Lsi07G004730 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi07G004730
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionPentatricopeptide repeat-containing family protein
Locationchr07 : 4983905 .. 4985596 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTCTCTCTTCGATCCATTCGAACTCGAAGAGCCTTCTCCTCCAAATTCCAATTTTCAAGAAAGAATGCTGACGACAGTCCTCTGCAACCTTGCTCTGTAATGGCCATTAGAGCCTTCTCCCCCAAATTCCAAATCTCCATTTCACTCTTCTGCTCTCTCTTAAAAACCAATCCTTTCCCTCACCAACGCCCATTCACTTCTCTCGCTACAGCAGCACAAGCAGGATCAGACTCACTGCTTCCATTCCTCGTCAGTGAGATATCTCGCATCCTCAGCGATCACAGAAGCCCTCACCATGACTTGGACCTCGGCCTCTCTTCCTTCTCCTCCAATGTATCCACTGACCTCGTCGAGCAGGTTCTCAAAAGGTGCAAGAATATCGGATTCTCCGCTCATAGGTTCTTCCTCTGGGCTAAAAGAATTCCGGGTTTTGAACCCAGCGCCGACAGCTATCGCATTCTCGTTGACATCTTGGGAAGCAGTGGGCAATTCGCTATCTTGTGGGATTTTCTTATAGAAATAAGGGAGACTCGGTGCTCTGTGATCACACATGAACTTTTCTGGCTTGTATTCAGAGCTTATAGCAGGACTGACTTGCCTCAAGATGCTATTCGGGCCTTCAATCGAATGGGGGAGTTCGGGATGAGGCCTGGTGTTGATGATCTTGATCAGCTCTTGTATATTCTATGCAAGAGGAAACATGTGGCTCATGCCCAGCAGTTTTTTGATAAAGTTAAGAGTGGGTTTAATCCGAGTGTGAAAACTTACAGCATTTTGACGAGGGGTTGGGGCGATGTGGGTGACTCAAACAATGCCCAGAAGGTGTTTGATGAAATGCAGGAACGAGGTTGTTTGATTGATGTGCTTGCTTACAATAGTCTCTTGGAAGCTCTGTGCAAAGCTGGGAAAAGGGATGAAGCGTACAAGATGTTTCAGGAGATGGGTTCGAATGGCGTCGACCCAGATGCCGGTACGTATTCGATTTTCATCCGCTCAAGTTGTCAAGAGAATGATTTGCATACGGTTTATCGGGTCCTAGAAAGAATGAAGAGACACAACCTTTTCCCTAATGTGTTTACTTATAACTGTGTTATCAAGAAGCTTTGTAAAGATAAAAAGGTAGAAGAAGCCTACCAACTTTTGGATGAAATGATTGAGAGAGGAGTTACTCCAGATACATGGTCCTATAATGCAATCCAAGCTTATCATTGTGAGCACAGCGAGGTTAATAGTGCTCTTAACTTGATCAAGAGAATGGATAGAGACAATTGTGTTCCTGATAGACATACCTACAATATGGTTTTGAAATTGCTAGTAAGGGTGGGAAGATTTGACAGAGCCAATGAAGTCTGGGAGAGTATGGGAGAGAGAGAATTTTACCCTTCTGTTTCAACTTATGCTGTCATGATTCATGGTTTCTGCAAGAAAAAATGGAAGTTAGAAGAAGCATGCAAGTACTTTGAGATGATGATTGATGAGGGAATACCTCCATATATTTCTACTGTTGAGTTGTTGAGGAACCGACTTCTGGGGATAGGCTTCAAGGATCACATTGAGATACTTGGTGACAAGATGAGACGAAGCACTTCTTGCTCCATACAAGAGCTGGCAAACGTGATGAGTGGTGGCAAATGTCATGAGGTTCACCGCAAGTCCAAAAATGAAGAGACAGACTTTGAAAGTGACTGA

mRNA sequence

ATGCTCTCTCTTCGATCCATTCGAACTCGAAGAGCCTTCTCCTCCAAATTCCAATTTTCAAGAAAGAATGCTGACGACAGTCCTCTGCAACCTTGCTCTGTAATGGCCATTAGAGCCTTCTCCCCCAAATTCCAAATCTCCATTTCACTCTTCTGCTCTCTCTTAAAAACCAATCCTTTCCCTCACCAACGCCCATTCACTTCTCTCGCTACAGCAGCACAAGCAGGATCAGACTCACTGCTTCCATTCCTCGTCAGTGAGATATCTCGCATCCTCAGCGATCACAGAAGCCCTCACCATGACTTGGACCTCGGCCTCTCTTCCTTCTCCTCCAATGTATCCACTGACCTCGTCGAGCAGGTTCTCAAAAGGTGCAAGAATATCGGATTCTCCGCTCATAGGTTCTTCCTCTGGGCTAAAAGAATTCCGGGTTTTGAACCCAGCGCCGACAGCTATCGCATTCTCGTTGACATCTTGGGAAGCAGTGGGCAATTCGCTATCTTGTGGGATTTTCTTATAGAAATAAGGGAGACTCGGTGCTCTGTGATCACACATGAACTTTTCTGGCTTGTATTCAGAGCTTATAGCAGGACTGACTTGCCTCAAGATGCTATTCGGGCCTTCAATCGAATGGGGGAGTTCGGGATGAGGCCTGGTGTTGATGATCTTGATCAGCTCTTGTATATTCTATGCAAGAGGAAACATGTGGCTCATGCCCAGCAGTTTTTTGATAAAGTTAAGAGTGGGTTTAATCCGAGTGTGAAAACTTACAGCATTTTGACGAGGGGTTGGGGCGATGTGGGTGACTCAAACAATGCCCAGAAGGTGTTTGATGAAATGCAGGAACGAGGTTGTTTGATTGATGTGCTTGCTTACAATAGTCTCTTGGAAGCTCTGTGCAAAGCTGGGAAAAGGGATGAAGCGTACAAGATGTTTCAGGAGATGGGTTCGAATGGCGTCGACCCAGATGCCGGTACGTATTCGATTTTCATCCGCTCAAGTTGTCAAGAGAATGATTTGCATACGGTTTATCGGGTCCTAGAAAGAATGAAGAGACACAACCTTTTCCCTAATGTGTTTACTTATAACTGTGTTATCAAGAAGCTTTGTAAAGATAAAAAGGTAGAAGAAGCCTACCAACTTTTGGATGAAATGATTGAGAGAGGAGTTACTCCAGATACATGGTCCTATAATGCAATCCAAGCTTATCATTGTGAGCACAGCGAGGTTAATAGTGCTCTTAACTTGATCAAGAGAATGGATAGAGACAATTGTGTTCCTGATAGACATACCTACAATATGGTTTTGAAATTGCTAGTAAGGGTGGGAAGATTTGACAGAGCCAATGAAGTCTGGGAGAGTATGGGAGAGAGAGAATTTTACCCTTCTGTTTCAACTTATGCTGTCATGATTCATGGTTTCTGCAAGAAAAAATGGAAGTTAGAAGAAGCATGCAAGTACTTTGAGATGATGATTGATGAGGGAATACCTCCATATATTTCTACTGTTGAGTTGTTGAGGAACCGACTTCTGGGGATAGGCTTCAAGGATCACATTGAGATACTTGGTGACAAGATGAGACGAAGCACTTCTTGCTCCATACAAGAGCTGGCAAACGTGATGAGTGGTGGCAAATGTCATGAGGTTCACCGCAAGTCCAAAAATGAAGAGACAGACTTTGAAAGTGACTGA

Coding sequence (CDS)

ATGCTCTCTCTTCGATCCATTCGAACTCGAAGAGCCTTCTCCTCCAAATTCCAATTTTCAAGAAAGAATGCTGACGACAGTCCTCTGCAACCTTGCTCTGTAATGGCCATTAGAGCCTTCTCCCCCAAATTCCAAATCTCCATTTCACTCTTCTGCTCTCTCTTAAAAACCAATCCTTTCCCTCACCAACGCCCATTCACTTCTCTCGCTACAGCAGCACAAGCAGGATCAGACTCACTGCTTCCATTCCTCGTCAGTGAGATATCTCGCATCCTCAGCGATCACAGAAGCCCTCACCATGACTTGGACCTCGGCCTCTCTTCCTTCTCCTCCAATGTATCCACTGACCTCGTCGAGCAGGTTCTCAAAAGGTGCAAGAATATCGGATTCTCCGCTCATAGGTTCTTCCTCTGGGCTAAAAGAATTCCGGGTTTTGAACCCAGCGCCGACAGCTATCGCATTCTCGTTGACATCTTGGGAAGCAGTGGGCAATTCGCTATCTTGTGGGATTTTCTTATAGAAATAAGGGAGACTCGGTGCTCTGTGATCACACATGAACTTTTCTGGCTTGTATTCAGAGCTTATAGCAGGACTGACTTGCCTCAAGATGCTATTCGGGCCTTCAATCGAATGGGGGAGTTCGGGATGAGGCCTGGTGTTGATGATCTTGATCAGCTCTTGTATATTCTATGCAAGAGGAAACATGTGGCTCATGCCCAGCAGTTTTTTGATAAAGTTAAGAGTGGGTTTAATCCGAGTGTGAAAACTTACAGCATTTTGACGAGGGGTTGGGGCGATGTGGGTGACTCAAACAATGCCCAGAAGGTGTTTGATGAAATGCAGGAACGAGGTTGTTTGATTGATGTGCTTGCTTACAATAGTCTCTTGGAAGCTCTGTGCAAAGCTGGGAAAAGGGATGAAGCGTACAAGATGTTTCAGGAGATGGGTTCGAATGGCGTCGACCCAGATGCCGGTACGTATTCGATTTTCATCCGCTCAAGTTGTCAAGAGAATGATTTGCATACGGTTTATCGGGTCCTAGAAAGAATGAAGAGACACAACCTTTTCCCTAATGTGTTTACTTATAACTGTGTTATCAAGAAGCTTTGTAAAGATAAAAAGGTAGAAGAAGCCTACCAACTTTTGGATGAAATGATTGAGAGAGGAGTTACTCCAGATACATGGTCCTATAATGCAATCCAAGCTTATCATTGTGAGCACAGCGAGGTTAATAGTGCTCTTAACTTGATCAAGAGAATGGATAGAGACAATTGTGTTCCTGATAGACATACCTACAATATGGTTTTGAAATTGCTAGTAAGGGTGGGAAGATTTGACAGAGCCAATGAAGTCTGGGAGAGTATGGGAGAGAGAGAATTTTACCCTTCTGTTTCAACTTATGCTGTCATGATTCATGGTTTCTGCAAGAAAAAATGGAAGTTAGAAGAAGCATGCAAGTACTTTGAGATGATGATTGATGAGGGAATACCTCCATATATTTCTACTGTTGAGTTGTTGAGGAACCGACTTCTGGGGATAGGCTTCAAGGATCACATTGAGATACTTGGTGACAAGATGAGACGAAGCACTTCTTGCTCCATACAAGAGCTGGCAAACGTGATGAGTGGTGGCAAATGTCATGAGGTTCACCGCAAGTCCAAAAATGAAGAGACAGACTTTGAAAGTGACTGA

Protein sequence

MLSLRSIRTRRAFSSKFQFSRKNADDSPLQPCSVMAIRAFSPKFQISISLFCSLLKTNPFPHQRPFTSLATAAQAGSDSLLPFLVSEISRILSDHRSPHHDLDLGLSSFSSNVSTDLVEQVLKRCKNIGFSAHRFFLWAKRIPGFEPSADSYRILVDILGSSGQFAILWDFLIEIRETRCSVITHELFWLVFRAYSRTDLPQDAIRAFNRMGEFGMRPGVDDLDQLLYILCKRKHVAHAQQFFDKVKSGFNPSVKTYSILTRGWGDVGDSNNAQKVFDEMQERGCLIDVLAYNSLLEALCKAGKRDEAYKMFQEMGSNGVDPDAGTYSIFIRSSCQENDLHTVYRVLERMKRHNLFPNVFTYNCVIKKLCKDKKVEEAYQLLDEMIERGVTPDTWSYNAIQAYHCEHSEVNSALNLIKRMDRDNCVPDRHTYNMVLKLLVRVGRFDRANEVWESMGEREFYPSVSTYAVMIHGFCKKKWKLEEACKYFEMMIDEGIPPYISTVELLRNRLLGIGFKDHIEILGDKMRRSTSCSIQELANVMSGGKCHEVHRKSKNEETDFESD
Homology
[Close]
BLAST of Lsi07G004730 vs. Swiss-Prot
Match: PPR78_ARATH (Pentatricopeptide repeat-containing protein At1g52640, mitochondrial OS=Arabidopsis thaliana GN=At1g52640 PE=2 SV=1)

