Lsi07G004340 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi07G004340
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionThymidylate kinase
Locationchr07 : 4631212 .. 4641387 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATAAAAACGAAAAAAAAGATGAGAAACCCTCATCATTTCCTTCTTCCTCTCCCTCACCCTCACAGTCGCGGATCCAATCTGAACAGCCTCCGAGGACGTAATATTCCCTGTTACGGCGAGTTTGGCGTCGTCGTCACCAGTGTATTCTTATCCTTCAGCACCCACGTAAGCATATATATCCGATTTCCAATCGACATTTGTAATGGAATAAATGATTGATTGATGTTACCGACGGGTTACCATATATGTCTTGGCTATTCCAGTTTTGCATTTTCCCACTCTGATATTTGAAAGTGTTGGTAGATTGGAAGCACTATTTGAATTGAAAGCATTGATCGATCGGAAGTTTTATCTTACTGAAACTGAAACTGGAAGTTTTGAACGTTCTCGTTTATTAAAAGTCTTGAAAAGCCTTGTTTATTGAAGGTCTTCGAAAGTTTTGTTCTTCTAAAATGTTGAAGAACCAATAGTTTCACACTTTGAGAGTTTTAGTTTGAAAGTTTTGGTTAAATGAAAGTTTTGGTTAATCAAAACGTTTGGTTTTGAAAGCTTGTTTGATTGAAGGATTTTGGTCTTGAAAGCTCCGTTTGCAACAAAGCTTTAAATAGAAGTTTTGATTTTTTTGAAAGTTTGATAGTTGCTTTAGAAAGTTTTGCAAGGAGTTGTAAAAGAAAATCAATTTCAATACTTGATATGAGAATTGCATATTGAGGAGTATTGTTGTACTCATTTTTGCTTTGTTTTTCCAAAATGTTTTCAAATGAAAGATTAGTCCAAAATATATTATCTCCTATTGAATCCAGTTGGTTGGAATCACTTATGTCTCATTTGGTTATGCCATTTCATTTTCCATACCACTGTTCCTTTTCTTTTTTTGGTTGTAAGATCTACTCACATTTTTTTATTATGATGTTGAATTTAGCAGCCTTCCTTCATGTGAGCCGGAACTTTAGCTTGGGTTTGAGGACCAGGGTCGTCTGCATCTGTGGTAGTTTTAAGTTCTATTTGTGGTAGTTAATTGACTTTGGGATAAAGCTTTTGAGCATACAATTTTACGCAGTTTCAAGGTCAGGACATGATCCATGCTTGCTTCCACATTCTATAAGCCATTGTAAGATTAATTTATTGTTTTACCTTGAATTTATGATGTTTATTCTTTAGATAATTATTATTATATATTGGGAAGATTCAATTTTTACCCTTAAAAGTGTCAAGTTTATCAATTTTCACCATAAACTTCTAATTTTTATTTTATCTTATTGGACTCGAGACTTTGATAAGTGTTGTAATTTCTACCATCTATTCACTTTCCACTAATTCAATCACCAATTTCAACAAAAAGACGAGGCAAAAATCTTCAAATACCCACTAATTTCAGTAATATTAAATTTTGCACAAATTTTAGTTTAGTTAATGCACAAATTAGCCACTGAATAGCTTTATTAAAACCCAAAAACTTTAACAGAAAACATTGCTCTCATGTCTGCTTTCTATGAAATCCTGTTAATTTTAGACTATATATGTGTTTTGTAATTCATGGGATGTCTATGAGAATACATTTATTATTATTGTTATCCTTTAATTATTTTTTGAACCTCCAACTTCAAGGTAAGGAGTACATAACAATTATCCTCAGCTACGCTCACTTTGGCTTTTGAGAATATTTTAATGATATTTGGAACCTAACCTTATCATAGGGAAAAGTTATAACACCTTTTTAAGTTCAAGGTTAAGACTGCAACACTCACCTAAGTTTGAGGTGCAATTTGATGGTTTAAAGTAACAATTGATACAACATAACAAGTATAGGGGTAAAAATAGAAATTTTCCCTTATATATTTGTTTTTGGTGGGCTATGATGTGTTAGAAATACATTTGAATTTTTTTTTGAAGGTGTATTTTTTTTCCCTGAAAAATCAAATATGCATAAGATATAGTTTCTGCTTCAATCACGATCACTTACAAATTTCTTTTGAAAATGATTGATATAGGAGACCTCTCTGATGTTTGTTTTTCCTATTTAGGAGTTTTGAAGTAGTAACAACTAGAATATCCTCGAGTTTTCTACTAAAAGTTCCGTATAAGAATTTTATCCGGAAGATCCAAATGGGAACTAATCAGAATTCCATCTCAAGGGGTTGCAACAGTAACTCTAGAGGAGCCTTGGTGGTTCTAGAAGGGTTGGATCGATGTGGGAAGACTACGCAGTCCAGTAGATTAGTCCAGTACTTAGAAGGACTTGGCCATTCTGCTGAACTATGGCGGTTTCCTGACAGAACCACTAGTGTTGGACAGATGATATCTTCCTATCTTTCTAACGAATCAGAGCTGGATGACCACACAATACATCTTCTTTTCAGTGCTAACCGATGGGAGAAGAGGTTTTTAATTTTTCTTTATACAACCTGCATATTAGTCTTTTATATTGATAAATTTTCAGCTCCTAACAAGTGAGGAGCTTTCTATATTGTTATTAAGTGGCAAGCTTTGAAATGAAAATATTGATACCTGGTTTTAGAAGTTCCAAGCAACAGTAGTTGCAAACTTGTGGCCCAAAACCATTTTGTTGCATGTAATATAGTGAGGATATAGTATATTTCTACCCCAAGAGTATGTGATTTGTGTTTATTTACTATAATGTCTATGCAGATCCTTAATGGACACTAAGTTGAAAGGTGGAACCACTCTTATTCTTGATCGGTATTCTTACTCAGGGGTGGCCTTTTCGTATGCCAAAGGACTTGGCTTTGAATGGTGTAAGGTAAAAATACAAATAAACAATTTGGATGAATCATTTGTTTATTTATATGAATGTTCTGTTTCTATTTGTATTTTCTAAATGTGGGATGCTAAAATTCTGATTATGGCTTAGCTTTGAACCTCCATGTTTGAAGGCTTTGCTTCACTATATTTTGTGAGGGGGCCTTCTCATTCCCCTATCCCTAAGGAGTGTCTGGGGTGAGGAGATGAGATGAGATGAGTTGAGATATGAACCCCACAGACATATAAACTCTCCAGACATCATATCTCCAGACATTATATCTCAACTCAGCGCCCGAAATAGCTCCTAAGTGATTTTGGTTATAGTAATATATTCCTGGAGTTTGAAGAGACCCCTCGGATGCTCTCTCCTCTCCTCCCAGCTTGTCAGCTCTAGCCTTAAAAAATATCATTCTTGGTCTCCTCTTGCCTATGTTTTTGGCTTCCAGTCAACGATTTAATCTCCTGGAACGTGTTTGGTTTTTTCTTTGGTAATTTGCTCACATTGTACTTTTCAGAGATATGGAAGTCAAAATTATTTCTTTAATGTCTAGTTCCAAGATTATCTAAGTCTAAGTTTTGGTATCTAAAGATTAAGAAGTTCTCCCAAGTGATAGCCAAGTTTTCAAGACAAAATTACTCTTTCGGCTTGGTAAAATTTTCATCTTTAATTGAGGCCAGTGGTTTAAAATTTTAAGAAATTAATCCTCCAATCCCAAAAGAGCTTTGTCAGAAAGTATAAAGTTAAGTTGGGATTTTCTGTTTTGGTGATCCAACGAAAATGATTTGTTGGAATATTAGAGGTTTGGGAGATTTATCTAAAAGAGTTAGTTGAAGAAGTTTTTACTGCATATTTGTTCTAAGTTGGTTCGTATTAAAGTAACCAAAAAGTCCTTCTATAGAAGATATATTAAATCATTGTGGAGTTTAAGAGATGTAAATTGGGTTGGTATTTTTGGTTGTTCGGGTGGAAGTCTTCTGCAAAATGTTTAAATGTGCTGCTGTGGATCAGTCTAAATGGTAGTCTCAATACCTCCAAAGAAAGTTGTCATTTTATTTTAAGTCATCGGCATGCCCTCTTTGTTATGCAGATGGAGATTATCTTTCTCATTTTTCCTTAGCTGCTCTTATTCGTCAAAGTGTTGGTTCAAGCTCCTCTCTTATTTCTACATCCAGTGGGAATTTTCACGTGTCTTAACTGAAAATTTTCTTCAGCTGATTGTTAGCTAAAAAATCAAGTTTATTATGGATTAATGTGGTGTCTATGAGAAGAAAGAAATAACACGATTTCCGAAGATAAGTTTGGTTCTTTTGATTCTTTTTGTGCTTTTGTTAACATATAAACGGATTTCGGATTCGGCATCTGATGACCTTAATATTCTTCTGCATCCCCTTTGACTTGGCAATGTCATCCTTGTTTGTCTTAAAGAGCTTCTAAGAGTGAAAATTATCCCCACAAACCAACATGGGGTCTTTCAGCATACTTTGTCCTCACGCATATGCTTCCTAAGAGATTTTCTAGGTCACCCAACATAGAATTGTTCTAAGCTAAGCACGCTTAACTTCGGAGTTCCTATGATTGAGCCACCGAAAAGAAAGGTGCACTTTGTTGGTATAGGTAGTAACTTTCAATTATTTAAAGTCTTTCTTAATCATACTTTCATATTCTCAAGATCTCTCTCATTCGGATGTAATCTCAGTTCATTCATGTACCCCTTCTAAACCCATAAACCGAGGCATTACAAAAAGCCTTTACATGGTGTTCCCTTTCCAAATTCTTTACTCCATTACTCTTCCTATGATATATCTCATAAGTGAGATGCTTTTCTTTCTCCTTCGTAATTCATGCTTTTTATTTGTTTTCTTTTTTTACTTCTTAATGGGGTTTGCATCTTTTGAGCATTAGTCTCCTTTCATTGCCCAATGAAAAAAATTGTTTTCTGGTTTTAAAAAACAATATATACTTGTTTGTTTGTGTCCTAAAAAAAGAAAAGAAAAGAAAAGAAAAAACAAATGTTGATGTTATGTTTGTCCTTTGTAGGCACCGGAGGCTGGCTTGCTAGCTCCAGACCTAGTACTGTACCTAGACATATCTCCAGAGGTCGGTTAAATCATTATATCATTTCATTCTGGAACAATTTTAAATGCATTTATTAGGATGGTTTACCAATTTTAAATGCATTTATTAGGATGGTTTACCGTGATTCATCTTTTCCAATTTGTAAATGTACTGAAGCTACATATTGACATTTTTGGTTTGGGACTCTTCTATTCGTAGATGATATGGCAACTTTAACCACGTCTTTACATATCATAGAAGCAATTGTAAATTTTGTATTGGATTTTTGTATGGAACTCAATCAATATATGGTTTGTAGCATACAGTAAGCCATTGTTCAGGTAGAGCAGATGTTATTAGAGACTTATTTTAAAGTTCTATCATGTCACTGATGATGATGGATACAAGAACAATAAATTAATACCCAAGAGAATAATTGTTTCTTTTATACAATCTATGATATCAAAAGATTATACTATTTGCTTGACTTTATCCAGGAGTACTGCCATTTTTTATGTTAATGATGAAACTTGACTTTGATTTACAACCCTCACCAACCAGATGAATTCTCAAGTTCTAAACCGTTCAAATCTGTATTATGATTGCTTAGTGAATAAAGAGTTAATTTGAATGATCAGATGGCTGCAGAAAGAGGAGATTATGGATGTGAGAGATACGAGCAGATTGAGTTCCAGTACAAAGTTGCTAGGAGCTATCAAGTTTTGCTTGATTCTAAATGGGAGGTAACTTGTTTTTCATTTGTATCTTGGAAACATTGATTCTCCAAGACTTTGAGATTGGTGTGTGGTATGGTCTAGGATGCCTGGACGTGGACACTCCTTTGGTAACCATTTGGTTTTTAGTTTTTGAAAATTAAGCCTACAAATACCTATGCCACCTCTAAATTTCTTGTTACTTTTTATCAATGTTTTCAATAACCAAGCCAAATTTTGAAAACTAAAGAAGTAGTTTTTATTTTTGGAATTTGGCTAAGAATTAACTCTAATACTTAAGAAAGATGTAAACCATTGAAAGAAAATGTGAGAAAATAGACTTAATTTTCAAAAACCAAAAACCAAAAACGAAATGGTTACCAAACGGGGCCTAAATAATTACCTATTTTTTTTTCCCCAAACTTGGTTGACATGGCTTGAACACTTTTTGGGGAAGTTAGATAAATTAGAAGAGAAGCCTTAACTGATCCACTTACAAAAACTTCCACAGCCAATTTGAGAGGGCTGAATTCTCTCCCAGAACATCTTCACCCTTTTCCCAAATAACTGATCCCCCCTACTGTCCCCTCTGCCACCTAATAAGGGTCTCCCACCCTAACTAACTACTACCCTTTAGTTTTCCTTTTTGTACCTCTTCACATACCTATTCATAATAGGAGGTTTCTTCTTTCCCTTTCTTTAATACATATGTACGATAGGGAACCTAACTTAAGCACCAGCTGTATGTTGGTTGCTTCTCGTGTTCTAGTTTGTGCTTCTTATAGTTCAAACTGAAAAATGAAGGATAAATTTTGAAAGGAGCTGCATTAAAATATTTGGTAATCACAGATTATTTACAATGGCTGCTGAGGCTCCTCTTTTCACTTCCTTCCCCTCATCTCAAATGATCTTCTCCTTTCTACCCGACACTGCTGCTTGAAGCTGTCAAGTATGAAGAGACTATTTGTGTTCAAGTGTAGGGTAGAATCCAAGCTCTTTACAATTGACTATAATGGTAGATTTAAGTATAGGAAGATCCTTTTATGTAGCCTAAGTAGCCTCAAGGAGCAATCCTCTAATGATCAAGCTCATGTATCTTTTATTAGAATGATAATGTGTTTCATACAAGAGGGGAAGACTCATATTTATATAGTTTGTTGTAAATCGAGGTAAAAGGGGAACTAACCTAGATATTACCCAATTAACCCAATTCTTCCTACATCATTCTACCCCTCCAAAAAGAAATCAGTTTCAAAGAGAAGAAATGAAGCAAACAAGAAATGAAATAAACTCGTTCAATAGAGTATGACCAAACCAACCTCCTACATCTTGAACAAAATTATTCTGATCAAAGAGATAAATATTCTACATCGGCCATAAACCCATAAAAGAGGTTTCCATCAAGCTCATTCAAATCTGTAATCAGAGGACCAATCACCAAAAAATCACCTATTGAAGAGAACCCTTCAAGAAAATGTGTGGAAAAGAATTTGGGCCATATGAAATTGTCAAGAAAGGTCTTTTTGACTTCCACCTTGACGTTTAGAGTTTCGGTGTTCGATATCTCTTCCTCATCTTCTTCGTTGGATTTTTCTTCTTCACTCGAGACTACTTCTGAGTCAACATCTTCAAATTCTTCTTTTTCTTCTACTTTGTTTGCATGATGTTTGCCCCAATCATCTCTATCAACTACATGAGTCTCAACAAGATTTTTCCTAGATTTATCCTTAAGATTTTTTTTTTGTTTGAAAAGTTTCCAACCGAGATACCTTTGTTTTTTCTTTGGTGTACAAAATCAATTCTTTCTTGAACTCTTGCAAATGAATTGATAGTTGATCTATATTTTGTGTTATTTTTCCCAATGAATGTCAGATTTCTTTTGCTGTTTTCTTAATTTTCTCAAATGCTACGGGATCGAATTAGTCGTTTTGTTGGATTCTTGAATATGTTTCAATCTCCTAGTGGGTATAGGACCGATTCATTGTTTTTCTTGAATAGGAATCAACCTTTCTTGGTCGTGTTTCATAATCAAAAGAGTAATTTTGAGCTTTAAATGTTCTTGGGTTGTAAAAATCCATTCTTGCCGATTCTTTAATTTTTCTTCTTTCTTAATTTGAATTTTAAAGGGGTCTCCTAAATATATGAGATGTTTGACAATGAGCACAACACTCAAAGTTCCCTCTTGCAATCGGCATCGGTAAGTGTTTTTTGGTCTTCCATTGACGGCAATCAACGTTGACTCAGGCTGCTGATTTGATACCAAATTGATATAGGCTAGGTAGCCTCAAGGAGTAATCCTCCAAGAATCAAGCTTGTGAATCTTTTATTAGAATGATAATATGTTCCATACAAGAGGGAAAAGACTTAGAGTTTATTATAAGTGGGGTAAAAAGGGAATTAACCTAGAATATACTCAATTAACCTTATTCTTCCGACGTCATCTTTTCTATTAAAAGATGCCACTTTAACTGGTTTGAACCATCCTACAAAAGGTGCAGTAGAAAATCTTTTGTCAATACACGTCTCAGTCAAAACTTCTTTAAAAAGGTGAAGAATGACGATTGCCACACTTGGCATCAGAAAATCTCCAAGATCAATAGTAGAGGTCATTTTGCGTAAGTCTCAAAACTCCTCGACAATGTAGTCCCAAGTGTTAAAACTTCTCAACATTGGTTCATCAACGGGGATGAATATTCAACATTTTCTAACATAGATGGGCTCCAACTAAGAATAGGAAGGGCATGATACAGTGAAGGCACCTCCCTGAATGCTGAGGGAGAGATTGAATCAACAGAGATAAACTACTACAATTTTTTTAGAGCAGATGGTAGTCCCAGGTCCAAGGCCTAGATTGGCATATAAATAGTAATTGGAGTTGATGGCTTGAAAGACTTTTCGTGGATGTGTAAATAGCGGGAGTGGTTAAGGTAAGATGATAGTAACCGAGATGATTTCTTAGCAGAAGTTTTTTTAAAAAGCTTGGAATATCATCAGTATCAATATGATTGAGGTGTTTATAGAGTTGTTTGAAAATGGTCTCATAAATGGAAGCATAAATTAAAATTATCCCAATAAGAGGGTGGCTGAAATGTGAAAGATTTTAAACCTATGAAGTTAGTTTCATCACTTTGCATATGACGATTTCACCTGTAGGGTCCTGTGGAGCTAATGGATGAGAGTTTCAGATATATTTAACCAAGATAGGAAGTACCTTCGGTGATTGTTTGTCTATCTCCCTATCTATGATCAAAATTATCTGCAAGCAAATCAAAACAATAATATTCAACGAATTTATTCACAAGGAATCAATGCTTTGGGCTTTTATCTTCGTCTTATTTTAAGCTGGTTTGTTTGTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTCCTTTTTTGGGTGGAACAAAAGAATTGACTGACTGTATTTTGAGCTTTCCTTTGATTTAATTGCAGATTGTTGATGCTTGCCGACCCATGGAAGATATTGAGAAAGACCTACAAGAGATTGTCCTGGACTGTGTCAAGAGATGCCAAAATGGGAAACCTCTTTCCCATCTTTGGTCAAGTTGA

