Lsi07G004800 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi07G004800
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionLys-63-specific deubiquitinase BRCC36
Locationchr07 : 5047403 .. 5049403 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTAGTCACTTATCAACGGAAGAATAGTGAGGGCATTTGGGCATTTGAGCATTTTGGTAAGTCTAAATATTATATAAATTAGAGAGCTTAATCCATACACACTTATAAATTTTTTTTAATAAAAGCTAACTTAAAGATTTTCATAAACTCATTTGATGAAAAGTTATTTTGAGTGATTACTAAATATTCCAATTTTTTTTAAAATGATTTTTTTTTAAAGATATTTTAAAAGTTAAACCAAATCTATCCTAAATTATTGGAGGTGATTATAATATTTTTTAGGGTTCTTTTCAAATATAGAAAAATAAGTCAAACTATTTACAAATATAGAAAAATTTTACAGTCTATCATGTCTATCATGATAGACTGCGATAGAATTTTATCGCTTCCTATCGCCCCAGCGATAGAATTATTTGCTTGAGCGATAGAATTCTATCGCTTTCTATCGCGGTCTATCACTGATAGATAGTAAAATTTTTCTATATTTGTAAATAGTTTTATATTTTTTCTGTTTATAGTAATTTTCCTATTTTTTTTAACCCCATAAAAATAGGGAAATTTTCACAAAGAGAAAAAATATAAAGTATTTATAGAAAATAGTAAAAAAAATATTAATAGACATGGATAGACTTCTATCACATTTATCAGTGATAAACTTCTTTCATTTCTAATAGACTTCTATTAGCATTTATCACAACTATATAAAATTTTACTATGTAAGTAGTTTCTTTTTTTTCTCTCTCTTTTTTTTTTAATTTCTCTTGAAAATACGATGAAAGAGCAACAATTTTTTTTTTAACAAGAATTTCTTTTGCTTTCCTTAAATGCAACCAAATAAAAAAATAATTAAAAAAGAGGTCGTGTCTAAATCGCATAGTCACGAATCAGATATCAACGGGTACGCACGACCGTACTGAATTGATACTCAGCCTTGCGATCCGCTGCACAAGGTCCTTCGAACACACCGGCCAGTGAGTCTGGGTTGAGAGTTGAAATTAAAGCTCGAAGATCCTTCCGAATCTCTCTCTCTCTCTCCTTTTGCCTTCATTCATTCTCTACAGAGAGAATCGAAGTTTCTGAAATTCAGAAAGAAAGCGGCGATCCAAAGATGTCTCTGACGGCCGTGAAGATGTCCGAAGATATCTGGTTTACTTGTCTCACTCATGCATTGTCCACCGAGACTGAAGAAATCATGGGGCTTCTCCTTGGCGATATTCAGGTCACTCTCTTTATTTCCACTCTCAGTCCATTTTGCATAATCTGCTGTCGATTTTGCTTTAATTTCGGTTACTGGGTGTGTATTTCTTGCCTTGGTTGCTTATTTGAAACAAAGGTTATATTGGTTTGTTTATTTTGGCAAATGGGGTTGTTTGTGCTTTGAATTCTCTTTATTTTAGAGTTAGAGGTAAGATTTTTGTGCTCCTCTGGCTCGGTTAATTGATTTCTTAGCTATTTTGTAAAATTCACAGTGAGGAGTGGTATTTGTGGTACTCTCTGCACAGTCTTCTGACTCCATATGATGTCTGTTAGGAATGGACTTGGTTTCTTTTTCACATTAGTGCGTGTGATTTTGTTACATTAATCACACAGTTCTAACACTTGTGTTCTACCTCTTGTTAGATGGTCTATCCGAATTATGGTTCATTCGTTAACACACGATAGAGATTTTGATTCTACAATTTCTTTCAAGAGTTCGAGTAATTTCTTTTTCATGGCTGATTCTCTAAGCTTTAAGCTATTTTCATCATTTTTCTTTCAGGGTGTTTTCCTTTTTAAAAGGTAGTTGTTATTTCGGTTCTGCGTTCTTCCTGACCATGAGATTTTGCAGCATTCAAAAAATGGTAGTGTAACTGCACTAATTTGGGGAGCATCGCCTCAGACACGGTCTGACAGAAGGAAGGACCGGGTGGAGACTCATCCTGAACAATTGGCTGCTGCATCTGCCCAGGCTGAGATATCCTTTGCTCCTTTTAGCTTTGGGAAATTCTTCTTCTTCTAG

