Lsi07G004150 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi07G004150
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Homoserine O-acetyltransferase
Location	chr07 : 4454170 .. 4456046 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTCTTCACTCCCTCTTCCATTCCCTACCTAAACGAAAAATCTCATCCCGTTCGGGCATGGGTCCCACATGGCCATGAACATCACTAGTGGAAACCAATGTAATGACAATTTTATGAGAATTTTATTTAAAATTTTTCCCATTAATTTTAAATATTTTATTTCTTGTGGAGAAAAAAACAAGAATGGACCAATCAGAACTTTGCGCACGTGGCACGCTGGCGAACAACTACGGGAAGAAGCAAAGATAATTTCGCGGTGGCCGTTAAAAGAAAGGAAGATAATAGAGAAAATGGCAGCGGCGGCGACGGCGACGGGAGTCTTGAAGATCGGCGTTCCGGCTCCGGCCAAACCAGGAAAGCAGCCGACGAGTTTCGCAAGGCTCGCAATTCGCTATCCAAATTGCTTTCTCAATACGCGGCTGAAATTTCCTGTCATTCGAGCACTTGGACAAGGAGGGAATCCGAGCGGCAACGACGACACCGATGCCGGCGATTTCATCAATCAGGTGTGTGTTTTCGCTAATTGTCTTCTATCTCTCAGTATATAAGAACATACGCTTTGCAAATTGCTGTCTCGACCTAGTACTTCTAGGGCTAATTAACTGAGTTTAGGCTGAATGAGGGAGAAATCAATAGAATCCTTTAATTAACCACATTTTAGCATCATTTTGATTGATATCTGGCTAGATTCTAGAAGTTCCTTTGATTGAATTGACGAGGAAATCTTGAATTGAGTAAATTCTTGTTAGGTTGAGTTTGCGTTCCTTATCTTTCCATTATCAAACCTGGAAAAAGCATGGATTTCATGCTCACGATGATTATACAAAGCATTTTCAACTTGATGTTTGTCCAATTCATACAAGTTCCGTTCAAGATTATCATCGTAATTCAATTATTTTGAAATGATTTTGATTCATAGTTATGGGGTAAGATATAAAACTAATGTTTCCAGCTCTTATTTTGTGGAGTTACCTTCTGCTTTAATCCAAACAATTCGAACAAAATCAAATCAAACCAATGCCTTCCTATCCTGTCACGGTTGCAAACCATTTAGCATCTTGTGATAGATTTGCTTTCAAGGCAATGATTCTTTCACGGCACAACAAATCTTTTTGAAATTTGATTGAAAAGGTAGCCTACTGTTTGGTTAAATTATATTTATAGTTTTCAATGTGTAATGGCATCTTTGATAGTTTGATTGAGTTGTTAGTAGTAATTTGTTTCTTCACAAGTATATGGTTTGTTAGGTACTGAAACCATGTAATAATATTATCTCATTCCACAGGTAAGATGTCGAGCCATTTTTTACATGTCGTTAACACGAGCAAAAATAAGATTTAAATGTTGTTTATCTCCCCTACCCTTTTTTTCTAATGGTTTAAAAATGTGTTTTTACGTGTACAAAGTGTTTTAAGCACTTCAAATGTCATTTCAAGCAGGTCCTGAATATAACGAATGAAATGATAATGTAATATGCAGGAGGATGTTCAATTTTTGTTGAAATTGGCGGCAGGTTCCATAGCAGGGGGATGTGGAATAAAGTATGGAAGCATAATATTTCCAGAGATAACCAAACCCAACATCGTACAAGCTCTTATCATGATATCAGCTCCTGTGTTTGTAGCCATATGGCTTTTGATCAAGCAAAGTCGTGAAGAGAGACAAAGCTAACAATCTACTACTTTCATTTTTACAAAATGAATTGATTTTAACCATCCAAAAGCCCTTTTTTTTTCTTTGTAATATATATAGTCCTTGTTAAAAGCACTAGAAATTGAATACAGATGAAGCACTTCTTTACAGTTTTGCTATCATGCTTGCTGGATCATCTTCATTGTAAAAGTTAATACTAAGAATAGAAATCATGCTCTTCGATC

