Lsi07G004360 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi07G004360
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionDicer-like protein 4
Locationchr07 : 4647008 .. 4652080 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAGTAAGATGTGGAGAATGCTTTCCTTTATGGAGAGTTGAATGGAGACATTTTCATGAAACAACCTCATGATTTTGGTATGGTAATTGCCTAATATCTTGAACTTGGTGAGTTTAGATCTTCAAATGCGGATTCCAATCTATTTGTTAAAAAGACAAGTCCAAGATGTACAAAACTTCTACTTTATGTTGATGACATGATTATAACAGGTGATGACAAAGTTGAAATTAGTAGGAAATGCTTTGTCTATTCATTTTGAAATGAATAGTTTGGGTGAAACAAGATGTTTACTTCACTTGGATGTTGAAAGGTCAAATGGATTCTTTGTCTCACATGAAGGGTATGCTGCAAGATTATTGAATATTTTTGACATGAAGGAGTCAAAACCAATGACTACTTCTATGGTGCAATCCTTGAAGTTGGTTAAGAAAGAAGGAAAACGATTGACAGATGCAACACTTTTTCGACAACTTATTGGTAGTTTAATTTATTTAAATATCACAAGGCCTGATGTTTCTTACTTTGTTGGTGTTATTGCTCAGTTTATGGATAAACCATGTGAAGCTCATTTAATTACAACAAAGAGGATTCTACGATATGTGAAGAACACTCTATGTCCTGACTTGTTGTATAAACAAACTACATTTTTTTAAGTGGTTTTGTCGATGCATGTTGGGTTAGGAACGTAAATGAAAGATTTTCCATAACAAGATATTGTTTCAATGTGTAGGTCCATAATAGGTTTCCATAAATAGACACAAACTACATTTCACTTTCTTTGAGAGAAAGTCTTGACTCAAGACATCTAATTGCTGAAGATACATTCCAAGAAGCAAGTTGCTGATATATTTACCAAGAGTCTTGGGTAAATTCAAGTTTGAAGAACTAGGAGTGCACTTAGTGTGATTGATCGTATGTTTGTTCTAAGGAGGAGTATTAAGAATTAGTGTAAACTCAGTTCGCAAGTAATCAAATTAGCTTTTACTTTTAATTTAGGTTAGAAGGGTAGTGACCTAATGACTTAGTGAGAGGAGAATTTCAAGGTTAGAGGTAGAAGTTAGTGTTTGAGTGGTTAGTTTTTATTTTTCCTATAAATACTTGTAATGTTTCCACTTCATTGTATATAGAATTCAATTGAAGCTCTTAGATCCTCCGTGCAATATTTTTCTCTTATTTTTATCTTTCATTCTCTTCGTCTTCGTTTGTTATTTTTAATTATGATAAGGGGCTATATTTAATATATCCACCATAATTTGGTAGTATAACAATGATTTTTTTAAACTACTAGAGATATTTCCATAAAACGACATATAATCAATAAATAGTAGATTTTTGAAAAAAATGATGTTACCAACATCTCTACACCAAAATATCGCGATATTTCGTCGTTCTTATACACGGAAGCTTAAAATTTAGGACCAGTTTGGTACCCAGTCTGAAAACAAAAATTTACAAGGAAAAACTAAATTCTAATTCAAAGAATTGTTCAAAATGTGTTTGATAATATATTTATAATTCATAAAATTAATTATAGTTACTCACTGAATATTAGATGGAATAAAAACTATTATTAATTAATTTATGAACTTGGTTTATGGTAAAAATTTTATATAGCTATTATTTTCTAATATCATATAATTTATACAATATTATATAATATATAATTATTTAATAAAAATAATTAAATTTATAACTTGAAATACTATATTTGTTAATATTTTTATTTATTTTAATATAATTGTGCATATTAAAATTTCAAACTTAAAATTTGAATTCACCAAACAAAATAGTTTTTAAAAACAGAATTGTGAATCTAAAAACATAAAAAAAAATATAAATTGTTTATTAAACATATTTTTAGAAAAACTAAATTTAAAAATTGGCATTTACAAACTTTGATAGGTTAGTTAAGATTAAAGTGATTATGGTAAATTAATAAATAAGTTGTTTTACTAAACAAAAGGGCGGTTAAGATTTCCCTTAAATTACTTTTGCAAACGCAATCTTTAGTATTCGTAGGAATGAAATCACTTTACTGTAAACCAGAGAAAGAGAAAGAAGAAAGAAAACAAGAATTTATTCCGAAGGGGACATTATCAGAGGCTCAATCTACACTAAATTTTCCATTTCTTGTATGAGAACAGTCCTTAATGCTCTAATCTTTCTTTCATTTCTAGGATTATTATGCTTCGGTTGCTGTGAATCTTCCATTTACTGATTTCGCTGTGAAAATTGATGTATGAGACAGTACACAGAGATCGTCGAAGCAGAGCGGAAGAATTTAGGAAAGCAGATGGAGAACACTCGTTCCTGTCCTCGAAGATTGAATGTCAATCTCAAAAATCTTCCTCCAATTAATAACCCGCGCATTGGAAATGAAAATCACCCCTCGATTCCGGTAAAATTTGGTTTCATTTCCTGCGATTGTATAAAGAAAATTCGAAAGGACTTTGATTTTGATCTGACTTGTTTCAGGCTAAATTTGAGAAATCAAGGTATATTAGGCGCGTTCCTCAGTTTATGCCGCCTAATTACCGGTCGGAAATAAGGCCGAACGAATATTCTGGCTTGCCGATCAAACCAGCGTGTTCTGATTCCGCTCGAGCTCTGAATACGAAGACGATTCCAGAGGCTCCGTCGGATTCCTTCGTTGAAAAGAAAGACAATTGCAAGGAAATAACTTCGAGGTGCTGTTGTTGCAGACATGGCTCGACCAAAGAAGGTACCGGTTTAAACCTAGTTCCTTAACTTCATTGATTGCTGTTTGAAATTCGAGATAGACGACTCCTGTTATGTTTCATCATTTTCATGGATTGTTCTTTTCTTCGTGATTTTGTGGTTTTCTTCTAACAATTGATTGTTCAACTCACATGCATTTCATCAGATTACTGTCTTCACCGCCCATTAAACCCCAATCCCTTTCCCACTTCGTCATTAATATTCGTCCATTAATTTCAAGGTGCAGTTGTAAAAAAGAAAAAAGAAAAAAAAAAAAAAGAGAAAGAAGTTGTCTATGGTAAGCATTTGGTCTCTAAACTTTCCAAAGCAGAACTCTGGATCAGGATCATTTTCCTGATTGTTTTTGAACAGTATCATTACTTTCTATTTTTCTTTTCTCGTTTTCTCTTTCGATTCTTCTCAGGATGACTTGTTTTCAATAATGAATGAATGTTGTGTGTGAATGGTGTATTCCAAGCCACATAAAAACAGTAACATTAGACTTTATAATTTATTCGATAATAGTCCTTAGTGGTAGAAAGTTGTGAGAATAGTTTTCTAAATTAAGCTGTAGTTGATAACCATTTTGCTTTTAGTTGTTTGTTTTTGAATTTATATTTATTTCCTCTCAATTTTCTAATTATAATATTCATCTTGGTTAAAGAAACACTTCAACAAAAACACAAAAAGAAAGTTTTTGGAAACTACTTTTTTTTTTTTTTTTAATTTTCAAAATTTAGCTTGGTTTCTTAAAATGTTAGCAAAAAGTTGATAACAAAAACTTATGGATGGAACGTGGAAGTAGTGTTTGTGAGCTTAATTTTCAAAATCTAAAAATTCAAAACCCAAAATCCCACCTCAAATATGTAAATAGGAGAATAAGTAATTTAATATCTTTGCCGTCTTTTAGAGTTGACTTTGGAGTTGAGTTCTCTATAGATTGGTGGGGTGGGTCATGAGCAAAATACAAGGAGTGAGTCTCATTCTCCATTTATCAATTCAAAGAAAAACTCACAAGAACAAAATAAGAGGAAGACTAGCAACTCAACTAGCAAAATGCACACAAGCTCTTTCACTTTGATGGCTTACTTGATCCTCGTTTAAGCTGGATGAGGAAGACTACTCACTTTATTGACGATTTTTTTTTTGGTGTGACTCTTTGCTTTCTCTATTGCAACTTGAGTATACCGACTTTCTGATTCCCATAAGCATTGCCATGGCGTTACTGAAAAGCACGGTAAATGCTTCAGAAATTTCCATTTTGGGCACTCGAAAGTTTGCTTTAATGGTTTGGCTTCATCTTTCCATTTTAGGTACTTCAGAAAAGATATCGGCAAAGTCCCTTCTGTTTGAGATATGCACTGCAAATCACTGGCAGCCTCCTCTGTTTGAATGCTGCGAGGAAGAAGGTCCAAGCCATGCAAAAAAGTAAGCTCAATCACTCTCATCAACATAAGTTATAAACTTACAAACTCTTCATTCAAGTAACTTGTCAGCGCCAAACTTTCAACGCCCTGATATCTCTAGAATACTTAACTAAAGATGTAATCCTTATTCTGCCTTTTGGTCTCGTGCTAAAACTGAAAACTTGCCCTTTCTAGCAACTACTTTTTGAAGCTTCTAGGGCATGTTTGGCCAAAAGAGTAGTAGTTGGGGAGAGTGGAGTTGTTAATAGCTCAAAGAGTTTGTGATCCCAACTAAAAAACCTCAATTCCATGACTTATTAACTCTTTACTCGGGAAGGCCTACGACTAAACAACTCTTTCCAAACTCGTCCTTATCGTTTTTGCCTTCTGTATTCAAAATGGGGAAGTATATGTCACCGTGGATGTCTACGGGAAAGTGAAGGCTAGCCAAGAGAGAGCTGATCAAGGTTTCTTTTTAGCTTCAACTTTGAGAAATTTCCTCATTGTTTGGATTTGACATGTCCATAGGTCATCTGTGTGCAAACATGAGAAAGAATATAGATTGAAAACAGGGTTAAATGAAGCCGTTATTTGATGGGATTTTACTTCTTAGCAACTGATGCAAAATTTTATTATGATTCAGGTACAAATTCAAGGTTACTGTTGAGATGAAGGGAGCTTGTGGAACAATTTTGGAATGCTATGGAAACCCTCAAACAAGAAAGAAAGTAGCAGCAGAGCATGCAGCAGAAGGAGCATTATGGTACTTAAAGCATTTGGGATATTGTTTTAAACGATAATTAGGAATCCGAATTGTAAAGAACTACAATTGGGAAATGAGTAAATAATTTCCGAACCCTGACATCTAAATTTTTATTAAACACGTAGTGGCATGTTTGGAAGTGATTTTAAAATTAAAATTACTTTTTTTTTTTCATATTCAAAA