mRNA sequence

ATGGTAGTCACTTATCAACGGAAGAATAGTGAGGGCATTTGGGCATTTGAGCATTTTGCCTTGCGATCCGCTGCACAAGGTCCTTCGAACACACCGGCCAGTGAGTCTGGGTTGAGAGTTGAAATTAAAGCTCGAAGATCCTTCCGAATCTCTCTCTCTCTCTCCTTTTGCCTTCATTCATTCTCTACAGAGAGAATCGAAGTTTCTGAAATTCAGAAAGAAAGCGGCGATCCAAAGATGTCTCTGACGGCCGTGAAGATGTCCGAAGATATCTGGTTTACTTGTCTCACTCATGCATTGTCCACCGAGACTGAAGAAATCATGGGGCTTCTCCTTGGCGATATTCAGCATTCAAAAAATGGTAGTGTAACTGCACTAATTTGGGGAGCATCGCCTCAGACACGGTCTGACAGAAGGAAGGACCGGGTGGAGACTCATCCTGAACAATTGGCTGCTGCATCTGCCCAGGCTGAGATATCCTTTGCTCCTTTTAGCTTTGGGAAATTCTTCTTCTTCTAG

Coding sequence (CDS)

ATGGTAGTCACTTATCAACGGAAGAATAGTGAGGGCATTTGGGCATTTGAGCATTTTGCCTTGCGATCCGCTGCACAAGGTCCTTCGAACACACCGGCCAGTGAGTCTGGGTTGAGAGTTGAAATTAAAGCTCGAAGATCCTTCCGAATCTCTCTCTCTCTCTCCTTTTGCCTTCATTCATTCTCTACAGAGAGAATCGAAGTTTCTGAAATTCAGAAAGAAAGCGGCGATCCAAAGATGTCTCTGACGGCCGTGAAGATGTCCGAAGATATCTGGTTTACTTGTCTCACTCATGCATTGTCCACCGAGACTGAAGAAATCATGGGGCTTCTCCTTGGCGATATTCAGCATTCAAAAAATGGTAGTGTAACTGCACTAATTTGGGGAGCATCGCCTCAGACACGGTCTGACAGAAGGAAGGACCGGGTGGAGACTCATCCTGAACAATTGGCTGCTGCATCTGCCCAGGCTGAGATATCCTTTGCTCCTTTTAGCTTTGGGAAATTCTTCTTCTTCTAG

Protein sequence

MVVTYQRKNSEGIWAFEHFALRSAAQGPSNTPASESGLRVEIKARRSFRISLSLSFCLHSFSTERIEVSEIQKESGDPKMSLTAVKMSEDIWFTCLTHALSTETEEIMGLLLGDIQHSKNGSVTALIWGASPQTRSDRRKDRVETHPEQLAAASAQAEISFAPFSFGKFFFF
Homology
[Close]
BLAST of Lsi07G004800 vs. Swiss-Prot
Match: BRCC3_SALSA (Lys-63-specific deubiquitinase BRCC36 OS=Salmo salar GN=brcc3 PE=2 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 1.3e-10
Identity = 34/79 (43.04%), Postives = 54/79 (68.35%), Query Frame = 1 

Query: 80  MSLTAVKMSEDIWFTCLTHALSTETEEIMGLLLGDIQHSKNGSVTALIWGASPQTRSDRR 139
           M+++AV +  D +  C+ HALSTE EE+MGL +G++  ++   + ++I       RSD+R
Sbjct: 1   MAVSAVHLESDAFLVCMNHALSTEKEEVMGLCIGEVDTNRIVHIHSVI----ILRRSDKR 60

Query: 140 KDRVETHPEQLAAASAQAE 159
           KDRVE  PEQL++A+ +AE
Sbjct: 61  KDRVEISPEQLSSAATEAE 75

[Close]
BLAST of Lsi07G004800 vs. Swiss-Prot
Match: BRCC3_XENTR (Lys-63-specific deubiquitinase BRCC36 OS=Xenopus tropicalis GN=brcc3 PE=2 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 2.3e-10
Identity = 35/79 (44.30%), Postives = 53/79 (67.09%), Query Frame = 1 

