNKALSVFYQ 221
           TYM LI CLEE+ L GEM+RTIQ++VR+    VSPA LSE++K LG+AKMV+KALSVFYQ
Sbjct: 130 TYMTLIRCLEEARLYGEMYRTIQEVVRNTYVSVSPAVLSELVKALGRAKMVSKALSVFYQ 189

Query: 222 IKGRKCKPTATIYNTLILMLMQEGHHEKIHELYNEICSEGNCSPDTITYTALISAFGKLE 281
            KGRKCKPT++ YN++ILMLMQEG HEK+HE+Y E+C+EG+C PDTITY+ALIS++ KL 
Sbjct: 190 AKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLG 249

Query: 282 RYDFAFRLFDEMKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 341
           R D A RLFDEMK      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 250 RNDSAIRLFDEMKDNCMQPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 309

Query: 342 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 401
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 310 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 369

Query: 402 XXXXXXXXXXXXXXXXFESKAPASEAALWFEKMKANGVAPSSFTYAILIDGYCKTNRVE 459
           XXXXXXXXXXXXXXX FESKA  SE + WF+KMKA+ V+PS FTY+ILIDGYCKTNRVE
Sbjct: 370 XXXXXXXXXXXXXXXLFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVE 426

[Close]
BLAST of Carg06487 vs. TAIR10
Match: AT2G30780.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 58.2 bits (139), Expect = 2.3e-08
Identity = 30/102 (29.41%), Postives = 59/102 (57.84%), Query Frame = 0 

Query: 191 PVSPAELSEIIKILGKAKMVNKALSVFYQIKGRKCKPTATIYNTLILMLMQEGHHEKIHE 250
           P++  E ++ IKI G+A+ +N A+ +F +   +K   TA++YN+L+ + M  G  E+   
Sbjct: 101 PLTSEEYAKGIKIAGRARDINLAVYLFDE-AAKKRMQTASVYNSLMSVYMWNGLAEECQS 160

Query: 251 LYNEICSEGNCSPDTITYTALISAFGKLERYDFAFRLFDEMK 293
           L+ +   + +C+P  +TY  L+S +G+L         F+E++
Sbjct: 161 LFKDFRRQTHCAPTVVTYNILVSVYGRLLMVKNMEAAFEELQ 201

[Close]
BLAST of Carg06487 vs. TAIR10
Match: AT1G53330.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 56.2 bits (134), Expect = 8.7e-08
Identity = 38/142 (26.76%), Postives = 71/142 (50.00%), Query Frame = 0 

Query: 152 RKNFQHDSTTYMALIHCLEESGLVGEMWRTIQDMVRSPCPVSPAEL--SEIIKILGKAKM 211
           ++ F++    Y  +I  L  S +  E+ + +  + ++   + P E+    +I   G+ K+
Sbjct: 40  KRPFRYSLLCYDIIITKLGGSKMFDELDQVLLHL-KTDTRIVPTEIIFCNVINFFGRGKL 99

Query: 212 VNKALSVFYQIKGRKCKPTATIYNTLILMLMQEGHHEKIHELYNEICSEGNCSPDTITYT 271
            ++AL +F ++   +C+ T    N+L+  L++ G  EK+ E  + I   G   PD  TY 
Sbjct: 100 PSRALHMFDEMPQYRCQRTVKSLNSLLSALLKCGELEKMKERLSSIDEFG--KPDACTYN 159

Query: 272 ALISAFGKLERYDFAFRLFDEM 292
            LI    +   +D A +LFDEM
Sbjct: 160 ILIHGCSQSGCFDDALKLFDEM 178

[Close]
BLAST of Carg06487 vs. TAIR10
Match: AT1G77405.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 55.5 bits (132), Expect = 1.5e-07
Identity = 31/125 (24.80%), Postives = 62/125 (49.60%), Query Frame = 0 

Query: 134 QIDVEIRVKIQFFKWAGKRKNFQHDSTTYMALIHCLEESGLVGEMWRTIQDMVR---SPC 193
           ++ + ++  ++FF W      F H+  T   +   L +      +W  ++ + R      
Sbjct: 102 KVSIGLQKALEFFFWIETHFGFDHNEITCRDMACLLAKGNDFKGLWDFLRQVSRRENGKN 161

Query: 194 PVSPAELSEIIKILGKAKMVNKALSVFYQIKGRKCKPTATIYNTLILMLMQEGHHEKIHE 253
            V+ A ++ ++K LG+   V +AL+ FY++K   CKP    YNT+I  L + G+ +K   
Sbjct: 162 VVTTASITCLMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARF 221

