Lsi07G004280 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi07G004280
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Sterile alpha motif (SAM) domain-containing protein
Location	chr07 : 4587124 .. 4587693 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTGGTTCTCATGGCTTTCAAAAACAACTCTCCATCCTTCTTTGGTCTACGAATACGGGCTTGCCCTAGCTCAAAACGAGCTCGAACACGAAGATATTCTCTATTTCAACCACGAATTTCTCCAGAGCATCGGAATCTCCATTGCCAAGCATCGCCTCGAGATCCTCAAGCTTGCTCGTAAAGACAACGCCCTCCATCCTCGTCCCATCACTCGCCTTCTCCTCGCTCTCAAGAAAACCAAGCGCCGATTCGCGAATCTCATCCGCAATTTCACTCATCACGATCAATTATTAGACGATTCTAAAGCCCTAGTTCTCGTTCCCAAATCAACCTACGCCGCTAAATTCCTCAAGAGGAACAAGACATTCTCCGTCGGGAAACAGCAGGGGAGGTTTCTACTGACTAATGGAAGTCCGGATCCCGGTCTGATCTGGCCGCGAATTCACACTTTTTCCGGTCCGATTCTGTACGATCTGCCGGCCGAGGAGAAGAAGGAGAAGCAGAAGGAGGATGGAGTTGAGGAAATCAGGTGGGATACAATGTTTCAGGATTTGAAACCTACTTGA

mRNA sequence

ATGGATTGGTTCTCATGGCTTTCAAAAACAACTCTCCATCCTTCTTTGGTCTACGAATACGGGCTTGCCCTAGCTCAAAACGAGCTCGAACACGAAGATATTCTCTATTTCAACCACGAATTTCTCCAGAGCATCGGAATCTCCATTGCCAAGCATCGCCTCGAGATCCTCAAGCTTGCTCGTAAAGACAACGCCCTCCATCCTCGTCCCATCACTCGCCTTCTCCTCGCTCTCAAGAAAACCAAGCGCCGATTCGCGAATCTCATCCGCAATTTCACTCATCACGATCAATTATTAGACGATTCTAAAGCCCTAGTTCTCGTTCCCAAATCAACCTACGCCGCTAAATTCCTCAAGAGGAACAAGACATTCTCCGTCGGGAAACAGCAGGGGAGGTTTCTACTGACTAATGGAAGTCCGGATCCCGGTCTGATCTGGCCGCGAATTCACACTTTTTCCGGTCCGATTCTGTACGATCTGCCGGCCGAGGAGAAGAAGGAGAAGCAGAAGGAGGATGGAGTTGAGGAAATCAGGTGGGATACAATGTTTCAGGATTTGAAACCTACTTGA

Coding sequence (CDS)

ATGGATTGGTTCTCATGGCTTTCAAAAACAACTCTCCATCCTTCTTTGGTCTACGAATACGGGCTTGCCCTAGCTCAAAACGAGCTCGAACACGAAGATATTCTCTATTTCAACCACGAATTTCTCCAGAGCATCGGAATCTCCATTGCCAAGCATCGCCTCGAGATCCTCAAGCTTGCTCGTAAAGACAACGCCCTCCATCCTCGTCCCATCACTCGCCTTCTCCTCGCTCTCAAGAAAACCAAGCGCCGATTCGCGAATCTCATCCGCAATTTCACTCATCACGATCAATTATTAGACGATTCTAAAGCCCTAGTTCTCGTTCCCAAATCAACCTACGCCGCTAAATTCCTCAAGAGGAACAAGACATTCTCCGTCGGGAAACAGCAGGGGAGGTTTCTACTGACTAATGGAAGTCCGGATCCCGGTCTGATCTGGCCGCGAATTCACACTTTTTCCGGTCCGATTCTGTACGATCTGCCGGCCGAGGAGAAGAAGGAGAAGCAGAAGGAGGATGGAGTTGAGGAAATCAGGTGGGATACAATGTTTCAGGATTTGAAACCTACTTGA

Protein sequence

MDWFSWLSKTTLHPSLVYEYGLALAQNELEHEDILYFNHEFLQSIGISIAKHRLEILKLARKDNALHPRPITRLLLALKKTKRRFANLIRNFTHHDQLLDDSKALVLVPKSTYAAKFLKRNKTFSVGKQQGRFLLTNGSPDPGLIWPRIHTFSGPILYDLPAEEKKEKQKEDGVEEIRWDTMFQDLKPT