mRNA sequence

ATGGCAGATTATTATGCTTCGGTTGCTGTGAATCTTCCATTTACTGATTTCGCTGTGAAAATTGATTACACAGAGATCGTCGAAGCAGAGCGGAAGAATTTAGGAAAGCAGATGGAGAACACTCGTTCCTGTCCTCGAAGATTGAATGTCAATCTCAAAAATCTTCCTCCAATTAATAACCCGCGCATTGGAAATGAAAATCACCCCTCGATTCCGGCTAAATTTGAGAAATCAAGGTATATTAGGCGCGTTCCTCAGTTTATGCCGCCTAATTACCGGTCGGAAATAAGGCCGAACGAATATTCTGGCTTGCCGATCAAACCAGCGTGTTCTGATTCCGCTCGAGCTCTGAATACGAAGACGATTCCAGAGGCTCCGTCGGATTCCTTCGTTGAAAAGAAAGACAATTGCAAGGAAATAACTTCGAGGTGCTGTTGTTGCAGACATGGCTCGACCAAAGAAGGTACCGGTACTTCAGAAAAGATATCGGCAAAGTCCCTTCTGTTTGAGATATGCACTGCAAATCACTGGCAGCCTCCTCTGTTTGAATGCTGCGAGGAAGAAGGTCCAAGCCATGCAAAAAAGTACAAATTCAAGGTTACTGTTGAGATGAAGGGAGCTTGTGGAACAATTTTGGAATGCTATGGAAACCCTCAAACAAGAAAGAAAGTAGCAGCAGAGCATGCAGCAGAAGGAGCATTATGGTACTTAAAGCATTTGGGATATTGTTTTAAACGATAATTAGGAATCCGAATTGTAAAGAACTACAATTGGGAAATGAGTAAATAATTTCCGAACCCTGACATCTAAATTTTTATTAAACACGTAGTGGCATGTTTGGAAGTGATTTTAAAATTAAAATTACTTTTTTTTTTTCATATTCAAAA