Query: 254 LYNEI 256
           L +++
Sbjct: 222 LLDQM 226

[Close]
BLAST of Carg06487 vs. TAIR10
Match: AT1G18900.3 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 55.5 bits (132), Expect = 1.5e-07
Identity = 28/93 (30.11%), Postives = 49/93 (52.69%), Query Frame = 0 

Query: 98  ERFIRILKIFKWGSDAEKAIEVLKLKVDHRLVRQVLQIDVEIRVKIQFFKWAGKRKNFQH 157
           E    +L+ F+WG  AE+A++ L L++D     QVL+   +    + FF W  ++  F+H
Sbjct: 303 ENVSSVLRRFRWGPAAEEALQNLGLRIDAYQANQVLKQMNDYGNALGFFYWLKRQPGFKH 362

Query: 158 DSTTYMALIHCLEESGLVGEMWRTIQDMVRSPC 191
           D  TY  ++  L  +   G + + + +MVR  C
Sbjct: 363 DGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGC 395

[Close]
BLAST of Carg06487 vs. Swiss-Prot
Match: sp|Q9LW84|PP236_ARATH (Pentatricopeptide repeat-containing protein At3g16010 OS=Arabidopsis thaliana OX=3702 GN=At3g16010 PE=2 SV=1)

HSP 1 Score: 377.5 bits (968), Expect = 3.1e-103
Identity = 330/419 (78.76%), Postives = 368/419 (87.83%), Query Frame = 0 

Query: 42  SSKRSISSLPYLSARIKQTENEIVEMFRVPSPRPEASNFPINR-KVLRKDPSVRTLDERF 101
           S+KRSISSLP+LS R KQTENEIV+MF VP+   E S  P  + K+ RKDPSVR LDERF
Sbjct: 10  SAKRSISSLPHLSQRFKQTENEIVQMFSVPN--HEESEKPQEKWKLSRKDPSVRMLDERF 69

Query: 102 IRILKIFKWGSDAEKAIEVLKLKVDHRLVRQVLQIDVEIRVKIQFFKWAGKRKNFQHDST 161
           IRI+KIFKWG DAEKA+EVLKLKVDHRLVR +L+IDVEI VKIQFFKWAGKR+NFQHD +
Sbjct: 70  IRIVKIFKWGPDAEKALEVLKLKVDHRLVRSILEIDVEINVKIQFFKWAGKRRNFQHDCS 129

Query: 162 TYMALIHCLEESGLVGEMWRTIQDMVRSP-CPVSPAELSEIIKILGKAKMVNKALSVFYQ 221
           TYM LI CLEE+ L GEM+RTIQ++VR+    VSPA LSE++K LG+AKMV+KALSVFYQ
Sbjct: 130 TYMTLIRCLEEARLYGEMYRTIQEVVRNTYVSVSPAVLSELVKALGRAKMVSKALSVFYQ 189

Query: 222 IKGRKCKPTATIYNTLILMLMQEGHHEKIHELYNEICSEGNCSPDTITYTALISAFGKLE 281
            KGRKCKPT++ YN++ILMLMQEG HEK+HE+Y E+C+EG+C PDTITY+ALIS++ KL 
Sbjct: 190 AKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLG 249

Query: 282 RYDFAFRLFDEMKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 341
           R D A RLFDEMK      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 250 RNDSAIRLFDEMKDNCMQPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 309

Query: 342 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 401
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 310 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 369

Query: 402 XXXXXXXXXXXXXXXXFESKAPASEAALWFEKMKANGVAPSSFTYAILIDGYCKTNRVE 459
           XXXXXXXXXXXXXXX FESKA  SE + WF+KMKA+ V+PS FTY+ILIDGYCKTNRVE
Sbjct: 370 XXXXXXXXXXXXXXXLFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVE 426

[Close]
BLAST of Carg06487 vs. Swiss-Prot
Match: sp|O49343|PP177_ARATH (Pentatricopeptide repeat-containing protein At2g30780 OS=Arabidopsis thaliana OX=3702 GN=At2g30780 PE=2 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 4.1e-07
Identity = 30/102 (29.41%), Postives = 59/102 (57.84%), Query Frame = 0 

Query: 191 PVSPAELSEIIKILGKAKMVNKALSVFYQIKGRKCKPTATIYNTLILMLMQEGHHEKIHE 250
           P++  E ++ IKI G+A+ +N A+ +F +   +K   TA++YN+L+ + M  G  E+   
Sbjct: 101 PLTSEEYAKGIKIAGRARDINLAVYLFDE-AAKKRMQTASVYNSLMSVYMWNGLAEECQS 160