HSP 1 Score: 646.4 bits (1666), Expect = 3.0e-184
Identity = 315/526 (59.89%), Postives = 400/526 (76.05%), Query Frame = 1 

Query: 35  MAIRAFSPKFQISISLFCSLLKTNPFPHQRPFTSLATAAQAGSDSLLPFLVSEISRILSD 94
           MAIR  S       SL  +L +T      R F++L        D   P LV+EISR+LSD
Sbjct: 1   MAIRTVS-------SLVRALYQTPKSQSFRIFSTLL------HDPPSPDLVNEISRVLSD 60

Query: 95  HRSPHHDLDLGLSSFSSNVSTDLVEQVLKRCKNIGFSAHRFFLWAKRIPGFEPSADSYRI 154
           HR+P  DL+  L ++S  VS++LVEQVLKRCKN+GF AHRFFLWA+RIP F  S +SY I
Sbjct: 61  HRNPKDDLEHTLVAYSPRVSSNLVEQVLKRCKNLGFPAHRFFLWARRIPDFAHSLESYHI 120

Query: 155 LVDILGSSGQFAILWDFLIEIRETRCSVITHELFWLVFRAYSRTDLPQDAIRAFNRMGEF 214
           LV+ILGSS QFA+LWDFLIE RE     I+ ++FW+VFRAYSR +LP +A RAFNRM EF
Sbjct: 121 LVEILGSSKQFALLWDFLIEAREYNYFEISSKVFWIVFRAYSRANLPSEACRAFNRMVEF 180

Query: 215 GMRPGVDDLDQLLYILCKRKHVAHAQQFFDKVKS-GFNPSVKTYSILTRGWGDVGDSNNA 274
           G++P VDDLDQLL+ LC +KHV HAQ+FF K K  G  PS KTYSIL RGW  + D++ A
Sbjct: 181 GIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGWARIRDASGA 240

Query: 275 QKVFDEMQERGCLIDVLAYNSLLEALCKAGKRDEAYKMFQEMGSNGVDPDAGTYSIFIRS 334
           +KVFDEM ER C++D+LAYN+LL+ALCK+G  D  YKMFQEMG+ G+ PDA +++IFI +
Sbjct: 241 RKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHA 300

Query: 335 SCQENDLHTVYRVLERMKRHNLFPNVFTYNCVIKKLCKDKKVEEAYQLLDEMIERGVTPD 394
            C   D+H+ Y+VL+RMKR++L PNV+T+N +IK LCK++KV++AY LLDEMI++G  PD
Sbjct: 301 YCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPD 360

Query: 395 TWSYNAIQAYHCEHSEVNSALNLIKRMDRDNCVPDRHTYNMVLKLLVRVGRFDRANEVWE 454
           TW+YN+I AYHC+H EVN A  L+ RMDR  C+PDRHTYNMVLKLL+R+GRFDRA E+WE
Sbjct: 361 TWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWE 420

Query: 455 SMGEREFYPSVSTYAVMIHGFCKKKWKLEEACKYFEMMIDEGIPPYISTVELLRNRLLGI 514
            M ER+FYP+V+TY VMIHG  +KK KLEEAC+YFEMMIDEGIPPY +TVE+LRNRL+G 
Sbjct: 421 GMSERKFYPTVATYTVMIHGLVRKKGKLEEACRYFEMMIDEGIPPYSTTVEMLRNRLVGW 480

Query: 515 GFKDHIEILGDKMRRSTSCSIQELANVMSGGKCHEVHRKSKNEETD 560
           G  D +++L  KM RS+SCS+Q++A V   GK   + R+S+N E D
Sbjct: 481 GQMDVVDVLAGKMERSSSCSVQDMA-VEMRGKRRRLGRRSENSEDD 512

[Close]
BLAST of Lsi07G004730 vs. Swiss-Prot
Match: PP129_ARATH (Pentatricopeptide repeat-containing protein At1g77360, mitochondrial OS=Arabidopsis thaliana GN=At1g77360 PE=2 SV=2)

HSP 1 Score: 265.0 bits (676), Expect = 1.9e-69
Identity = 143/443 (32.28%), Postives = 243/443 (54.85%), Query Frame = 1 

Query: 84  LVSEISRILSDHRSPHHDLDLGLSSFSSNVSTDLVEQVLKRCKNIGFSAHRFFLWAKRIP 143
           +   IS++L    SP   LD  L      VS ++VE VL R +N G   +RFF W+++  
Sbjct: 71  VAKNISKVLMS--SPQLVLDSALDQSGLRVSQEVVEDVLNRFRNAGLLTYRFFQWSEKQR 130

Query: 144 GFEPSADSYRILVDILGSSGQFAILWDFLIEIRETRCSVITHELFWLVFRAYSRTDLPQD 203
            +E S  +Y ++++      Q+ ++WD +  +R+ +  ++  E F +V R Y+R     +
Sbjct: 131 HYEHSVRAYHMMIESTAKIRQYKLMWDLINAMRKKK--MLNVETFCIVMRKYARAQKVDE 190

Query: 204 AIRAFNRMGEFGMRPGVDDLDQLLYILCKRKHVAHAQQFFDKVKSGFNPSVKTYSILTRG 263
           AI AFN M ++ + P +   + LL  LCK K+V  AQ+ F+ ++  F P  KTYSIL  G
Sbjct: 191 AIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDRFTPDSKTYSILLEG 250

Query: 264 WGDVGDSNNAQKVFDEMQERGCLIDVLAYNSLLEALCKAGKRDEAYKMFQEMGSNGVDPD 323
           WG   +   A++VF EM + GC  D++ Y+ +++ LCKAG+ DEA  + + M  +   P 
Sbjct: 251 WGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPT 310

Query: 324 AGTYSIFIRSSCQENDLHTVYRVLERMKRHNLFPNVFTYNCVIKKLCKDKKVEEAYQLLD 383
              YS+ + +   EN L         M+R  +  +V  +N +I   CK  +++  Y++L 
Sbjct: 311 TFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLK 370

Query: 384 EMIERGVTPDTWSYNAIQAYHCEHSEVNSALNLIKRMDRDNCVPDRHTYNMVLKLLVRVG 443
           EM  +GVTP++ S N I  +  E  E + A ++ ++M +  C PD  TY MV+K+     
Sbjct: 371 EMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIK-VCEPDADTYTMVIKMFCEKK 430

Query: 444 RFDRANEVWESMGEREFYPSVSTYAVMIHGFCKKKWKLEEACKYFEMMIDEGIPPYISTV 503
             + A++VW+ M ++  +PS+ T++V+I+G C+++   ++AC   E MI+ GI P   T 
Sbjct: 431 EMETADKVWKYMRKKGVFPSMHTFSVLINGLCEER-TTQKACVLLEEMIEMGIRPSGVTF 490

Query: 504 ELLRNRLLGIGFKDHIEILGDKM 527
             LR  L+    +D ++ L +KM
Sbjct: 491 GRLRQLLIKEEREDVLKFLNEKM 507

[Close]
BLAST of Lsi07G004730 vs. Swiss-Prot
Match: PP275_ARATH (Pentatricopeptide repeat-containing protein At3g49730 OS=Arabidopsis thaliana GN=At3g49730 PE=2 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 1.4e-64
Identity = 132/430 (30.70%), Postives = 226/430 (52.56%), Query Frame = 1 

Query: 85  VSEISRILSDHRSPHHDLDLGLSSFSSNVSTDLVEQVLKRCKNIGFSAHRFFLWAKRIPG 144
           V +I RIL +H S    L+L L+    ++   L+ +VL RC + G   +RFFLWA + PG
Sbjct: 67  VEKIYRILRNHHSRVPKLELALNESGIDLRPGLIIRVLSRCGDAGNLGYRFFLWATKQPG 126

Query: 145 FEPSADSYRILVDILGSSGQFAILWDFLIEIRETRCSVITHELFWLVFRAYSRTDLPQDA 204
           +  S +  + +V IL    QF  +W  + E+R+T   +I  ELF ++ R ++  ++ + A
Sbjct: 127 YFHSYEVCKSMVMILSKMRQFGAVWGLIEEMRKTNPELIEPELFVVLMRRFASANMVKKA 186

Query: 205 IRAFNRMGEFGMRPGVDDLDQLLYILCKRKHVAHAQQFFDKVKSGFNPSVKTYSILTRGW 264
           +   + M ++G+ P       LL  LCK   V  A + F+ ++  F P+++ ++ L  GW
Sbjct: 187 VEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMREKFPPNLRYFTSLLYGW 246

Query: 265 GDVGDSNNAQKVFDEMQERGCLIDVLAYNSLLEALCKAGKRDEAYKMFQEMGSNGVDPDA 324
              G    A++V  +M+E G   D++ + +LL     AGK  +AY +  +M   G +P+ 
Sbjct: 247 CREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNV 306

Query: 325 GTYSIFIRSSCQ-ENDLHTVYRVLERMKRHNLFPNVFTYNCVIKKLCKDKKVEEAYQLLD 384
             Y++ I++ C+ E  +    RV   M+R+    ++ TY  +I   CK   +++ Y +LD
Sbjct: 307 NCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLD 366

Query: 385 EMIERGVTPDTWSYNAIQAYHCEHSEVNSALNLIKRMDRDNCVPDRHTYNMVLKLLVRVG 444
           +M ++GV P   +Y  I   H +  +    L LI++M R  C PD   YN+V++L  ++G
Sbjct: 367 DMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLG 426

Query: 445 RFDRANEVWESMGEREFYPSVSTYAVMIHGFCKKKWKLEEACKYFEMMIDEGI--PPYIS 504
               A  +W  M      P V T+ +MI+GF  + + L EAC +F+ M+  GI   P   
Sbjct: 427 EVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGF-LIEACNHFKEMVSRGIFSAPQYG 486

Query: 505 TVELLRNRLL 512
           T++ L N L+
Sbjct: 487 TLKSLLNNLV 495

[Close]
BLAST of Lsi07G004730 vs. Swiss-Prot
Match: PP112_ARATH (Pentatricopeptide repeat-containing protein At1g71060, mitochondrial OS=Arabidopsis thaliana GN=At1g71060 PE=2 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 6.0e-60
Identity = 133/424 (31.37%), Postives = 217/424 (51.18%), Query Frame = 1 

Query: 106 LSSFSSNVSTDLVEQVLKRCKNIGFSAHRFFLWAKRIPGFEPSADSYRILVDILGSSGQF 165
           L+  S  +S  L+E+VLK+  N G  A   F WA+   GF+ +  +Y  L++ LG   QF
Sbjct: 85  LNEASVKLSPALIEEVLKKLSNAGVLALSVFKWAENQKGFKHTTSNYNALIESLGKIKQF 144

Query: 166 AILWDFLIEIRETRCSVITHELFWLVFRAYSRTDLPQDAIRAFNRMGEFGMRPGVDDLDQ 225
            ++W  + +++  +  +++ E F L+ R Y+R    ++AI AF++M EFG +    D ++
Sbjct: 145 KLIWSLVDDMKAKK--LLSKETFALISRRYARARKVKEAIGAFHKMEEFGFKMESSDFNR 204

Query: 226 LLYILCKRKHVAHAQQFFDKVKSG-FNPSVKTYSILTRGWGDVGDSNNAQKVFDEMQERG 285
           +L  L K ++V  AQ+ FDK+K   F P +K+Y+IL  GWG   +     +V  EM++ G
Sbjct: 205 MLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEG 264