Coding sequence (CDS)

ATGGCAGATTATTATGCTTCGGTTGCTGTGAATCTTCCATTTACTGATTTCGCTGTGAAAATTGATTACACAGAGATCGTCGAAGCAGAGCGGAAGAATTTAGGAAAGCAGATGGAGAACACTCGTTCCTGTCCTCGAAGATTGAATGTCAATCTCAAAAATCTTCCTCCAATTAATAACCCGCGCATTGGAAATGAAAATCACCCCTCGATTCCGGCTAAATTTGAGAAATCAAGGTATATTAGGCGCGTTCCTCAGTTTATGCCGCCTAATTACCGGTCGGAAATAAGGCCGAACGAATATTCTGGCTTGCCGATCAAACCAGCGTGTTCTGATTCCGCTCGAGCTCTGAATACGAAGACGATTCCAGAGGCTCCGTCGGATTCCTTCGTTGAAAAGAAAGACAATTGCAAGGAAATAACTTCGAGGTGCTGTTGTTGCAGACATGGCTCGACCAAAGAAGGTACCGGTACTTCAGAAAAGATATCGGCAAAGTCCCTTCTGTTTGAGATATGCACTGCAAATCACTGGCAGCCTCCTCTGTTTGAATGCTGCGAGGAAGAAGGTCCAAGCCATGCAAAAAAGTACAAATTCAAGGTTACTGTTGAGATGAAGGGAGCTTGTGGAACAATTTTGGAATGCTATGGAAACCCTCAAACAAGAAAGAAAGTAGCAGCAGAGCATGCAGCAGAAGGAGCATTATGGTACTTAAAGCATTTGGGATATTGTTTTAAACGATAA

Protein sequence

MADYYASVAVNLPFTDFAVKIDYTEIVEAERKNLGKQMENTRSCPRRLNVNLKNLPPINNPRIGNENHPSIPAKFEKSRYIRRVPQFMPPNYRSEIRPNEYSGLPIKPACSDSARALNTKTIPEAPSDSFVEKKDNCKEITSRCCCCRHGSTKEGTGTSEKISAKSLLFEICTANHWQPPLFECCEEEGPSHAKKYKFKVTVEMKGACGTILECYGNPQTRKKVAAEHAAEGALWYLKHLGYCFKR
Homology
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BLAST of Lsi07G004360 vs. Swiss-Prot
Match: DCL4_ORYSJ (Endoribonuclease Dicer homolog 4 OS=Oryza sativa subsp. japonica GN=DCL4 PE=2 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 6.8e-24
Identity = 46/80 (57.50%), Postives = 64/80 (80.00%), Query Frame = 1 

Query: 163  SAKSLLFEICTANHWQPPLFECCEEEGPSHAKKYKFKVTVEMKGACGTILECYGNPQTRK 222
            +A+S LFE+C AN+W+PP F+ C+EEGPSH +K+ +KV VE+KGA  T+LEC+ + + +K
Sbjct: 1569 TARSFLFELCAANYWKPPEFKLCKEEGPSHLRKFTYKVVVEIKGASATLLECHSDGKLQK 1628

Query: 223  KVAAEHAAEGALWYLKHLGY 243
            K A EHAA+GALW LK LG+
Sbjct: 1629 KAAQEHAAQGALWCLKQLGH 1648

[Close]
BLAST of Lsi07G004360 vs. Swiss-Prot
Match: RTL1_ARATH (Ribonuclease 3-like protein 1 OS=Arabidopsis thaliana GN=RTL1 PE=2 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 7.5e-23
Identity = 66/204 (32.35%), Postives = 109/204 (53.43%), Query Frame = 1 

Query: 41  TRSCPRRLNVNLKNLPPINNPRIGNENHPSIPAKFEKSRYIRRVPQFMPPNYRSEIRPN- 100
           T+   R + ++LK++PP++   I     PS+    +    +         +++ E   N 
Sbjct: 10  TKKPSRSIIISLKDIPPLDPSSI-----PSMKPMAQDHHNVGMQRFQEKTDFKFEEEDNA 69

Query: 101 --EYSGLPIKPACSDSARALNTKTIPEAPSDSFVEKKDNCKEITSRCCCCRHGSTKEGTG 160
              +S + I P  + S  +L  K  P+   +     K   K+  S+        T+ G  
Sbjct: 70  ISSFSNIQIDPNSTRSI-SLEKKLAPKPDEEHTTTTKPISKDDESK--------TRRG-- 129

Query: 161 TSEKISAKSLLFEICTANHWQPPLFECCEEEGPSHAKKYKFKVTVEMKGACG-TILECYG 220
                SAKS+L E+C +  W+PP++ECC  +GP H + + +KV VE++ + G T+LEC+G
Sbjct: 130 -----SAKSVLHEMCASKRWRPPVYECCNVDGPCHLRLFTYKVMVEIRDSSGKTVLECFG 189

Query: 221 NPQTRKKVAAEHAAEGALWYLKHL 241
           +P+ +KK AAEHAAEGALWYL+H+
Sbjct: 190 DPRRKKKAAAEHAAEGALWYLEHV 192

[Close]
BLAST of Lsi07G004360 vs. Swiss-Prot
Match: DCL4_ARATH (Dicer-like protein 4 OS=Arabidopsis thaliana GN=DCL4 PE=1 SV=2)

HSP 1 Score: 107.1 bits (266), Expect = 2.8e-22
Identity = 49/86 (56.98%), Postives = 60/86 (69.77%), Query Frame = 1 

Query: 157  GTSEKISAKSLLFEICTANHWQPPLFECCEEEGPSHAKKYKFKVTVEMKGACGTILECYG 216
            G S K +AKSLL E C AN W+PP FECCEEEGP H K + +KV +E++ A    LECYG
Sbjct: 1616 GPSSK-TAKSLLHETCVANCWKPPHFECCEEEGPGHLKSFVYKVILEVEDAPNMTLECYG 1675