Homology

[Close]

BLAST of Lsi07G004280 vs. TrEMBL
Match: A0A0A0KVK9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G006310 PE=4 SV=1)

HSP 1 Score: 310.8 bits (795), Expect = 1.1e-81
Identity = 156/191 (81.68%), Postives = 171/191 (89.53%), Query Frame = 1


Query: 1   MDWFSWLSKTTLHPSLVYEYGLALAQNELEHEDILYFNHEFLQSIGISIAKHRLEILKLA 60
           MDWFSWLS+T+LHPSLVYEYGLALA NELEHEDILYFNHEFLQSIGISIAKHRLEILKL 
Sbjct: 10  MDWFSWLSRTSLHPSLVYEYGLALANNELEHEDILYFNHEFLQSIGISIAKHRLEILKLV 69

Query: 61  RKDNALHPRPITRLLLALKKTKRRFANLIRNFTHHDQLLDDSKALVLVPKSTYAAKFLKR 120
            K+NALHPRPITR+LLALKKTKRRFANLIRNFTHHD  L++SKALVLVPKS+YAAK LKR
Sbjct: 70  HKENALHPRPITRILLALKKTKRRFANLIRNFTHHDDQLEESKALVLVPKSSYAAKILKR 129

Query: 121 NKTFSVGKQQGRFLLTNGSPDPGL-IWPRIHTFSGPILYDL-PAEEKKEKQKEDGVEEIR 180
           NKTFSVGK QGRFLLTNGSPDP + I  RI  FSGPILYD   A   +E++K++GVEEIR
Sbjct: 130 NKTFSVGKTQGRFLLTNGSPDPDVKIGRRIQHFSGPILYDARSAAAAEEEKKKEGVEEIR 189

Query: 181 WDTMFQDLKPT 190
           WD MFQ+L+PT
Sbjct: 190 WDAMFQNLRPT 200

[Close]

BLAST of Lsi07G004280 vs. TrEMBL
Match: W9RBY4_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_025708 PE=4 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 1.7e-53
Identity = 126/205 (61.46%), Postives = 142/205 (69.27%), Query Frame = 1


Query: 1   MDWFSWLSKTTLHPSLVYEYGLALAQNELEHEDILYFNHEFLQSIGISIAKHRLEILKLA 60
           MDWFSWLSKT L PSLVYEYGLA A NELE EDI+YFNHEFLQS+GISIAKHRLEILKLA
Sbjct: 1   MDWFSWLSKTGLEPSLVYEYGLAFAHNELEEEDIIYFNHEFLQSMGISIAKHRLEILKLA 60

Query: 61  RKD---NALHPRPITRLLLALKKTKRRFANLIRNFTHHDQLLDDSKALVLVPK-STYAAK 120
           RK+   +   PRP+ RLL+A+K+TKR  A  IR     DQ   DS ALV+V + S Y  +
Sbjct: 61  RKEKGSSGRGPRPMARLLVAIKRTKRCLAKYIRTLVRRDQ---DSSALVVVQRPSGYGNR 120

Query: 121 F----LKRNKTFSVGKQQGRFLLTNGSPDPGLIWPRIHTFSGPILYDLPAEEKKEKQKED 180
           F    LKRN+   V  QQGR LLTNGSP      PRI +FS P+++DL  EEK E    D
Sbjct: 121 FRGAMLKRNRKMVV-PQQGRLLLTNGSPMVVSGGPRIESFSSPVVFDLRKEEKMEHDHHD 180

Query: 181 --------GVEEIRWDTMFQDLKPT 190
                   GVEEIRWDTMFQDLKPT
Sbjct: 181 QEDGYWSTGVEEIRWDTMFQDLKPT 201

[Close]

BLAST of Lsi07G004280 vs. TrEMBL
Match: A0A067LFF3_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06086 PE=4 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 2.8e-53
Identity = 120/199 (60.30%), Postives = 144/199 (72.36%), Query Frame = 1