mRNA sequence

CTTCTTCACTCCCTCTTCCATTCCCTACCTAAACGAAAAATCTCATCCCGTTCGGGCATGGGTCCCACATGGCCATGAACATCACTAGTGGAAACCAATGTAATGACAATTTTATGAGAATTTTATTTAAAATTTTTCCCATTAATTTTAAATATTTTATTTCTTGTGGAGAAAAAAACAAGAATGGACCAATCAGAACTTTGCGCACGTGGCACGCTGGCGAACAACTACGGGAAGAAGCAAAGATAATTTCGCGGTGGCCGTTAAAAGAAAGGAAGATAATAGAGAAAATGGCAGCGGCGGCGACGGCGACGGGAGTCTTGAAGATCGGCGTTCCGGCTCCGGCCAAACCAGGAAAGCAGCCGACGAGTTTCGCAAGGCTCGCAATTCGCTATCCAAATTGCTTTCTCAATACGCGGCTGAAATTTCCTGTCATTCGAGCACTTGGACAAGGAGGGAATCCGAGCGGCAACGACGACACCGATGCCGGCGATTTCATCAATCAGGAGGATGTTCAATTTTTGTTGAAATTGGCGGCAGGTTCCATAGCAGGGGGATGTGGAATAAAGTATGGAAGCATAATATTTCCAGAGATAACCAAACCCAACATCGTACAAGCTCTTATCATGATATCAGCTCCTGTGTTTGTAGCCATATGGCTTTTGATCAAGCAAAGTCGTGAAGAGAGACAAAGCTAACAATCTACTACTTTCATTTTTACAAAATGAATTGATTTTAACCATCCAAAAGCCCTTTTTTTTTCTTTGTAATATATATAGTCCTTGTTAAAAGCACTAGAAATTGAATACAGATGAAGCACTTCTTTACAGTTTTGCTATCATGCTTGCTGGATCATCTTCATTGTAAAAGTTAATACTAAGAATAGAAATCATGCTCTTCGATC

Coding sequence (CDS)

ATGGCCATGAACATCACTAGTGGAAACCAATGTAATGACAATTTTATGAGAATTTTATTTAAAATTTTTCCCATTAATTTTAAATATTTTATTTCTTGTGGAGAAAAAAACAAGAATGGACCAATCAGAACTTTGCGCACGTGGCACGCTGGCGAACAACTACGGGAAGAAGCAAAGATAATTTCGCGGTGGCCGTTAAAAGAAAGGAAGATAATAGAGAAAATGGCAGCGGCGGCGACGGCGACGGGAGTCTTGAAGATCGGCGTTCCGGCTCCGGCCAAACCAGGAAAGCAGCCGACGAGTTTCGCAAGGCTCGCAATTCGCTATCCAAATTGCTTTCTCAATACGCGGCTGAAATTTCCTGTCATTCGAGCACTTGGACAAGGAGGGAATCCGAGCGGCAACGACGACACCGATGCCGGCGATTTCATCAATCAGGAGGATGTTCAATTTTTGTTGAAATTGGCGGCAGGTTCCATAGCAGGGGGATGTGGAATAAAGTATGGAAGCATAATATTTCCAGAGATAACCAAACCCAACATCGTACAAGCTCTTATCATGATATCAGCTCCTGTGTTTGTAGCCATATGGCTTTTGATCAAGCAAAGTCGTGAAGAGAGACAAAGCTAA

Protein sequence

MAMNITSGNQCNDNFMRILFKIFPINFKYFISCGEKNKNGPIRTLRTWHAGEQLREEAKIISRWPLKERKIIEKMAAAATATGVLKIGVPAPAKPGKQPTSFARLAIRYPNCFLNTRLKFPVIRALGQGGNPSGNDDTDAGDFINQEDVQFLLKLAAGSIAGGCGIKYGSIIFPEITKPNIVQALIMISAPVFVAIWLLIKQSREERQS

