CmoCh14G014130 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.GAACCAAACAGAACTTTGCGGACGTGGCCAACAACTACGGGCGCAGAGTGAAGGAGCAAAGATAATTTTGCGGTGGGCGTTAAAAGAGAAGAGGATAAGAGAGAAAATGGCAGCGACGGCGGCAGCAACCGGAGCTTGGAAGATCGGCGTTCCGGCTCCGGTCAAATCTGAAAAGAAGCCGCCGACGAACTTCACGAGGCTCACAGTTCGCTATCCAAATTGCTTTCTCAATACGCGGCCGAAAGTTCCTGCCATTCGAGCACTTGGACAAGAAGGGAATTCGAGCGGCGGCGACGACGACACCGGCATCAGTCAGGTGTGTGTTTCTTTCTAATTGTGTCTTCAAGTTAATACGCTTTGCATATTTCTGATACCACTTGATAATTCTAGGGCTAATTAGCTGAATAATCTAGGCTGAATGCGGGAGAAATCGATAGAATTCTATAATTGACCACTTTTACTGTATTTGACGAGGAAATCTGGAATTGAGTATACCAGCTGCATCAGGTTCTTGTTAGGTCGAGTATGCGTTCCTCTCGTCTTTCGATAATCAAACCTGGAAAAAGAATGGATTTCATGTTCACGATGATTTATTGTAACGGTACAAGCCCACTACTAGCAGAATTCTCGATGTTTCGTTCTCCTCCCCCACCGATGTGGGATCATTTATTGTAACGGCACAAGCTCACTGCTAGCAGATACTGTCCTCGATGTTTCATTCTCTTCCCCAGCCGACGTGGGATCTCACAATCCACCCCCTTTCAAGTCCTAGCGTCCTCGTTGGCACTCGTTCTCTTCTCCAATCGATATGAGACCCCCAAATCCACTCCCTTCAAGATCCAGTGTCATTGCTTGCACATCACCTCATGTCCACTGTCTTCGAGGCTCAGCTTCCTCGCTAACACATCGCCTTGTGTTCACCCCCTTTTGAGGCTTAACCTCCTCACCGGCACATCACCCCGTGTCTGGCTCTAATACCATTTGTAACGGTCCAAGCCCACCGCTAACAAATATTGTCCTACTTTGGCTTTTCCTTTCAGACCTACCCTCAAAGGTTTTTAAAACATCTGTTAGGGAGAGGTTTCCACACCCTTTATAAAGGGTGTTTCGTTCTCCTTCCCAACCGATGTGAGATCTCACATTTATCCATGCATTCTCAACTCTAATATGTATCCAATTCATTTTTAGACAATTTCCTTTCAAGATCATCATCATAGTTCAGTAAATTCGGAATGAGTATAATCAATAATTATGGGGTAAGATCTAAAAGAGGATGATATGAGGATATATAGCAACAATTTATTCACTTACTGTGTACTATGATGCAGGAGGATGTGCAGTTTGTGTTGAAAATGGCAGCAGGTTCCATAGCAGTGGGCGGTGGAATAAAGTATGGAAGCATAATCTTTCCGGAGATGACCAAACCCAATATTGTACAAGCTCTTATTATGGTATCAACTCCTGTGGTTGTAGCCATATGGCTTTTGATCAACCAAAGTCGTCAAGACAGACAAAGCTAA GAACCAAACAGAACTTTGCGGACGTGGCCAACAACTACGGGCGCAGAGTGAAGGAGCAAAGATAATTTTGCGGTGGGCGTTAAAAGAGAAGAGGATAAGAGAGAAAATGGCAGCGACGGCGGCAGCAACCGGAGCTTGGAAGATCGGCGTTCCGGCTCCGGTCAAATCTGAAAAGAAGCCGCCGACGAACTTCACGAGGCTCACAGTTCGCTATCCAAATTGCTTTCTCAATACGCGGCCGAAAGTTCCTGCCATTCGAGCACTTGGACAAGAAGGGAATTCGAGCGGCGGCGACGACGACACCGGCATCAGTCAGGAGGATGTGCAGTTTGTGTTGAAAATGGCAGCAGGTTCCATAGCAGTGGGCGGTGGAATAAAGTATGGAAGCATAATCTTTCCGGAGATGACCAAACCCAATATTGTACAAGCTCTTATTATGGTATCAACTCCTGTGGTTGTAGCCATATGGCTTTTGATCAACCAAAGTCGTCAAGACAGACAAAGCTAA ATGGCAGCGACGGCGGCAGCAACCGGAGCTTGGAAGATCGGCGTTCCGGCTCCGGTCAAATCTGAAAAGAAGCCGCCGACGAACTTCACGAGGCTCACAGTTCGCTATCCAAATTGCTTTCTCAATACGCGGCCGAAAGTTCCTGCCATTCGAGCACTTGGACAAGAAGGGAATTCGAGCGGCGGCGACGACGACACCGGCATCAGTCAGGAGGATGTGCAGTTTGTGTTGAAAATGGCAGCAGGTTCCATAGCAGTGGGCGGTGGAATAAAGTATGGAAGCATAATCTTTCCGGAGATGACCAAACCCAATATTGTACAAGCTCTTATTATGGTATCAACTCCTGTGGTTGTAGCCATATGGCTTTTGATCAACCAAAGTCGTCAAGACAGACAAAGCTAA
BLAST of CmoCh14G014130 vs. TrEMBL