Query: 1   MDWFSWLSKTTLHPSLVYEYGLALAQNELEHEDILYFNHEFLQSIGISIAKHRLEILKLA 60
           MDWFSWLSKT L PSLVYEYGLA + NELE EDI YFNHEFLQS+GISIAKHRLEILKLA
Sbjct: 1   MDWFSWLSKTGLEPSLVYEYGLAFSHNELEEEDIAYFNHEFLQSMGISIAKHRLEILKLA 60

Query: 61  RKDNALHPRPITRLLLALKKTKRRFANLIRNFTHHDQLLDDSKALVLVPK-STYAAKF-- 120
           RK+    P P+ R+L+A+K+TK R A  IR   H D+      ALV+VP+ + YA ++  
Sbjct: 61  RKEKGATPHPMARVLVAIKRTKMRLAKYIRALAHRDE-----SALVVVPRPAGYATRWRG 120

Query: 121 --LKRNKTFSVGKQQGRFLLTNGSPDPGLIWPRIHTFSGPILYDLPAEEKKEKQKED--- 180
             LKRNK   +GK QGR LLTNGSP   +  PR+ +FS P++YDL  EEK ++  +D   
Sbjct: 121 AMLKRNKKLMMGK-QGRLLLTNGSP-MVVSGPRLDSFSSPVVYDLHKEEKIDEGDDDGYW 180

Query: 181 --GVEEIRWDTMFQDLKPT 190
             GVEEIRWDTMFQ+LKPT
Sbjct: 181 STGVEEIRWDTMFQNLKPT 192

[Close]

BLAST of Lsi07G004280 vs. TrEMBL
Match: M5WU23_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011716mg PE=4 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 1.2e-51
Identity = 118/203 (58.13%), Postives = 140/203 (68.97%), Query Frame = 1


Query: 1   MDWFSWLSKTTLHPSLVYEYGLALAQNELEHEDILYFNHEFLQSIGISIAKHRLEILKLA 60
           MDWFSWLSKT L PSLVYEYGLA A NELE EDI+YFNHEFLQS+GISIAKHRLEILKLA
Sbjct: 1   MDWFSWLSKTGLEPSLVYEYGLAFAHNELEEEDIVYFNHEFLQSMGISIAKHRLEILKLA 60

Query: 61  RKDNALHPRPITRLLLALKKTKRRFANLIRNFTHHDQLLDDSKALVLVPK-STYAAKF-- 120
           RK+    PRPI +LL+A+K+TKR  A  +R +   +Q   D+ AL LV + S Y ++F  
Sbjct: 61  RKEKGTSPRPIRKLLVAIKRTKRCLAEYVRTWIRREQ---DASALALVTRPSNYRSRFRG 120

Query: 121 --LKRNKTFSVGKQQG-RFLLTNGSPDPGLIWPRIHTFSGPILYDLPAEEKKEKQKE--- 180
             LKRNK   +   QG R LLTNGSP   +  P + +FS P++YDL  E K +   +   
Sbjct: 121 AMLKRNKKIIIANNQGSRLLLTNGSP-VVVSGPHVDSFSSPVVYDLQKEGKMDGDDQYND 180

Query: 181 -----DGVEEIRWDTMFQDLKPT 190
                 GVEEIRWDTMFQDLKPT
Sbjct: 181 DGYWSTGVEEIRWDTMFQDLKPT 199

[Close]

BLAST of Lsi07G004280 vs. TrEMBL
Match: A5AIV8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_014064 PE=4 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 5.0e-50
Identity = 117/203 (57.64%), Postives = 141/203 (69.46%), Query Frame = 1


Query: 1   MDWFSWLSKTTLHPSLVYEYGLALAQNELEHEDILYFNHEFLQSIGISIAKHRLEILKLA 60
           MDWFSWLSKT L PSLVYEY LA +QNELE EDI YFNHEFLQS+GISIAKHRLEILKLA
Sbjct: 1   MDWFSWLSKTGLEPSLVYEYALAFSQNELEEEDISYFNHEFLQSMGISIAKHRLEILKLA 60

Query: 61  RKDNALHPRPITRLLLALKKTKRRFANLIRNFTHHDQLLDDSKALVLVPKSTYAAKF--- 120
           RK+    PR ++RL++A+K+TKR  A  IR + H      +  ALV+VP+  Y +++   
Sbjct: 61  RKEKGASPRAMSRLIIAIKRTKRCLAKYIRTWVHR-----EDSALVVVPRPGYGSRWRGA 120