Query: 217  NPQTRKKVAAEHAAEGALWYLKHLGY 243
              +  KK AAEHAA+ A+W LKH G+
Sbjct: 1676 EARATKKGAAEHAAQAAIWCLKHSGF 1700

[Close]
BLAST of Lsi07G004360 vs. TrEMBL
Match: A0A0A0KYI7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G006230 PE=4 SV=1)

HSP 1 Score: 349.4 bits (895), Expect = 3.7e-93
Identity = 173/226 (76.55%), Postives = 190/226 (84.07%), Query Frame = 1 

Query: 23  YTEIVEAERKNLGKQMENTRSCPR-RLNVNLKNLPPINNPRIGNENHPSIPAKFEKSRYI 82
           Y++IV  ERKN G QMEN  SCP  RLN+NLKNLPPINNPR  + +H SIPAKFEKSRYI
Sbjct: 4   YSDIVGPERKNRGIQMENNPSCPPPRLNINLKNLPPINNPRNVSGSHSSIPAKFEKSRYI 63

Query: 83  RRVPQFMPPNYRSEIRPNEYSGLPIKPACSDSARALNTKTIPEAPS-DSFVEKKDNCKEI 142
           RRVPQFMP ++R EIR N+Y+GLP+K A SDSARALNTKT P APS DSFV KKD CK++
Sbjct: 64  RRVPQFMPSDHRPEIRSNDYAGLPMKLAYSDSARALNTKTFPVAPSADSFVRKKDTCKDL 123

Query: 143 TSRCCCCRHGSTKEGTGTSEKISAKSLLFEICTANHWQPPLFECCEEEGPSHAKKYKFKV 202
            SRC CCRH STKEGT   EK +AKSLLFEICTANHWQPPLFECCEEEGPSHAKKY+FKV
Sbjct: 124 ASRCSCCRHDSTKEGT--PEKRAAKSLLFEICTANHWQPPLFECCEEEGPSHAKKYRFKV 183

Query: 203 TVEMKGACGTILECYGNPQTRKKVAAEHAAEGALWYLKHLGYCFKR 247
            +EMKG C  ++ECYGN QTRKKVAAEHAAEGALWYL HLGY FKR
Sbjct: 184 RIEMKGDCEAVVECYGNLQTRKKVAAEHAAEGALWYLNHLGYRFKR 227

[Close]
BLAST of Lsi07G004360 vs. TrEMBL
Match: B9SMV4_RICCO (Double-stranded RNA binding protein, putative OS=Ricinus communis GN=RCOM_0471170 PE=4 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 1.1e-28
Identity = 89/210 (42.38%), Postives = 113/210 (53.81%), Query Frame = 1 

Query: 46  RRLNVNLKNLPPINNPRIGNENHPSIPAKFEKSRYIRRVPQFMPPNYRSEIRPNEYSGLP 105
           ++ ++NLKNLPPIN P     + P    K  K+   R VP+   P      RP E  G  
Sbjct: 13  KQSHINLKNLPPINPP---TTSIPYYQVKRNKT-ITRYVPKVAKP------RPEEEGG-- 72

Query: 106 IKPACSDSARALNTKTIPEAPSDSFVEKKDNC--KEITSRCCCCRHGSTKEGTGTS---- 165
           +K    D     NTK    A  +   +    C  K I S     +  S     G+     
Sbjct: 73  VKAVKFD--HEANTKADILAEQEEIDDLSSVCAIKHIDSNNFVKKTHSKLNYEGSDNRVL 132

Query: 166 -------EKISAKSLLFEICTANHWQPPLFECCEEEGPSHAKKYKFKVTVEMKGACGTIL 225
                  +++SAKS L EIC AN+W+PPL+ECC+EEGP H + + FKV VEM GA   +L
Sbjct: 133 VDKSSELKRVSAKSQLHEICVANNWKPPLYECCKEEGPCHQRLFTFKVIVEMIGAEYIVL 192

Query: 226 ECYGNPQTRKKVAAEHAAEGALWYLKHLGY 243
           ECYG P+ +KK AAEHAAEGALWYLKHLGY
Sbjct: 193 ECYGIPKIKKKTAAEHAAEGALWYLKHLGY 208

[Close]
BLAST of Lsi07G004360 vs. TrEMBL
Match: A0A067DRG2_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g032079mg PE=4 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 7.8e-27
Identity = 56/86 (65.12%), Postives = 69/86 (80.23%), Query Frame = 1 

Query: 157 GTSEKISAKSLLFEICTANHWQPPLFECCEEEGPSHAKKYKFKVTVEMKGACGTILECYG 216
           G   K+SAKS L EIC ANHW+PP F+CC+EEGP + K + FKVT E++ +  TILEC+G
Sbjct: 55  GAPNKVSAKSKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKVTFEIE-SLNTILECFG 114

Query: 217 NPQTRKKVAAEHAAEGALWYLKHLGY 243
            PQ++KK AAEHAAEGALWYL+HLGY
Sbjct: 115 APQSKKKTAAEHAAEGALWYLEHLGY 139

[Close]
BLAST of Lsi07G004360 vs. TrEMBL
Match: V4SUF1_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10026528mg PE=4 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 3.9e-26
Identity = 78/221 (35.29%), Postives = 113/221 (51.13%), Query Frame = 1 

Query: 27  VEAERKNLGKQMENTRSCPRRLNVNLKNLPPINNPRIGNENHPSIPAKFEKSRYIRRVPQ 86
           ++ E+++ G    N      +   NLKNLPPI+   I +     +  +    R  +++P+
Sbjct: 1   MKMEKRSPGSYPHNNN----KFKPNLKNLPPIDPYSITSTKSHQVNYEIPSWRIAKQMPK 60

Query: 87  FMPPNYRSEIRPNEYSGL-----PIKPACSDSARALNTKTIPEAPSDSFVEKKDNCKEIT 146
                    ++  +   L      I P  + S       +  +   D F EK+       
Sbjct: 61  ------EETMKSGDDDALFCLTKHIDPNSTSSVINNIETSGYDYEDDRFYEKES------ 120

Query: 147 SRCCCCRHGSTKEGTGTSEKISAKSLLFEICTANHWQPPLFECCEEEGPSHAKKYKFKVT 206
                       +  G   K+SAKS L EIC ANHW+PP F+CC+EEGP + K + FKVT
Sbjct: 121 ------------KNEGAPNKVSAKSKLHEICAANHWKPPSFDCCQEEGPCYRKLFTFKVT 180