Query: 251 LYNEICSEGNCSPDTITYTALISAFGKLERYDFAFRLFDEMK 293
           L+ +   + +C+P  +TY  L+S +G+L         F+E++
Sbjct: 161 LFKDFRRQTHCAPTVVTYNILVSVYGRLLMVKNMEAAFEELQ 201

[Close]
BLAST of Carg06487 vs. Swiss-Prot
Match: sp|Q9MAG8|PPR79_ARATH (Putative pentatricopeptide repeat-containing protein At1g53330 OS=Arabidopsis thaliana OX=3702 GN=At1g53330 PE=3 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 1.6e-06
Identity = 38/142 (26.76%), Postives = 71/142 (50.00%), Query Frame = 0 

Query: 152 RKNFQHDSTTYMALIHCLEESGLVGEMWRTIQDMVRSPCPVSPAEL--SEIIKILGKAKM 211
           ++ F++    Y  +I  L  S +  E+ + +  + ++   + P E+    +I   G+ K+
Sbjct: 40  KRPFRYSLLCYDIIITKLGGSKMFDELDQVLLHL-KTDTRIVPTEIIFCNVINFFGRGKL 99

Query: 212 VNKALSVFYQIKGRKCKPTATIYNTLILMLMQEGHHEKIHELYNEICSEGNCSPDTITYT 271
            ++AL +F ++   +C+ T    N+L+  L++ G  EK+ E  + I   G   PD  TY 
Sbjct: 100 PSRALHMFDEMPQYRCQRTVKSLNSLLSALLKCGELEKMKERLSSIDEFG--KPDACTYN 159

Query: 272 ALISAFGKLERYDFAFRLFDEM 292
            LI    +   +D A +LFDEM
Sbjct: 160 ILIHGCSQSGCFDDALKLFDEM 178

[Close]
BLAST of Carg06487 vs. Swiss-Prot
Match: sp|Q1PFC5|PP130_ARATH (Pentatricopeptide repeat-containing protein At1g77405 OS=Arabidopsis thaliana OX=3702 GN=At1g77405 PE=2 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 2.7e-06
Identity = 31/125 (24.80%), Postives = 62/125 (49.60%), Query Frame = 0 

Query: 134 QIDVEIRVKIQFFKWAGKRKNFQHDSTTYMALIHCLEESGLVGEMWRTIQDMVR---SPC 193
           ++ + ++  ++FF W      F H+  T   +   L +      +W  ++ + R      
Sbjct: 102 KVSIGLQKALEFFFWIETHFGFDHNEITCRDMACLLAKGNDFKGLWDFLRQVSRRENGKN 161

Query: 194 PVSPAELSEIIKILGKAKMVNKALSVFYQIKGRKCKPTATIYNTLILMLMQEGHHEKIHE 253
            V+ A ++ ++K LG+   V +AL+ FY++K   CKP    YNT+I  L + G+ +K   
Sbjct: 162 VVTTASITCLMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARF 221

Query: 254 LYNEI 256
           L +++
Sbjct: 222 LLDQM 226

[Close]
BLAST of Carg06487 vs. Swiss-Prot
Match: sp|Q8GYP6|PPR49_ARATH (Pentatricopeptide repeat-containing protein At1g18900 OS=Arabidopsis thaliana OX=3702 GN=At1g18900 PE=2 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 2.7e-06
Identity = 28/93 (30.11%), Postives = 49/93 (52.69%), Query Frame = 0 

Query: 98  ERFIRILKIFKWGSDAEKAIEVLKLKVDHRLVRQVLQIDVEIRVKIQFFKWAGKRKNFQH 157
           E    +L+ F+WG  AE+A++ L L++D     QVL+   +    + FF W  ++  F+H
Sbjct: 303 ENVSSVLRRFRWGPAAEEALQNLGLRIDAYQANQVLKQMNDYGNALGFFYWLKRQPGFKH 362

Query: 158 DSTTYMALIHCLEESGLVGEMWRTIQDMVRSPC 191
           D  TY  ++  L  +   G + + + +MVR  C
Sbjct: 363 DGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGC 395

[Close]
BLAST of Carg06487 vs. TrEMBL
Match: tr|A0A1S3BH01|A0A1S3BH01_CUCME (pentatricopeptide repeat-containing protein At3g16010 OS=Cucumis melo OX=3656 GN=LOC103489930 PE=4 SV=1)

HSP 1 Score: 500.4 bits (1287), Expect = 6.4e-138
Identity = 394/422 (93.36%), Postives = 406/422 (96.21%), Query Frame = 0 