mRNA sequence

ATAAAAACGAAAAAAAAGATGAGAAACCCTCATCATTTCCTTCTTCCTCTCCCTCACCCTCACAGTCGCGGATCCAATCTGAACAGCCTCCGAGGACGTAATATTCCCTGTTACGGCGAGTTTGGCGTCGTCGTCACCAGTGTATTCTTATCCTTCAGCACCCACCAGCCTTCCTTCATGTGAGCCGGAACTTTAGCTTGGGTTTGAGGACCAGGGTCGTCTGCATCTGTGTTTCAAGGTCAGGACATGATCCATGCTTGCTTCCACATTCTATAAGCCATTGAGTTTTGAAGTAGTAACAACTAGAATATCCTCGAGTTTTCTACTAAAAGTTCCGTATAAGAATTTTATCCGGAAGATCCAAATGGGAACTAATCAGAATTCCATCTCAAGGGGTTGCAACAGTAACTCTAGAGGAGCCTTGGTGGTTCTAGAAGGGTTGGATCGATGTGGGAAGACTACGCAGTCCAGTAGATTAGTCCAGTACTTAGAAGGACTTGGCCATTCTGCTGAACTATGGCGGTTTCCTGACAGAACCACTAGTGTTGGACAGATGATATCTTCCTATCTTTCTAACGAATCAGAGCTGGATGACCACACAATACATCTTCTTTTCAGTGCTAACCGATGGGAGAAGAGATCCTTAATGGACACTAAGTTGAAAGGTGGAACCACTCTTATTCTTGATCGGTATTCTTACTCAGGGGTGGCCTTTTCGTATGCCAAAGGACTTGGCTTTGAATGGTGTAAGGCACCGGAGGCTGGCTTGCTAGCTCCAGACCTAGTACTGTACCTAGACATATCTCCAGAGCATACAGTAAGCCATTGTTCAGAAAGAGGAGATTATGGATGTGAGAGATACGAGCAGATTGAGTTCCAGTACAAAGTTGCTAGGAGCTATCAAGTTTTGCTTGATTCTAAATGGGAGGTAACTTGTTTTTCATTTATTGTTGATGCTTGCCGACCCATGGAAGATATTGAGAAAGACCTACAAGAGATTGTCCTGGACTGTGTCAAGAGATGCCAAAATGGGAAACCTCTTTCCCATCTTTGGTCAAGTTGA

Coding sequence (CDS)

ATGCTTGCTTCCACATTCTATAAGCCATTGAGTTTTGAAGTAGTAACAACTAGAATATCCTCGAGTTTTCTACTAAAAGTTCCGTATAAGAATTTTATCCGGAAGATCCAAATGGGAACTAATCAGAATTCCATCTCAAGGGGTTGCAACAGTAACTCTAGAGGAGCCTTGGTGGTTCTAGAAGGGTTGGATCGATGTGGGAAGACTACGCAGTCCAGTAGATTAGTCCAGTACTTAGAAGGACTTGGCCATTCTGCTGAACTATGGCGGTTTCCTGACAGAACCACTAGTGTTGGACAGATGATATCTTCCTATCTTTCTAACGAATCAGAGCTGGATGACCACACAATACATCTTCTTTTCAGTGCTAACCGATGGGAGAAGAGATCCTTAATGGACACTAAGTTGAAAGGTGGAACCACTCTTATTCTTGATCGGTATTCTTACTCAGGGGTGGCCTTTTCGTATGCCAAAGGACTTGGCTTTGAATGGTGTAAGGCACCGGAGGCTGGCTTGCTAGCTCCAGACCTAGTACTGTACCTAGACATATCTCCAGAGCATACAGTAAGCCATTGTTCAGAAAGAGGAGATTATGGATGTGAGAGATACGAGCAGATTGAGTTCCAGTACAAAGTTGCTAGGAGCTATCAAGTTTTGCTTGATTCTAAATGGGAGGTAACTTGTTTTTCATTTATTGTTGATGCTTGCCGACCCATGGAAGATATTGAGAAAGACCTACAAGAGATTGTCCTGGACTGTGTCAAGAGATGCCAAAATGGGAAACCTCTTTCCCATCTTTGGTCAAGTTGA

Protein sequence

MLASTFYKPLSFEVVTTRISSSFLLKVPYKNFIRKIQMGTNQNSISRGCNSNSRGALVVLEGLDRCGKTTQSSRLVQYLEGLGHSAELWRFPDRTTSVGQMISSYLSNESELDDHTIHLLFSANRWEKRSLMDTKLKGGTTLILDRYSYSGVAFSYAKGLGFEWCKAPEAGLLAPDLVLYLDISPEHTVSHCSERGDYGCERYEQIEFQYKVARSYQVLLDSKWEVTCFSFIVDACRPMEDIEKDLQEIVLDCVKRCQNGKPLSHLWSS
Homology
[Close]
BLAST of Lsi07G004340 vs. Swiss-Prot
Match: ZEUS1_ARATH (Thymidylate kinase OS=Arabidopsis thaliana GN=ZEU1 PE=2 SV=1)

HSP 1 Score: 305.4 bits (781), Expect = 6.0e-82
Identity = 155/241 (64.32%), Postives = 183/241 (75.93%), Query Frame = 1 

Query: 33  IRKIQMGTNQNSISRGCNSNS----RGALVVLEGLDRCGKTTQSSRLVQYLEGLGHSAEL 92
           I++  +    ++ S G  + S    RGAL+VLEGLDR GK+TQ ++L+ +L GLGH  EL
Sbjct: 33  IKRSSVRMESSNFSSGVRTESSVKPRGALIVLEGLDRSGKSTQCAKLLSFLNGLGHPTEL 92