Query: 121 -LKRNKTFSVGKQQGRFLLTNGSPDPGLIWPRIHTFSGPILYDLPAEEKKEKQ-----KE 180
            LKRNK   V   QGR +LTNGSP   +   RI +FS P +Y+LP+EEK E        +
Sbjct: 121 MLKRNKRM-VMATQGRLMLTNGSPKV-VSKRRIDSFSSPAVYNLPSEEKIEGNGDGDGVD 180

Query: 181 DG-----VEEIRWDTMFQDLKPT 190
           DG     VEEIRWDTMFQD+KPT
Sbjct: 181 DGYWSTVVEEIRWDTMFQDMKPT 196

[Close]

BLAST of Lsi07G004280 vs. TAIR10
Match: AT1G15760.1 (AT1G15760.1 Sterile alpha motif (SAM) domain-containing protein)

HSP 1 Score: 178.3 bits (451), Expect = 4.3e-45
Identity = 99/204 (48.53%), Postives = 138/204 (67.65%), Query Frame = 1


Query: 3   WFSWLSKTTLHPSLVYEYGLALAQNELEHEDILYFNHEFLQSIGISIAKHRLEILKLARK 62
           WFSWLS+T L PSL++EYGL+ +QNELEHEDI YF+HEFLQS+GISIAKHRLEILKLAR+
Sbjct: 5   WFSWLSRTNLEPSLIHEYGLSFSQNELEHEDISYFDHEFLQSMGISIAKHRLEILKLARR 64

Query: 63  DNALHP----RPITRLLLALKKTKRRFANLIRNFTHHDQLLDDSKALVLVPKST------ 122
           D    P    R I+R++ A+KKT++  ++ +R +   ++    S+ALVLVPK T      
Sbjct: 65  DRKNSPPLTSRSISRVVTAIKKTRKCLSDHVRAWIRREEESASSRALVLVPKKTSNGIGK 124

Query: 123 YAAKFLKRNKTFSVG-------KQQGRFLLTNGSPDPGLIWPRIHTFSGPILYDLPAEEK 182
           +   FLKRNK   +        ++Q R LLTNG+P       RI +FS P+++D   +++
Sbjct: 125 WRGGFLKRNKRSVMPSNGNGGLEKQERLLLTNGTP------CRIDSFSSPMVFDYSFKDE 184

Query: 183 KEKQKEDGVEEIRWDTMFQDLKPT 190
           K   ++   E+I+WD+MFQ+LKPT
Sbjct: 185 KLYAQDTYFEDIKWDSMFQNLKPT 202

[Close]

BLAST of Lsi07G004280 vs. TAIR10
Match: AT1G80520.1 (AT1G80520.1 Sterile alpha motif (SAM) domain-containing protein)

HSP 1 Score: 160.2 bits (404), Expect = 1.2e-39
Identity = 93/201 (46.27%), Postives = 131/201 (65.17%), Query Frame = 1


Query: 1   MDWFSWLSKTTLHPSLVYEYGLALAQNELEHEDILYFNHEFLQSIGISIAKHRLEILKLA 60
           MDWFSWLS+T L  SL+YEYGL+ + NELE+EDI YFNHEFLQS+GISIAKHRLEILKLA
Sbjct: 1   MDWFSWLSRTNLEASLIYEYGLSFSNNELEYEDIAYFNHEFLQSMGISIAKHRLEILKLA 60

Query: 61  RKDNALHP---RPITRLLLALKKTKRRFANLIRNFTHHDQLLDDSKALVLVPKSTYAA-- 120
           R+D    P   R I R+L+A+KKT + F+  +R +   +   + S+ALV+V +ST ++  
Sbjct: 61  RRDRKPSPLTARSIFRVLIAIKKTGKCFSEHVRAWIRRE---ESSRALVVVSRSTSSSGN 120

Query: 121 ---KFLKRNK----TFSVGKQQGRFLLTNGSPDPGLIWPRIHTFSGPILYDLPAEEKKEK 180
              K  ++ +    +   G ++ R LLTNG+P       R+ +FS P +     ++    
Sbjct: 121 GRWKSARKKRLVMPSNGNGVKEERLLLTNGTP------CRLDSFSNPKVSSGYEDDDNHW 180