Query: 286 CLIDVLAYNSLLEALCKAGKRDEAYKMFQEMGSNGVDPDAGTYSIFIRSSCQENDLHTVY 345
              DV+AY  ++ A CKA K +EA + F EM      P    +   I     E  L+   
Sbjct: 265 FEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDAL 324

Query: 346 RVLERMKRHNLFPNVFTYNCVIKKLCKDKKVEEAYQLLDEMIERGVTPDTWSYNAIQAYH 405
              ER K         TYN ++   C  +++E+AY+ +DEM  +GV P+  +Y+ I  + 
Sbjct: 325 EFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHL 384

Query: 406 CEHSEVNSALNLIKRMDRDNCVPDRHTYNMVLKLLVRVGRFDRANEVWESMGEREFYPSV 465
                   A  + + M   +C P   TY +++++     R D A ++W+ M  +   P +
Sbjct: 385 IRMQRSKEAYEVYQTM---SCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGM 444

Query: 466 STYAVMIHGFCKKKWKLEEACKYFEMMIDEGIPPYISTVELLRNRLLGIGFKDHIEILGD 525
             ++ +I   C +  KL+EAC+YF  M+D GI P       L+  LL  G KD +  L  
Sbjct: 445 HMFSSLITALCHEN-KLDEACEYFNEMLDVGIRPPGHMFSRLKQTLLDEGRKDKVTDLVV 502

Query: 526 KMRR 529
           KM R
Sbjct: 505 KMDR 502

[Close]
BLAST of Lsi07G004730 vs. Swiss-Prot
Match: PP447_ARATH (Putative pentatricopeptide repeat-containing protein At5g65820 OS=Arabidopsis thaliana GN=At5g65820 PE=3 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 3.0e-59
Identity = 127/429 (29.60%), Postives = 219/429 (51.05%), Query Frame = 1 

Query: 85  VSEISRILSDHRSPHHDLDLGLSSFSSNVSTDLVEQVLKRCKNIGFSAHRFFLWAKRIPG 144
           V +  RIL    S    L+L L+     +   L+E+VL RC + G   +RFF+WA + P 
Sbjct: 83  VEKSYRILRKFHSRVPKLELALNESGVELRPGLIERVLNRCGDAGNLGYRFFVWAAKQPR 142

Query: 145 FEPSADSYRILVDILGSSGQFAILWDFLIEIRETRCSVITHELFWLVFRAYSRTDLPQDA 204
           +  S + Y+ +V IL    QF  +W  + E+R+    +I  ELF ++ + ++  D+ + A
Sbjct: 143 YCHSIEVYKSMVKILSKMRQFGAVWGLIEEMRKENPQLIEPELFVVLVQRFASADMVKKA 202

Query: 205 IRAFNRMGEFGMRPGVDDLDQLLYILCKRKHVAHAQQFFDKVKSGFNPSVKTYSILTRGW 264
           I   + M +FG  P       LL  LCK   V  A + F+ ++  F  +++ ++ L  GW
Sbjct: 203 IEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMRFPVNLRYFTSLLYGW 262

Query: 265 GDVGDSNNAQKVFDEMQERGCLIDVLAYNSLLEALCKAGKRDEAYKMFQEMGSNGVDPDA 324
             VG    A+ V  +M E G   D++ Y +LL     AGK  +AY + ++M   G +P+A
Sbjct: 263 CRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNA 322

Query: 325 GTYSIFIRSSCQENDLHTVYRVLERMKRHNLFPNVFTYNCVIKKLCKDKKVEEAYQLLDE 384
             Y++ I++ C+ + +    +V   M+R+    +V TY  ++   CK  K+++ Y +LD+
Sbjct: 323 NCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDD 382

Query: 385 MIERGVTPDTWSYNAIQAYHCEHSEVNSALNLIKRMDRDNCVPDRHTYNMVLKLLVRVGR 444
           MI++G+ P   +Y  I   H +       L L+++M +    PD   YN+V++L  ++G 
Sbjct: 383 MIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGE 442

Query: 445 FDRANEVWESMGEREFYPSVSTYAVMIHGFCKKKWKLEEACKYFEMMIDEGI--PPYIST 504
              A  +W  M E    P V T+ +MI+G   +   L EA  +F+ M+  G+       T
Sbjct: 443 VKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLL-EASDHFKEMVTRGLFSVSQYGT 502

Query: 505 VELLRNRLL 512
           ++LL N +L
Sbjct: 503 LKLLLNTVL 510

[Close]
BLAST of Lsi07G004730 vs. TrEMBL
Match: A0A0A0KYE8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G004910 PE=4 SV=1)

HSP 1 Score: 952.6 bits (2461), Expect = 2.2e-274
Identity = 465/529 (87.90%), Postives = 487/529 (92.06%), Query Frame = 1 

Query: 35  MAIRAFSPKFQISISLFCSLLKTNPFPHQRPFTSLATAAQAGSDSLLPFLVSEISRILSD 94
           MAIRA S KF+ISISLF SLL+TN F HQR FTS AT A+AGSD  LPFLVSEISRILSD
Sbjct: 1   MAIRACSSKFRISISLFSSLLRTNRFAHQRSFTSFATEARAGSDPTLPFLVSEISRILSD 60

Query: 95  HRSPHHDLDLGLSSFSSNVSTDLVEQVLKRCKNIGFSAHRFFLWAKRIPGFEPSADSYRI 154
            R+PHHDL++GLSSFSSNVSTDLVEQVLKRCKNI FSAHRFFLWAKRIPGFEPS DSY I
Sbjct: 61  RRNPHHDLEVGLSSFSSNVSTDLVEQVLKRCKNIAFSAHRFFLWAKRIPGFEPSDDSYHI 120

Query: 155 LVDILGSSGQFAILWDFLIEIRETRCSVITHELFWLVFRAYSRTDLPQDAIRAFNRMGEF 214
           +VDILGSSGQFAILWDFLIEIRETR SVITHELFW VF AYSR DLPQDAIRAFNRMGEF
Sbjct: 121 VVDILGSSGQFAILWDFLIEIRETRSSVITHELFWHVFTAYSRADLPQDAIRAFNRMGEF 180

Query: 215 GMRPGVDDLDQLLYILCKRKHVAHAQQFFDKVKSGFNPSVKTYSILTRGWGDVGDSNNAQ 274
           G+R GVDDLD+LLY LCKRKHVAHAQQFFDKVKS FNPSVKTYSILTRGWG VGDSNNAQ
Sbjct: 181 GIRAGVDDLDKLLYTLCKRKHVAHAQQFFDKVKSVFNPSVKTYSILTRGWGVVGDSNNAQ 240

Query: 275 KVFDEMQERGCLIDVLAYNSLLEALCKAGKRDEAYKMFQEMGSNGVDPDAGTYSIFIRSS 334
           KVFDEM+ERGCLIDVLAYNSLLEALCK GKRDEAYKMF EM SNGVDPDA TYSIFIRSS
Sbjct: 241 KVFDEMRERGCLIDVLAYNSLLEALCKGGKRDEAYKMFLEMDSNGVDPDADTYSIFIRSS 300

Query: 335 CQENDLHTVYRVLERMKRHNLFPNVFTYNCVIKKLCKDKKVEEAYQLLDEMIERGVTPDT 394
           CQENDLHTVYRVLER KR NL PNVFTYNCVIKKLCKD+ VEEAYQ+LDEMIERGVTPDT
Sbjct: 301 CQENDLHTVYRVLERTKRKNLLPNVFTYNCVIKKLCKDQNVEEAYQILDEMIERGVTPDT 360

Query: 395 WSYNAIQAYHCEHSEVNSALNLIKRMDRDNCVPDRHTYNMVLKLLVRVGRFDRANEVWES 454
           WSYNAIQAYHC+HSEVNSALNL+KRMDRD CVPD+HTYNMVLKLLVRVGRFDRANEVWES
Sbjct: 361 WSYNAIQAYHCDHSEVNSALNLVKRMDRDKCVPDKHTYNMVLKLLVRVGRFDRANEVWES 420

Query: 455 MGEREFYPSVSTYAVMIHGFCKKKWKLEEACKYFEMMIDEGIPPYISTVELLRNRLLGIG 514
           MG+R FYPSVSTYAVMIHGFCKKKWKLEEACKYFEMMIDEGIPPYI+TVELLR+RLLGIG
Sbjct: 421 MGKRGFYPSVSTYAVMIHGFCKKKWKLEEACKYFEMMIDEGIPPYIATVELLRDRLLGIG 480

Query: 515 FKDHIEILGDKMRRSTSCSIQELANVMSGGKCHEVHRKSKNEETDFESD 564
           FKD + ILGDKM+RSTSCSIQELAN+MSGGK  E     KNEET+ ESD
Sbjct: 481 FKDQVAILGDKMKRSTSCSIQELANLMSGGKRREAQSMLKNEETEHESD 529

[Close]
BLAST of Lsi07G004730 vs. TrEMBL
Match: M5WV46_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa004160mg PE=4 SV=1)

HSP 1 Score: 748.4 bits (1931), Expect = 6.2e-213
Identity = 358/530 (67.55%), Postives = 429/530 (80.94%), Query Frame = 1 

Query: 35  MAIRAFSPKFQISISLFCSLLKT-NPFPHQRPFTSLATAAQAGSDSLLPFLVSEISRILS 94
           M++R+ + K +   S+F SLL +  P  H  PF+SL         S  P LV+EISRILS
Sbjct: 1   MSLRSLNSKPKTLHSIFHSLLSSPKPNTHYNPFSSLTYQNPPPPPS--PHLVNEISRILS 60

Query: 95  DHRSPHHDLDLGLSSFSSNVSTDLVEQVLKRCKNIGFSAHRFFLWAKRIPGFEPSADSYR 154
           DHR+ HHDL+  L+   + +ST+LVEQVLKRCKN+G SAHRFFLWAK IPGF+ S +SY 
Sbjct: 61  DHRNAHHDLEHSLNPLCTQISTNLVEQVLKRCKNLGLSAHRFFLWAKTIPGFQHSFESYH 120

Query: 155 ILVDILGSSGQFAILWDFLIEIRETRCSVITHELFWLVFRAYSRTDLPQDAIRAFNRMGE 214
           IL++ILGSS Q+A+LWDFLIE+RE++C  I  E+FWL+FR YSR +LP+DAIRAFNRM E
Sbjct: 121 ILIEILGSSKQYAVLWDFLIEVRESKCIEIVPEVFWLIFRVYSRANLPRDAIRAFNRMVE 180

Query: 215 FGMRPGVDDLDQLLYILCKRKHVAHAQQFFDKVKSGFNPSVKTYSILTRGWGDVGDSNNA 274
           FG++P V DLDQL+Y LCKRKHV +A +FFDKVKSGF  + K YSIL RGWGD+GDS+ A
Sbjct: 181 FGIKPSVLDLDQLMYTLCKRKHVKYAHEFFDKVKSGFELNAKIYSILMRGWGDIGDSDEA 240

Query: 275 QKVFDEMQERGCLIDVLAYNSLLEALCKAGKRDEAYKMFQEMGSNGVDPDAGTYSIFIRS 334
           +K+FDEM ERGCL+DV AYNS LEALCK GK DEAYK+F+ MGSNG DPDA TYSIFIR+
Sbjct: 241 RKLFDEMTERGCLVDVPAYNSYLEALCKGGKVDEAYKIFRGMGSNGTDPDACTYSIFIRA 300

Query: 335 SCQENDLHTVYRVLERMKRHNLFPNVFTYNCVIKKLCKDKKVEEAYQLLDEMIERGVTPD 394
            C+ ND+H+V+RVL+RMKR+NL PNV++YNC+IKKLCK+ KVEEAY+LLDEMIERGV PD
Sbjct: 301 YCEANDIHSVFRVLDRMKRYNLLPNVYSYNCIIKKLCKNDKVEEAYELLDEMIERGVMPD 360