Query: 36  MNFAAFSSKRSISSLPYLSARIKQTENEIVEMFRVPSPRPEASNFPINRKVLRKDPSVRT 95
           MNF + +SKR ISSL  L+ARIKQTENEIVEMFRVPSPRPEASNFP NRKVLR+DPSVRT
Sbjct: 1   MNFTSLASKRCISSLAPLAARIKQTENEIVEMFRVPSPRPEASNFPFNRKVLRRDPSVRT 60

Query: 96  LDERFIRILKIFKWGSDAEKAIEVLKLKVDHRLVRQVLQIDVEIRVKIQFFKWAGKRKNF 155
           LDERFIRILKIFKWGSDAEKAIEVLKLKVDHRLVRQVL+IDVEIRVKIQFFKWAGKRKNF
Sbjct: 61  LDERFIRILKIFKWGSDAEKAIEVLKLKVDHRLVRQVLEIDVEIRVKIQFFKWAGKRKNF 120

Query: 156 QHDSTTYMALIHCLEESGLVGEMWRTIQDMVRSPCPVSPAELSEIIKILGKAKMVNKALS 215
            HDSTTYMALI CLEESGLVGEMW TIQDM+RSPC V PAE SEI+KILGKAKMVNKALS
Sbjct: 121 HHDSTTYMALIRCLEESGLVGEMWGTIQDMIRSPCSVGPAEWSEILKILGKAKMVNKALS 180

Query: 216 VFYQIKGRKCKPTATIYNTLILMLMQEGHHEKIHELYNEICSEGNCSPDTITYTALISAF 275
           VFYQIK  KC PTAT+YNTLILMLMQEGHHEKIHE+YNEICSEGNC PDTITY+ALISAF
Sbjct: 181 VFYQIKRHKCNPTATVYNTLILMLMQEGHHEKIHEVYNEICSEGNCFPDTITYSALISAF 240

Query: 276 GKLERYDFAFRLFDEMKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 335
           GKLERYDFAFRLFDEMKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 GKLERYDFAFRLFDEMKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 336 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 395
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 396 XXXXXXXXXXXXXXXXXXXXFESKAPASEAALWFEKMKANGVAPSSFTYAILIDGYCKTN 455
           XXXXXXXXXXXXXXXXXXXXFESKAPASEAALWFEKMKA+GVAPSSFTYAILIDG+CKTN
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXFESKAPASEAALWFEKMKADGVAPSSFTYAILIDGFCKTN 420

Query: 456 RV 458
           RV
Sbjct: 421 RV 422

[Close]
BLAST of Carg06487 vs. TrEMBL
Match: tr|A0A2P4HI96|A0A2P4HI96_QUESU (Pentatricopeptide repeat-containing protein OS=Quercus suber OX=58331 GN=CFP56_69014 PE=4 SV=1)

HSP 1 Score: 436.0 bits (1120), Expect = 1.5e-118
Identity = 352/421 (83.61%), Postives = 391/421 (92.87%), Query Frame = 0 

Query: 36  MNFAAFSSKRSISSLPYLSARIKQTENEIVEMFRVPSPRPEASNFPINRKVLRKDPSVRT 95
           M   + +SKRSIS+L +L  RIKQTENE+V+MF++ +P+ E  N P+  K+ RKDP+VRT
Sbjct: 4   MIVGSIASKRSISTLSHLCERIKQTENEVVQMFQLSTPKDEMHNLPMRGKLPRKDPAVRT 63

Query: 96  LDERFIRILKIFKWGSDAEKAIEVLKLKVDHRLVRQVLQIDVEIRVKIQFFKWAGKRKNF 155
           LDERFIRILKIFKWG DAEKA+EVLKL+VDHRLVR+VL+IDVE+ VKIQFFKWAGKR+NF
Sbjct: 64  LDERFIRILKIFKWGPDAEKALEVLKLRVDHRLVREVLKIDVEVNVKIQFFKWAGKRRNF 123

Query: 156 QHDSTTYMALIHCLEESGLVGEMWRTIQDMVRSPCPVSPAELSEIIKILGKAKMVNKALS 215
           +HDSTTYMALIHCL+E+G+ GEMW+T+Q+MVRS C + PAELSEI+K+LGKAKMVNKALS
Sbjct: 124 EHDSTTYMALIHCLDEAGINGEMWKTVQEMVRSTCILGPAELSEIVKVLGKAKMVNKALS 183

Query: 216 VFYQIKGRKCKPTATIYNTLILMLMQEGHHEKIHELYNEICSEGNCSPDTITYTALISAF 275
           VFYQIKGRKCKPTA  YNT+ILMLMQEGHHEK+HELYNE+C+EGNC PDT+TY+ALIS F
Sbjct: 184 VFYQIKGRKCKPTANTYNTMILMLMQEGHHEKVHELYNEMCNEGNCFPDTVTYSALISTF 243