Query: 207 VEMKGACGTILECYGNPQTRKKVAAEHAAEGALWYLKHLGY 243
            E++ +  TILEC+G PQ++KK AAEHAAEGALWYL+HLGY
Sbjct: 181 FEIE-SLNTILECFGAPQSKKKTAAEHAAEGALWYLEHLGY 192

[Close]
BLAST of Lsi07G004360 vs. TrEMBL
Match: A0A067L0K5_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_27019 PE=4 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 5.0e-26
Identity = 76/206 (36.89%), Postives = 113/206 (54.85%), Query Frame = 1 

Query: 46  RRLNVNLKNLPPINNPRIGNENHPSIPAKFEKSRYIRRVPQFMPPNYRSEIRPNEYSGLP 105
           ++ ++NLKNLP   +P         I   F   RY+ +  +      R E++ +  +   
Sbjct: 3   KKCHINLKNLPLPPDPAYSESQVKKIKTNF---RYVPKAAKPGQEEGRKEVKFDHEANTE 62

Query: 106 IKP-ACSDSARALNTKTIPEAPSDSFVE---KKDNCK----EITSRCCCCRHGSTKEGTG 165
               A  +  +  +T    E   D+ ++   + +N      ++ ++    R  S     G
Sbjct: 63  ADLFADINIVQKQSTNEEEEEEDDASIKHIIESNNTNTSKTQVQNKLNFGRETSFDYQLG 122

Query: 166 TSEKISAKSLLFEICTANHWQPPLFECCEEEGPSHAKKYKFKVTVEMKGA-CGTILECYG 225
            + K+S KS L EIC AN+W+PPLFECC++EGP H + + FKV VE+KGA    ILEC+G
Sbjct: 123 EASKVSPKSQLHEICAANNWKPPLFECCKDEGPCHLRLFTFKVLVEIKGATTEVILECFG 182

Query: 226 NPQTRKKVAAEHAAEGALWYLKHLGY 243
            P+ +KK AA+HAAEGALWYLKHLGY
Sbjct: 183 GPRPKKKAAADHAAEGALWYLKHLGY 205

[Close]
BLAST of Lsi07G004360 vs. TAIR10
Match: AT1G80650.1 (AT1G80650.1 RNAse THREE-like protein 1)

HSP 1 Score: 109.0 bits (271), Expect = 4.2e-24
Identity = 66/204 (32.35%), Postives = 109/204 (53.43%), Query Frame = 1 

Query: 41  TRSCPRRLNVNLKNLPPINNPRIGNENHPSIPAKFEKSRYIRRVPQFMPPNYRSEIRPN- 100
           T+   R + ++LK++PP++   I     PS+    +    +         +++ E   N 
Sbjct: 10  TKKPSRSIIISLKDIPPLDPSSI-----PSMKPMAQDHHNVGMQRFQEKTDFKFEEEDNA 69

Query: 101 --EYSGLPIKPACSDSARALNTKTIPEAPSDSFVEKKDNCKEITSRCCCCRHGSTKEGTG 160
              +S + I P  + S  +L  K  P+   +     K   K+  S+        T+ G  
Sbjct: 70  ISSFSNIQIDPNSTRSI-SLEKKLAPKPDEEHTTTTKPISKDDESK--------TRRG-- 129

Query: 161 TSEKISAKSLLFEICTANHWQPPLFECCEEEGPSHAKKYKFKVTVEMKGACG-TILECYG 220
                SAKS+L E+C +  W+PP++ECC  +GP H + + +KV VE++ + G T+LEC+G
Sbjct: 130 -----SAKSVLHEMCASKRWRPPVYECCNVDGPCHLRLFTYKVMVEIRDSSGKTVLECFG 189

Query: 221 NPQTRKKVAAEHAAEGALWYLKHL 241
           +P+ +KK AAEHAAEGALWYL+H+
Sbjct: 190 DPRRKKKAAAEHAAEGALWYLEHV 192

[Close]
BLAST of Lsi07G004360 vs. TAIR10
Match: AT5G20320.1 (AT5G20320.1 dicer-like 4)

HSP 1 Score: 107.1 bits (266), Expect = 1.6e-23
Identity = 49/86 (56.98%), Postives = 60/86 (69.77%), Query Frame = 1 

Query: 157  GTSEKISAKSLLFEICTANHWQPPLFECCEEEGPSHAKKYKFKVTVEMKGACGTILECYG 216
            G S K +AKSLL E C AN W+PP FECCEEEGP H K + +KV +E++ A    LECYG
Sbjct: 1616 GPSSK-TAKSLLHETCVANCWKPPHFECCEEEGPGHLKSFVYKVILEVEDAPNMTLECYG 1675

Query: 217  NPQTRKKVAAEHAAEGALWYLKHLGY 243
              +  KK AAEHAA+ A+W LKH G+
Sbjct: 1676 EARATKKGAAEHAAQAAIWCLKHSGF 1700

[Close]
BLAST of Lsi07G004360 vs. TAIR10
Match: AT4G00420.2 (AT4G00420.2 Double-stranded RNA-binding domain (DsRBD)-containing protein)

HSP 1 Score: 99.8 bits (247), Expect = 2.6e-21
Identity = 47/85 (55.29%), Postives = 62/85 (72.94%), Query Frame = 1 

Query: 159 SEKISAKSLLFEICTANHWQPPLFECCEEEGPSHAKKYKFKVTVEMKGACG-TILECYGN 218
           +++ SAKS L+ +C+  HW+ PL+E   E GP H K +  KVTVEMK     T+LEC+GN
Sbjct: 80  TQRSSAKSQLYNLCSVRHWKAPLYEYIAE-GPCHMKIFTGKVTVEMKEDSRITVLECFGN 139

Query: 219 PQTRKKVAAEHAAEGALWYLKHLGY 243
           PQ +KK+AAE AAE ALWYLK++GY
Sbjct: 140 PQYKKKIAAEQAAEAALWYLKNVGY 163

[Close]
BLAST of Lsi07G004360 vs. TAIR10
Match: AT1G01040.2 (AT1G01040.2 dicer-like 1)

HSP 1 Score: 50.1 bits (118), Expect = 2.3e-06
Identity = 29/90 (32.22%), Postives = 42/90 (46.67%), Query Frame = 1 