Query: 80  MSLTAVKMSEDIWFTCLTHALSTETEEIMGLLLGDIQHSKNGSVTALIWGASPQTRSDRR 139
           M++ AV +  D +  C+TH+LSTE EE+MGL +G++   K   + ++I       RSD+R
Sbjct: 1   MAVQAVHIQGDAFLVCVTHSLSTEREEVMGLCIGEVDTQKVVHIHSVI----ILRRSDKR 60

Query: 140 KDRVETHPEQLAAASAQAE 159
           KDRVE  PEQL+AA+ +A+
Sbjct: 61  KDRVEISPEQLSAATTEAD 75

[Close]
BLAST of Lsi07G004800 vs. Swiss-Prot
Match: BRCC3_XENLA (Lys-63-specific deubiquitinase BRCC36 OS=Xenopus laevis GN=brcc3 PE=2 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 3.0e-10
Identity = 35/79 (44.30%), Postives = 53/79 (67.09%), Query Frame = 1 

Query: 80  MSLTAVKMSEDIWFTCLTHALSTETEEIMGLLLGDIQHSKNGSVTALIWGASPQTRSDRR 139
           M++ AV +  D +  C+TH+LSTE EE+MGL +G++   K   + ++I       RSD+R
Sbjct: 1   MAVQAVHIQGDAFLVCVTHSLSTEREEVMGLCIGEVDTQKLVHIHSVI----ILRRSDKR 60

Query: 140 KDRVETHPEQLAAASAQAE 159
           KDRVE  PEQL+AA+ +A+
Sbjct: 61  KDRVEISPEQLSAATIEAD 75

[Close]
BLAST of Lsi07G004800 vs. Swiss-Prot
Match: BRCC3_CALJA (Lys-63-specific deubiquitinase BRCC36 OS=Callithrix jacchus GN=BRCC3 PE=3 SV=2)

HSP 1 Score: 63.2 bits (152), Expect = 3.3e-09
Identity = 37/98 (37.76%), Postives = 49/98 (50.00%), Query Frame = 1 

Query: 81  SLTAVKMSEDIWFTCLTHALSTETEEIMGLLLGDIQHSKNGSVTALIWGASPQT------ 140
           ++ AV +  D +  CL HALSTE EE+MGL +G++             G   +T      
Sbjct: 8   AVQAVHLESDAFLVCLNHALSTEKEEVMGLCIGELNDDTRSDSKFAYTGTEMRTVAEKVD 67

Query: 141 --------------RSDRRKDRVETHPEQLAAASAQAE 159
                         RSD+RKDRVE  PEQL+AAS +AE
Sbjct: 68  AVRIVHIHSVIILRRSDKRKDRVEISPEQLSAASTEAE 105

[Close]
BLAST of Lsi07G004800 vs. Swiss-Prot
Match: BRCC3_HUMAN (Lys-63-specific deubiquitinase BRCC36 OS=Homo sapiens GN=BRCC3 PE=1 SV=2)

HSP 1 Score: 63.2 bits (152), Expect = 3.3e-09
Identity = 37/98 (37.76%), Postives = 49/98 (50.00%), Query Frame = 1 

Query: 81  SLTAVKMSEDIWFTCLTHALSTETEEIMGLLLGDIQHSKNGSVTALIWGASPQT------ 140
           ++ AV +  D +  CL HALSTE EE+MGL +G++             G   +T      
Sbjct: 8   AVQAVHLESDAFLVCLNHALSTEKEEVMGLCIGELNDDTRSDSKFAYTGTEMRTVAEKVD 67

Query: 141 --------------RSDRRKDRVETHPEQLAAASAQAE 159
                         RSD+RKDRVE  PEQL+AAS +AE
Sbjct: 68  AVRIVHIHSVIILRRSDKRKDRVEISPEQLSAASTEAE 105

[Close]
BLAST of Lsi07G004800 vs. TrEMBL
Match: A0A0A0KWR1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G004830 PE=4 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 2.4e-35
Identity = 77/79 (97.47%), Postives = 79/79 (100.00%), Query Frame = 1 