Homology

[Close]

BLAST of Lsi07G004150 vs. TrEMBL
Match: A0A0A0KWZ3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G006440 PE=4 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 1.7e-54
Identity = 114/145 (78.62%), Postives = 121/145 (83.45%), Query Frame = 1


Query: 75  MAAAATATGVLKIGVPAPA----------KPGKQPTSFARLAIRYPNCFLNTRLKFPVIR 134
           MAA ATATGVLKIGVPAPA          K G+ PT+FA L +RYPN FLNTR+KFP +R
Sbjct: 1   MAATATATGVLKIGVPAPAPAPAPPPLKAKSGRHPTNFASLTMRYPNYFLNTRMKFPAVR 60

Query: 135 ALGQGGNPSGNDDTDAGDFINQEDVQFLLKLAAGSIAGGCGIKYGSIIFPEITKPNIVQA 194
           ALGQGGNPSG+DD DAG FINQEDV+FLLKL AGSIAGG GIKYGSIIFPEITKPNIVQA
Sbjct: 61  ALGQGGNPSGDDDNDAGGFINQEDVEFLLKLGAGSIAGGFGIKYGSIIFPEITKPNIVQA 120

Query: 195 LIMISAPVFVAIWLLIKQSREERQS 210
           LIMIS PV VAIWLLIKQSREE QS
Sbjct: 121 LIMISTPVVVAIWLLIKQSREETQS 145

[Close]

BLAST of Lsi07G004150 vs. TrEMBL
Match: D7U152_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_09s0002g07220 PE=4 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 3.0e-19
Identity = 53/103 (51.46%), Postives = 71/103 (68.93%), Query Frame = 1


Query: 114 LNTRLKFPVIRALG----QGGNP------SGNDDTDAGDFINQEDVQFLLKLAAGSIAGG 173
           LN R+KFP     G    Q  NP      S  ++  +  FI++ED+++L+KL  GS+ G 
Sbjct: 25  LNPRIKFPTTSFRGSSRVQASNPEREEQDSSMNNNISPSFISEEDLKYLVKLGGGSVVGA 84

Query: 174 CGIKYGSIIFPEITKPNIVQALIMISAPVFVAIWLLIKQSREE 207
             IKYGSII PEIT+PNI+QALIM+SAPV VA+WLL+KQSR++
Sbjct: 85  AVIKYGSIILPEITRPNIIQALIMVSAPVVVAVWLLLKQSRQD 127

[Close]

BLAST of Lsi07G004150 vs. TrEMBL
Match: A0A0D2NPM9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G101400 PE=4 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 7.3e-18
Identity = 63/137 (45.99%), Postives = 78/137 (56.93%), Query Frame = 1


Query: 75  MAAAATATGVLKIGVPA-------PAKPGKQPTSFARLAIRYPNCFLNTRLKFPVIRALG 134
           MAA+A ATG  K+   A       PA   K    F   A   P+   + +  FP+     
Sbjct: 1   MAASAMATGTPKLRFSASNHGRLNPASKLKGSVKFLIDANNCPSSATSFQRSFPIRAFDS 60

Query: 135 QGGNPSGNDDTDAGDFINQEDVQFLLKLAAGSIAGGCGIKYGSIIFPEITKPNIVQALIM 194
           Q    +   D     FI QED+ ++LKL  GS+ G   IKYGSI+FPEIT+PNIVQALIM
Sbjct: 61  QTDEETPAFDEPNAAFIPQEDLSYVLKLGGGSMVGAAIIKYGSILFPEITRPNIVQALIM 120

Query: 195 ISAPVFVAIWLLIKQSR 205
           ISAPV +A+ LLIKQSR
Sbjct: 121 ISAPVVIAVLLLIKQSR 137

[Close]

BLAST of Lsi07G004150 vs. TrEMBL
Match: A0A0B0PMR2_GOSAR (Homoserine O-acetyltransferase OS=Gossypium arboreum GN=F383_01527 PE=4 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 9.6e-18
Identity = 62/137 (45.26%), Postives = 77/137 (56.20%), Query Frame = 1