Query: 395 TWSYNAIQAYHCEHSEVNSALNLIKRMDRDNCVPDRHTYNMVLKLLVRVGRFDRANEVWE 454
            WSYNAIQA+HC+H EVN AL L+ RM +DNC PDRHTYNMVLKLL+R+GRFDRA EVWE
Sbjct: 361 AWSYNAIQAHHCDHCEVNRALRLLSRMKKDNCKPDRHTYNMVLKLLIRIGRFDRATEVWE 420

Query: 455 SMGEREFYPSVSTYAVMIHGFCKKKWKLEEACKYFEMMIDEGIPPYISTVELLRNRLLGI 514
           SMGER FYPSVSTY+VMIHG CKKK KLEEACKYFE+MIDEGIPPY STVE+L+NRL G+
Sbjct: 421 SMGERGFYPSVSTYSVMIHGLCKKKHKLEEACKYFEIMIDEGIPPYFSTVEMLKNRLRGL 480

Query: 515 GFKDHIEILGDKMRRSTSCSIQELANVMSGGKCHEVHRKSKNEETDFESD 564
           G  +H EIL  KM +ST CSIQE+AN+M G K +  +R    E TD ESD
Sbjct: 481 GLLEHTEILASKMEQSTCCSIQEMANLMRGNKTYVTYR---IEHTDNESD 525

[Close]
BLAST of Lsi07G004730 vs. TrEMBL
Match: B9SY25_RICCO (Pentatricopeptide repeat-containing protein, putative OS=Ricinus communis GN=RCOM_0436810 PE=4 SV=1)

HSP 1 Score: 744.2 bits (1920), Expect = 1.2e-211
Identity = 361/529 (68.24%), Postives = 431/529 (81.47%), Query Frame = 1 

Query: 35  MAIRAFSPKFQISISLFCSLLKTNPFPHQRPFTSLATAAQAGSDSLLPFLVSEISRILSD 94
           MA+R+   K +   SLF  LL +  +       +L++ A    +   P LV+EISRILSD
Sbjct: 1   MAVRSLISKPRPLCSLFSYLLNSKSY-------TLSSLAPRTKNLPSPDLVNEISRILSD 60

Query: 95  HRSPHHDLDLGLSSFSSNVSTDLVEQVLKRCKNIGFSAHRFFLWAKRIPGFEPSADSYRI 154
           HR+PHHDL+L L+++SS++ST LVEQVLKRCKN+GFSA RFFLWAKRIPGF+ S +SY I
Sbjct: 61  HRNPHHDLELSLTTYSSHISTTLVEQVLKRCKNLGFSAQRFFLWAKRIPGFDHSKESYHI 120

Query: 155 LVDILGSSGQFAILWDFLIEIRETRCSVITHELFWLVFRAYSRTDLPQDAIRAFNRMGEF 214
           LVDILGSS QFA+LWDFLIEIRE++   I+ ++FWLVFRAYSR +LP DAIRAF+RM EF
Sbjct: 121 LVDILGSSKQFALLWDFLIEIRESQDFEISPQVFWLVFRAYSRANLPSDAIRAFDRMVEF 180

Query: 215 GMRPGVDDLDQLLYILCKRKHVAHAQQFFDKVKSGFNPSVKTYSILTRGWGDVGDSNNAQ 274
           G++P +DDLDQLLY+LCKRKH  HAQQ FD+VK  F    KTYSIL RGWGD+G+S +A 
Sbjct: 181 GLKPTIDDLDQLLYVLCKRKHAKHAQQIFDRVKHQFQTRAKTYSILVRGWGDIGESVSAC 240

Query: 275 KVFDEMQERGCLIDVLAYNSLLEALCKAGKRDEAYKMFQEMGSNGVDPDAGTYSIFIRSS 334
           KVFDEM+E+ C +DVLAYNSLLEA CK GK  EAYKMF+EMGSNG+ PDA T+SIFIR+ 
Sbjct: 241 KVFDEMREQQCAVDVLAYNSLLEAFCKGGKVSEAYKMFREMGSNGIKPDACTFSIFIRAY 300

Query: 335 CQENDLHTVYRVLERMKRHNLFPNVFTYNCVIKKLCKDKKVEEAYQLLDEMIERGVTPDT 394
           C+ ND+H  YRVL+ MKR++L PNVFTYNC+IKKLCK +KVEEAYQLL+E+IER   PD 
Sbjct: 301 CEANDIHLAYRVLDEMKRYDLVPNVFTYNCMIKKLCKKEKVEEAYQLLNEIIERSGQPDA 360

Query: 395 WSYNAIQAYHCEHSEVNSALNLIKRMDRDNCVPDRHTYNMVLKLLVRVGRFDRANEVWES 454
           WSYNAI AYHCEHSEVNSA  LI RM +DNC+PD+H+YNM+LKLL+RVGRFDRA EVWES
Sbjct: 361 WSYNAILAYHCEHSEVNSATRLISRMVKDNCLPDKHSYNMLLKLLIRVGRFDRAIEVWES 420

Query: 455 MGEREFYPSVSTYAVMIHGFCKKKWKLEEACKYFEMMIDEGIPPYISTVELLRNRLLGIG 514
           MGE+ FYPSVSTY+VM+HG CKKK KLEEACKYFEMMIDEGIPPY STVE+LRNRL+G+G
Sbjct: 421 MGEKGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMIDEGIPPYSSTVEILRNRLIGLG 480

Query: 515 FKDHIEILGDKMRRSTSCSIQELANVMSGGKCHEVHRKSKNEETDFESD 564
             D+IEIL  KM  ST+CSIQELA  M GGK   VH +S++EET+ ESD
Sbjct: 481 LLDYIEILAGKMEHSTACSIQELAIAMRGGK---VHVRSRSEETESESD 519

[Close]
BLAST of Lsi07G004730 vs. TrEMBL
Match: B9H3Q3_POPTR (Pentatricopeptide repeat-containing family protein OS=Populus trichocarpa GN=POPTR_0004s10260g PE=4 SV=2)

HSP 1 Score: 739.2 bits (1907), Expect = 3.8e-210
Identity = 358/529 (67.67%), Postives = 426/529 (80.53%), Query Frame = 1 

Query: 35  MAIRAFSPKFQISISLFCSLLKTNPFPHQRPFTSLATAAQAGSDSLLPFLVSEISRILSD 94
           MA+R+ + K +   SLF SL  +    H+ P ++L    Q      LP LV+EISRILSD
Sbjct: 1   MAMRSLTSKTRTLHSLFQSLCTSKSHSHRHPLSTLTPLNQIPP---LPGLVNEISRILSD 60

Query: 95  HRSPHHDLDLGLSSFSSNVSTDLVEQVLKRCKNIGFSAHRFFLWAKRIPGFEPSADSYRI 154
            R+PHHDL+  L++FSS +ST+LVEQVLKRCKN+GFSAHRFFLWAKRIPGFE S +SY I
Sbjct: 61  QRNPHHDLETSLNAFSSEISTNLVEQVLKRCKNLGFSAHRFFLWAKRIPGFEHSEESYHI 120

Query: 155 LVDILGSSGQFAILWDFLIEIRETRCSVITHELFWLVFRAYSRTDLPQDAIRAFNRMGEF 214
           LV+ILG+S QFAILWDFLIE+RE+    I  E+ WLVFR+YSR +LP DAIRAF+RM EF
Sbjct: 121 LVNILGTSRQFAILWDFLIEMRESHDFEINQEIIWLVFRSYSRANLPSDAIRAFDRMAEF 180

Query: 215 GMRPGVDDLDQLLYILCKRKHVAHAQQFFDKVKSGFNPSVKTYSILTRGWGDVGDSNNAQ 274
           G+RP VDDLD+LLY+LCK KHV  AQQFFD+VK  F    KTYSIL RGWGD+G++  A+
Sbjct: 181 GLRPSVDDLDKLLYVLCKCKHVKCAQQFFDRVKHKFEAKAKTYSILVRGWGDIGEAVEAR 240

Query: 275 KVFDEMQERGCLIDVLAYNSLLEALCKAGKRDEAYKMFQEMGSNGVDPDAGTYSIFIRSS 334
           KVFDEM  RGC +DVLAYNSLLEALCK G  DEAYKMF+E+GS+GV+PDA +Y+IFIR+ 
Sbjct: 241 KVFDEMLGRGCALDVLAYNSLLEALCKGGNVDEAYKMFREIGSHGVEPDACSYAIFIRAY 300

Query: 335 CQENDLHTVYRVLERMKRHNLFPNVFTYNCVIKKLCKDKKVEEAYQLLDEMIERGVTPDT 394
           C+ N++H+V+ VL+RMKR++L PNVFTYNC+IKKLCK+ KVE+AYQLL EM+ERGV+PD 
Sbjct: 301 CEANNIHSVFSVLDRMKRYDLVPNVFTYNCIIKKLCKNGKVEDAYQLLHEMMERGVSPDA 360

Query: 395 WSYNAIQAYHCEHSEVNSALNLIKRMDRDNCVPDRHTYNMVLKLLVRVGRFDRANEVWES 454
           WSYN I AYHCEHSEVN A  LI  M +DNC+PDRH+YNM+LKLLVRVGRFDRA E+WES
Sbjct: 361 WSYNTILAYHCEHSEVNRATKLISIMVKDNCLPDRHSYNMLLKLLVRVGRFDRATEIWES 420

Query: 455 MGEREFYPSVSTYAVMIHGFCKKKWKLEEACKYFEMMIDEGIPPYISTVELLRNRLLGIG 514
           MGER FYPSVSTY+VMIHG CKKK KLEEAC+YFE MIDEGIPPY ST+E+LRNRL+G G
Sbjct: 421 MGERGFYPSVSTYSVMIHGLCKKKGKLEEACRYFETMIDEGIPPYASTIEMLRNRLIGFG 480

Query: 515 FKDHIEILGDKMRRSTSCSIQELANVMSGGKCHEVHRKSKNEETDFESD 564
             DHIEIL  KM R TSCSIQELA  M G K      +S+NEET+ ES+
Sbjct: 481 LLDHIEILACKMERGTSCSIQELAKEMRGNKACV---RSRNEETELESE 523

[Close]
BLAST of Lsi07G004730 vs. TrEMBL
Match: A0A067LL05_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01534 PE=4 SV=1)

HSP 1 Score: 732.6 bits (1890), Expect = 3.5e-208
Identity = 355/529 (67.11%), Postives = 424/529 (80.15%), Query Frame = 1 

Query: 35  MAIRAFSPKFQISISLFCSLLKTNPFPHQRPFTSLATAAQAGSDSLLPFLVSEISRILSD 94
           MA+ + + K +   S F S+L+  P      F S +      +   LP LV+EISRILSD
Sbjct: 1   MALGSLASKTKSFCSYFRSVLRVRP-----KFHSFSILTPQNTKLPLPDLVNEISRILSD 60

Query: 95  HRSPHHDLDLGLSSFSSNVSTDLVEQVLKRCKNIGFSAHRFFLWAKRIPGFEPSADSYRI 154
           HR+PHHDL+L LS++S  VS +LVEQVLKRCKN+GFSAHRFFLWAKRIPGFE S +SY I
Sbjct: 61  HRNPHHDLELSLSTYSLKVSPNLVEQVLKRCKNLGFSAHRFFLWAKRIPGFEHSKESYHI 120

Query: 155 LVDILGSSGQFAILWDFLIEIRETRCSVITHELFWLVFRAYSRTDLPQDAIRAFNRMGEF 214
           LVDILGSS QFAILWDFL+E+RE +   IT E+FWLVFRAYSR +LP DAIRAF+RM EF
Sbjct: 121 LVDILGSSKQFAILWDFLMEMREFQDCKITPEIFWLVFRAYSRANLPGDAIRAFDRMVEF 180

Query: 215 GMRPGVDDLDQLLYILCKRKHVAHAQQFFDKVKSGFNPSVKTYSILTRGWGDVGDSNNAQ 274
           G+ PG+DDLD+L+Y LCKRKHV  AQQFFD+VK  +    KTYSIL RGWGDVG+S  A 
Sbjct: 181 GLNPGMDDLDRLVYALCKRKHVRLAQQFFDRVKHRYEAKAKTYSILIRGWGDVGESELAC 240