Query: 276 GKLERYDFAFRLFDEMKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 335
           GKL R D A RLFDEMKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 244 GKLGREDSAIRLFDEMKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 303

Query: 336 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 395
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 304 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 363

Query: 396 XXXXXXXXXXXXXXXXXXXXFESKAPASEAALWFEKMKANGVAPSSFTYAILIDGYCKTN 455
           XXXXXXXXXXXXXXXXXXXX ESKAPASEA+LWFEKMKANG+APSSFTY+ILIDG+CKTN
Sbjct: 364 XXXXXXXXXXXXXXXXXXXXXESKAPASEASLWFEKMKANGIAPSSFTYSILIDGFCKTN 423

Query: 456 R 457
           R
Sbjct: 424 R 424

[Close]
BLAST of Carg06487 vs. TrEMBL
Match: tr|A0A067KZG9|A0A067KZG9_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_06260 PE=4 SV=1)

HSP 1 Score: 433.7 bits (1114), Expect = 7.3e-118
Identity = 354/423 (83.69%), Postives = 389/423 (91.96%), Query Frame = 0 

Query: 36  MNFAAFSSKRSISSLPYLSARIKQTENEIVEMFRVPSPRPEASNFPINRKVLRKDPSVRT 95
           M F   +SKRSIS+LP+L  RIKQTENEIV+MFR+PS   E  N P+NRK  R DPS+R 
Sbjct: 4   MVFGFIASKRSISTLPHLCERIKQTENEIVQMFRLPSRNDEMQNLPMNRKFSRNDPSIRK 63

Query: 96  LDERFIRILKIFKWGSDAEKAIEVLKLKVDHRLVRQVLQIDVEIRVKIQFFKWAGKRKNF 155
           LDERFIRILKIFKWG DAEKA+EVLKLKVDHRLVR+VL+IDVE+ VKI+FFKW  KR+NF
Sbjct: 64  LDERFIRILKIFKWGPDAEKALEVLKLKVDHRLVREVLKIDVEVHVKIKFFKWVAKRRNF 123

Query: 156 QHDSTTYMALIHCLEESGLVGEMWRTIQDMVRSPCPVSPAELSEIIKILGKAKMVNKALS 215
           +HDSTTY ALI+CL+E+GL GEMW+ IQDMVRS C +SPA+LSEI+KILGK+KMVNKALS
Sbjct: 124 EHDSTTYFALINCLDEAGLYGEMWKIIQDMVRSTCIISPADLSEIVKILGKSKMVNKALS 183

Query: 216 VFYQIKGRKCKPTATIYNTLILMLMQEGHHEKIHELYNEICSEGNCSPDTITYTALISAF 275
           VFYQIKGRKCKPTA  YN++IL+LMQE H+EK+HELYNE+C+EGNC PDT+TY++LISAF
Sbjct: 184 VFYQIKGRKCKPTANTYNSMILILMQESHYEKVHELYNEMCNEGNCFPDTLTYSSLISAF 243

Query: 276 GKLERYDFAFRLFDEMKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 335
           GKL+R D A RLFDEMKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 244 GKLDRDDSAIRLFDEMKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 303

Query: 336 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 395
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 304 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 363

Query: 396 XXXXXXXXXXXXXXXXXXXXFESKAPASEAALWFEKMKANGVAPSSFTYAILIDGYCKTN 455
           XXXXXXXXXXXXXXXXXXXXFE KAPASEAA WFEKMKANGVAPSSFTY+ILIDG+CKTN
Sbjct: 364 XXXXXXXXXXXXXXXXXXXXFECKAPASEAASWFEKMKANGVAPSSFTYSILIDGFCKTN 423

Query: 456 RVE 459
           RVE
Sbjct: 424 RVE 426

[Close]
BLAST of Carg06487 vs. TrEMBL
Match: tr|A0A2P4HI89|A0A2P4HI89_QUESU (Pentatricopeptide repeat-containing protein OS=Quercus suber OX=58331 GN=CFP56_69014 PE=4 SV=1)

HSP 1 Score: 431.4 bits (1108), Expect = 3.6e-117
Identity = 352/422 (83.41%), Postives = 391/422 (92.65%), Query Frame = 0 

Query: 36  MNFAAFSSKRSISSLPYLSARIKQT-ENEIVEMFRVPSPRPEASNFPINRKVLRKDPSVR 95
           M   + +SKRSIS+L +L  RIKQT ENE+V+MF++ +P+ E  N P+  K+ RKDP+VR
Sbjct: 4   MIVGSIASKRSISTLSHLCERIKQTAENEVVQMFQLSTPKDEMHNLPMRGKLPRKDPAVR 63