Query: 75  MAAAATATGVLKIGVPA-------PAKPGKQPTSFARLAIRYPNCFLNTRLKFPVIRALG 134
           MA +A ATG  K+   A       PA   K    F   A   P+   + +  FP+     
Sbjct: 1   MATSAMATGTPKLRFSASNHGRLNPASKLKGSVKFLIDANNNPSSTTSFQRSFPIRAVDS 60

Query: 135 QGGNPSGNDDTDAGDFINQEDVQFLLKLAAGSIAGGCGIKYGSIIFPEITKPNIVQALIM 194
           Q    +   D     FI QED+ ++LKL  GS+ G   IKYGSI+FPEIT+PNIVQALIM
Sbjct: 61  QTDEETPAFDESNAAFIPQEDLSYVLKLGGGSMVGAAIIKYGSILFPEITRPNIVQALIM 120

Query: 195 ISAPVFVAIWLLIKQSR 205
           ISAPV +A+ LLIKQSR
Sbjct: 121 ISAPVVIAVLLLIKQSR 137

[Close]

BLAST of Lsi07G004150 vs. TrEMBL
Match: A0A061GFR5_THECC (Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_027260 PE=4 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 1.6e-17
Identity = 65/141 (46.10%), Postives = 86/141 (60.99%), Query Frame = 1


Query: 75  MAAAATATGVLKIGVPAPAK----PGKQPTSFARLAIRYPNCFLNTRLK--FPV--IRAL 134
           MAA+A A+G  K+    P+     P  +    A+  +    C   T  +  FP+  + + 
Sbjct: 1   MAASAVASGSPKLCYSTPSHCPLYPATKLKGTAKFLVDAKFCSSTTSFQRSFPIRAVDSQ 60

Query: 135 GQGGNPSGNDDTDAGDFINQEDVQFLLKLAAGSIAGGCGIKYGSIIFPEITKPNIVQALI 194
            +  NPS  D+ +AG FI QED  +L KL AGS  G   IKYGSI+FPEIT+PNI+QALI
Sbjct: 61  AEEENPS-LDEPNAG-FIPQEDFNYLWKLGAGSAIGAAIIKYGSILFPEITRPNILQALI 120

Query: 195 MISAPVFVAIWLLIKQSREER 208
           MISAPV +A+ LLIKQSR E+
Sbjct: 121 MISAPVIIAVLLLIKQSRLEQ 139

[Close]

BLAST of Lsi07G004150 vs. TAIR10
Match: AT3G15900.1 (AT3G15900.1 unknown protein)

HSP 1 Score: 68.2 bits (165), Expect = 7.0e-12
Identity = 41/121 (33.88%), Postives = 67/121 (55.37%), Query Frame = 1


Query: 85  LKIGVPAPAKPGK-----QPTSFARLA-IRYPNCFLNTRLKFPVIRALGQGGNPSGNDDT 144
           + IGVP  ++        +PT    ++ +++   F N        R+     +   ++  
Sbjct: 10  MAIGVPTLSRSSSVHRSLEPTKKMTMSSVKFVTSFRNPSNCSGTKRSFRVMASDDRSEQA 69

Query: 145 DAGDFINQEDVQFLLKLAAGSIAGGCGIKYGSIIFPEITKPNIVQALIMISAPVFVAIWL 200
           D G  I QED+ +LLK+  GS+AG   IKYGS++FP+IT+PN+  AL +I APV +++ L
Sbjct: 70  DNGQGI-QEDLNYLLKIGVGSVAGAAIIKYGSVLFPQITRPNLTLALFIIIAPVVISVIL 129

[Close]

BLAST of Lsi07G004150 vs. NCBI nr
Match: gi|778689663|ref|XP_004152177.2| (PREDICTED: uncharacterized protein LOC101209077 [Cucumis sativus])

HSP 1 Score: 220.7 bits (561), Expect = 2.4e-54
Identity = 114/145 (78.62%), Postives = 121/145 (83.45%), Query Frame = 1