Query: 275 KVFDEMQERGCLIDVLAYNSLLEALCKAGKRDEAYKMFQEMGSNGVDPDAGTYSIFIRSS 334
           +VFDEM +R C++DV AYNSLLEALC+ G+  EAYKMF+EMGS GV+ DA +YSIFIR+ 
Sbjct: 241 QVFDEMLQRKCVVDVFAYNSLLEALCRGGRVGEAYKMFREMGSKGVEADACSYSIFIRAY 300

Query: 335 CQENDLHTVYRVLERMKRHNLFPNVFTYNCVIKKLCKDKKVEEAYQLLDEMIERGVTPDT 394
           C+ ND+H+ +RVL+  KR+ L PNVFTYNC+IK LCK++KVEEAY++LDE+I+RG +PD 
Sbjct: 301 CESNDIHSAFRVLDETKRYGLLPNVFTYNCIIKTLCKNEKVEEAYEILDEIIDRGGSPDA 360

Query: 395 WSYNAIQAYHCEHSEVNSALNLIKRMDRDNCVPDRHTYNMVLKLLVRVGRFDRANEVWES 454
           WSYNAI AYHCEH EVN A  LI RM +DNC+PDRH+YNM+LKLL+R+GRFDRA EVWES
Sbjct: 361 WSYNAILAYHCEHCEVNRATKLISRMVKDNCLPDRHSYNMLLKLLIRIGRFDRATEVWES 420

Query: 455 MGEREFYPSVSTYAVMIHGFCKKKWKLEEACKYFEMMIDEGIPPYISTVELLRNRLLGIG 514
           M  R FYPSVSTY+VMIHGFCKKK KLEEACKYFEMMIDEGIPPY STVE+LRNRL G+G
Sbjct: 421 MEGRGFYPSVSTYSVMIHGFCKKKGKLEEACKYFEMMIDEGIPPYSSTVEMLRNRLTGLG 480

Query: 515 FKDHIEILGDKMRRSTSCSIQELANVMSGGKCHEVHRKSKNEETDFESD 564
             D+IEIL  KM RSTSCSIQE AN M GGK   +H +S++EET+ E+D
Sbjct: 481 LLDYIEILAGKMERSTSCSIQEFANAMRGGK---IHVRSRSEETEVETD 521

[Close]
BLAST of Lsi07G004730 vs. TAIR10
Match: AT1G52640.1 (AT1G52640.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 646.4 bits (1666), Expect = 1.7e-185
Identity = 315/526 (59.89%), Postives = 400/526 (76.05%), Query Frame = 1 

Query: 35  MAIRAFSPKFQISISLFCSLLKTNPFPHQRPFTSLATAAQAGSDSLLPFLVSEISRILSD 94
           MAIR  S       SL  +L +T      R F++L        D   P LV+EISR+LSD
Sbjct: 1   MAIRTVS-------SLVRALYQTPKSQSFRIFSTLL------HDPPSPDLVNEISRVLSD 60

Query: 95  HRSPHHDLDLGLSSFSSNVSTDLVEQVLKRCKNIGFSAHRFFLWAKRIPGFEPSADSYRI 154
           HR+P  DL+  L ++S  VS++LVEQVLKRCKN+GF AHRFFLWA+RIP F  S +SY I
Sbjct: 61  HRNPKDDLEHTLVAYSPRVSSNLVEQVLKRCKNLGFPAHRFFLWARRIPDFAHSLESYHI 120

Query: 155 LVDILGSSGQFAILWDFLIEIRETRCSVITHELFWLVFRAYSRTDLPQDAIRAFNRMGEF 214
           LV+ILGSS QFA+LWDFLIE RE     I+ ++FW+VFRAYSR +LP +A RAFNRM EF
Sbjct: 121 LVEILGSSKQFALLWDFLIEAREYNYFEISSKVFWIVFRAYSRANLPSEACRAFNRMVEF 180

Query: 215 GMRPGVDDLDQLLYILCKRKHVAHAQQFFDKVKS-GFNPSVKTYSILTRGWGDVGDSNNA 274
           G++P VDDLDQLL+ LC +KHV HAQ+FF K K  G  PS KTYSIL RGW  + D++ A
Sbjct: 181 GIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGWARIRDASGA 240

Query: 275 QKVFDEMQERGCLIDVLAYNSLLEALCKAGKRDEAYKMFQEMGSNGVDPDAGTYSIFIRS 334
           +KVFDEM ER C++D+LAYN+LL+ALCK+G  D  YKMFQEMG+ G+ PDA +++IFI +
Sbjct: 241 RKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHA 300

Query: 335 SCQENDLHTVYRVLERMKRHNLFPNVFTYNCVIKKLCKDKKVEEAYQLLDEMIERGVTPD 394
            C   D+H+ Y+VL+RMKR++L PNV+T+N +IK LCK++KV++AY LLDEMI++G  PD
Sbjct: 301 YCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPD 360

Query: 395 TWSYNAIQAYHCEHSEVNSALNLIKRMDRDNCVPDRHTYNMVLKLLVRVGRFDRANEVWE 454
           TW+YN+I AYHC+H EVN A  L+ RMDR  C+PDRHTYNMVLKLL+R+GRFDRA E+WE
Sbjct: 361 TWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWE 420

Query: 455 SMGEREFYPSVSTYAVMIHGFCKKKWKLEEACKYFEMMIDEGIPPYISTVELLRNRLLGI 514
            M ER+FYP+V+TY VMIHG  +KK KLEEAC+YFEMMIDEGIPPY +TVE+LRNRL+G 
Sbjct: 421 GMSERKFYPTVATYTVMIHGLVRKKGKLEEACRYFEMMIDEGIPPYSTTVEMLRNRLVGW 480

Query: 515 GFKDHIEILGDKMRRSTSCSIQELANVMSGGKCHEVHRKSKNEETD 560
           G  D +++L  KM RS+SCS+Q++A V   GK   + R+S+N E D
Sbjct: 481 GQMDVVDVLAGKMERSSSCSVQDMA-VEMRGKRRRLGRRSENSEDD 512

[Close]
BLAST of Lsi07G004730 vs. TAIR10
Match: AT1G77360.1 (AT1G77360.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 265.0 bits (676), Expect = 1.1e-70
Identity = 143/443 (32.28%), Postives = 243/443 (54.85%), Query Frame = 1 

Query: 84  LVSEISRILSDHRSPHHDLDLGLSSFSSNVSTDLVEQVLKRCKNIGFSAHRFFLWAKRIP 143
           +   IS++L    SP   LD  L      VS ++VE VL R +N G   +RFF W+++  
Sbjct: 71  VAKNISKVLMS--SPQLVLDSALDQSGLRVSQEVVEDVLNRFRNAGLLTYRFFQWSEKQR 130

Query: 144 GFEPSADSYRILVDILGSSGQFAILWDFLIEIRETRCSVITHELFWLVFRAYSRTDLPQD 203
            +E S  +Y ++++      Q+ ++WD +  +R+ +  ++  E F +V R Y+R     +
Sbjct: 131 HYEHSVRAYHMMIESTAKIRQYKLMWDLINAMRKKK--MLNVETFCIVMRKYARAQKVDE 190

Query: 204 AIRAFNRMGEFGMRPGVDDLDQLLYILCKRKHVAHAQQFFDKVKSGFNPSVKTYSILTRG 263
           AI AFN M ++ + P +   + LL  LCK K+V  AQ+ F+ ++  F P  KTYSIL  G
Sbjct: 191 AIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDRFTPDSKTYSILLEG 250

Query: 264 WGDVGDSNNAQKVFDEMQERGCLIDVLAYNSLLEALCKAGKRDEAYKMFQEMGSNGVDPD 323
           WG   +   A++VF EM + GC  D++ Y+ +++ LCKAG+ DEA  + + M  +   P 
Sbjct: 251 WGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPT 310

Query: 324 AGTYSIFIRSSCQENDLHTVYRVLERMKRHNLFPNVFTYNCVIKKLCKDKKVEEAYQLLD 383
              YS+ + +   EN L         M+R  +  +V  +N +I   CK  +++  Y++L 
Sbjct: 311 TFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLK 370

Query: 384 EMIERGVTPDTWSYNAIQAYHCEHSEVNSALNLIKRMDRDNCVPDRHTYNMVLKLLVRVG 443
           EM  +GVTP++ S N I  +  E  E + A ++ ++M +  C PD  TY MV+K+     
Sbjct: 371 EMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIK-VCEPDADTYTMVIKMFCEKK 430

Query: 444 RFDRANEVWESMGEREFYPSVSTYAVMIHGFCKKKWKLEEACKYFEMMIDEGIPPYISTV 503
             + A++VW+ M ++  +PS+ T++V+I+G C+++   ++AC   E MI+ GI P   T 
Sbjct: 431 EMETADKVWKYMRKKGVFPSMHTFSVLINGLCEER-TTQKACVLLEEMIEMGIRPSGVTF 490

Query: 504 ELLRNRLLGIGFKDHIEILGDKM 527
             LR  L+    +D ++ L +KM
Sbjct: 491 GRLRQLLIKEEREDVLKFLNEKM 507

[Close]
BLAST of Lsi07G004730 vs. TAIR10
Match: AT3G49730.1 (AT3G49730.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 248.8 bits (634), Expect = 7.8e-66
Identity = 132/430 (30.70%), Postives = 226/430 (52.56%), Query Frame = 1 

Query: 85  VSEISRILSDHRSPHHDLDLGLSSFSSNVSTDLVEQVLKRCKNIGFSAHRFFLWAKRIPG 144
           V +I RIL +H S    L+L L+    ++   L+ +VL RC + G   +RFFLWA + PG
Sbjct: 67  VEKIYRILRNHHSRVPKLELALNESGIDLRPGLIIRVLSRCGDAGNLGYRFFLWATKQPG 126

Query: 145 FEPSADSYRILVDILGSSGQFAILWDFLIEIRETRCSVITHELFWLVFRAYSRTDLPQDA 204
           +  S +  + +V IL    QF  +W  + E+R+T   +I  ELF ++ R ++  ++ + A
Sbjct: 127 YFHSYEVCKSMVMILSKMRQFGAVWGLIEEMRKTNPELIEPELFVVLMRRFASANMVKKA 186

Query: 205 IRAFNRMGEFGMRPGVDDLDQLLYILCKRKHVAHAQQFFDKVKSGFNPSVKTYSILTRGW 264
           +   + M ++G+ P       LL  LCK   V  A + F+ ++  F P+++ ++ L  GW
Sbjct: 187 VEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMREKFPPNLRYFTSLLYGW 246

Query: 265 GDVGDSNNAQKVFDEMQERGCLIDVLAYNSLLEALCKAGKRDEAYKMFQEMGSNGVDPDA 324
              G    A++V  +M+E G   D++ + +LL     AGK  +AY +  +M   G +P+ 
Sbjct: 247 CREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNV 306

Query: 325 GTYSIFIRSSCQ-ENDLHTVYRVLERMKRHNLFPNVFTYNCVIKKLCKDKKVEEAYQLLD 384
             Y++ I++ C+ E  +    RV   M+R+    ++ TY  +I   CK   +++ Y +LD
Sbjct: 307 NCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLD 366

Query: 385 EMIERGVTPDTWSYNAIQAYHCEHSEVNSALNLIKRMDRDNCVPDRHTYNMVLKLLVRVG 444
           +M ++GV P   +Y  I   H +  +    L LI++M R  C PD   YN+V++L  ++G
Sbjct: 367 DMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLG 426

Query: 445 RFDRANEVWESMGEREFYPSVSTYAVMIHGFCKKKWKLEEACKYFEMMIDEGI--PPYIS 504
               A  +W  M      P V T+ +MI+GF  + + L EAC +F+ M+  GI   P   
Sbjct: 427 EVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGF-LIEACNHFKEMVSRGIFSAPQYG 486

Query: 505 TVELLRNRLL 512
           T++ L N L+
Sbjct: 487 TLKSLLNNLV 495

[Close]
BLAST of Lsi07G004730 vs. TAIR10
Match: AT1G71060.1 (AT1G71060.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 233.4 bits (594), Expect = 3.4e-61
Identity = 133/424 (31.37%), Postives = 217/424 (51.18%), Query Frame = 1 