Query: 80  MSLTAVKMSEDIWFTCLTHALSTETEEIMGLLLGDIQHSKNGSVTALIWGASPQTRSDRR 139
           MSLTAVKMSED+WFTCLTHALSTETEEIMGLLLGDI+HSKNGSVTALIWGASPQTRSDRR
Sbjct: 1   MSLTAVKMSEDVWFTCLTHALSTETEEIMGLLLGDIEHSKNGSVTALIWGASPQTRSDRR 60

Query: 140 KDRVETHPEQLAAASAQAE 159
           KDRVETHPEQLAAASAQAE
Sbjct: 61  KDRVETHPEQLAAASAQAE 79

[Close]
BLAST of Lsi07G004800 vs. TrEMBL
Match: F6HX94_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_09s0002g06090 PE=4 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 4.6e-34
Identity = 77/87 (88.51%), Postives = 81/87 (93.10%), Query Frame = 1 

Query: 80  MSLTAVKMSEDIWFTCLTHALSTETEEIMGLLLGDIQHSKNGSVTALIWGASPQTRSDRR 139
           MSLT VKMSED+W TC THALSTETEEIMGLLLGDI++SKNGSVTALIWGASPQTRSDRR
Sbjct: 1   MSLTCVKMSEDVWLTCTTHALSTETEEIMGLLLGDIEYSKNGSVTALIWGASPQTRSDRR 60

Query: 140 KDRVETHPEQLAAASAQAEISFAPFSF 167
           KDRVET+PEQLAAASAQAEISF  F F
Sbjct: 61  KDRVETNPEQLAAASAQAEISFICFLF 87

[Close]
BLAST of Lsi07G004800 vs. TrEMBL
Match: A0A078IZ76_BRANA (BnaA07g38320D protein OS=Brassica napus GN=BnaA07g38320D PE=4 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 1.9e-32
Identity = 74/93 (79.57%), Postives = 83/93 (89.25%), Query Frame = 1 

Query: 80  MSLTAVKMSEDIWFTCLTHALSTETEEIMGLLLGDIQHSKNGSVTALIWGASPQTRSDRR 139
           M+LT V MSED+W TCLTHALSTETEEIMGLLLGDIQ+SKNGS TA+IWGASPQ+RSDR+
Sbjct: 1   MALTCVNMSEDVWLTCLTHALSTETEEIMGLLLGDIQYSKNGSATAMIWGASPQSRSDRQ 60

Query: 140 KDRVETHPEQLAAASAQAEISFAPFSFGKFFFF 173
           KDRVET+PEQLAAASAQAEISF  F+    F+F
Sbjct: 61  KDRVETNPEQLAAASAQAEISFLFFAIITIFYF 93

[Close]
BLAST of Lsi07G004800 vs. TrEMBL
Match: V4SII3_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10025661mg PE=4 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 3.3e-32
Identity = 71/79 (89.87%), Postives = 77/79 (97.47%), Query Frame = 1 

Query: 80  MSLTAVKMSEDIWFTCLTHALSTETEEIMGLLLGDIQHSKNGSVTALIWGASPQTRSDRR 139
           MSLT VKMSED+W TCLTHALSTETEEIMGLLLGDI+HSKNG+VTALIWGASPQ+RSDRR
Sbjct: 1   MSLTGVKMSEDVWLTCLTHALSTETEEIMGLLLGDIEHSKNGNVTALIWGASPQSRSDRR 60

Query: 140 KDRVETHPEQLAAASAQAE 159
           KDRVET+PEQLAAASAQA+
Sbjct: 61  KDRVETNPEQLAAASAQAD 79

[Close]
BLAST of Lsi07G004800 vs. TrEMBL
Match: A0A067ECR8_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g014126mg PE=4 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 3.3e-32
Identity = 71/79 (89.87%), Postives = 77/79 (97.47%), Query Frame = 1 

Query: 80  MSLTAVKMSEDIWFTCLTHALSTETEEIMGLLLGDIQHSKNGSVTALIWGASPQTRSDRR 139
           MSLT VKMSED+W TCLTHALSTETEEIMGLLLGDI+HSKNG+VTALIWGASPQ+RSDRR
Sbjct: 1   MSLTGVKMSEDVWLTCLTHALSTETEEIMGLLLGDIEHSKNGNVTALIWGASPQSRSDRR 60