Query: 75  MAAAATATGVLKIGVPAPA----------KPGKQPTSFARLAIRYPNCFLNTRLKFPVIR 134
           MAA ATATGVLKIGVPAPA          K G+ PT+FA L +RYPN FLNTR+KFP +R
Sbjct: 1   MAATATATGVLKIGVPAPAPAPAPPPLKAKSGRHPTNFASLTMRYPNYFLNTRMKFPAVR 60

Query: 135 ALGQGGNPSGNDDTDAGDFINQEDVQFLLKLAAGSIAGGCGIKYGSIIFPEITKPNIVQA 194
           ALGQGGNPSG+DD DAG FINQEDV+FLLKL AGSIAGG GIKYGSIIFPEITKPNIVQA
Sbjct: 61  ALGQGGNPSGDDDNDAGGFINQEDVEFLLKLGAGSIAGGFGIKYGSIIFPEITKPNIVQA 120

Query: 195 LIMISAPVFVAIWLLIKQSREERQS 210
           LIMIS PV VAIWLLIKQSREE QS
Sbjct: 121 LIMISTPVVVAIWLLIKQSREETQS 145

[Close]

BLAST of Lsi07G004150 vs. NCBI nr
Match: gi|659108397|ref|XP_008454177.1| (PREDICTED: uncharacterized protein LOC103494660 [Cucumis melo])

HSP 1 Score: 217.6 bits (553), Expect = 2.0e-53
Identity = 111/137 (81.02%), Postives = 117/137 (85.40%), Query Frame = 1


Query: 75  MAAAATATGVLKIGVPAP--AKPGKQPTSFARLAIRYPNCFLNTRLKFPVIRALGQGGNP 134
           MAA ATATGVLK G PAP  AK G+  T+FARL +RYPN FLNTR+KFP +RALGQGG P
Sbjct: 1   MAATATATGVLKFGAPAPVKAKSGRHLTNFARLTVRYPNYFLNTRMKFPALRALGQGGKP 60

Query: 135 SGNDDTDAGDFINQEDVQFLLKLAAGSIAGGCGIKYGSIIFPEITKPNIVQALIMISAPV 194
           SGNDD DAG FINQEDV+F LKL AGSIAGG GIKYGSIIFPEITKPNIVQALIMIS PV
Sbjct: 61  SGNDDNDAGGFINQEDVEFFLKLGAGSIAGGFGIKYGSIIFPEITKPNIVQALIMISTPV 120

Query: 195 FVAIWLLIKQSREERQS 210
            VAIWLLIKQSREE QS
Sbjct: 121 VVAIWLLIKQSREETQS 137

[Close]

BLAST of Lsi07G004150 vs. NCBI nr
Match: gi|645245078|ref|XP_008228711.1| (PREDICTED: uncharacterized protein LOC103328098 [Prunus mume])

HSP 1 Score: 109.4 bits (272), Expect = 7.8e-21
Identity = 67/146 (45.89%), Postives = 90/146 (61.64%), Query Frame = 1


Query: 77  AAATATGVLKIGVPAPA-----KPGKQPTSFARLAIRYPNCFLNTRLKFPV-IRALGQGG 136
           A+ATATGV  +   + +     +P K+ T + + AI YPNC  +TR+K  + IRAL    
Sbjct: 6   ASATATGVSSLRYSSGSGHRRIRPAKKVTGYTKFAIHYPNCLSSTRVKGSLPIRALDPQR 65

Query: 137 NPSGNDDTDAGDFIN-------QEDVQFLLKLAAGSIAGGCGIKYGSIIFPEITKPNIVQ 196
              G ++ ++    N       Q+D+++L K+ AGSI     IKYGSI+FPEIT+PNIVQ
Sbjct: 66  R-GGEEEEESSGIANTTSTSNSQDDLEYLGKVVAGSIVAAAVIKYGSIVFPEITRPNIVQ 125