Query: 106 LSSFSSNVSTDLVEQVLKRCKNIGFSAHRFFLWAKRIPGFEPSADSYRILVDILGSSGQF 165
           L+  S  +S  L+E+VLK+  N G  A   F WA+   GF+ +  +Y  L++ LG   QF
Sbjct: 85  LNEASVKLSPALIEEVLKKLSNAGVLALSVFKWAENQKGFKHTTSNYNALIESLGKIKQF 144

Query: 166 AILWDFLIEIRETRCSVITHELFWLVFRAYSRTDLPQDAIRAFNRMGEFGMRPGVDDLDQ 225
            ++W  + +++  +  +++ E F L+ R Y+R    ++AI AF++M EFG +    D ++
Sbjct: 145 KLIWSLVDDMKAKK--LLSKETFALISRRYARARKVKEAIGAFHKMEEFGFKMESSDFNR 204

Query: 226 LLYILCKRKHVAHAQQFFDKVKSG-FNPSVKTYSILTRGWGDVGDSNNAQKVFDEMQERG 285
           +L  L K ++V  AQ+ FDK+K   F P +K+Y+IL  GWG   +     +V  EM++ G
Sbjct: 205 MLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEG 264

Query: 286 CLIDVLAYNSLLEALCKAGKRDEAYKMFQEMGSNGVDPDAGTYSIFIRSSCQENDLHTVY 345
              DV+AY  ++ A CKA K +EA + F EM      P    +   I     E  L+   
Sbjct: 265 FEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDAL 324

Query: 346 RVLERMKRHNLFPNVFTYNCVIKKLCKDKKVEEAYQLLDEMIERGVTPDTWSYNAIQAYH 405
              ER K         TYN ++   C  +++E+AY+ +DEM  +GV P+  +Y+ I  + 
Sbjct: 325 EFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHL 384

Query: 406 CEHSEVNSALNLIKRMDRDNCVPDRHTYNMVLKLLVRVGRFDRANEVWESMGEREFYPSV 465
                   A  + + M   +C P   TY +++++     R D A ++W+ M  +   P +
Sbjct: 385 IRMQRSKEAYEVYQTM---SCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGM 444

Query: 466 STYAVMIHGFCKKKWKLEEACKYFEMMIDEGIPPYISTVELLRNRLLGIGFKDHIEILGD 525
             ++ +I   C +  KL+EAC+YF  M+D GI P       L+  LL  G KD +  L  
Sbjct: 445 HMFSSLITALCHEN-KLDEACEYFNEMLDVGIRPPGHMFSRLKQTLLDEGRKDKVTDLVV 502

Query: 526 KMRR 529
           KM R
Sbjct: 505 KMDR 502

[Close]
BLAST of Lsi07G004730 vs. TAIR10
Match: AT5G65820.1 (AT5G65820.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 231.1 bits (588), Expect = 1.7e-60
Identity = 127/429 (29.60%), Postives = 219/429 (51.05%), Query Frame = 1 

Query: 85  VSEISRILSDHRSPHHDLDLGLSSFSSNVSTDLVEQVLKRCKNIGFSAHRFFLWAKRIPG 144
           V +  RIL    S    L+L L+     +   L+E+VL RC + G   +RFF+WA + P 
Sbjct: 83  VEKSYRILRKFHSRVPKLELALNESGVELRPGLIERVLNRCGDAGNLGYRFFVWAAKQPR 142

Query: 145 FEPSADSYRILVDILGSSGQFAILWDFLIEIRETRCSVITHELFWLVFRAYSRTDLPQDA 204
           +  S + Y+ +V IL    QF  +W  + E+R+    +I  ELF ++ + ++  D+ + A
Sbjct: 143 YCHSIEVYKSMVKILSKMRQFGAVWGLIEEMRKENPQLIEPELFVVLVQRFASADMVKKA 202

Query: 205 IRAFNRMGEFGMRPGVDDLDQLLYILCKRKHVAHAQQFFDKVKSGFNPSVKTYSILTRGW 264
           I   + M +FG  P       LL  LCK   V  A + F+ ++  F  +++ ++ L  GW
Sbjct: 203 IEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMRFPVNLRYFTSLLYGW 262

Query: 265 GDVGDSNNAQKVFDEMQERGCLIDVLAYNSLLEALCKAGKRDEAYKMFQEMGSNGVDPDA 324
             VG    A+ V  +M E G   D++ Y +LL     AGK  +AY + ++M   G +P+A
Sbjct: 263 CRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNA 322

Query: 325 GTYSIFIRSSCQENDLHTVYRVLERMKRHNLFPNVFTYNCVIKKLCKDKKVEEAYQLLDE 384
             Y++ I++ C+ + +    +V   M+R+    +V TY  ++   CK  K+++ Y +LD+
Sbjct: 323 NCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDD 382

Query: 385 MIERGVTPDTWSYNAIQAYHCEHSEVNSALNLIKRMDRDNCVPDRHTYNMVLKLLVRVGR 444
           MI++G+ P   +Y  I   H +       L L+++M +    PD   YN+V++L  ++G 
Sbjct: 383 MIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGE 442

Query: 445 FDRANEVWESMGEREFYPSVSTYAVMIHGFCKKKWKLEEACKYFEMMIDEGI--PPYIST 504
              A  +W  M E    P V T+ +MI+G   +   L EA  +F+ M+  G+       T
Sbjct: 443 VKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLL-EASDHFKEMVTRGLFSVSQYGT 502

Query: 505 VELLRNRLL 512
           ++LL N +L
Sbjct: 503 LKLLLNTVL 510

[Close]
BLAST of Lsi07G004730 vs. NCBI nr
Match: gi|659108995|ref|XP_008454493.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g52640, mitochondrial [Cucumis melo])

HSP 1 Score: 969.9 bits (2506), Expect = 1.9e-279
Identity = 471/529 (89.04%), Postives = 493/529 (93.19%), Query Frame = 1 

Query: 35  MAIRAFSPKFQISISLFCSLLKTNPFPHQRPFTSLATAAQAGSDSLLPFLVSEISRILSD 94
           MA+RAFS KF ISISLF SLL+TN F HQR FTSL+TAA AGSD  LPFLVSEISRILSD
Sbjct: 1   MAVRAFSSKFHISISLFSSLLRTNRFAHQRSFTSLSTAAPAGSDPSLPFLVSEISRILSD 60

Query: 95  HRSPHHDLDLGLSSFSSNVSTDLVEQVLKRCKNIGFSAHRFFLWAKRIPGFEPSADSYRI 154
            RSPHHDL+LGLSSFSSNVSTDLVEQVLKRCKNI FSAHRFFLWAKRIPGFEPS DSY I
Sbjct: 61  RRSPHHDLELGLSSFSSNVSTDLVEQVLKRCKNIAFSAHRFFLWAKRIPGFEPSDDSYHI 120

Query: 155 LVDILGSSGQFAILWDFLIEIRETRCSVITHELFWLVFRAYSRTDLPQDAIRAFNRMGEF 214
           +VDILGSSGQFAILWDFLIEIRE+R S+ITHELFW VF AYSR DLPQDAIRAFNRMGEF
Sbjct: 121 VVDILGSSGQFAILWDFLIEIRESRSSMITHELFWRVFTAYSRADLPQDAIRAFNRMGEF 180

Query: 215 GMRPGVDDLDQLLYILCKRKHVAHAQQFFDKVKSGFNPSVKTYSILTRGWGDVGDSNNAQ 274
           GMR GVDDLD+LL+ILCKRKHVAHAQQFFDKVKSGFNPSVKTYSILTRGWG VGDSNNAQ
Sbjct: 181 GMRAGVDDLDKLLHILCKRKHVAHAQQFFDKVKSGFNPSVKTYSILTRGWGVVGDSNNAQ 240

Query: 275 KVFDEMQERGCLIDVLAYNSLLEALCKAGKRDEAYKMFQEMGSNGVDPDAGTYSIFIRSS 334
           KVFDEM+ERGCLIDVLAYNSLLEALCK GKRDEAYKMFQEMGSNGV PDA TYSIFIRSS
Sbjct: 241 KVFDEMRERGCLIDVLAYNSLLEALCKGGKRDEAYKMFQEMGSNGVVPDADTYSIFIRSS 300

Query: 335 CQENDLHTVYRVLERMKRHNLFPNVFTYNCVIKKLCKDKKVEEAYQLLDEMIERGVTPDT 394
           CQENDLHTVYRVLER KR NL PNVFTYNC+IKKLCKD+KVEEAYQLLDEMIERGVTPDT
Sbjct: 301 CQENDLHTVYRVLERTKRQNLLPNVFTYNCIIKKLCKDQKVEEAYQLLDEMIERGVTPDT 360

Query: 395 WSYNAIQAYHCEHSEVNSALNLIKRMDRDNCVPDRHTYNMVLKLLVRVGRFDRANEVWES 454
           WSYNAIQAYHC+HSEVNSALNL+KRMDRD CVPD+HTYNMVLKLLVRVGRFDRANEVWES
Sbjct: 361 WSYNAIQAYHCDHSEVNSALNLVKRMDRDKCVPDKHTYNMVLKLLVRVGRFDRANEVWES 420

Query: 455 MGEREFYPSVSTYAVMIHGFCKKKWKLEEACKYFEMMIDEGIPPYISTVELLRNRLLGIG 514
           MG+R FYPSVSTYAVMIHGFCKKKWKLEEACKYFEMMIDEGIPPYI+TVELLR+RLLGIG
Sbjct: 421 MGKRGFYPSVSTYAVMIHGFCKKKWKLEEACKYFEMMIDEGIPPYIATVELLRDRLLGIG 480

Query: 515 FKDHIEILGDKMRRSTSCSIQELANVMSGGKCHEVHRKSKNEETDFESD 564
           FKD + ILGDKM+RSTSCSIQELANVMSGGKC E     KNEET+ ES+
Sbjct: 481 FKDQVAILGDKMKRSTSCSIQELANVMSGGKCREAQSTLKNEETELESN 529

[Close]
BLAST of Lsi07G004730 vs. NCBI nr
Match: gi|449469288|ref|XP_004152353.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g52640, mitochondrial [Cucumis sativus])

HSP 1 Score: 952.6 bits (2461), Expect = 3.1e-274
Identity = 465/529 (87.90%), Postives = 487/529 (92.06%), Query Frame = 1 

Query: 35  MAIRAFSPKFQISISLFCSLLKTNPFPHQRPFTSLATAAQAGSDSLLPFLVSEISRILSD 94
           MAIRA S KF+ISISLF SLL+TN F HQR FTS AT A+AGSD  LPFLVSEISRILSD
Sbjct: 1   MAIRACSSKFRISISLFSSLLRTNRFAHQRSFTSFATEARAGSDPTLPFLVSEISRILSD 60

Query: 95  HRSPHHDLDLGLSSFSSNVSTDLVEQVLKRCKNIGFSAHRFFLWAKRIPGFEPSADSYRI 154
            R+PHHDL++GLSSFSSNVSTDLVEQVLKRCKNI FSAHRFFLWAKRIPGFEPS DSY I
Sbjct: 61  RRNPHHDLEVGLSSFSSNVSTDLVEQVLKRCKNIAFSAHRFFLWAKRIPGFEPSDDSYHI 120

Query: 155 LVDILGSSGQFAILWDFLIEIRETRCSVITHELFWLVFRAYSRTDLPQDAIRAFNRMGEF 214
           +VDILGSSGQFAILWDFLIEIRETR SVITHELFW VF AYSR DLPQDAIRAFNRMGEF
Sbjct: 121 VVDILGSSGQFAILWDFLIEIRETRSSVITHELFWHVFTAYSRADLPQDAIRAFNRMGEF 180

Query: 215 GMRPGVDDLDQLLYILCKRKHVAHAQQFFDKVKSGFNPSVKTYSILTRGWGDVGDSNNAQ 274
           G+R GVDDLD+LLY LCKRKHVAHAQQFFDKVKS FNPSVKTYSILTRGWG VGDSNNAQ
Sbjct: 181 GIRAGVDDLDKLLYTLCKRKHVAHAQQFFDKVKSVFNPSVKTYSILTRGWGVVGDSNNAQ 240