Query: 140 KDRVETHPEQLAAASAQAE 159
           KDRVET+PEQLAAASAQA+
Sbjct: 61  KDRVETNPEQLAAASAQAD 79

[Close]
BLAST of Lsi07G004800 vs. TAIR10
Match: AT3G06820.2 (AT3G06820.2 Mov34/MPN/PAD-1 family protein)

HSP 1 Score: 134.0 bits (336), Expect = 8.6e-32
Identity = 67/80 (83.75%), Postives = 74/80 (92.50%), Query Frame = 1 

Query: 80  MSLTAVKMSEDIWFTCLTHALSTETEEIMGLLLGDIQHSKNG-SVTALIWGASPQTRSDR 139
           MSLT V MSED+W TCLTHALSTETEEIMGLLLGDI++SKNG S TA+IWGASPQ RSDR
Sbjct: 1   MSLTCVNMSEDVWLTCLTHALSTETEEIMGLLLGDIEYSKNGESATAMIWGASPQPRSDR 60

Query: 140 RKDRVETHPEQLAAASAQAE 159
           +KDRVET+PEQLAAASAQA+
Sbjct: 61  QKDRVETNPEQLAAASAQAD 80

[Close]
BLAST of Lsi07G004800 vs. TAIR10
Match: AT1G80210.1 (AT1G80210.1 Mov34/MPN/PAD-1 family protein)

HSP 1 Score: 132.9 bits (333), Expect = 1.9e-31
Identity = 66/80 (82.50%), Postives = 75/80 (93.75%), Query Frame = 1 

Query: 80  MSLTAVKMSEDIWFTCLTHALSTETEEIMGLLLGDIQHSKN-GSVTALIWGASPQTRSDR 139
           MSLT V MSED+W TCLTHALSTETEEIMGLLLGDI++SK+ GS TA+IWGASPQ+RSDR
Sbjct: 1   MSLTCVNMSEDVWLTCLTHALSTETEEIMGLLLGDIEYSKDGGSATAMIWGASPQSRSDR 60

Query: 140 RKDRVETHPEQLAAASAQAE 159
           +KDRVET+PEQLAAASAQA+
Sbjct: 61  QKDRVETNPEQLAAASAQAD 80

[Close]
BLAST of Lsi07G004800 vs. NCBI nr
Match: gi|449469008|ref|XP_004152213.1| (PREDICTED: lys-63-specific deubiquitinase BRCC36 [Cucumis sativus])

HSP 1 Score: 156.8 bits (395), Expect = 3.5e-35
Identity = 77/79 (97.47%), Postives = 79/79 (100.00%), Query Frame = 1 

Query: 80  MSLTAVKMSEDIWFTCLTHALSTETEEIMGLLLGDIQHSKNGSVTALIWGASPQTRSDRR 139
           MSLTAVKMSED+WFTCLTHALSTETEEIMGLLLGDI+HSKNGSVTALIWGASPQTRSDRR
Sbjct: 1   MSLTAVKMSEDVWFTCLTHALSTETEEIMGLLLGDIEHSKNGSVTALIWGASPQTRSDRR 60

Query: 140 KDRVETHPEQLAAASAQAE 159
           KDRVETHPEQLAAASAQAE
Sbjct: 61  KDRVETHPEQLAAASAQAE 79

[Close]
BLAST of Lsi07G004800 vs. NCBI nr
Match: gi|659108552|ref|XP_008454260.1| (PREDICTED: COP9 signalosome complex subunit 5-like isoform X1 [Cucumis melo])

HSP 1 Score: 156.8 bits (395), Expect = 3.5e-35
Identity = 77/79 (97.47%), Postives = 79/79 (100.00%), Query Frame = 1 

Query: 80  MSLTAVKMSEDIWFTCLTHALSTETEEIMGLLLGDIQHSKNGSVTALIWGASPQTRSDRR 139
           MSLTAVKMSED+WFTCLTHALSTETEEIMGLLLGDI+HSKNGSVTALIWGASPQTRSDRR
Sbjct: 1   MSLTAVKMSEDVWFTCLTHALSTETEEIMGLLLGDIEHSKNGSVTALIWGASPQTRSDRR 60