Query: 197 ALIMISAPVFVAIWLLIKQSREERQS 210
           ALIMI  PV VAI LL KQSR E +S
Sbjct: 126 ALIMILTPVIVAILLLFKQSRAEGRS 150

[Close]

BLAST of Lsi07G004150 vs. NCBI nr
Match: gi|657964702|ref|XP_008373985.1| (PREDICTED: uncharacterized protein LOC103437287 [Malus domestica])

HSP 1 Score: 107.5 bits (267), Expect = 3.0e-20
Identity = 63/145 (43.45%), Postives = 91/145 (62.76%), Query Frame = 1


Query: 77  AAATATGVLKIGVPAPA-----KPGKQPTSFARLAIRYPNCFLNTRLK--FPVIRAL--- 136
           A+AT TG   +   + +     +P ++ TS+ + AI YPNC  +TR+K  FP IRAL   
Sbjct: 6   ASATVTGASSLRYSSGSDQRRLRPAQKFTSYTKFAIHYPNCLSSTRVKGYFP-IRALDPQ 65

Query: 137 --GQGGNPSGNDDTDAGDFINQEDVQFLLKLAAGSIAGGCGIKYGSIIFPEITKPNIVQA 196
             G+    + N   +    I+++D+++L K+ AGS+     IKYGS++ PEIT+PNIVQA
Sbjct: 66  RGGEEEEVNSNVGNNGSGLISEDDLEYLGKVVAGSLVAAAVIKYGSVVLPEITRPNIVQA 125

Query: 197 LIMISAPVFVAIWLLIKQSREERQS 210
           LIMI  P+ VA+ LLIKQSR E +S
Sbjct: 126 LIMIFMPIVVAVLLLIKQSRAEGRS 149

[Close]

BLAST of Lsi07G004150 vs. NCBI nr
Match: gi|747088485|ref|XP_011091834.1| (PREDICTED: uncharacterized protein LOC105172173 [Sesamum indicum])

HSP 1 Score: 104.4 bits (259), Expect = 2.5e-19
Identity = 65/145 (44.83%), Postives = 88/145 (60.69%), Query Frame = 1


Query: 66  LKER-KIIEKMAAAATATGVLKIGVPAPAKPGKQPT--SFARLAIRYPNCFLNTRLKFPV 125
           ++ER KII      A     +     + + P +Q    SF R+++R P      R+   +
Sbjct: 23  IQERLKIISMAGRGAALVTQISTNCTSVSSPQRQRLGDSFVRVSLR-PGTTSCQRIS--L 82

Query: 126 IRALGQ---GGNPSGNDDTDAGDFINQEDVQFLLKLAAGSIAGGCGIKYGSIIFPEITKP 185
           +RA  +   GG   G    D G F++QED Q+L KL AGS+AG   IKYGSI+FPEIT+P
Sbjct: 83  VRASPEPQKGGGGDGAAANDEGIFVSQEDWQYLAKLGAGSVAGAAAIKYGSIVFPEITRP 142

Query: 186 NIVQALIMISAPVFVAIWLLIKQSR 205
           N+ QAL+MISAPV VA+WLLIK+SR
Sbjct: 143 NLAQALLMISAPVVVAVWLLIKRSR 164

The following BLAST results are available for this feature:

BLAST of Lsi07G004150 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Lsi07G004150 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KWZ3_CUCSA	1.7e-54	78.62	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G006440 PE=4 SV=1	[more]
D7U152_VITVI	3.0e-19	51.46	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_09s0002g07220 PE=4 SV=...	[more]
A0A0D2NPM9_GOSRA	7.3e-18	45.99	Uncharacterized protein OS=Gossypium raimondii GN=B456_006G101400 PE=4 SV=1	[more]
A0A0B0PMR2_GOSAR	9.6e-18	45.26	Homoserine O-acetyltransferase OS=Gossypium arboreum GN=F383_01527 PE=4 SV=1	[more]
A0A061GFR5_THECC	1.6e-17	46.10	Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_027260 PE=4 SV=1	[more]

BLAST of Lsi07G004150 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G15900.1	7.0e-12	33.88	unknown protein	[more]