Query: 149  HGSTKEGTGTSEKISAKS--------LLFEICTANHWQPPLFECCEEEGPSHAKKYKFKV 208
            +G+  E  G +E  + K+         L +IC   +W  P + C +E GP+HAK++ F V
Sbjct: 1810 NGNAGEDQGENENGNKKNGHQPFTRQTLNDICLRKNWPMPSYRCVKEGGPAHAKRFTFGV 1869

Query: 209  TVEMKGACGTILECYGNPQTRKKVAAEHAA 231
             V      G   EC G P    K A + AA
Sbjct: 1870 RVNTSDR-GWTDECIGEPMPSVKKAKDSAA 1898

[Close]
BLAST of Lsi07G004360 vs. TAIR10
Match: AT5G45150.1 (AT5G45150.1 RNAse THREE-like protein 3)

HSP 1 Score: 48.5 bits (114), Expect = 6.8e-06
Identity = 24/71 (33.80%), Postives = 37/71 (52.11%), Query Frame = 1 

Query: 160 EKISAKSLLFEICTANHWQPPLFECCEEEGPSHAKKYKFKVTVEMKGACGTILECYGNPQ 219
           E ++ +  L EICT N W  P+F   EE+GP +  K+   V +E+    GT     G+ +
Sbjct: 304 EPVNGRGELIEICTKNKWPRPIFSVQEEKGPKNEPKFVCSVKIEIPNIEGT-FHMKGDIK 363

Query: 220 TRKKVAAEHAA 231
           ++KK A    A
Sbjct: 364 SKKKQAENSLA 373

[Close]
BLAST of Lsi07G004360 vs. NCBI nr
Match: gi|449468964|ref|XP_004152191.1| (PREDICTED: uncharacterized protein LOC101212514 [Cucumis sativus])

HSP 1 Score: 349.4 bits (895), Expect = 5.3e-93
Identity = 173/226 (76.55%), Postives = 190/226 (84.07%), Query Frame = 1 

Query: 23  YTEIVEAERKNLGKQMENTRSCPR-RLNVNLKNLPPINNPRIGNENHPSIPAKFEKSRYI 82
           Y++IV  ERKN G QMEN  SCP  RLN+NLKNLPPINNPR  + +H SIPAKFEKSRYI
Sbjct: 4   YSDIVGPERKNRGIQMENNPSCPPPRLNINLKNLPPINNPRNVSGSHSSIPAKFEKSRYI 63

Query: 83  RRVPQFMPPNYRSEIRPNEYSGLPIKPACSDSARALNTKTIPEAPS-DSFVEKKDNCKEI 142
           RRVPQFMP ++R EIR N+Y+GLP+K A SDSARALNTKT P APS DSFV KKD CK++
Sbjct: 64  RRVPQFMPSDHRPEIRSNDYAGLPMKLAYSDSARALNTKTFPVAPSADSFVRKKDTCKDL 123

Query: 143 TSRCCCCRHGSTKEGTGTSEKISAKSLLFEICTANHWQPPLFECCEEEGPSHAKKYKFKV 202
            SRC CCRH STKEGT   EK +AKSLLFEICTANHWQPPLFECCEEEGPSHAKKY+FKV
Sbjct: 124 ASRCSCCRHDSTKEGT--PEKRAAKSLLFEICTANHWQPPLFECCEEEGPSHAKKYRFKV 183

Query: 203 TVEMKGACGTILECYGNPQTRKKVAAEHAAEGALWYLKHLGYCFKR 247
            +EMKG C  ++ECYGN QTRKKVAAEHAAEGALWYL HLGY FKR
Sbjct: 184 RIEMKGDCEAVVECYGNLQTRKKVAAEHAAEGALWYLNHLGYRFKR 227

[Close]
BLAST of Lsi07G004360 vs. NCBI nr
Match: gi|659108453|ref|XP_008454206.1| (PREDICTED: uncharacterized protein LOC103494682 [Cucumis melo])

HSP 1 Score: 349.0 bits (894), Expect = 6.9e-93
Identity = 174/227 (76.65%), Postives = 193/227 (85.02%), Query Frame = 1 

Query: 23  YTEIVEAERKNLGKQME-NTRSCPRRLNVNLKNLPPINNPRIGNENHPSIPAKFEKSRYI 82
           YTEIV AERKN G QME N  SCP RLN+NLKNLPPINNPR     H SIPAKFEKSRYI
Sbjct: 4   YTEIVGAERKNRGIQMEKNNPSCPPRLNINLKNLPPINNPRNVTGTHSSIPAKFEKSRYI 63

Query: 83  RRVPQFMPPNYRSEIRPNEYSGLP-IKPACSDSARALNTKTIPEAPS-DSFVEKKDNCKE 142
           RRVPQF+P ++R EIR N Y GLP +K ACSDSARA+NTKTIP APS D FV+KKDNCK+
Sbjct: 64  RRVPQFIPFDHRPEIRSNNYPGLPAMKLACSDSARAMNTKTIPVAPSADYFVQKKDNCKD 123

Query: 143 ITSRCCCCRHGSTKEGTGTSEKISAKSLLFEICTANHWQPPLFECCEEEGPSHAKKYKFK 202
           + SRC CCRHGSTKEGT   EK +AKSLLFEICTANHWQPPLFECCEEEGPSHA+KY+FK
Sbjct: 124 LASRCSCCRHGSTKEGT--PEKRAAKSLLFEICTANHWQPPLFECCEEEGPSHARKYRFK 183

Query: 203 VTVEMKGACGTILECYGNPQTRKKVAAEHAAEGALWYLKHLGYCFKR 247
           V++EMKG C  ++ECYGN QTRKK+AAEHAAEGALWYLK+LGY F+R
Sbjct: 184 VSIEMKGDCEAVVECYGNLQTRKKMAAEHAAEGALWYLKNLGYRFER 228

[Close]
BLAST of Lsi07G004360 vs. NCBI nr
Match: gi|1009113100|ref|XP_015871729.1| (PREDICTED: ribonuclease 3-like protein 1 [Ziziphus jujuba])

HSP 1 Score: 136.7 bits (343), Expect = 5.4e-29
Identity = 90/210 (42.86%), Postives = 116/210 (55.24%), Query Frame = 1 