Query: 140 KDRVETHPEQLAAASAQAE 159
           KDRVETHPEQLAAASAQAE
Sbjct: 61  KDRVETHPEQLAAASAQAE 79

[Close]
BLAST of Lsi07G004800 vs. NCBI nr
Match: gi|1009174413|ref|XP_015868334.1| (PREDICTED: lys-63-specific deubiquitinase BRCC36 [Ziziphus jujuba])

HSP 1 Score: 149.1 bits (375), Expect = 7.3e-33
Identity = 85/127 (66.93%), Postives = 97/127 (76.38%), Query Frame = 1 

Query: 37  GLRVEIKARRSFRISLSLSFCLHSFSTERIEVSEIQKESGDP-----KMSLTAVKMSEDI 96
           GLR EI+  R F    + +   HS  T+ ++      E+GD      +MSLT VKMSED+
Sbjct: 7   GLRSEIQ--RFFFFCFARAIRTHS--TKALQGMVWTLEAGDRERTRIRMSLTGVKMSEDV 66

Query: 97  WFTCLTHALSTETEEIMGLLLGDIQHSKNGSVTALIWGASPQTRSDRRKDRVETHPEQLA 156
           W TCLTHALSTETEEIMGLLLGDI++SKNGS TALIWGASPQTRSDRRKDRVET+PEQLA
Sbjct: 67  WLTCLTHALSTETEEIMGLLLGDIEYSKNGSATALIWGASPQTRSDRRKDRVETNPEQLA 126

Query: 157 AASAQAE 159
           AASAQAE
Sbjct: 127 AASAQAE 129

[Close]
BLAST of Lsi07G004800 vs. NCBI nr
Match: gi|1009180540|ref|XP_015871678.1| (PREDICTED: lys-63-specific deubiquitinase BRCC36-like, partial [Ziziphus jujuba])

HSP 1 Score: 149.1 bits (375), Expect = 7.3e-33
Identity = 85/127 (66.93%), Postives = 97/127 (76.38%), Query Frame = 1 

Query: 37  GLRVEIKARRSFRISLSLSFCLHSFSTERIEVSEIQKESGDP-----KMSLTAVKMSEDI 96
           GLR EI+  R F    + +   HS  T+ ++      E+GD      +MSLT VKMSED+
Sbjct: 7   GLRSEIQ--RFFFFCFARAIRTHS--TKALQGMVWTLEAGDRERTRIRMSLTGVKMSEDV 66

Query: 97  WFTCLTHALSTETEEIMGLLLGDIQHSKNGSVTALIWGASPQTRSDRRKDRVETHPEQLA 156
           W TCLTHALSTETEEIMGLLLGDI++SKNGS TALIWGASPQTRSDRRKDRVET+PEQLA
Sbjct: 67  WLTCLTHALSTETEEIMGLLLGDIEYSKNGSATALIWGASPQTRSDRRKDRVETNPEQLA 126

Query: 157 AASAQAE 159
           AASAQAE
Sbjct: 127 AASAQAE 129

[Close]
BLAST of Lsi07G004800 vs. NCBI nr
Match: gi|674875258|emb|CDY57692.1| (BnaA07g38320D [Brassica napus])

HSP 1 Score: 147.1 bits (370), Expect = 2.8e-32
Identity = 74/93 (79.57%), Postives = 83/93 (89.25%), Query Frame = 1 

Query: 80  MSLTAVKMSEDIWFTCLTHALSTETEEIMGLLLGDIQHSKNGSVTALIWGASPQTRSDRR 139
           M+LT V MSED+W TCLTHALSTETEEIMGLLLGDIQ+SKNGS TA+IWGASPQ+RSDR+
Sbjct: 1   MALTCVNMSEDVWLTCLTHALSTETEEIMGLLLGDIQYSKNGSATAMIWGASPQSRSDRQ 60

Query: 140 KDRVETHPEQLAAASAQAEISFAPFSFGKFFFF 173
           KDRVET+PEQLAAASAQAEISF  F+    F+F
Sbjct: 61  KDRVETNPEQLAAASAQAEISFLFFAIITIFYF 93