BLAST of Lsi07G004150 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778689663\|ref\|XP_004152177.2\|	2.4e-54	78.62	PREDICTED: uncharacterized protein LOC101209077 [Cucumis sativus]	[more]
gi\|659108397\|ref\|XP_008454177.1\|	2.0e-53	81.02	PREDICTED: uncharacterized protein LOC103494660 [Cucumis melo]	[more]
gi\|645245078\|ref\|XP_008228711.1\|	7.8e-21	45.89	PREDICTED: uncharacterized protein LOC103328098 [Prunus mume]	[more]
gi\|657964702\|ref\|XP_008373985.1\|	3.0e-20	43.45	PREDICTED: uncharacterized protein LOC103437287 [Malus domestica]	[more]
gi\|747088485\|ref\|XP_011091834.1\|	2.5e-19	44.83	PREDICTED: uncharacterized protein LOC105172173 [Sesamum indicum]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0008152	metabolic process
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0016740	transferase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi07G004150.1	Lsi07G004150.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR37224	FAMILY NOT NAMED	coord: 66..209 score: 1.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi07G004150	Csa4G006440	Cucumber (Chinese Long) v2	culsiB312
Lsi07G004150	CSPI04G02000	Wild cucumber (PI 183967)	cpilsiB311
Lsi07G004150	Cucsa.096010	Cucumber (Gy14) v1	cgylsiB113
Lsi07G004150	CmaCh14G013770	Cucurbita maxima (Rimu)	cmalsiB256
Lsi07G004150	CmoCh14G014130	Cucurbita moschata (Rifu)	cmolsiB244
Lsi07G004150	Cla012747	Watermelon (97103) v1	lsiwmB438
Lsi07G004150	MELO3C017840	Melon (DHL92) v3.5.1	lsimeB447
Lsi07G004150	ClCG07G012200	Watermelon (Charleston Gray)	lsiwcgB406
Lsi07G004150	MELO3C017840.2	Melon (DHL92) v3.6.1	lsimedB465
Lsi07G004150	Cla97C07G138950	Watermelon (97103) v2	lsiwmbB405
Lsi07G004150	Bhi01G002808	Wax gourd	lsiwgoB558
Lsi07G004150	Cp4.1LG03g13570	Cucurbita pepo (Zucchini)	cpelsiB515
Lsi07G004150	CsGy4G001930	Cucumber (Gy14) v2	cgyblsiB285
Lsi07G004150	Carg06531	Silver-seed gourd	carlsiB109
Lsi07G004150	CsaV3_4G001960	Cucumber (Chinese Long) v3	cuclsiB331

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi07G004150	Bottle gourd (USVL1VR-Ls)	lsilsiB117
Lsi07G004150	Cucumber (Gy14) v1	cgylsiB136
Lsi07G004150	Cucurbita maxima (Rimu)	cmalsiB449
Lsi07G004150	Cucurbita maxima (Rimu)	cmalsiB450
Lsi07G004150	Cucurbita moschata (Rifu)	cmolsiB436
Lsi07G004150	Cucurbita moschata (Rifu)	cmolsiB437
Lsi07G004150	Cucurbita pepo (Zucchini)	cpelsiB472
Lsi07G004150	Cucurbita pepo (Zucchini)	cpelsiB476
Lsi07G004150	Cucurbita pepo (Zucchini)	cpelsiB516
Lsi07G004150	Wild cucumber (PI 183967)	cpilsiB546
Lsi07G004150	Melon (DHL92) v3.5.1	lsimeB430
Lsi07G004150	Watermelon (Charleston Gray)	lsiwcgB387
Lsi07G004150	Cucumber (Gy14) v2	cgyblsiB502
Lsi07G004150	Melon (DHL92) v3.6.1	lsimedB451
Lsi07G004150	Silver-seed gourd	carlsiB182
Lsi07G004150	Silver-seed gourd	carlsiB183
Lsi07G004150	Cucumber (Chinese Long) v3	cuclsiB568
Lsi07G004150	Watermelon (97103) v2	lsiwmbB420