Query: 181 QKEDGVEEIRWDTMFQDLKPT 190
             +D  E+I+WD+MFQ+LKPT
Sbjct: 181 GNKDVEEKIKWDSMFQNLKPT 192

[Close]

BLAST of Lsi07G004280 vs. TAIR10
Match: AT2G12462.1 (AT2G12462.1 BEST Arabidopsis thaliana protein match is: Sterile alpha motif (SAM) domain-containing protein (TAIR:AT1G15760.1))

HSP 1 Score: 91.3 bits (225), Expect = 7.0e-19
Identity = 44/88 (50.00%), Postives = 65/88 (73.86%), Query Frame = 1


Query: 1  MDWFSWLSKTTLHPSLVYEYGLALAQNELEHEDILYFNHEFLQSIGISIAKHRLEILKLA 60
          MDWFSWLSKT L P+L YEYGL  AQ +L+ EDI  FNH FL+ +G+++ KHR+EILKL+
Sbjct: 1  MDWFSWLSKTDLDPTLSYEYGLIFAQKKLQGEDIALFNHNFLRRLGVTVTKHRVEILKLS 60

Query: 61 RKD----NALHPRPITRLLLA--LKKTK 83
          +++    ++ + RP++  L++  +K TK
Sbjct: 61 KRETQALSSYNHRPVSAKLISVVIKATK 88

[Close]

BLAST of Lsi07G004280 vs. NCBI nr
Match: gi|449468954|ref|XP_004152186.1| (PREDICTED: uncharacterized protein LOC101211300 [Cucumis sativus])

HSP 1 Score: 310.8 bits (795), Expect = 1.6e-81
Identity = 156/191 (81.68%), Postives = 171/191 (89.53%), Query Frame = 1


Query: 1   MDWFSWLSKTTLHPSLVYEYGLALAQNELEHEDILYFNHEFLQSIGISIAKHRLEILKLA 60
           MDWFSWLS+T+LHPSLVYEYGLALA NELEHEDILYFNHEFLQSIGISIAKHRLEILKL 
Sbjct: 10  MDWFSWLSRTSLHPSLVYEYGLALANNELEHEDILYFNHEFLQSIGISIAKHRLEILKLV 69

Query: 61  RKDNALHPRPITRLLLALKKTKRRFANLIRNFTHHDQLLDDSKALVLVPKSTYAAKFLKR 120
            K+NALHPRPITR+LLALKKTKRRFANLIRNFTHHD  L++SKALVLVPKS+YAAK LKR
Sbjct: 70  HKENALHPRPITRILLALKKTKRRFANLIRNFTHHDDQLEESKALVLVPKSSYAAKILKR 129

Query: 121 NKTFSVGKQQGRFLLTNGSPDPGL-IWPRIHTFSGPILYDL-PAEEKKEKQKEDGVEEIR 180
           NKTFSVGK QGRFLLTNGSPDP + I  RI  FSGPILYD   A   +E++K++GVEEIR
Sbjct: 130 NKTFSVGKTQGRFLLTNGSPDPDVKIGRRIQHFSGPILYDARSAAAAEEEKKKEGVEEIR 189

Query: 181 WDTMFQDLKPT 190
           WD MFQ+L+PT
Sbjct: 190 WDAMFQNLRPT 200

[Close]

BLAST of Lsi07G004280 vs. NCBI nr
Match: gi|659108431|ref|XP_008454194.1| (PREDICTED: uncharacterized protein LOC103494673 [Cucumis melo])

HSP 1 Score: 308.9 bits (790), Expect = 6.0e-81
Identity = 156/191 (81.68%), Postives = 172/191 (90.05%), Query Frame = 1


Query: 1   MDWFSWLSKTTLHPSLVYEYGLALAQNELEHEDILYFNHEFLQSIGISIAKHRLEILKLA 60
           MDWFSWLSKT+LHPSLVYEYGLALA NELE+EDILYFNHEFLQSIGISIAKHRLEILKL 
Sbjct: 10  MDWFSWLSKTSLHPSLVYEYGLALANNELEYEDILYFNHEFLQSIGISIAKHRLEILKLV 69