The following BLAST results are available for this feature:
BLAST of Lsi07G004800 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BRCC3_SALSA1.3e-1043.04Lys-63-specific deubiquitinase BRCC36 OS=Salmo salar GN=brcc3 PE=2 SV=1[more]
BRCC3_XENTR2.3e-1044.30Lys-63-specific deubiquitinase BRCC36 OS=Xenopus tropicalis GN=brcc3 PE=2 SV=1[more]
BRCC3_XENLA3.0e-1044.30Lys-63-specific deubiquitinase BRCC36 OS=Xenopus laevis GN=brcc3 PE=2 SV=1[more]
BRCC3_CALJA3.3e-0937.76Lys-63-specific deubiquitinase BRCC36 OS=Callithrix jacchus GN=BRCC3 PE=3 SV=2[more]
BRCC3_HUMAN3.3e-0937.76Lys-63-specific deubiquitinase BRCC36 OS=Homo sapiens GN=BRCC3 PE=1 SV=2[more]
BLAST of Lsi07G004800 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KWR1_CUCSA2.4e-3597.47Uncharacterized protein OS=Cucumis sativus GN=Csa_4G004830 PE=4 SV=1[more]
F6HX94_VITVI4.6e-3488.51Putative uncharacterized protein OS=Vitis vinifera GN=VIT_09s0002g06090 PE=4 SV=... [more]
A0A078IZ76_BRANA1.9e-3279.57BnaA07g38320D protein OS=Brassica napus GN=BnaA07g38320D PE=4 SV=1[more]
V4SII3_9ROSI3.3e-3289.87Uncharacterized protein OS=Citrus clementina GN=CICLE_v10025661mg PE=4 SV=1[more]
A0A067ECR8_CITSI3.3e-3289.87Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g014126mg PE=4 SV=1[more]
BLAST of Lsi07G004800 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G06820.28.6e-3283.75 Mov34/MPN/PAD-1 family protein[more]
AT1G80210.11.9e-3182.50 Mov34/MPN/PAD-1 family protein[more]
BLAST of Lsi07G004800 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449469008|ref|XP_004152213.1|3.5e-3597.47PREDICTED: lys-63-specific deubiquitinase BRCC36 [Cucumis sativus][more]
gi|659108552|ref|XP_008454260.1|3.5e-3597.47PREDICTED: COP9 signalosome complex subunit 5-like isoform X1 [Cucumis melo][more]
gi|1009174413|ref|XP_015868334.1|7.3e-3366.93PREDICTED: lys-63-specific deubiquitinase BRCC36 [Ziziphus jujuba][more]
gi|1009180540|ref|XP_015871678.1|7.3e-3366.93PREDICTED: lys-63-specific deubiquitinase BRCC36-like, partial [Ziziphus jujuba][more]
gi|674875258|emb|CDY57692.1|2.8e-3279.57BnaA07g38320D [Brassica napus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR000555JAMM/MPN+_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0006281 DNA repair
biological_process GO:0070536 protein K63-linked deubiquitination
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005575 cellular_component
cellular_component GO:0070531 BRCA1-A complex
cellular_component GO:0070552 BRISC complex
molecular_function GO:0005515 protein binding
molecular_function GO:0004843 thiol-dependent ubiquitin-specific protease activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi07G004800.1Lsi07G004800.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000555JAB1/MPN/MOV34 metalloenzyme domainPFAMPF01398JABcoord: 82..148
score: 4.
NoneNo IPR availablePANTHERPTHR10410EUKARYOTIC TRANSLATION INITIATION FACTOR 3 -RELATEDcoord: 40..158
score: 5.5
NoneNo IPR availablePANTHERPTHR10410:SF2LYS-63-SPECIFIC DEUBIQUITINASE BRCC36coord: 40..158
score: 5.5