Match: A0A0A0KWZ3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G006440 PE=4 SV=1) HSP 1 Score: 178.7 bits (452), Expect = 4.6e-42 Identity = 100/145 (68.97%), Postives = 111/145 (76.55%), Query Frame = 1
BLAST of CmoCh14G014130 vs. TrEMBL
Match: D7U152_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_09s0002g07220 PE=4 SV=1) HSP 1 Score: 89.7 bits (221), Expect = 2.8e-15 Identity = 46/99 (46.46%), Postives = 68/99 (68.69%), Query Frame = 1
BLAST of CmoCh14G014130 vs. TrEMBL
Match: U5GUQ6_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s20930g PE=4 SV=1) HSP 1 Score: 83.6 bits (205), Expect = 2.0e-13 Identity = 48/96 (50.00%), Postives = 61/96 (63.54%), Query Frame = 1
BLAST of CmoCh14G014130 vs. TrEMBL
Match: A0A068TS55_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00022174001 PE=4 SV=1) HSP 1 Score: 83.6 bits (205), Expect = 2.0e-13 Identity = 51/135 (37.78%), Postives = 76/135 (56.30%), Query Frame = 1
BLAST of CmoCh14G014130 vs. TrEMBL
Match: A9PHG7_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1) HSP 1 Score: 82.4 bits (202), Expect = 4.5e-13 Identity = 45/77 (58.44%), Postives = 58/77 (75.32%), Query Frame = 1
BLAST of CmoCh14G014130 vs. TAIR10
Match: AT3G15900.1 (AT3G15900.1 unknown protein) HSP 1 Score: 67.0 bits (162), Expect = 9.9e-12 Identity = 40/119 (33.61%), Postives = 65/119 (54.62%), Query Frame = 1
BLAST of CmoCh14G014130 vs. NCBI nr
Match: gi|778689663|ref|XP_004152177.2| (PREDICTED: uncharacterized protein LOC101209077 [Cucumis sativus]) HSP 1 Score: 178.7 bits (452), Expect = 6.6e-42 Identity = 100/145 (68.97%), Postives = 111/145 (76.55%), Query Frame = 1
BLAST of CmoCh14G014130 vs. NCBI nr
Match: gi|659108397|ref|XP_008454177.1| (PREDICTED: uncharacterized protein LOC103494660 [Cucumis melo]) HSP 1 Score: 177.9 bits (450), Expect = 1.1e-41 Identity = 99/137 (72.26%), Postives = 110/137 (80.29%), Query Frame = 1
BLAST of CmoCh14G014130 vs. NCBI nr
Match: gi|645245078|ref|XP_008228711.1| (PREDICTED: uncharacterized protein LOC103328098 [Prunus mume]) HSP 1 Score: 99.8 bits (247), Expect = 3.9e-18 Identity = 58/120 (48.33%), Postives = 76/120 (63.33%), Query Frame = 1
BLAST of CmoCh14G014130 vs. NCBI nr
Match: gi|657964702|ref|XP_008373985.1| (PREDICTED: uncharacterized protein LOC103437287 [Malus domestica]) HSP 1 Score: 96.3 bits (238), Expect = 4.3e-17 Identity = 59/144 (40.97%), Postives = 90/144 (62.50%), Query Frame = 1
BLAST of CmoCh14G014130 vs. NCBI nr
Match: gi|747088485|ref|XP_011091834.1| (PREDICTED: uncharacterized protein LOC105172173 [Sesamum indicum]) HSP 1 Score: 92.0 bits (227), Expect = 8.2e-16 Identity = 47/91 (51.65%), Postives = 64/91 (70.33%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|