Query: 93  WRFPDRTTSVGQMISSYLSNESELDDHTIHLLFSANRWEKRSLMDTKLKGGTTLILDRYS 152
           WRFPDR TSVGQMIS+YLSN+S+LDDHTIHLLFSANRWEKRSLM+ KLK GTTLI+DRYS
Sbjct: 93  WRFPDRETSVGQMISAYLSNKSQLDDHTIHLLFSANRWEKRSLMEEKLKTGTTLIVDRYS 152

Query: 153 YSGVAFSYAKGLGFEWCKAPEAGLLAPDLVLYLDISPEHTVSHCSERGDYGCERYEQIEF 212
           YSGVAFS AKGL  EWCKAPE GLLAPD VLYLDISPE      +ERG YG ERYE++EF
Sbjct: 153 YSGVAFSSAKGLDIEWCKAPEIGLLAPDSVLYLDISPERA----AERGGYGDERYERVEF 212

Query: 213 QYKVARSYQVLLDSKWEVTCFSFIVDACRPMEDIEKDLQEIVLDCVKRCQNGKPLSHLWS 270
           Q KVA  YQ L DS W+      I++A   ME++EK +Q++VLD VK C  GKPLS LWS
Sbjct: 213 QKKVADFYQTLGDSSWK------IINASDAMEEVEKKIQQVVLDQVKECTEGKPLSLLWS 263

[Close]
BLAST of Lsi07G004340 vs. Swiss-Prot
Match: KTHY_MOUSE (Thymidylate kinase OS=Mus musculus GN=Dtymk PE=1 SV=2)

HSP 1 Score: 196.4 bits (498), Expect = 3.9e-49
Identity = 99/221 (44.80%), Postives = 146/221 (66.06%), Query Frame = 1 

Query: 51  SNSRGALVVLEGLDRCGKTTQSSRLVQYLEGLGHSAELWRFPDRTTSVGQMISSYLSNES 110
           ++ RGAL+VLEG+DR GKTTQ  +LV  L   GH AEL RFP+R+T +G++++SYL  ++
Sbjct: 2   ASRRGALIVLEGVDRAGKTTQGLKLVTALCASGHRAELLRFPERSTEIGKLLNSYLEKKT 61

Query: 111 ELDDHTIHLLFSANRWEKRSLMDTKLKGGTTLILDRYSYSGVAFSYAK-GLGFEWCKAPE 170
           EL+DH++HLLFSANRWE+  L+  KL  G TL+LDRY++SGVAF+ AK     +WCK P+
Sbjct: 62  ELEDHSVHLLFSANRWEQVPLIKAKLNQGVTLVLDRYAFSGVAFTGAKENFSLDWCKQPD 121

Query: 171 AGLLAPDLVLYLDISPEHTVSHCSERGDYGCERYEQIEFQYKVARSYQVLLDSK---WEV 230
            GL  PDL+L+L +     +   + RG++G ERYE   FQ +V   +Q L++ K   W+V
Sbjct: 122 VGLPKPDLILFLQLQ----LLDAAARGEFGLERYETGTFQKQVLLCFQQLMEEKNLNWKV 181

Query: 231 TCFSFIVDACRPMEDIEKDLQEIVLDCVKRCQNGKPLSHLW 268
                 VDA + +E++ K+++    D ++     +PL  LW
Sbjct: 182 ------VDASKSIEEVHKEIRAHSEDAIRNAAQ-RPLGELW 211

[Close]
BLAST of Lsi07G004340 vs. Swiss-Prot
Match: KTHY_HUMAN (Thymidylate kinase OS=Homo sapiens GN=DTYMK PE=1 SV=4)

HSP 1 Score: 194.9 bits (494), Expect = 1.1e-48
Identity = 98/215 (45.58%), Postives = 144/215 (66.98%), Query Frame = 1 

Query: 54  RGALVVLEGLDRCGKTTQSSRLVQYLEGLGHSAELWRFPDRTTSVGQMISSYLSNESELD 113
           RGAL+VLEG+DR GK+TQS +LV+ L   GH AEL RFP+R+T +G+++SSYL  +S+++
Sbjct: 5   RGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKKSDVE 64

Query: 114 DHTIHLLFSANRWEKRSLMDTKLKGGTTLILDRYSYSGVAFSYAK-GLGFEWCKAPEAGL 173
           DH++HLLFSANRWE+  L+  KL  G TL++DRY++SGVAF+ AK     +WCK P+ GL
Sbjct: 65  DHSVHLLFSANRWEQVPLIKEKLSQGVTLVVDRYAFSGVAFTGAKENFSLDWCKQPDVGL 124

Query: 174 LAPDLVLYLDISPEHTVSHCSERGDYGCERYEQIEFQYKVARSYQVLLDSKWEVTCFSFI 233
             PDLVL+L +     ++  ++RG +G ERYE   FQ +  R +  L+    + T    +
Sbjct: 125 PKPDLVLFLQLQ----LADAAKRGAFGHERYENGAFQERALRCFHQLMK---DTTLNWKM 184

Query: 234 VDACRPMEDIEKDLQEIVLDCVKRCQNGKPLSHLW 268
           VDA + +E + +D++ +  D + R    KPL  LW
Sbjct: 185 VDASKSIEAVHEDIRVLSEDAI-RTATEKPLGELW 211

[Close]
BLAST of Lsi07G004340 vs. Swiss-Prot
Match: KTHY_SCHPO (Thymidylate kinase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=tmp1 PE=2 SV=2)

HSP 1 Score: 184.1 bits (466), Expect = 2.0e-45
Identity = 92/201 (45.77%), Postives = 128/201 (63.68%), Query Frame = 1 

Query: 50  NSNSRGALVVLEGLDRCGKTTQSSRLVQYLEGLGHSAELWRFPDRTTSVGQMISSYLSNE 109
           +  +RG L+V+EGLDR GK+TQ   LV  L      AEL++FPDRTT++G+ I  YL   
Sbjct: 2   SKQNRGRLIVIEGLDRSGKSTQCQLLVDKLISQHEKAELFKFPDRTTAIGKKIDDYLKES 61

Query: 110 SELDDHTIHLLFSANRWEKRSLMDTKLKGGTTLILDRYSYSGVAFSYAKGLGFEWCKAPE 169
            +L+D  IHLLFSANRWE    +  ++  G T ILDRY++SG+AFS AKGL +EWCK+P+
Sbjct: 62  VQLNDQVIHLLFSANRWETIQYIYEQINKGVTCILDRYAFSGIAFSAAKGLDWEWCKSPD 121

Query: 170 AGLLAPDLVLYLDISPEHTVSHCSERGDYGCERYEQIEFQYKVARSYQVLLDSKWEVTCF 229
            GL  PDLV++L++ P    +    RG YG ERYE+IE Q KV +++Q L     E    
Sbjct: 122 RGLPRPDLVIFLNVDPRIAAT----RGQYGEERYEKIEMQEKVLKNFQRLQKEFREEGLE 181

Query: 230 SFIVDACRPMEDIEKDLQEIV 251
              +DA   +ED+   + ++V
Sbjct: 182 FITLDASSSLEDVHSQIVDLV 198

[Close]
BLAST of Lsi07G004340 vs. Swiss-Prot
Match: KTHY_DICDI (Thymidylate kinase OS=Dictyostelium discoideum GN=dtymk PE=3 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 2.4e-43
Identity = 89/207 (43.00%), Postives = 132/207 (63.77%), Query Frame = 1 

Query: 54  RGALVVLEGLDRCGKTTQSSRLVQYLEGLGH-SAELWRFPDRTTSVGQMISSYLSNESEL 113
           RG  ++ EG+DR GK+TQ   L  ++  +     +  RFPDRTT +GQ+I+ YL N + +
Sbjct: 18  RGLFILFEGVDRVGKSTQVQSLTNHISNVQKLPTKSLRFPDRTTPIGQIINQYLQNATNM 77

Query: 114 DDHTIHLLFSANRWEKRSLMDTKLKGGTTLILDRYSYSGVAFSYAKGLGFEWCKAPEAGL 173
           DD  +HLLFS+NRWE R  +   L  GT +++DRYSYSGVA+S AKG+ F+WC A E GL
Sbjct: 78  DDRALHLLFSSNRWEARDSILELLNNGTNIVVDRYSYSGVAYSAAKGIDFDWCYACEKGL 137