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Lsi07G004800Cla97C07G139620Watermelon (97103) v2lsiwmbB405
Lsi07G004800Cp4.1LG02g14790Cucurbita pepo (Zucchini)cpelsiB472
Lsi07G004800CsGy4G001290Cucumber (Gy14) v2cgyblsiB285
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi07G004800Silver-seed gourdcarlsiB109
Lsi07G004800Silver-seed gourdcarlsiB182
Lsi07G004800Silver-seed gourdcarlsiB520
Lsi07G004800Silver-seed gourdcarlsiB685
Lsi07G004800Silver-seed gourdcarlsiB939
Lsi07G004800Cucumber (Chinese Long) v3cuclsiB150
Lsi07G004800Cucumber (Chinese Long) v3cuclsiB148
Lsi07G004800Cucumber (Chinese Long) v3cuclsiB331
Lsi07G004800Cucumber (Chinese Long) v3cuclsiB568
Lsi07G004800Watermelon (97103) v2lsiwmbB403
Lsi07G004800Watermelon (97103) v2lsiwmbB417
Lsi07G004800Watermelon (97103) v2lsiwmbB420
Lsi07G004800Wax gourdlsiwgoB546
Lsi07G004800Wax gourdlsiwgoB568
Lsi07G004800Wax gourdlsiwgoB577
Lsi07G004800Bottle gourd (USVL1VR-Ls)lsilsiB117
Lsi07G004800Bottle gourd (USVL1VR-Ls)lsilsiB164
Lsi07G004800Bottle gourd (USVL1VR-Ls)lsilsiB167
Lsi07G004800Cucumber (Gy14) v1cgylsiB113
Lsi07G004800Cucumber (Gy14) v1cgylsiB266
Lsi07G004800Cucurbita maxima (Rimu)cmalsiB081
Lsi07G004800Cucurbita maxima (Rimu)cmalsiB256
Lsi07G004800Cucurbita maxima (Rimu)cmalsiB450
Lsi07G004800Cucurbita maxima (Rimu)cmalsiB736
Lsi07G004800Cucurbita maxima (Rimu)cmalsiB845
Lsi07G004800Cucurbita moschata (Rifu)cmolsiB068
Lsi07G004800Cucurbita moschata (Rifu)cmolsiB137
Lsi07G004800Cucurbita moschata (Rifu)cmolsiB174
Lsi07G004800Cucurbita moschata (Rifu)cmolsiB244
Lsi07G004800Cucurbita moschata (Rifu)cmolsiB349
Lsi07G004800Cucurbita moschata (Rifu)cmolsiB437
Lsi07G004800Cucurbita moschata (Rifu)cmolsiB727
Lsi07G004800Cucurbita moschata (Rifu)cmolsiB829
Lsi07G004800Cucurbita pepo (Zucchini)cpelsiB127
Lsi07G004800Cucurbita pepo (Zucchini)cpelsiB276
Lsi07G004800Cucurbita pepo (Zucchini)cpelsiB516
Lsi07G004800Wild cucumber (PI 183967)cpilsiB136
Lsi07G004800Wild cucumber (PI 183967)cpilsiB137
Lsi07G004800Wild cucumber (PI 183967)cpilsiB311
Lsi07G004800Wild cucumber (PI 183967)cpilsiB546
Lsi07G004800Cucumber (Chinese Long) v2culsiB138
Lsi07G004800Cucumber (Chinese Long) v2culsiB137
Lsi07G004800Cucumber (Chinese Long) v2culsiB312
Lsi07G004800Cucumber (Chinese Long) v2culsiB532
Lsi07G004800Melon (DHL92) v3.5.1lsimeB430
Lsi07G004800Melon (DHL92) v3.5.1lsimeB435
Lsi07G004800Melon (DHL92) v3.5.1lsimeB436
Lsi07G004800Melon (DHL92) v3.5.1lsimeB442
Lsi07G004800Melon (DHL92) v3.5.1lsimeB447
Lsi07G004800Watermelon (Charleston Gray)lsiwcgB387
Lsi07G004800Watermelon (Charleston Gray)lsiwcgB392
Lsi07G004800Watermelon (Charleston Gray)lsiwcgB404
Lsi07G004800Watermelon (Charleston Gray)lsiwcgB406
Lsi07G004800Watermelon (Charleston Gray)lsiwcgB418
Lsi07G004800Watermelon (97103) v1lsiwmB426
Lsi07G004800Watermelon (97103) v1lsiwmB432
Lsi07G004800Watermelon (97103) v1lsiwmB438
Lsi07G004800Watermelon (97103) v1lsiwmB461
Lsi07G004800Cucumber (Gy14) v2cgyblsiB502
Lsi07G004800Melon (DHL92) v3.6.1lsimedB455
Lsi07G004800Melon (DHL92) v3.6.1lsimedB451
Lsi07G004800Melon (DHL92) v3.6.1lsimedB461
Lsi07G004800Melon (DHL92) v3.6.1lsimedB465