Query: 61  RKDNALHPRPITRLLLALKKTKRRFANLIRNFTHHDQLLDDSKALVLVPKSTYAAKFLKR 120
           RK+NALHPRPITR+LLALKKTKRRFANLIRNFTHHD  L++SKALVLVPKS+YAAK LKR
Sbjct: 70  RKENALHPRPITRILLALKKTKRRFANLIRNFTHHDDQLEESKALVLVPKSSYAAKILKR 129

Query: 121 NKTFSVGKQQGRFLLTNGSPDPGL-IWPRIHTFSGPILYDL-PAEEKKEKQKEDGVEEIR 180
           NKTFSVGK QGRFLLTNGSPD  + I  RI  FSGPILYD+  +   +E++K++GVEEIR
Sbjct: 130 NKTFSVGKTQGRFLLTNGSPDHDVNIGRRIQHFSGPILYDVRSSAAAEEEKKKEGVEEIR 189

Query: 181 WDTMFQDLKPT 190
           WD MFQ+LKPT
Sbjct: 190 WDAMFQNLKPT 200

[Close]

BLAST of Lsi07G004280 vs. NCBI nr
Match: gi|1009112918|ref|XP_015870764.1| (PREDICTED: uncharacterized protein LOC107407934 [Ziziphus jujuba])

HSP 1 Score: 229.6 bits (584), Expect = 4.7e-57
Identity = 122/198 (61.62%), Postives = 142/198 (71.72%), Query Frame = 1


Query: 1   MDWFSWLSKTTLHPSLVYEYGLALAQNELEHEDILYFNHEFLQSIGISIAKHRLEILKLA 60
           MDWFSWLS+T L PSLVYEYGLA A NELE EDI+YFNHEFLQS+GISIAKHRLEILKLA
Sbjct: 1   MDWFSWLSRTGLEPSLVYEYGLAFAHNELEEEDIIYFNHEFLQSMGISIAKHRLEILKLA 60

Query: 61  RKDNALHPRPITRLLLALKKTKRRFANLIRNFTHHDQLLDDSKALVLVPKSTYAAKF--- 120
           RK+    PRPITRLL+ALKKTKR  A  +    H ++      ALV+VP+ +Y  +F   
Sbjct: 61  RKEKGTGPRPITRLLVALKKTKRSLAKYVHTLIHREE-----SALVVVPRPSYGTRFRGA 120

Query: 121 -LKRNKTFSVGKQQGRFLLTNGSPDPGLIWPRIHTFSGPILYDLPAEEKKEKQKE----- 180
            LKRNK   +  Q  R LLTNGSP   +  PR+ +FS P++YDLP EEK E+  +     
Sbjct: 121 MLKRNKKLMMANQGNRLLLTNGSP-VVVSGPRLESFSSPLVYDLPKEEKVEEGDDGGYWS 180

Query: 181 DGVEEIRWDTMFQDLKPT 190
            GVEEIRWDTMFQDLKPT
Sbjct: 181 TGVEEIRWDTMFQDLKPT 192

[Close]

BLAST of Lsi07G004280 vs. NCBI nr
Match: gi|703101348|ref|XP_010097163.1| (hypothetical protein L484_025708 [Morus notabilis])

HSP 1 Score: 217.2 bits (552), Expect = 2.4e-53
Identity = 126/205 (61.46%), Postives = 142/205 (69.27%), Query Frame = 1


Query: 1   MDWFSWLSKTTLHPSLVYEYGLALAQNELEHEDILYFNHEFLQSIGISIAKHRLEILKLA 60
           MDWFSWLSKT L PSLVYEYGLA A NELE EDI+YFNHEFLQS+GISIAKHRLEILKLA
Sbjct: 1   MDWFSWLSKTGLEPSLVYEYGLAFAHNELEEEDIIYFNHEFLQSMGISIAKHRLEILKLA 60

Query: 61  RKD---NALHPRPITRLLLALKKTKRRFANLIRNFTHHDQLLDDSKALVLVPK-STYAAK 120
           RK+   +   PRP+ RLL+A+K+TKR  A  IR     DQ   DS ALV+V + S Y  +
Sbjct: 61  RKEKGSSGRGPRPMARLLVAIKRTKRCLAKYIRTLVRRDQ---DSSALVVVQRPSGYGNR 120