Query: 96  TLDERFIRILKIFKWGSDAEKAIEVLKLKVDHRLVRQVLQIDVEIRVKIQFFKWAGKRKN 155
           TLDERFIRILKIFKWG DAEKA+EVLKL+VDHRLVR+VL+IDVE+ VKIQFFKWAGKR+N
Sbjct: 64  TLDERFIRILKIFKWGPDAEKALEVLKLRVDHRLVREVLKIDVEVNVKIQFFKWAGKRRN 123

Query: 156 FQHDSTTYMALIHCLEESGLVGEMWRTIQDMVRSPCPVSPAELSEIIKILGKAKMVNKAL 215
           F+HDSTTYMALIHCL+E+G+ GEMW+T+Q+MVRS C + PAELSEI+K+LGKAKMVNKAL
Sbjct: 124 FEHDSTTYMALIHCLDEAGINGEMWKTVQEMVRSTCILGPAELSEIVKVLGKAKMVNKAL 183

Query: 216 SVFYQIKGRKCKPTATIYNTLILMLMQEGHHEKIHELYNEICSEGNCSPDTITYTALISA 275
           SVFYQIKGRKCKPTA  YNT+ILMLMQEGHHEK+HELYNE+C+EGNC PDT+TY+ALIS 
Sbjct: 184 SVFYQIKGRKCKPTANTYNTMILMLMQEGHHEKVHELYNEMCNEGNCFPDTVTYSALIST 243

Query: 276 FGKLERYDFAFRLFDEMKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 335
           FGKL R D A RLFDEMKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 244 FGKLGREDSAIRLFDEMKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 303

Query: 336 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 395
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 304 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 363

Query: 396 XXXXXXXXXXXXXXXXXXXXXFESKAPASEAALWFEKMKANGVAPSSFTYAILIDGYCKT 455
           XXXXXXXXXXXXXXXXXXXXX ESKAPASEA+LWFEKMKANG+APSSFTY+ILIDG+CKT
Sbjct: 364 XXXXXXXXXXXXXXXXXXXXXXESKAPASEASLWFEKMKANGIAPSSFTYSILIDGFCKT 423

Query: 456 NR 457
           NR
Sbjct: 424 NR 425

[Close]
BLAST of Carg06487 vs. TrEMBL
Match: tr|A0A2C9W394|A0A2C9W394_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_04G123300 PE=4 SV=1)

HSP 1 Score: 425.2 bits (1092), Expect = 2.6e-115
Identity = 353/419 (84.25%), Postives = 382/419 (91.17%), Query Frame = 0 

Query: 40  AFSSKRSISSLPYLSARIKQTENEIVEMFRVPSPRPEASNFPINRKVLRKDPSVRTLDER 99
           + +SKRSIS+L +L  RIKQTENEIV+MFR+P  + E  N PIN K+ RK  SVR LDER
Sbjct: 8   SIASKRSISTLSHLCDRIKQTENEIVQMFRLPVLKDEKQNLPINSKISRKGTSVRILDER 67

Query: 100 FIRILKIFKWGSDAEKAIEVLKLKVDHRLVRQVLQIDVEIRVKIQFFKWAGKRKNFQHDS 159
           FIRILKIFKWG DAEKA+EVLKLKVDHRLVR VL+IDVEI VKIQFFKW GKR+NF+HDS
Sbjct: 68  FIRILKIFKWGPDAEKALEVLKLKVDHRLVRDVLKIDVEINVKIQFFKWVGKRRNFEHDS 127

Query: 160 TTYMALIHCLEESGLVGEMWRTIQDMVRSPCPVSPAELSEIIKILGKAKMVNKALSVFYQ 219
           TTYMALIHCL+E+ L GEMW+TIQDM RS C  SPA+LSEI+KILG AKMVNKALSVFYQ
Sbjct: 128 TTYMALIHCLDEARLYGEMWKTIQDMARSTCMTSPADLSEIVKILGNAKMVNKALSVFYQ 187

Query: 220 IKGRKCKPTATIYNTLILMLMQEGHHEKIHELYNEICSEGNCSPDTITYTALISAFGKLE 279
           IKG KCKPTA+ YN++ILMLM+ GHHEK+HELYNE+C+EG+C PDTITYTALISAFGKL 
Sbjct: 188 IKGHKCKPTASTYNSMILMLMRGGHHEKVHELYNEMCNEGSCFPDTITYTALISAFGKLG 247

Query: 280 RYDFAFRLFDEMKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 339
           R D+A RLFDEMKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 248 RDDYAIRLFDEMKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 307

Query: 340 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 399
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 308 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 367

Query: 400 XXXXXXXXXXXXXXXXFESKAPASEAALWFEKMKANGVAPSSFTYAILIDGYCKTNRVE 459
           XXXXXXXXXXXXXXXXFE KAPASEA  WFEKM+ANGV PSSFTY+ILIDG+CKTNRVE
Sbjct: 368 XXXXXXXXXXXXXXXXFECKAPASEAVSWFEKMQANGVTPSSFTYSILIDGFCKTNRVE 426

The following BLAST results are available for this feature:
BLAST of Carg06487 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022955569.13.1e-15299.53pentatricopeptide repeat-containing protein At3g16010 [Cucurbita moschata][more]
XP_023528001.19.0e-15299.29pentatricopeptide repeat-containing protein At3g16010 [Cucurbita pepo subsp. pep... [more]
XP_022980859.11.3e-15098.10pentatricopeptide repeat-containing protein At3g16010 [Cucurbita maxima][more]
XP_022153666.11.8e-13993.35pentatricopeptide repeat-containing protein At3g16010 [Momordica charantia][more]
XP_008447498.19.6e-13893.36PREDICTED: pentatricopeptide repeat-containing protein At3g16010 [Cucumis melo][more]
BLAST of Carg06487 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G16010.11.7e-10478.76Pentatricopeptide repeat (PPR-like) superfamily protein[more]
AT2G30780.12.3e-0829.41Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT1G53330.18.7e-0826.76Pentatricopeptide repeat (PPR) superfamily protein[more]
AT1G77405.11.5e-0724.80Pentatricopeptide repeat (PPR) superfamily protein[more]
AT1G18900.31.5e-0730.11Pentatricopeptide repeat (PPR) superfamily protein[more]
BLAST of Carg06487 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9LW84|PP236_ARATH3.1e-10378.76Pentatricopeptide repeat-containing protein At3g16010 OS=Arabidopsis thaliana OX... [more]
sp|O49343|PP177_ARATH4.1e-0729.41Pentatricopeptide repeat-containing protein At2g30780 OS=Arabidopsis thaliana OX... [more]
sp|Q9MAG8|PPR79_ARATH1.6e-0626.76Putative pentatricopeptide repeat-containing protein At1g53330 OS=Arabidopsis th... [more]
sp|Q1PFC5|PP130_ARATH2.7e-0624.80Pentatricopeptide repeat-containing protein At1g77405 OS=Arabidopsis thaliana OX... [more]
sp|Q8GYP6|PPR49_ARATH2.7e-0630.11Pentatricopeptide repeat-containing protein At1g18900 OS=Arabidopsis thaliana OX... [more]
BLAST of Carg06487 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3BH01|A0A1S3BH01_CUCME6.4e-13893.36pentatricopeptide repeat-containing protein At3g16010 OS=Cucumis melo OX=3656 GN... [more]
tr|A0A2P4HI96|A0A2P4HI96_QUESU1.5e-11883.61Pentatricopeptide repeat-containing protein OS=Quercus suber OX=58331 GN=CFP56_6... [more]
tr|A0A067KZG9|A0A067KZG9_JATCU7.3e-11883.69Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_06260 PE=4 SV=1[more]
tr|A0A2P4HI89|A0A2P4HI89_QUESU3.6e-11783.41Pentatricopeptide repeat-containing protein OS=Quercus suber OX=58331 GN=CFP56_6... [more]
tr|A0A2C9W394|A0A2C9W394_MANES2.6e-11584.25Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_04G123300 PE=4 SV=... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR002885Pentatricopeptide_repeat
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg06487-RACarg06487-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF12854PPR_1coord: 364..396
e-value: 8.8E-8
score: 31.6
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 161..188
e-value: 0.96
score: 9.7
coord: 513..542
e-value: 2.2E-6
score: 27.4
coord: 200..225
e-value: 0.8
score: 10.0
coord: 478..505
e-value: 8.6E-4
score: 19.3
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 614..660
e-value: 9.5E-14
score: 51.2
coord: 228..276
e-value: 3.3E-10
score: 39.9
coord: 403..453
e-value: 5.7E-15
score: 55.1
coord: 544..593
e-value: 4.8E-15
score: 55.4
coord: 300..347
e-value: 4.2E-12
score: 45.9
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 373..405
e-value: 1.5E-5
score: 22.9
coord: 266..299
e-value: 2.0E-9
score: 35.0
coord: 200..228
e-value: 1.7E-4
score: 19.6
coord: 513..546
e-value: 1.3E-9
score: 35.6
coord: 231..265
e-value: 1.9E-4
score: 19.4
coord: 336..370
e-value: 2.9E-9
score: 34.5
coord: 547..581
e-value: 2.5E-10
score: 37.9
coord: 583..616
e-value: 2.6E-4
score: 19.0
coord: 617..650
e-value: 2.2E-10
score: 38.1
coord: 478..505
e-value: 9.5E-5
score: 20.3
coord: 442..474
e-value: 4.7E-10
score: 37.0
coord: 302..334
e-value: 2.4E-6
score: 25.4
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 193..227
score: 7.881
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 334..368
score: 12.485
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 615..649
score: 12.891
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 299..333
score: 10.457
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 510..544
score: 12.321
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 580..614
score: 10.523
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 440..474
score: 13.658
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 158..192
score: 8.758
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 264..298
score: 13.11
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 545..579
score: 13.669
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 369..403
score: 10.72
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 475..505
score: 8.265
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 404..439
score: 10.326
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 228..262
score: 7.87
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 115..247
e-value: 1.6E-16
score: 62.1
coord: 575..661
e-value: 1.6E-25
score: 91.5
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 249..397
e-value: 1.1E-43
score: 151.8
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 470..574
e-value: 1.6E-26
score: 95.0
coord: 398..469
e-value: 3.7E-20
score: 74.2
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 41..659
NoneNo IPR availablePANTHERPTHR24015:SF970SUBFAMILY NOT NAMEDcoord: 41..659
NoneNo IPR availableSUPERFAMILYSSF81901HCP-likecoord: 369..569
NoneNo IPR availableSUPERFAMILYSSF81901HCP-likecoord: 232..393