Query: 43  SCPRRLNVNLKNLPPINNPRIGNENHPSIPA--KFEKSRYIR-RVPQFMP--PNYRSEIR 102
           S P R  +NLKNLPPI+ P I    H + P+  K E  R+I   V + +   P    ++ 
Sbjct: 7   SIPNRSIINLKNLPPID-PNIITNTHKTKPSQVKSEPDRWIDIPVSEVIKASPKQEKKLA 66

Query: 103 PNEYSGLPIKPACSDSARALNTKTIPEAPSDSFVEKKDNCKEITSRCCCCRHGSTKEGT- 162
            +++  L      S+SA          A   SF      CK  T +    R   T     
Sbjct: 67  EDDHKAL----VTSNSAYTTTQPHDLRAKDASF--GSSGCKISTKKTNENRASPTDSTLE 126

Query: 163 GTSEKISAKSLLFEICTANHWQPPLFECCEEEGPSHAKKYKFKVTVEMKGACGT-ILECY 222
           G  ++ SAKS L E+C AN W+ PLFECC+EEGPSH K + FKV VE+K A  T +LEC+
Sbjct: 127 GNPKQGSAKSRLHELCAANKWKSPLFECCKEEGPSHMKMFTFKVLVEIKEASNTVVLECF 186

Query: 223 GNPQTRKKVAAEHAAEGALWYLKHLGYCFK 246
           G PQ++KK A EHAAEGALWYLKH+GY  K
Sbjct: 187 GAPQSKKKTAVEHAAEGALWYLKHVGYSSK 209

[Close]
BLAST of Lsi07G004360 vs. NCBI nr
Match: gi|985430064|ref|XP_006465256.2| (PREDICTED: ribonuclease 3-like protein 1 isoform X1 [Citrus sinensis])

HSP 1 Score: 135.2 bits (339), Expect = 1.6e-28
Identity = 82/216 (37.96%), Postives = 112/216 (51.85%), Query Frame = 1 

Query: 27  VEAERKNLGKQMENTRSCPRRLNVNLKNLPPINNPRIGNENHPSIPAKFEKSRYIRRVPQ 86
           ++ E+++ G    N  +   +  +NLKNLPPI+   I +     +  +    R  ++ P+
Sbjct: 1   MKMEKRSPGSYPHNNNN--NKFKLNLKNLPPIDPYSITSTKSHQVKYEIPGWRIAKQTPK 60

Query: 87  FMPPNYRSEIRPNEYSGLPIKPACSDSARALNTKTIPEAPSDSFVEKKDNCKEITSRCCC 146
                          SG        D A    TK I    + S +   +           
Sbjct: 61  ----------EETTKSG-------DDDALFCLTKHIDPNSTSSIINNIETSGYDYEDDRF 120

Query: 147 CRHGSTKEGTGTSEKISAKSLLFEICTANHWQPPLFECCEEEGPSHAKKYKFKVTVEMKG 206
               S  E  G   K+SAKS L EIC ANHW+PPLF+CC+EEGP H K + FKVT E++ 
Sbjct: 121 YEKESKNEVLGAPNKVSAKSKLLEICAANHWKPPLFDCCQEEGPCHRKLFTFKVTFEIE- 180

Query: 207 ACGTILECYGNPQTRKKVAAEHAAEGALWYLKHLGY 243
           +  TILEC+G PQ++KK AAEHAAEGALWYL+HLGY
Sbjct: 181 SLNTILECFGAPQSKKKTAAEHAAEGALWYLEHLGY 196

[Close]
BLAST of Lsi07G004360 vs. NCBI nr
Match: gi|255572781|ref|XP_002527323.1| (PREDICTED: ribonuclease 3-like protein 1 [Ricinus communis])

HSP 1 Score: 135.2 bits (339), Expect = 1.6e-28
Identity = 89/210 (42.38%), Postives = 113/210 (53.81%), Query Frame = 1 

Query: 46  RRLNVNLKNLPPINNPRIGNENHPSIPAKFEKSRYIRRVPQFMPPNYRSEIRPNEYSGLP 105
           ++ ++NLKNLPPIN P     + P    K  K+   R VP+   P      RP E  G  
Sbjct: 13  KQSHINLKNLPPINPP---TTSIPYYQVKRNKT-ITRYVPKVAKP------RPEEEGG-- 72

Query: 106 IKPACSDSARALNTKTIPEAPSDSFVEKKDNC--KEITSRCCCCRHGSTKEGTGTS---- 165
           +K    D     NTK    A  +   +    C  K I S     +  S     G+     
Sbjct: 73  VKAVKFD--HEANTKADILAEQEEIDDLSSVCAIKHIDSNNFVKKTHSKLNYEGSDNRVL 132

Query: 166 -------EKISAKSLLFEICTANHWQPPLFECCEEEGPSHAKKYKFKVTVEMKGACGTIL 225
                  +++SAKS L EIC AN+W+PPL+ECC+EEGP H + + FKV VEM GA   +L
Sbjct: 133 VDKSSELKRVSAKSQLHEICVANNWKPPLYECCKEEGPCHQRLFTFKVIVEMIGAEYIVL 192

Query: 226 ECYGNPQTRKKVAAEHAAEGALWYLKHLGY 243
           ECYG P+ +KK AAEHAAEGALWYLKHLGY
Sbjct: 193 ECYGIPKIKKKTAAEHAAEGALWYLKHLGY 208