Query: 121 F----LKRNKTFSVGKQQGRFLLTNGSPDPGLIWPRIHTFSGPILYDLPAEEKKEKQKED 180
           F    LKRN+   V  QQGR LLTNGSP      PRI +FS P+++DL  EEK E    D
Sbjct: 121 FRGAMLKRNRKMVV-PQQGRLLLTNGSPMVVSGGPRIESFSSPVVFDLRKEEKMEHDHHD 180

Query: 181 --------GVEEIRWDTMFQDLKPT 190
                   GVEEIRWDTMFQDLKPT
Sbjct: 181 QEDGYWSTGVEEIRWDTMFQDLKPT 201

[Close]

BLAST of Lsi07G004280 vs. NCBI nr
Match: gi|802540225|ref|XP_012075284.1| (PREDICTED: uncharacterized protein LOC105636580 [Jatropha curcas])

HSP 1 Score: 216.5 bits (550), Expect = 4.1e-53
Identity = 120/199 (60.30%), Postives = 144/199 (72.36%), Query Frame = 1


Query: 1   MDWFSWLSKTTLHPSLVYEYGLALAQNELEHEDILYFNHEFLQSIGISIAKHRLEILKLA 60
           MDWFSWLSKT L PSLVYEYGLA + NELE EDI YFNHEFLQS+GISIAKHRLEILKLA
Sbjct: 1   MDWFSWLSKTGLEPSLVYEYGLAFSHNELEEEDIAYFNHEFLQSMGISIAKHRLEILKLA 60

Query: 61  RKDNALHPRPITRLLLALKKTKRRFANLIRNFTHHDQLLDDSKALVLVPK-STYAAKF-- 120
           RK+    P P+ R+L+A+K+TK R A  IR   H D+      ALV+VP+ + YA ++  
Sbjct: 61  RKEKGATPHPMARVLVAIKRTKMRLAKYIRALAHRDE-----SALVVVPRPAGYATRWRG 120

Query: 121 --LKRNKTFSVGKQQGRFLLTNGSPDPGLIWPRIHTFSGPILYDLPAEEKKEKQKED--- 180
             LKRNK   +GK QGR LLTNGSP   +  PR+ +FS P++YDL  EEK ++  +D   
Sbjct: 121 AMLKRNKKLMMGK-QGRLLLTNGSP-MVVSGPRLDSFSSPVVYDLHKEEKIDEGDDDGYW 180

Query: 181 --GVEEIRWDTMFQDLKPT 190
             GVEEIRWDTMFQ+LKPT
Sbjct: 181 STGVEEIRWDTMFQNLKPT 192

The following BLAST results are available for this feature:

BLAST of Lsi07G004280 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Lsi07G004280 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KVK9_CUCSA	1.1e-81	81.68	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G006310 PE=4 SV=1	[more]
W9RBY4_9ROSA	1.7e-53	61.46	Uncharacterized protein OS=Morus notabilis GN=L484_025708 PE=4 SV=1	[more]
A0A067LFF3_JATCU	2.8e-53	60.30	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06086 PE=4 SV=1	[more]
M5WU23_PRUPE	1.2e-51	58.13	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011716mg PE=4 SV=1	[more]
A5AIV8_VITVI	5.0e-50	57.64	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_014064 PE=4 SV=1	[more]

BLAST of Lsi07G004280 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G15760.1	4.3e-45	48.53	Sterile alpha motif (SAM) domain-containing protein	[more]
AT1G80520.1	1.2e-39	46.27	Sterile alpha motif (SAM) domain-containing protein	[more]
AT2G12462.1	7.0e-19	50.00	BEST Arabidopsis thaliana protein match is: Sterile alpha motif (SAM...	[more]

BLAST of Lsi07G004280 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449468954\|ref\|XP_004152186.1\|	1.6e-81	81.68	PREDICTED: uncharacterized protein LOC101211300 [Cucumis sativus]	[more]
gi\|659108431\|ref\|XP_008454194.1\|	6.0e-81	81.68	PREDICTED: uncharacterized protein LOC103494673 [Cucumis melo]	[more]
gi\|1009112918\|ref\|XP_015870764.1\|	4.7e-57	61.62	PREDICTED: uncharacterized protein LOC107407934 [Ziziphus jujuba]	[more]
gi\|703101348\|ref\|XP_010097163.1\|	2.4e-53	61.46	hypothetical protein L484_025708 [Morus notabilis]	[more]
gi\|802540225\|ref\|XP_012075284.1\|	4.1e-53	60.30	PREDICTED: uncharacterized protein LOC105636580 [Jatropha curcas]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR013761	SAM/pointed_sf