Query: 174 LAPDLVLYLDISPEHTVSHCSERGDYGCERYEQIEFQYKVARSY-QVLLDSKWEVTCFSF 233
             PDL+ YL +S E      ++RG+YG ERYE++EFQ K+ + Y + L+D +W+      
Sbjct: 138 PKPDLIFYLSMSSE----DATKRGEYGGERYEKLEFQKKIKQIYEEKLVDDQWK------ 197

Query: 234 IVDACRPMEDIEKDLQEIVLDCVKRCQ 259
           I++A R +++I  ++  I     K+ Q
Sbjct: 198 IINANRSIDEISNEISSIFDSEFKKIQ 214

[Close]
BLAST of Lsi07G004340 vs. TrEMBL
Match: A0A0A0KTN6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G006250 PE=3 SV=1)

HSP 1 Score: 417.2 bits (1071), Expect = 1.6e-113
Identity = 212/270 (78.52%), Postives = 233/270 (86.30%), Query Frame = 1 

Query: 1   MLASTFYKPLSFEVVTTRISSSFLLKVPYKNFIRKIQMGTNQNSISRGCNSNSRGALVVL 60
           MLASTF+KPL+F V TTRISSSF  KV  KNFIRKIQMGTNQNSISR  +SNSRGALVVL
Sbjct: 1   MLASTFFKPLNFGVATTRISSSFRPKVVCKNFIRKIQMGTNQNSISRDSSSNSRGALVVL 60

Query: 61  EGLDRCGKTTQSSRLVQYLEGLGHSAELWRFPDRTTSVGQMISSYLSNESELDDHTIHLL 120
           EGLDRCGKTTQ+SRL QYLEGLGHS ELWRFPDRTTSVGQMISSYLSNES+LDDHTIHLL
Sbjct: 61  EGLDRCGKTTQASRLAQYLEGLGHSVELWRFPDRTTSVGQMISSYLSNESQLDDHTIHLL 120

Query: 121 FSANRWEKRSLMDTKLKGGTTLILDRYSYSGVAFSYAKGLGFEWCKAPEAGLLAPDLVLY 180
           FSANRWEKRSLM+TKLKGGTT+ILDRYSYSGVAFS AKGL FEWCKAPE GLLAPDLVLY
Sbjct: 121 FSANRWEKRSLMETKLKGGTTIILDRYSYSGVAFSCAKGLNFEWCKAPEVGLLAPDLVLY 180

Query: 181 LDISPEHTVSHCSERGDYGCERYEQIEFQYKVARSYQ-VLLDSKWEVTCFSFIVDACRPM 240
           L+ISP+      +ER  YG ERYEQIEFQ +V  +Y+ +++ S W+      IVDAC+PM
Sbjct: 181 LNISPK----MAAERKGYGSERYEQIEFQNQVVEAYRDLMIGSNWQ------IVDACQPM 240

Query: 241 EDIEKDLQEIVLDCVKRCQNGKPLSHLWSS 270
           E IEK+LQEIVLDCVK+CQNG PLS LWS+
Sbjct: 241 EVIEKELQEIVLDCVKKCQNGAPLSDLWSN 260

[Close]
BLAST of Lsi07G004340 vs. TrEMBL
Match: M5WV75_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011118mg PE=3 SV=1)

HSP 1 Score: 334.3 bits (856), Expect = 1.3e-88
Identity = 169/232 (72.84%), Postives = 188/232 (81.03%), Query Frame = 1 

Query: 38  MGTNQNSIS-RGCNSNSRGALVVLEGLDRCGKTTQSSRLVQYLEGLGHSAELWRFPDRTT 97
           M  N ++ S RG   +SRGALVVLEGLDRCGKTTQS+RLV  LE LGHSAELWRFPDRTT
Sbjct: 1   MANNNHTCSLRGGKEDSRGALVVLEGLDRCGKTTQSTRLVANLEKLGHSAELWRFPDRTT 60

Query: 98  SVGQMISSYLSNESELDDHTIHLLFSANRWEKRSLMDTKLKGGTTLILDRYSYSGVAFSY 157
           SVGQMISSYLSN+S+LDDHTIHLLFSANRWEKRSLM++KLK G TL++DRYSYSGVAFS 
Sbjct: 61  SVGQMISSYLSNKSQLDDHTIHLLFSANRWEKRSLMESKLKSGITLVVDRYSYSGVAFSS 120

Query: 158 AKGLGFEWCKAPEAGLLAPDLVLYLDISPEHTVSHCSERGDYGCERYEQIEFQYKVARSY 217
           AKGL   WCKAPE GLLAPDLV+YLDI PE      +ERG YG ERYEQ+EFQ KV ++Y
Sbjct: 121 AKGLDISWCKAPEIGLLAPDLVVYLDIPPE----KAAERGGYGGERYEQLEFQKKVGQNY 180

Query: 218 QVLLDSKWEVTCFSFIVDACRPMEDIEKDLQEIVLDCVKRCQNGKPLSHLWS 269
           QVL    W+      I+DAC PMEDIE+ LQE+VLDCVK CQ GKPLS LWS
Sbjct: 181 QVLRGPTWK------IIDACSPMEDIEEHLQEMVLDCVKTCQEGKPLSCLWS 222

[Close]
BLAST of Lsi07G004340 vs. TrEMBL
Match: A0A061EG90_THECC (P-loop containing nucleoside triphosphate hydrolases superfamily protein OS=Theobroma cacao GN=TCM_019290 PE=3 SV=1)

HSP 1 Score: 333.6 bits (854), Expect = 2.3e-88
Identity = 172/266 (64.66%), Postives = 201/266 (75.56%), Query Frame = 1 

Query: 5   TFYKPLSFEVVTTRISSSFLLKVPYKNFIRKIQMGTNQNSIS-RGCNSNSRGALVVLEGL 64
           T  K L+      R S +      YK  +R I++  N N+ S  G ++ SRGALVV EGL
Sbjct: 9   TVSKALNLGAFAVRRSLNLGSNFSYKCSVRSIRIMENANTSSLMGADNESRGALVVFEGL 68

Query: 65  DRCGKTTQSSRLVQYLEGLGHSAELWRFPDRTTSVGQMISSYLSNESELDDHTIHLLFSA 124
           DR GKT+Q  RLV YLEGLGHS ELWRFPDRTTSVGQMIS+YL+N S+LDD TIHLLFSA
Sbjct: 69  DRSGKTSQCGRLVSYLEGLGHSVELWRFPDRTTSVGQMISAYLTNNSQLDDRTIHLLFSA 128

Query: 125 NRWEKRSLMDTKLKGGTTLILDRYSYSGVAFSYAKGLGFEWCKAPEAGLLAPDLVLYLDI 184
           NRWEKRSLM+TKLK GTTLI+DRYSYSGVAFS AKGL FEWCKAPE GL+APDLV+YLDI
Sbjct: 129 NRWEKRSLMETKLKAGTTLIVDRYSYSGVAFSSAKGLDFEWCKAPEIGLIAPDLVVYLDI 188

Query: 185 SPEHTVSHCSERGDYGCERYEQIEFQYKVARSYQVLLDSKWEVTCFSFIVDACRPMEDIE 244
            PE      +ERG YG ERYEQ+EFQ KVA+ Y++L DS W+      IVDAC+P+ED+E
Sbjct: 189 VPEKA----AERGGYGGERYEQLEFQRKVAQRYKLLEDSSWK------IVDACQPLEDVE 248

Query: 245 KDLQEIVLDCVKRCQNGKPLSHLWSS 270
           K ++EIVL+ V  CQ GKP+S LWSS
Sbjct: 249 KQVKEIVLEHVMTCQRGKPVSSLWSS 264

[Close]
BLAST of Lsi07G004340 vs. TrEMBL
Match: A0A072TF88_MEDTR (P-loop nucleoside triphosphate hydrolase superfamily protein OS=Medicago truncatula GN=MTR_0274s0020 PE=3 SV=1)

HSP 1 Score: 333.2 bits (853), Expect = 3.0e-88
Identity = 173/266 (65.04%), Postives = 202/266 (75.94%), Query Frame = 1 

Query: 5   TFYKPLSFEVVTTRISSSFLLKVPYKNFIRKIQMGTNQNSIS-RGCNSNSRGALVVLEGL 64
           T  K LSF  +    S +F +K+  K   R+I+M     S S  G    SRGAL+VLEGL
Sbjct: 8   TALKSLSFRALVLPNSLNFQVKLSSKCSPRRIRMEAGNLSCSIEGNKKESRGALIVLEGL 67