Query: 275 KVFDEMQERGCLIDVLAYNSLLEALCKAGKRDEAYKMFQEMGSNGVDPDAGTYSIFIRSS 334
           KVFDEM+ERGCLIDVLAYNSLLEALCK GKRDEAYKMF EM SNGVDPDA TYSIFIRSS
Sbjct: 241 KVFDEMRERGCLIDVLAYNSLLEALCKGGKRDEAYKMFLEMDSNGVDPDADTYSIFIRSS 300

Query: 335 CQENDLHTVYRVLERMKRHNLFPNVFTYNCVIKKLCKDKKVEEAYQLLDEMIERGVTPDT 394
           CQENDLHTVYRVLER KR NL PNVFTYNCVIKKLCKD+ VEEAYQ+LDEMIERGVTPDT
Sbjct: 301 CQENDLHTVYRVLERTKRKNLLPNVFTYNCVIKKLCKDQNVEEAYQILDEMIERGVTPDT 360

Query: 395 WSYNAIQAYHCEHSEVNSALNLIKRMDRDNCVPDRHTYNMVLKLLVRVGRFDRANEVWES 454
           WSYNAIQAYHC+HSEVNSALNL+KRMDRD CVPD+HTYNMVLKLLVRVGRFDRANEVWES
Sbjct: 361 WSYNAIQAYHCDHSEVNSALNLVKRMDRDKCVPDKHTYNMVLKLLVRVGRFDRANEVWES 420

Query: 455 MGEREFYPSVSTYAVMIHGFCKKKWKLEEACKYFEMMIDEGIPPYISTVELLRNRLLGIG 514
           MG+R FYPSVSTYAVMIHGFCKKKWKLEEACKYFEMMIDEGIPPYI+TVELLR+RLLGIG
Sbjct: 421 MGKRGFYPSVSTYAVMIHGFCKKKWKLEEACKYFEMMIDEGIPPYIATVELLRDRLLGIG 480

Query: 515 FKDHIEILGDKMRRSTSCSIQELANVMSGGKCHEVHRKSKNEETDFESD 564
           FKD + ILGDKM+RSTSCSIQELAN+MSGGK  E     KNEET+ ESD
Sbjct: 481 FKDQVAILGDKMKRSTSCSIQELANLMSGGKRREAQSMLKNEETEHESD 529

[Close]
BLAST of Lsi07G004730 vs. NCBI nr
Match: gi|694368730|ref|XP_009362528.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g52640, mitochondrial-like [Pyrus x bretschneideri])

HSP 1 Score: 771.9 bits (1992), Expect = 7.5e-220
Identity = 369/530 (69.62%), Postives = 439/530 (82.83%), Query Frame = 1 

Query: 35  MAIRAFSPKFQISISLFCSLLK-TNPFPHQRPFTSLATAAQAGSDSLLPFLVSEISRILS 94
           M++R+   K +   S+F SLL  + P  H+ PF+SL         S  P LVSE SRILS
Sbjct: 1   MSLRSLPSKPKTLHSIFHSLLSPSKPNTHRHPFSSLTHHNPPSPPS--PHLVSEFSRILS 60

Query: 95  DHRSPHHDLDLGLSSFSSNVSTDLVEQVLKRCKNIGFSAHRFFLWAKRIPGFEPSADSYR 154
           DHR+PHHDL+L L++ S+ +STDLVEQVLKRCKN+G SAHRFFLWAK IPGF  SA+SY 
Sbjct: 61  DHRNPHHDLELSLNALSTQISTDLVEQVLKRCKNLGLSAHRFFLWAKTIPGFRHSAESYH 120

Query: 155 ILVDILGSSGQFAILWDFLIEIRETRCSVITHELFWLVFRAYSRTDLPQDAIRAFNRMGE 214
           IL+DILGSS Q+A+LWDFLIE+RE++C  I  E+FWL+FR YSR +LP+DAIRA NRM E
Sbjct: 121 ILIDILGSSKQYAVLWDFLIEVRESKCCEIGPEIFWLIFRVYSRANLPRDAIRALNRMVE 180

Query: 215 FGMRPGVDDLDQLLYILCKRKHVAHAQQFFDKVKSGFNPSVKTYSILTRGWGDVGDSNNA 274
           FG++P V DLDQLLY LCKRKHV +A +FFDKVKSGF  + KTYSIL RGWGDVGDS+ A
Sbjct: 181 FGIKPSVHDLDQLLYTLCKRKHVKYAHEFFDKVKSGFELNAKTYSILMRGWGDVGDSDEA 240

Query: 275 QKVFDEMQERGCLIDVLAYNSLLEALCKAGKRDEAYKMFQEMGSNGVDPDAGTYSIFIRS 334
           +K+FDEM ERGCL+DV AYNS LEALCK GK DEAYK+F+EMGSNGV+PDA TYSIFIR+
Sbjct: 241 RKLFDEMTERGCLVDVPAYNSYLEALCKGGKVDEAYKIFREMGSNGVEPDACTYSIFIRA 300

Query: 335 SCQENDLHTVYRVLERMKRHNLFPNVFTYNCVIKKLCKDKKVEEAYQLLDEMIERGVTPD 394
            C+ +D+H+V+RVL+RM+R+NL PNV+TYNCVIKKLCK++KVEEAYQLLDEM ERGV PD
Sbjct: 301 YCEVDDIHSVFRVLDRMRRYNLLPNVYTYNCVIKKLCKNEKVEEAYQLLDEMTERGVMPD 360

Query: 395 TWSYNAIQAYHCEHSEVNSALNLIKRMDRDNCVPDRHTYNMVLKLLVRVGRFDRANEVWE 454
           TWSYNAIQAYHC+H EVN +L L+ RM++DNC+PDRHTYNMVLKLL+R+GRFDRA EVWE
Sbjct: 361 TWSYNAIQAYHCDHCEVNGSLRLLSRMEKDNCMPDRHTYNMVLKLLIRIGRFDRATEVWE 420

Query: 455 SMGEREFYPSVSTYAVMIHGFCKKKWKLEEACKYFEMMIDEGIPPYISTVELLRNRLLGI 514
           SMG+  FYPSVSTY+VMIHG CKKK KLEEACKYFE+MIDEGIPPY STVE+L NR+ G+
Sbjct: 421 SMGKIGFYPSVSTYSVMIHGLCKKKRKLEEACKYFEIMIDEGIPPYSSTVEMLSNRIRGL 480

Query: 515 GFKDHIEILGDKMRRSTSCSIQELANVMSGGKCHEVHRKSKNEETDFESD 564
           G  DHIEIL  KM +STSCSIQELAN+M G K +     S++ E+DFESD
Sbjct: 481 GLLDHIEILASKMEQSTSCSIQELANLMRGNKAYVA---SRSVESDFESD 525

[Close]
BLAST of Lsi07G004730 vs. NCBI nr
Match: gi|694444519|ref|XP_009348775.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g52640, mitochondrial-like [Pyrus x bretschneideri])

HSP 1 Score: 766.1 bits (1977), Expect = 4.1e-218
Identity = 368/530 (69.43%), Postives = 436/530 (82.26%), Query Frame = 1 

Query: 35  MAIRAFSPKFQISISLFCSLLK-TNPFPHQRPFTSLATAAQAGSDSLLPFLVSEISRILS 94
           M++R+   K +   S+F SLL  + P  H+ PF+SL         S  P LVSE SRILS
Sbjct: 1   MSLRSLPSKPKTLHSIFHSLLSPSKPNTHRHPFSSLTHHNPPSPPS--PHLVSEFSRILS 60

Query: 95  DHRSPHHDLDLGLSSFSSNVSTDLVEQVLKRCKNIGFSAHRFFLWAKRIPGFEPSADSYR 154
           DHR+PHHDL+L L++ S+ +STDLVEQVLKRCKN+G SAHRFFLWAK IPGF  SA+SY 
Sbjct: 61  DHRNPHHDLELSLNALSTQISTDLVEQVLKRCKNLGLSAHRFFLWAKAIPGFRHSAESYH 120

Query: 155 ILVDILGSSGQFAILWDFLIEIRETRCSVITHELFWLVFRAYSRTDLPQDAIRAFNRMGE 214
           IL+DILGSS Q+A+LWDFLIE+RE++C  I  E+FWL+FR YSR +LP+DAIRA NRM E
Sbjct: 121 ILIDILGSSKQYAVLWDFLIEVRESKCCEIGPEIFWLIFRVYSRANLPRDAIRALNRMVE 180

Query: 215 FGMRPGVDDLDQLLYILCKRKHVAHAQQFFDKVKSGFNPSVKTYSILTRGWGDVGDSNNA 274
           FG++P V DLDQLLY LCKRKHV +A +FFDKVKSGF  + KTYSIL RGWGDVGDS+ A
Sbjct: 181 FGIKPSVHDLDQLLYTLCKRKHVKYAHEFFDKVKSGFELNAKTYSILMRGWGDVGDSDEA 240

Query: 275 QKVFDEMQERGCLIDVLAYNSLLEALCKAGKRDEAYKMFQEMGSNGVDPDAGTYSIFIRS 334
           +K+FDEM ERGCL+DV AYNS LEALCK GK DEAYK+F+EMGSNGV PDA TYSIFIR+
Sbjct: 241 RKLFDEMTERGCLVDVPAYNSYLEALCKGGKVDEAYKIFREMGSNGVVPDACTYSIFIRA 300

Query: 335 SCQENDLHTVYRVLERMKRHNLFPNVFTYNCVIKKLCKDKKVEEAYQLLDEMIERGVTPD 394
            C+ +D+H+V+RVL+RM+R+NL PNV+TYNCVIKKLCK++KVEEAYQLLDEMIER V  D
Sbjct: 301 YCEVDDIHSVFRVLDRMRRYNLLPNVYTYNCVIKKLCKNEKVEEAYQLLDEMIERSVMAD 360

Query: 395 TWSYNAIQAYHCEHSEVNSALNLIKRMDRDNCVPDRHTYNMVLKLLVRVGRFDRANEVWE 454
           TWSYNAIQAYHC+H EVN +L L+ RM+ DNC+PDRHTYNMVLKLL+R+GRFDRA EVWE
Sbjct: 361 TWSYNAIQAYHCDHCEVNGSLRLLSRMETDNCMPDRHTYNMVLKLLIRIGRFDRATEVWE 420

Query: 455 SMGEREFYPSVSTYAVMIHGFCKKKWKLEEACKYFEMMIDEGIPPYISTVELLRNRLLGI 514
           SMG+R FYPSVSTY+VMIHG CKKK KLEEACKYFE+MIDEGIPPY STVE+L NR+ G+
Sbjct: 421 SMGKRGFYPSVSTYSVMIHGLCKKKRKLEEACKYFEIMIDEGIPPYSSTVEMLSNRIRGL 480

Query: 515 GFKDHIEILGDKMRRSTSCSIQELANVMSGGKCHEVHRKSKNEETDFESD 564
           G  DHIEIL  KM +STSCSIQE AN+M G K +     S++ E+DFESD
Sbjct: 481 GLLDHIEILASKMEQSTSCSIQESANLMRGNKAYVA---SRSVESDFESD 525

[Close]
BLAST of Lsi07G004730 vs. NCBI nr
Match: gi|1009113014|ref|XP_015871257.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g52640, mitochondrial [Ziziphus jujuba])

HSP 1 Score: 756.1 bits (1951), Expect = 4.3e-215
Identity = 365/529 (69.00%), Postives = 429/529 (81.10%), Query Frame = 1 

Query: 35  MAIRAFSPKFQISISLFCSLLKTNPFPHQRPFTSLATAAQAGSDSLLPFLVSEISRILSD 94
           M  R  S K +   SLF SL+ +    +  PF S   A    SD  LP LV++ISR++SD
Sbjct: 1   MLNRYLSSKPKAVRSLFYSLIPSKSH-NLHPFCSFNAAR---SDPPLPDLVNDISRVISD 60