The following BLAST results are available for this feature:
BLAST of Lsi07G004360 vs. Swiss-Prot
Match NameE-valueIdentityDescription
DCL4_ORYSJ6.8e-2457.50Endoribonuclease Dicer homolog 4 OS=Oryza sativa subsp. japonica GN=DCL4 PE=2 SV... [more]
RTL1_ARATH7.5e-2332.35Ribonuclease 3-like protein 1 OS=Arabidopsis thaliana GN=RTL1 PE=2 SV=1[more]
DCL4_ARATH2.8e-2256.98Dicer-like protein 4 OS=Arabidopsis thaliana GN=DCL4 PE=1 SV=2[more]
BLAST of Lsi07G004360 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KYI7_CUCSA3.7e-9376.55Uncharacterized protein OS=Cucumis sativus GN=Csa_4G006230 PE=4 SV=1[more]
B9SMV4_RICCO1.1e-2842.38Double-stranded RNA binding protein, putative OS=Ricinus communis GN=RCOM_047117... [more]
A0A067DRG2_CITSI7.8e-2765.12Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g032079mg PE=4 SV=1[more]
V4SUF1_9ROSI3.9e-2635.29Uncharacterized protein OS=Citrus clementina GN=CICLE_v10026528mg PE=4 SV=1[more]
A0A067L0K5_JATCU5.0e-2636.89Uncharacterized protein OS=Jatropha curcas GN=JCGZ_27019 PE=4 SV=1[more]
BLAST of Lsi07G004360 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G80650.14.2e-2432.35 RNAse THREE-like protein 1[more]
AT5G20320.11.6e-2356.98 dicer-like 4[more]
AT4G00420.22.6e-2155.29 Double-stranded RNA-binding domain (DsRBD)-containing protein[more]
AT1G01040.22.3e-0632.22 dicer-like 1[more]
AT5G45150.16.8e-0633.80 RNAse THREE-like protein 3[more]
BLAST of Lsi07G004360 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449468964|ref|XP_004152191.1|5.3e-9376.55PREDICTED: uncharacterized protein LOC101212514 [Cucumis sativus][more]
gi|659108453|ref|XP_008454206.1|6.9e-9376.65PREDICTED: uncharacterized protein LOC103494682 [Cucumis melo][more]
gi|1009113100|ref|XP_015871729.1|5.4e-2942.86PREDICTED: ribonuclease 3-like protein 1 [Ziziphus jujuba][more]
gi|985430064|ref|XP_006465256.2|1.6e-2837.96PREDICTED: ribonuclease 3-like protein 1 isoform X1 [Citrus sinensis][more]
gi|255572781|ref|XP_002527323.1|1.6e-2842.38PREDICTED: ribonuclease 3-like protein 1 [Ricinus communis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR014720dsRBD_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0051252 regulation of RNA metabolic process
biological_process GO:0016246 RNA interference
biological_process GO:0070918 production of small RNA involved in gene silencing by RNA
biological_process GO:0044700 single organism signaling
biological_process GO:0048316 seed development
biological_process GO:0090501 RNA phosphodiester bond hydrolysis
biological_process GO:0009628 response to abiotic stimulus
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0065008 regulation of biological quality
biological_process GO:0030422 production of siRNA involved in RNA interference
biological_process GO:0006259 DNA metabolic process
biological_process GO:0051607 defense response to virus
biological_process GO:0006464 cellular protein modification process
biological_process GO:0007154 cell communication
cellular_component GO:0005575 cellular_component
molecular_function GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0003674 molecular_function
molecular_function GO:0003723 RNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi07G004360.1Lsi07G004360.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014720Double-stranded RNA-binding domainGENE3DG3DSA:3.30.160.20coord: 164..238
score: 9.8
IPR014720Double-stranded RNA-binding domainSMARTSM00358DRBM_3coord: 164..238
score: 2.
IPR014720Double-stranded RNA-binding domainPROFILEPS50137DS_RBDcoord: 163..239
score: 10
NoneNo IPR availablePFAMPF14709DND1_DSRMcoord: 163..238
score: 1.7
NoneNo IPR availableunknownSSF54768dsRNA-binding domain-likecoord: 163..242
score: 5.5

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Lsi07G004360Csa4G006230Cucumber (Chinese Long) v2culsiB312
Lsi07G004360CSPI04G01790Wild cucumber (PI 183967)cpilsiB311
Lsi07G004360Cucsa.096200Cucumber (Gy14) v1cgylsiB113
Lsi07G004360CmaCh14G013630Cucurbita maxima (Rimu)cmalsiB256
Lsi07G004360CmoCh14G013960Cucurbita moschata (Rifu)cmolsiB244
Lsi07G004360Cla012730Watermelon (97103) v1lsiwmB438
Lsi07G004360MELO3C017858Melon (DHL92) v3.5.1lsimeB447
Lsi07G004360ClCG07G012380Watermelon (Charleston Gray)lsiwcgB406
Lsi07G004360MELO3C017858.2Melon (DHL92) v3.6.1lsimedB465
Lsi07G004360Cla97C07G139180Watermelon (97103) v2lsiwmbB405
Lsi07G004360Bhi01G002785Wax gourdlsiwgoB558
Lsi07G004360Cp4.1LG03g13530Cucurbita pepo (Zucchini)cpelsiB515
Lsi07G004360CsGy4G001720Cucumber (Gy14) v2cgyblsiB285
Lsi07G004360Carg06516Silver-seed gourdcarlsiB109
Lsi07G004360CsaV3_4G001760Cucumber (Chinese Long) v3cuclsiB331
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi07G004360Bottle gourd (USVL1VR-Ls)lsilsiB117
Lsi07G004360Cucumber (Gy14) v1cgylsiB136
Lsi07G004360Cucurbita maxima (Rimu)cmalsiB449
Lsi07G004360Cucurbita maxima (Rimu)cmalsiB450
Lsi07G004360Cucurbita maxima (Rimu)cmalsiB736
Lsi07G004360Cucurbita moschata (Rifu)cmolsiB174
Lsi07G004360Cucurbita moschata (Rifu)cmolsiB436
Lsi07G004360Cucurbita moschata (Rifu)cmolsiB437
Lsi07G004360Cucurbita moschata (Rifu)cmolsiB727
Lsi07G004360Cucurbita pepo (Zucchini)cpelsiB472
Lsi07G004360Cucurbita pepo (Zucchini)cpelsiB476
Lsi07G004360Cucurbita pepo (Zucchini)cpelsiB516
Lsi07G004360Wild cucumber (PI 183967)cpilsiB137
Lsi07G004360Wild cucumber (PI 183967)cpilsiB546
Lsi07G004360Cucumber (Chinese Long) v2culsiB138
Lsi07G004360Melon (DHL92) v3.5.1lsimeB430
Lsi07G004360Watermelon (Charleston Gray)lsiwcgB387
Lsi07G004360Watermelon (Charleston Gray)lsiwcgB392
Lsi07G004360Cucumber (Gy14) v2cgyblsiB502
Lsi07G004360Melon (DHL92) v3.6.1lsimedB451
Lsi07G004360Silver-seed gourdcarlsiB182
Lsi07G004360Silver-seed gourdcarlsiB183
Lsi07G004360Cucumber (Chinese Long) v3cuclsiB150
Lsi07G004360Cucumber (Chinese Long) v3cuclsiB568
Lsi07G004360Watermelon (97103) v2lsiwmbB420