Query: 65  DRCGKTTQSSRLVQYLEGLGHSAELWRFPDRTTSVGQMISSYLSNESELDDHTIHLLFSA 124
           DR GK++Q SRLV YLEG G SAELWRFPDRTT+VGQMIS+YL+N S+LDDHTIHLLFSA
Sbjct: 68  DRSGKSSQCSRLVSYLEGEGLSAELWRFPDRTTNVGQMISAYLTNASQLDDHTIHLLFSA 127

Query: 125 NRWEKRSLMDTKLKGGTTLILDRYSYSGVAFSYAKGLGFEWCKAPEAGLLAPDLVLYLDI 184
           NRWEKRSLM+TKLK GTTLI+DRYSYSGVAFS AKGL  +WCK+PE GLLAPDLV YLDI
Sbjct: 128 NRWEKRSLMETKLKSGTTLIVDRYSYSGVAFSSAKGLDIDWCKSPENGLLAPDLVAYLDI 187

Query: 185 SPEHTVSHCSERGDYGCERYEQIEFQYKVARSYQVLLDSKWEVTCFSFIVDACRPMEDIE 244
           SP+      +ERG YG ERYE++EFQ KVA  Y+VL D+ W+      IVDAC+P+ED+E
Sbjct: 188 SPDKA----AERGGYGDERYEKLEFQQKVAEHYKVLHDASWK------IVDACQPIEDVE 247

Query: 245 KDLQEIVLDCVKRCQNGKPLSHLWSS 270
           K LQEI L CVK+CQ GKPLS LWS+
Sbjct: 248 KQLQEIALACVKQCQQGKPLSSLWST 263

[Close]
BLAST of Lsi07G004340 vs. TrEMBL
Match: A0A059DF74_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_A01374 PE=3 SV=1)

HSP 1 Score: 331.3 bits (848), Expect = 1.1e-87
Identity = 166/261 (63.60%), Postives = 197/261 (75.48%), Query Frame = 1 

Query: 8   KPLSFEVVTTRISSSFLLKVPYKNFIRKIQMGTNQNSISRGCNSNSRGALVVLEGLDRCG 67
           K ++F  V  + S  FL K   ++ IR I+M   QN+   G  S SRGAL+VLEGLDR G
Sbjct: 11  KSINFGAVAAKKSFIFLPKFSQQSCIRGIRMEKGQNNCLNGGGSESRGALIVLEGLDRSG 70

Query: 68  KTTQSSRLVQYLEGLGHSAELWRFPDRTTSVGQMISSYLSNESELDDHTIHLLFSANRWE 127
           K++QS+RL+ +LEGLGHS ELWRFPDRTTS+GQMISSYLSNES+LDD T HLLFSANRWE
Sbjct: 71  KSSQSTRLLSFLEGLGHSTELWRFPDRTTSIGQMISSYLSNESQLDDCTTHLLFSANRWE 130

Query: 128 KRSLMDTKLKGGTTLILDRYSYSGVAFSYAKGLGFEWCKAPEAGLLAPDLVLYLDISPEH 187
           KRSLM+ KL+ GTTLI+DRYSYSG+AFS AKGL FEWCKAPE GL+APDLV YLDI PE 
Sbjct: 131 KRSLMEKKLRSGTTLIVDRYSYSGIAFSSAKGLDFEWCKAPEIGLVAPDLVFYLDIPPEK 190

Query: 188 TVSHCSERGDYGCERYEQIEFQYKVARSYQVLLDSKWEVTCFSFIVDACRPMEDIEKDLQ 247
                +ERG YG ERYE++EFQ KV +SYQ L D+ W+      IVDA  PM++I K +Q
Sbjct: 191 A----AERGGYGNERYEKLEFQRKVGKSYQALRDASWQ------IVDALLPMDEIAKQMQ 250

Query: 248 EIVLDCVKRCQNGKPLSHLWS 269
           E  ++CV  CQ GK LSHLWS
Sbjct: 251 ETAINCVLECQKGKRLSHLWS 261

[Close]
BLAST of Lsi07G004340 vs. TAIR10
Match: AT5G59440.3 (AT5G59440.3 P-loop containing nucleoside triphosphate hydrolases superfamily protein)

HSP 1 Score: 305.4 bits (781), Expect = 3.4e-83
Identity = 155/241 (64.32%), Postives = 183/241 (75.93%), Query Frame = 1 

Query: 33  IRKIQMGTNQNSISRGCNSNS----RGALVVLEGLDRCGKTTQSSRLVQYLEGLGHSAEL 92
           I++  +    ++ S G  + S    RGAL+VLEGLDR GK+TQ ++L+ +L GLGH  EL
Sbjct: 41  IKRSSVRMESSNFSSGVRTESSVKPRGALIVLEGLDRSGKSTQCAKLLSFLNGLGHPTEL 100

Query: 93  WRFPDRTTSVGQMISSYLSNESELDDHTIHLLFSANRWEKRSLMDTKLKGGTTLILDRYS 152
           WRFPDR TSVGQMIS+YLSN+S+LDDHTIHLLFSANRWEKRSLM+ KLK GTTLI+DRYS
Sbjct: 101 WRFPDRETSVGQMISAYLSNKSQLDDHTIHLLFSANRWEKRSLMEEKLKTGTTLIVDRYS 160

Query: 153 YSGVAFSYAKGLGFEWCKAPEAGLLAPDLVLYLDISPEHTVSHCSERGDYGCERYEQIEF 212
           YSGVAFS AKGL  EWCKAPE GLLAPD VLYLDISPE      +ERG YG ERYE++EF
Sbjct: 161 YSGVAFSSAKGLDIEWCKAPEIGLLAPDSVLYLDISPERA----AERGGYGDERYERVEF 220

Query: 213 QYKVARSYQVLLDSKWEVTCFSFIVDACRPMEDIEKDLQEIVLDCVKRCQNGKPLSHLWS 270
           Q KVA  YQ L DS W+      I++A   ME++EK +Q++VLD VK C  GKPLS LWS
Sbjct: 221 QKKVADFYQTLGDSSWK------IINASDAMEEVEKKIQQVVLDQVKECTEGKPLSLLWS 271

[Close]
BLAST of Lsi07G004340 vs. NCBI nr
Match: gi|659108443|ref|XP_008454201.1| (PREDICTED: thymidylate kinase isoform X1 [Cucumis melo])

HSP 1 Score: 433.7 bits (1114), Expect = 2.3e-118
Identity = 219/269 (81.41%), Postives = 234/269 (86.99%), Query Frame = 1 

Query: 1   MLASTFYKPLSFEVVTTRISSSFLLKVPYKNFIRKIQMGTNQNSISRGCNSNSRGALVVL 60
           MLASTFYKPL+F VVTTR+SS F  KV  KNFIRKIQMGTNQNSISRG +SNSRGALVVL
Sbjct: 1   MLASTFYKPLNFGVVTTRLSSCFRPKVVCKNFIRKIQMGTNQNSISRGSSSNSRGALVVL 60

Query: 61  EGLDRCGKTTQSSRLVQYLEGLGHSAELWRFPDRTTSVGQMISSYLSNESELDDHTIHLL 120
           EGLDRCGKTTQSSRL QYLEGLGHS ELWRFPDRTTSVGQMISSYLSNES+LDDHT+HLL
Sbjct: 61  EGLDRCGKTTQSSRLTQYLEGLGHSVELWRFPDRTTSVGQMISSYLSNESQLDDHTVHLL 120

Query: 121 FSANRWEKRSLMDTKLKGGTTLILDRYSYSGVAFSYAKGLGFEWCKAPEAGLLAPDLVLY 180
           FSANRWEKRSLM+TKLKGGTTLILDRYSYSGVAFS AKGL  EWCKAPE GL APDLVLY
Sbjct: 121 FSANRWEKRSLMETKLKGGTTLILDRYSYSGVAFSCAKGLDLEWCKAPEVGLPAPDLVLY 180

Query: 181 LDISPEHTVSHCSERGDYGCERYEQIEFQYKVARSYQVLLDSKWEVTCFSFIVDACRPME 240
           L+ISPE      +ERG YG ERYE+I+FQ KV +SYQVLL S W+      IVDACRPME
Sbjct: 181 LEISPE----MAAERGGYGSERYERIDFQNKVIKSYQVLLGSNWQ------IVDACRPME 240