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg06487Cla012681Watermelon (97103) v1carwmB0120
Carg06487Csa3G478200Cucumber (Chinese Long) v2carcuB0127
Carg06487MELO3C012957Melon (DHL92) v3.5.1carmeB0125
Carg06487ClCG07G013030Watermelon (Charleston Gray)carwcgB0121
Carg06487CSPI03G24110Wild cucumber (PI 183967)carcpiB0132
Carg06487CmaCh14G013140Cucurbita maxima (Rimu)carcmaB0154
Carg06487CmoCh14G013500Cucurbita moschata (Rifu)carcmoB0163
Carg06487Lsi07G004980Bottle gourd (USVL1VR-Ls)carlsiB109
Carg06487Cp4.1LG03g14020Cucurbita pepo (Zucchini)carcpeB0176
Carg06487CsGy3G023140Cucumber (Gy14) v2carcgybB0125
Carg06487MELO3C012957.2Melon (DHL92) v3.6.1carmedB0128
Carg06487CsaV3_3G025150Cucumber (Chinese Long) v3carcucB0135
Carg06487Cla97C07G139830Watermelon (97103) v2carwmbB0126
Carg06487Bhi01G002654Wax gourdcarwgoB0138
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Carg06487Cucurbita pepo (Zucchini)carcpeB0171
Carg06487Cucurbita pepo (Zucchini)carcpeB0173
Carg06487Cucurbita pepo (Zucchini)carcpeB0175
Carg06487Wild cucumber (PI 183967)carcpiB0131
Carg06487Wild cucumber (PI 183967)carcpiB0135
Carg06487Cucumber (Chinese Long) v2carcuB0130
Carg06487Cucumber (Chinese Long) v3carcucB0139
Carg06487Bottle gourd (USVL1VR-Ls)carlsiB106
Carg06487Melon (DHL92) v3.5.1carmeB0121
Carg06487Melon (DHL92) v3.6.1carmedB0130
Carg06487Melon (DHL92) v3.6.1carmedB0124
Carg06487Watermelon (Charleston Gray)carwcgB0117
Carg06487Watermelon (97103) v1carwmB0117
Carg06487Watermelon (97103) v2carwmbB0127
Carg06487Silver-seed gourdcarcarB139
Carg06487Silver-seed gourdcarcarB140
Carg06487Silver-seed gourdcarcarB143
Carg06487Silver-seed gourdcarcarB145
Carg06487Cucumber (Gy14) v2carcgybB0130
Carg06487Cucumber (Gy14) v1carcgyB0147
Carg06487Cucurbita maxima (Rimu)carcmaB0155
Carg06487Cucurbita maxima (Rimu)carcmaB0157
Carg06487Cucurbita maxima (Rimu)carcmaB0160
Carg06487Cucurbita moschata (Rifu)carcmoB0164
Carg06487Cucurbita moschata (Rifu)carcmoB0166
Carg06487Cucurbita moschata (Rifu)carcmoB0169