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi07G004280.1	Lsi07G004280.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013761	Sterile alpha motif/pointed domain	GENE3D	G3DSA:1.10.150.50		coord: 20..61 score: 6.
IPR013761	Sterile alpha motif/pointed domain	unknown	SSF47769	SAM/Pointed domain	coord: 19..62 score: 2.
None	No IPR available	PANTHER	PTHR33915	FAMILY NOT NAMED	coord: 1..189 score: 1.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi07G004280	Csa4G006310	Cucumber (Chinese Long) v2	culsiB312
Lsi07G004280	CSPI04G01870	Wild cucumber (PI 183967)	cpilsiB311
Lsi07G004280	Cucsa.096120	Cucumber (Gy14) v1	cgylsiB113
Lsi07G004280	CmaCh14G013660	Cucurbita maxima (Rimu)	cmalsiB256
Lsi07G004280	CmaCh01G001620	Cucurbita maxima (Rimu)	cmalsiB449
Lsi07G004280	CmoCh01G001710	Cucurbita moschata (Rifu)	cmolsiB436
Lsi07G004280	CmoCh14G014010	Cucurbita moschata (Rifu)	cmolsiB244
Lsi07G004280	Cla012738	Watermelon (97103) v1	lsiwmB438
Lsi07G004280	MELO3C017849	Melon (DHL92) v3.5.1	lsimeB447
Lsi07G004280	ClCG07G012300	Watermelon (Charleston Gray)	lsiwcgB406
Lsi07G004280	MELO3C017849.2	Melon (DHL92) v3.6.1	lsimedB465
Lsi07G004280	Cla97C07G139080	Watermelon (97103) v2	lsiwmbB405
Lsi07G004280	Bhi01G002793	Wax gourd	lsiwgoB558
Lsi07G004280	Cp4.1LG03g13540	Cucurbita pepo (Zucchini)	cpelsiB516
Lsi07G004280	Cp4.1LG02g15100	Cucurbita pepo (Zucchini)	cpelsiB476
Lsi07G004280	CsGy4G001790	Cucumber (Gy14) v2	cgyblsiB285
Lsi07G004280	Carg06521	Silver-seed gourd	carlsiB109
Lsi07G004280	Carg04213	Silver-seed gourd	carlsiB183
Lsi07G004280	CsaV3_4G001840	Cucumber (Chinese Long) v3	cuclsiB331

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi07G004280	Bottle gourd (USVL1VR-Ls)	lsilsiB117
Lsi07G004280	Cucumber (Gy14) v1	cgylsiB136
Lsi07G004280	Cucurbita maxima (Rimu)	cmalsiB450
Lsi07G004280	Cucurbita maxima (Rimu)	cmalsiB736
Lsi07G004280	Cucurbita moschata (Rifu)	cmolsiB174
Lsi07G004280	Cucurbita moschata (Rifu)	cmolsiB437
Lsi07G004280	Cucurbita moschata (Rifu)	cmolsiB727
Lsi07G004280	Cucurbita pepo (Zucchini)	cpelsiB472
Lsi07G004280	Cucurbita pepo (Zucchini)	cpelsiB515
Lsi07G004280	Wild cucumber (PI 183967)	cpilsiB137
Lsi07G004280	Wild cucumber (PI 183967)	cpilsiB546
Lsi07G004280	Cucumber (Chinese Long) v2	culsiB138
Lsi07G004280	Melon (DHL92) v3.5.1	lsimeB430
Lsi07G004280	Watermelon (Charleston Gray)	lsiwcgB387
Lsi07G004280	Watermelon (Charleston Gray)	lsiwcgB392
Lsi07G004280	Cucumber (Gy14) v2	cgyblsiB502
Lsi07G004280	Melon (DHL92) v3.6.1	lsimedB451
Lsi07G004280	Silver-seed gourd	carlsiB182
Lsi07G004280	Cucumber (Chinese Long) v3	cuclsiB150
Lsi07G004280	Cucumber (Chinese Long) v3	cuclsiB568
Lsi07G004280	Watermelon (97103) v2	lsiwmbB420