Query: 241 DIEKDLQEIVLDCVKRCQNGKPLSHLWSS 270
            IEK+LQE VLDCVK+CQNG PLSHLWS+
Sbjct: 241 VIEKELQETVLDCVKKCQNGAPLSHLWSN 259

[Close]
BLAST of Lsi07G004340 vs. NCBI nr
Match: gi|449468962|ref|XP_004152190.1| (PREDICTED: thymidylate kinase isoform X1 [Cucumis sativus])

HSP 1 Score: 417.2 bits (1071), Expect = 2.2e-113
Identity = 212/270 (78.52%), Postives = 233/270 (86.30%), Query Frame = 1 

Query: 1   MLASTFYKPLSFEVVTTRISSSFLLKVPYKNFIRKIQMGTNQNSISRGCNSNSRGALVVL 60
           MLASTF+KPL+F V TTRISSSF  KV  KNFIRKIQMGTNQNSISR  +SNSRGALVVL
Sbjct: 1   MLASTFFKPLNFGVATTRISSSFRPKVVCKNFIRKIQMGTNQNSISRDSSSNSRGALVVL 60

Query: 61  EGLDRCGKTTQSSRLVQYLEGLGHSAELWRFPDRTTSVGQMISSYLSNESELDDHTIHLL 120
           EGLDRCGKTTQ+SRL QYLEGLGHS ELWRFPDRTTSVGQMISSYLSNES+LDDHTIHLL
Sbjct: 61  EGLDRCGKTTQASRLAQYLEGLGHSVELWRFPDRTTSVGQMISSYLSNESQLDDHTIHLL 120

Query: 121 FSANRWEKRSLMDTKLKGGTTLILDRYSYSGVAFSYAKGLGFEWCKAPEAGLLAPDLVLY 180
           FSANRWEKRSLM+TKLKGGTT+ILDRYSYSGVAFS AKGL FEWCKAPE GLLAPDLVLY
Sbjct: 121 FSANRWEKRSLMETKLKGGTTIILDRYSYSGVAFSCAKGLNFEWCKAPEVGLLAPDLVLY 180

Query: 181 LDISPEHTVSHCSERGDYGCERYEQIEFQYKVARSYQ-VLLDSKWEVTCFSFIVDACRPM 240
           L+ISP+      +ER  YG ERYEQIEFQ +V  +Y+ +++ S W+      IVDAC+PM
Sbjct: 181 LNISPK----MAAERKGYGSERYEQIEFQNQVVEAYRDLMIGSNWQ------IVDACQPM 240

Query: 241 EDIEKDLQEIVLDCVKRCQNGKPLSHLWSS 270
           E IEK+LQEIVLDCVK+CQNG PLS LWS+
Sbjct: 241 EVIEKELQEIVLDCVKKCQNGAPLSDLWSN 260

[Close]
BLAST of Lsi07G004340 vs. NCBI nr
Match: gi|659108449|ref|XP_008454204.1| (PREDICTED: thymidylate kinase isoform X2 [Cucumis melo])

HSP 1 Score: 383.6 bits (984), Expect = 2.8e-103
Identity = 190/232 (81.90%), Postives = 203/232 (87.50%), Query Frame = 1 

Query: 38  MGTNQNSISRGCNSNSRGALVVLEGLDRCGKTTQSSRLVQYLEGLGHSAELWRFPDRTTS 97
           MGTNQNSISRG +SNSRGALVVLEGLDRCGKTTQSSRL QYLEGLGHS ELWRFPDRTTS
Sbjct: 1   MGTNQNSISRGSSSNSRGALVVLEGLDRCGKTTQSSRLTQYLEGLGHSVELWRFPDRTTS 60

Query: 98  VGQMISSYLSNESELDDHTIHLLFSANRWEKRSLMDTKLKGGTTLILDRYSYSGVAFSYA 157
           VGQMISSYLSNES+LDDHT+HLLFSANRWEKRSLM+TKLKGGTTLILDRYSYSGVAFS A
Sbjct: 61  VGQMISSYLSNESQLDDHTVHLLFSANRWEKRSLMETKLKGGTTLILDRYSYSGVAFSCA 120

Query: 158 KGLGFEWCKAPEAGLLAPDLVLYLDISPEHTVSHCSERGDYGCERYEQIEFQYKVARSYQ 217
           KGL  EWCKAPE GL APDLVLYL+ISPE      +ERG YG ERYE+I+FQ KV +SYQ
Sbjct: 121 KGLDLEWCKAPEVGLPAPDLVLYLEISPEMA----AERGGYGSERYERIDFQNKVIKSYQ 180

Query: 218 VLLDSKWEVTCFSFIVDACRPMEDIEKDLQEIVLDCVKRCQNGKPLSHLWSS 270
           VLL S W+      IVDACRPME IEK+LQE VLDCVK+CQNG PLSHLWS+
Sbjct: 181 VLLGSNWQ------IVDACRPMEVIEKELQETVLDCVKKCQNGAPLSHLWSN 222

[Close]
BLAST of Lsi07G004340 vs. NCBI nr
Match: gi|778689615|ref|XP_011652986.1| (PREDICTED: thymidylate kinase isoform X2 [Cucumis sativus])

HSP 1 Score: 367.5 bits (942), Expect = 2.0e-98
Identity = 183/233 (78.54%), Postives = 202/233 (86.70%), Query Frame = 1 

Query: 38  MGTNQNSISRGCNSNSRGALVVLEGLDRCGKTTQSSRLVQYLEGLGHSAELWRFPDRTTS 97
           MGTNQNSISR  +SNSRGALVVLEGLDRCGKTTQ+SRL QYLEGLGHS ELWRFPDRTTS
Sbjct: 1   MGTNQNSISRDSSSNSRGALVVLEGLDRCGKTTQASRLAQYLEGLGHSVELWRFPDRTTS 60

Query: 98  VGQMISSYLSNESELDDHTIHLLFSANRWEKRSLMDTKLKGGTTLILDRYSYSGVAFSYA 157
           VGQMISSYLSNES+LDDHTIHLLFSANRWEKRSLM+TKLKGGTT+ILDRYSYSGVAFS A
Sbjct: 61  VGQMISSYLSNESQLDDHTIHLLFSANRWEKRSLMETKLKGGTTIILDRYSYSGVAFSCA 120

Query: 158 KGLGFEWCKAPEAGLLAPDLVLYLDISPEHTVSHCSERGDYGCERYEQIEFQYKVARSYQ 217
           KGL FEWCKAPE GLLAPDLVLYL+ISP+      +ER  YG ERYEQIEFQ +V  +Y+
Sbjct: 121 KGLNFEWCKAPEVGLLAPDLVLYLNISPKMA----AERKGYGSERYEQIEFQNQVVEAYR 180

Query: 218 -VLLDSKWEVTCFSFIVDACRPMEDIEKDLQEIVLDCVKRCQNGKPLSHLWSS 270
            +++ S W+      IVDAC+PME IEK+LQEIVLDCVK+CQNG PLS LWS+
Sbjct: 181 DLMIGSNWQ------IVDACQPMEVIEKELQEIVLDCVKKCQNGAPLSDLWSN 223

[Close]
BLAST of Lsi07G004340 vs. NCBI nr
Match: gi|1009166594|ref|XP_015901677.1| (PREDICTED: thymidylate kinase isoform X1 [Ziziphus jujuba])

HSP 1 Score: 362.5 bits (929), Expect = 6.6e-97
Identity = 187/265 (70.57%), Postives = 209/265 (78.87%), Query Frame = 1 

Query: 5   TFYKPLSFEVVTTRISSSFLLKV-PYKNFIRKIQMGTNQNSISRGCNSNSRGALVVLEGL 64
           T  K L+F VV  + S  F L +   K  IR IQM  N  S S G NS+SRGALVVLEGL
Sbjct: 8   TVCKALNFGVVAVQRSLKFQLNIYRCKGSIRHIQMEINHKSNSSGANSDSRGALVVLEGL 67

Query: 65  DRCGKTTQSSRLVQYLEGLGHSAELWRFPDRTTSVGQMISSYLSNESELDDHTIHLLFSA 124
           DRCGKTTQS RL+ YLEGLGH AELWRFPDR+TSVGQMISSYLSN+S+LDDHT+HLLFSA
Sbjct: 68  DRCGKTTQSGRLLTYLEGLGHPAELWRFPDRSTSVGQMISSYLSNQSQLDDHTVHLLFSA 127