Query: 95  HRSPHHDLDLGLSSFSSNVSTDLVEQVLKRCKNIGFSAHRFFLWAKRIPGFEPSADSYRI 154
           HR+PHHDL+L L+SFS+ +ST+LVEQVLKRCKN+GFSAHRFFLWAK +P F  S +SY I
Sbjct: 61  HRNPHHDLELSLTSFSTQISTNLVEQVLKRCKNLGFSAHRFFLWAKTVPNFVHSVESYHI 120

Query: 155 LVDILGSSGQFAILWDFLIEIRETRCSVITHELFWLVFRAYSRTDLPQDAIRAFNRMGEF 214
           LVDILGSS QFAILWD L+++RE+RC  I+ E+FW++FRAYSR +LP+DAIRAFNRM EF
Sbjct: 121 LVDILGSSKQFAILWDLLLDMRESRCCEISPEIFWVIFRAYSRANLPRDAIRAFNRMVEF 180

Query: 215 GMRPGVDDLDQLLYILCKRKHVAHAQQFFDKVKSGFNPSVKTYSILTRGWGDVGDSNNAQ 274
           G++P + DLDQLLY LCKRKHV  AQQ FDKVKSGF+P+ KTYSIL RGWGDVGD+N A+
Sbjct: 181 GIKPTIHDLDQLLYALCKRKHVKDAQQIFDKVKSGFDPNAKTYSILIRGWGDVGDANEAR 240

Query: 275 KVFDEMQERGCLIDVLAYNSLLEALCKAGKRDEAYKMFQEMGSNGVDPDAGTYSIFIRSS 334
           KVFDEM ERGC +DVLAYNS LEALCK G  DEAYK+FQEM    VDPDA TYS+FIR+ 
Sbjct: 241 KVFDEMVERGCSLDVLAYNSYLEALCKGGNVDEAYKIFQEMVPKAVDPDAWTYSVFIRAY 300

Query: 335 CQENDLHTVYRVLERMKRHNLFPNVFTYNCVIKKLCKDKKVEEAYQLLDEMIERGVTPDT 394
           CQ ND+H+V+RVL RM+R+NL PNVFTYNC+IKKLCK  K+EEAYQLLDEMIE+GVTPDT
Sbjct: 301 CQANDIHSVFRVLNRMRRYNLLPNVFTYNCIIKKLCKIDKMEEAYQLLDEMIEKGVTPDT 360

Query: 395 WSYNAIQAYHCEHSEVNSALNLIKRMDRDNCVPDRHTYNMVLKLLVRVGRFDRANEVWES 454
           WSYNAI AYHC+H EVN AL L+ RM+ D C+PDRHTYNM+LK+L+RVGRFDR  EVW+ 
Sbjct: 361 WSYNAILAYHCDHCEVNMALRLLARMENDKCMPDRHTYNMLLKMLIRVGRFDRVAEVWDG 420

Query: 455 MGEREFYPSVSTYAVMIHGFCKKKWKLEEACKYFEMMIDEGIPPYISTVELLRNRLLGIG 514
           MG R FYPSVSTY VMIHG C KK KL+EACKYFEMMIDEGIPPY STVELLRN+LLG+G
Sbjct: 421 MGGRGFYPSVSTYTVMIHGHCHKKGKLQEACKYFEMMIDEGIPPYSSTVELLRNQLLGLG 480

Query: 515 FKDHIEILGDKMRRSTSCSIQELANVMSGGKCHEVHRKSKNEETDFESD 564
           F + IEI+  KM RSTSCSIQE AN+M G +   V++ S+ EETD ESD
Sbjct: 481 FLEQIEIIASKMDRSTSCSIQEFANMMRGNR---VYKPSRREETDLESD 522

The following BLAST results are available for this feature:
BLAST of Lsi07G004730 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PPR78_ARATH3.0e-18459.89Pentatricopeptide repeat-containing protein At1g52640, mitochondrial OS=Arabidop... [more]
PP129_ARATH1.9e-6932.28Pentatricopeptide repeat-containing protein At1g77360, mitochondrial OS=Arabidop... [more]
PP275_ARATH1.4e-6430.70Pentatricopeptide repeat-containing protein At3g49730 OS=Arabidopsis thaliana GN... [more]
PP112_ARATH6.0e-6031.37Pentatricopeptide repeat-containing protein At1g71060, mitochondrial OS=Arabidop... [more]
PP447_ARATH3.0e-5929.60Putative pentatricopeptide repeat-containing protein At5g65820 OS=Arabidopsis th... [more]
BLAST of Lsi07G004730 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KYE8_CUCSA2.2e-27487.90Uncharacterized protein OS=Cucumis sativus GN=Csa_4G004910 PE=4 SV=1[more]
M5WV46_PRUPE6.2e-21367.55Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa004160mg PE=4 SV=1[more]
B9SY25_RICCO1.2e-21168.24Pentatricopeptide repeat-containing protein, putative OS=Ricinus communis GN=RCO... [more]
B9H3Q3_POPTR3.8e-21067.67Pentatricopeptide repeat-containing family protein OS=Populus trichocarpa GN=POP... [more]
A0A067LL05_JATCU3.5e-20867.11Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01534 PE=4 SV=1[more]
BLAST of Lsi07G004730 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G52640.11.7e-18559.89 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT1G77360.11.1e-7032.28 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT3G49730.17.8e-6630.70 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT1G71060.13.4e-6131.37 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT5G65820.11.7e-6029.60 Pentatricopeptide repeat (PPR) superfamily protein[more]
BLAST of Lsi07G004730 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659108995|ref|XP_008454493.1|1.9e-27989.04PREDICTED: pentatricopeptide repeat-containing protein At1g52640, mitochondrial ... [more]
gi|449469288|ref|XP_004152353.1|3.1e-27487.90PREDICTED: pentatricopeptide repeat-containing protein At1g52640, mitochondrial ... [more]
gi|694368730|ref|XP_009362528.1|7.5e-22069.62PREDICTED: pentatricopeptide repeat-containing protein At1g52640, mitochondrial-... [more]
gi|694444519|ref|XP_009348775.1|4.1e-21869.43PREDICTED: pentatricopeptide repeat-containing protein At1g52640, mitochondrial-... [more]
gi|1009113014|ref|XP_015871257.1|4.3e-21569.00PREDICTED: pentatricopeptide repeat-containing protein At1g52640, mitochondrial ... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR002885Pentatricopeptide_repeat
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi07G004730.1Lsi07G004730.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 192..215
score: 0.61coord: 256..285
score: 0
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 288..336
score: 2.7E-15coord: 427..476
score: 4.5E-13coord: 357..399
score: 3.0
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 256..289
score: 7.7E-4coord: 291..324
score: 5.4E-9coord: 466..498
score: 8.9E-6coord: 430..463
score: 5.6E-7coord: 360..394
score: 8.8E-11coord: 326..359
score: 1.
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 184..218
score: 8.331coord: 148..182
score: 6.478coord: 428..462
score: 11.389coord: 463..498
score: 12.408coord: 323..357
score: 10.073coord: 358..392
score: 13.899coord: 393..427
score: 9.24coord: 253..287
score: 10.084coord: 288..322
score: 13
IPR011990Tetratricopeptide-like helical domainGENE3DG3DSA:1.25.40.10coord: 288..453
score: 5.
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 94..540
score: 9.1E-274coord: 35..62
score: 9.1E
NoneNo IPR availablePANTHERPTHR24015:SF706SUBFAMILY NOT NAMEDcoord: 94..540
score: 9.1E-274coord: 35..62
score: 9.1E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Lsi07G004730MELO3C012922Melon (DHL92) v3.5.1lsimeB436
Lsi07G004730MELO3C017893Melon (DHL92) v3.5.1lsimeB447
Lsi07G004730Bhi01G002769Wax gourdlsiwgoB546
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi07G004730Wild cucumber (PI 183967)cpilsiB136
Lsi07G004730Wild cucumber (PI 183967)cpilsiB137
Lsi07G004730Wild cucumber (PI 183967)cpilsiB311
Lsi07G004730Wild cucumber (PI 183967)cpilsiB546
Lsi07G004730Cucumber (Chinese Long) v2culsiB138
Lsi07G004730Cucumber (Chinese Long) v2culsiB137
Lsi07G004730Cucumber (Chinese Long) v2culsiB312
Lsi07G004730Cucumber (Chinese Long) v2culsiB532
Lsi07G004730Melon (DHL92) v3.5.1lsimeB430
Lsi07G004730Melon (DHL92) v3.5.1lsimeB435
Lsi07G004730Melon (DHL92) v3.5.1lsimeB442
Lsi07G004730Watermelon (Charleston Gray)lsiwcgB387
Lsi07G004730Watermelon (Charleston Gray)lsiwcgB392
Lsi07G004730Watermelon (Charleston Gray)lsiwcgB404
Lsi07G004730Watermelon (Charleston Gray)lsiwcgB406
Lsi07G004730Watermelon (Charleston Gray)lsiwcgB418
Lsi07G004730Watermelon (97103) v1lsiwmB426
Lsi07G004730Watermelon (97103) v1lsiwmB432
Lsi07G004730Watermelon (97103) v1lsiwmB438
Lsi07G004730Watermelon (97103) v1lsiwmB461
Lsi07G004730Cucumber (Gy14) v2cgyblsiB285
Lsi07G004730Cucumber (Gy14) v2cgyblsiB502
Lsi07G004730Melon (DHL92) v3.6.1lsimedB455
Lsi07G004730Melon (DHL92) v3.6.1lsimedB451
Lsi07G004730Melon (DHL92) v3.6.1lsimedB461
Lsi07G004730Melon (DHL92) v3.6.1lsimedB465
Lsi07G004730Silver-seed gourdcarlsiB109
Lsi07G004730Silver-seed gourdcarlsiB182
Lsi07G004730Silver-seed gourdcarlsiB520
Lsi07G004730Silver-seed gourdcarlsiB939
Lsi07G004730Cucumber (Chinese Long) v3cuclsiB150
Lsi07G004730Cucumber (Chinese Long) v3cuclsiB148
Lsi07G004730Cucumber (Chinese Long) v3cuclsiB331
Lsi07G004730Cucumber (Chinese Long) v3cuclsiB568
Lsi07G004730Watermelon (97103) v2lsiwmbB403
Lsi07G004730Watermelon (97103) v2lsiwmbB405
Lsi07G004730Watermelon (97103) v2lsiwmbB417
Lsi07G004730Watermelon (97103) v2lsiwmbB420
Lsi07G004730Wax gourdlsiwgoB568
Lsi07G004730Wax gourdlsiwgoB577
Lsi07G004730Bottle gourd (USVL1VR-Ls)lsilsiB117
Lsi07G004730Bottle gourd (USVL1VR-Ls)lsilsiB164
Lsi07G004730Bottle gourd (USVL1VR-Ls)lsilsiB167
Lsi07G004730Cucumber (Gy14) v1cgylsiB113
Lsi07G004730Cucumber (Gy14) v1cgylsiB136
Lsi07G004730Cucumber (Gy14) v1cgylsiB266
Lsi07G004730Cucurbita maxima (Rimu)cmalsiB081
Lsi07G004730Cucurbita maxima (Rimu)cmalsiB256
Lsi07G004730Cucurbita maxima (Rimu)cmalsiB450
Lsi07G004730Cucurbita maxima (Rimu)cmalsiB736
Lsi07G004730Cucurbita moschata (Rifu)cmolsiB068
Lsi07G004730Cucurbita moschata (Rifu)cmolsiB137
Lsi07G004730Cucurbita moschata (Rifu)cmolsiB174
Lsi07G004730Cucurbita moschata (Rifu)cmolsiB244
Lsi07G004730Cucurbita moschata (Rifu)cmolsiB349
Lsi07G004730Cucurbita moschata (Rifu)cmolsiB437
Lsi07G004730Cucurbita moschata (Rifu)cmolsiB727
Lsi07G004730Cucurbita pepo (Zucchini)cpelsiB127
Lsi07G004730Cucurbita pepo (Zucchini)cpelsiB472
Lsi07G004730Cucurbita pepo (Zucchini)cpelsiB516