Query: 125 NRWEKRSLMDTKLKGGTTLILDRYSYSGVAFSYAKGLGFEWCKAPEAGLLAPDLVLYLDI 184
           NRWEKRSLM+TKLK GTTLI+DRYSYSGVAFS AKGL FEWCKAPE GLLAPD+VLYL+I
Sbjct: 128 NRWEKRSLMETKLKSGTTLIVDRYSYSGVAFSSAKGLDFEWCKAPEIGLLAPDVVLYLNI 187

Query: 185 SPEHTVSHCSERGDYGCERYEQIEFQYKVARSYQVLLDSKWEVTCFSFIVDACRPMEDIE 244
            PE      +ERG YG ERYE++EFQ KVA+SYQ L D+ W+      I+DA RP+EDIE
Sbjct: 188 PPEKA----AERGGYGGERYEKLEFQRKVAQSYQNLHDASWK------IIDASRPVEDIE 247

Query: 245 KDLQEIVLDCVKRCQNGKPLSHLWS 269
           K LQEIV DC+K CQ GKPLS LWS
Sbjct: 248 KQLQEIVSDCIKTCQKGKPLSFLWS 262

The following BLAST results are available for this feature:
BLAST of Lsi07G004340 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ZEUS1_ARATH6.0e-8264.32Thymidylate kinase OS=Arabidopsis thaliana GN=ZEU1 PE=2 SV=1[more]
KTHY_MOUSE3.9e-4944.80Thymidylate kinase OS=Mus musculus GN=Dtymk PE=1 SV=2[more]
KTHY_HUMAN1.1e-4845.58Thymidylate kinase OS=Homo sapiens GN=DTYMK PE=1 SV=4[more]
KTHY_SCHPO2.0e-4545.77Thymidylate kinase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=tmp... [more]
KTHY_DICDI2.4e-4343.00Thymidylate kinase OS=Dictyostelium discoideum GN=dtymk PE=3 SV=1[more]
BLAST of Lsi07G004340 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KTN6_CUCSA1.6e-11378.52Uncharacterized protein OS=Cucumis sativus GN=Csa_4G006250 PE=3 SV=1[more]
M5WV75_PRUPE1.3e-8872.84Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011118mg PE=3 SV=1[more]
A0A061EG90_THECC2.3e-8864.66P-loop containing nucleoside triphosphate hydrolases superfamily protein OS=Theo... [more]
A0A072TF88_MEDTR3.0e-8865.04P-loop nucleoside triphosphate hydrolase superfamily protein OS=Medicago truncat... [more]
A0A059DF74_EUCGR1.1e-8763.60Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_A01374 PE=3 SV=1[more]
BLAST of Lsi07G004340 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G59440.33.4e-8364.32 P-loop containing nucleoside triphosphate hydrolases superfamily pro... [more]
BLAST of Lsi07G004340 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659108443|ref|XP_008454201.1|2.3e-11881.41PREDICTED: thymidylate kinase isoform X1 [Cucumis melo][more]
gi|449468962|ref|XP_004152190.1|2.2e-11378.52PREDICTED: thymidylate kinase isoform X1 [Cucumis sativus][more]
gi|659108449|ref|XP_008454204.1|2.8e-10381.90PREDICTED: thymidylate kinase isoform X2 [Cucumis melo][more]
gi|778689615|ref|XP_011652986.1|2.0e-9878.54PREDICTED: thymidylate kinase isoform X2 [Cucumis sativus][more]
gi|1009166594|ref|XP_015901677.1|6.6e-9770.57PREDICTED: thymidylate kinase isoform X1 [Ziziphus jujuba][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006233dTDP biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0004798thymidylate kinase activity
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR018095Thymidylate_kin_CS
IPR018094Thymidylate_kinase
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006233 dTDP biosynthetic process
biological_process GO:0046939 nucleotide phosphorylation
biological_process GO:0006206 pyrimidine nucleobase metabolic process
biological_process GO:0016310 phosphorylation
biological_process GO:0009793 embryo development ending in seed dormancy
cellular_component GO:0005575 cellular_component
cellular_component GO:0044444 cytoplasmic part
cellular_component GO:0043231 intracellular membrane-bounded organelle
cellular_component GO:0005829 cytosol
cellular_component GO:0005739 mitochondrion
cellular_component GO:0005654 nucleoplasm
molecular_function GO:0005524 ATP binding
molecular_function GO:0004798 thymidylate kinase activity
molecular_function GO:0016787 hydrolase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi07G004340.1Lsi07G004340.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018094Thymidylate kinaseHAMAPMF_00165Thymidylate_kinasecoord: 56..254
score: 15
IPR018094Thymidylate kinaseTIGRFAMsTIGR00041TIGR00041coord: 54..245
score: 3.3
IPR018095Thymidylate kinase, conserved sitePROSITEPS01331THYMIDYLATE_KINASEcoord: 143..155
scor
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3DG3DSA:3.40.50.300coord: 51..261
score: 8.2
IPR027417P-loop containing nucleoside triphosphate hydrolaseunknownSSF52540P-loop containing nucleoside triphosphate hydrolasescoord: 54..258
score: 1.31
NoneNo IPR availablePANTHERPTHR10344THYMIDYLATE KINASEcoord: 53..267
score: 9.2
NoneNo IPR availablePFAMPF02223Thymidylate_kincoord: 60..245
score: 2.1

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Lsi07G004340Csa4G006250Cucumber (Chinese Long) v2culsiB312
Lsi07G004340CSPI04G01810Wild cucumber (PI 183967)cpilsiB311
Lsi07G004340Cucsa.096180Cucumber (Gy14) v1cgylsiB113
Lsi07G004340CmaCh01G001680Cucurbita maxima (Rimu)cmalsiB449
Lsi07G004340CmoCh01G001750Cucurbita moschata (Rifu)cmolsiB436
Lsi07G004340Cla012732Watermelon (97103) v1lsiwmB438
Lsi07G004340MELO3C017855Melon (DHL92) v3.5.1lsimeB447
Lsi07G004340ClCG07G012360Watermelon (Charleston Gray)lsiwcgB406
Lsi07G004340MELO3C017855.2Melon (DHL92) v3.6.1lsimedB465
Lsi07G004340Cla97C07G139150Watermelon (97103) v2lsiwmbB405
Lsi07G004340Bhi01G002787Wax gourdlsiwgoB558
Lsi07G004340Cp4.1LG02g15150Cucurbita pepo (Zucchini)cpelsiB476
Lsi07G004340CsGy4G001730Cucumber (Gy14) v2cgyblsiB285
Lsi07G004340Carg04209Silver-seed gourdcarlsiB183
Lsi07G004340CsaV3_4G001780Cucumber (Chinese Long) v3cuclsiB331
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi07G004340Cucumber (Gy14) v2cgyblsiB502
Lsi07G004340Melon (DHL92) v3.6.1lsimedB451
Lsi07G004340Silver-seed gourdcarlsiB109
Lsi07G004340Silver-seed gourdcarlsiB182
Lsi07G004340Cucumber (Chinese Long) v3cuclsiB150
Lsi07G004340Cucumber (Chinese Long) v3cuclsiB568
Lsi07G004340Watermelon (97103) v2lsiwmbB420
Lsi07G004340Bottle gourd (USVL1VR-Ls)lsilsiB117
Lsi07G004340Cucumber (Gy14) v1cgylsiB136
Lsi07G004340Cucurbita maxima (Rimu)cmalsiB256
Lsi07G004340Cucurbita maxima (Rimu)cmalsiB450
Lsi07G004340Cucurbita maxima (Rimu)cmalsiB736
Lsi07G004340Cucurbita moschata (Rifu)cmolsiB174
Lsi07G004340Cucurbita moschata (Rifu)cmolsiB244
Lsi07G004340Cucurbita moschata (Rifu)cmolsiB437
Lsi07G004340Cucurbita moschata (Rifu)cmolsiB727
Lsi07G004340Cucurbita pepo (Zucchini)cpelsiB472
Lsi07G004340Cucurbita pepo (Zucchini)cpelsiB515
Lsi07G004340Cucurbita pepo (Zucchini)cpelsiB516
Lsi07G004340Wild cucumber (PI 183967)cpilsiB137
Lsi07G004340Wild cucumber (PI 183967)cpilsiB546
Lsi07G004340Cucumber (Chinese Long) v2culsiB138
Lsi07G004340Melon (DHL92) v3.5.1lsimeB430
Lsi07G004340Watermelon (Charleston Gray)lsiwcgB387
Lsi07G004340Watermelon (Charleston Gray)lsiwcgB392