Lsi07G003690 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi07G003690
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Jasmonate-zim-domain protein 10, putative
Location	chr07 : 3954215 .. 3958537 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTGGACTCTGATCTTTCATAATCAAAATCCTTCACTCTCTTTCTCTCACACTTTCAGTTCGTTCCTCAAAATATGTCCATTGTTGAGCTTGATTTCTTCGCCATGGAAAATCAATCCGCTGCCTCAAAATCCTCTCTCTTCCGTCGCCAAAGAAGCTTCAAAGGTTCGTTCCAGTACACCTCTCTGATCTTAATTTCTCAATCGTTTTTTAGGTTTTCAAAATAATTATGCGATTCTACTGTTTCTACTCAGATATTCAGAGCGCCATTTCCAAAATCAATCCTGCGATTCTCAAATCTCTTATTGTCTCTGGCTCTGCCGATCATTGTTCTGATTTCACTATTCCGATTGCGATTTCTCGGAAATTTCCATTGCCGACACCGTATCGGAGTGCTAATGAAGATCACAATCTCTCGACAGTACTGCCTGTTTATTCCGCATCTACATCTAGGCATTCTTCTAATCCTCTGTAATCGTAATTTGTTGTTTGATCTCTGAAACTGTATTTGTTGTTGTTTGAAAATGTTGATTTGATTGTGGTTGTTGATTTTCAGGTTGAGTCCAGAGATCGCTTCCGATAAATATCCTCTAACGATTTTCTACAATGAAACCGTCGCCGTTTTCCACGTTTCTCGTGATGAGGTATCATTCATTCAAACCATTTCCTCTTCCTTTCCACCATGTACGGAATTCAACCACTTTATTTTTTTTATTTTTTATTTTTTATTTTTTTAAATTAATTTTTTTTATATTATAATGTATTCTTCCTAATTTTCTGCCAAAATCAACCCCCATGAGTTTGTATATTTTAATCCTTGTATCCATTTAAAGTCCAAAGTTTCATAAAATGAAATATAAACTCCGAGTTTCCTAAATAAGAAAAAAAAACCGAGCTAGATTGACCTTAGAAGTGATGCGTCTAATTTTTATTTGGTTCATAAATTTTAAAATGTTACCCATTTAGTTCTTAAGTTTTTTTATTTGATGTCTCTGATGTTCATAGGCATTGAGTTAAACTTTTCTTCTTTGAGTCATCTAAGTTTTGTTTCAATTTAATCTAAAATTTATACTTTTAACATCTAAGAGTTAATGTATGTTTATTAATTTAAAATAATTAAAATAATTATAACTAATCAAGTTTCACTAATTTTCATCACTATTAAAATTAGACTTAGAATTTCACTTTATAATTATTTTAAATTAATTAATAGGCATTGACGTTAATGATTGAAATTGAACATTTAAGGAAAAATTAAGGTTAAAAGTATAATTCTTGGAACTGAAGGACTAAAGTAAAACAAAACTCAATTTTCAAGAGTAAAATTGTAATATTTTGAAATTTAGAGACTAAATTGAAACTAAATTTGAAACTTAAAGACTAAATTTTGAAAACTTAGGGACCAAGTAAAAATTAGACCTAAAACCTAAAGACCAAAATGATATTTTTTTTTTCCAAAAATTATTAGTTGTGTTTACTTGGTATAGATAACAAGTTGTTTTTACAATGACAATATGTTCATAGTTAAGTTCAAGAGATTGGAGGTTTGCATTTTTGAAAAAAAGAAAAGAGTTGTACATGAAATATTGATAGCATTCAAATGTGTAATTAAAAACTCGATGGTGGATATTACTTTATTATTTGTTGGGATGAACACTTTTGTTTTTAATTCTACTAGTCGTAAATTTATATTATATTTGAGAGTCATGGATTCATTATTCTTGTATCGTCATTCCATTTATTAATGGGATTTGATTAAAGTAAAGTTATTTTAAAATTTTATTCATGTTTTAAATCCCTTGCTTTTACTTGCACCTTTTGCAAAAGAATAATTTACTTAATATTTCATAATTGACACGTTTTTTTAGTGTATAGTGTTGAAATTAGTAGATATTGTTAGAATTGATAAATTCTTTTTAAGGTTTAAATACTATTTTGGTTTCTGTACTTTTGAATTTGATTCATTTTGGTCATTGTATTTTTAAAATGTTTATTCTGGTCTCTATACTTTCATTTTTGGTCACTTTTTGAAAGTACAAGGACCAAAATGAACCACAGTTAAAAATATAGGGACCAAAATAAACATTTTGAAAGTATAATGACGAAAATAAACTAAAATTAAAAGTATATAGACCAGAGTAGTATTCAAGCCTTAACTTTAATTAGTTTGATACTATCATATAAGTAACTAGATGGACTTTGTCCACATGAAAATGACTCAACTAAAAAATTAAATGATCGAATTCATCTTAAATGGTAAATAAATTAAAACTTTTTTATAGGTTTGAATTCTCATTCCCTATGTTTATACTAAAAATTTTAATTTATCACAGTGAAATTAAATCAAATTATTTAGGCCTCATTTGGTAACTATTTGATTTTTGGTTTTTAGTTTTTGAAAATTGAGTCTATTTCATCTAAATTTTTACCTTGATTTTCATATTTCTTTAAGTAAAATAGCTAAATTCTTAGTCAAATTCTACAAACAAAAACAAGTTTTTTAAAAACTATTTTTTTAATTTTTAAAACTTAGCTTGATTTTAGAAAAATATTGGTAAAAAGTAAATAACAAAATAAAGATGTTTAGAGGTGAAAAGAATGTTTATAAGCTTAATTTTAAAAAATTAAAAATAAAAAAAAGTAAGTGGTGTCTTTTTTTTTTTTTTTAATAAATTGTGTCTTAATTAATGATTTTTTTTAAAATAATATACTTTCAATTACTTTTAATAAAAAAAACTATATTTGTAAATTCTATTAAAAAAAATAATTGTTACCGATCAAAATTAAAAAAAAAAAGAAGAAAATTCCTCTTTAAATTTCTCAAATATATTATATTATAATTAATGGTGTTACTCCTTTCTAACCATGTACGGCGTACGTACGCTATACTCCCACAAATAGTTCAAAAGCATTCTGAGGTTTGCCGAAACGGGCAGCAGCGCTAGCAATGGGAAGGGTGAAGCTGAAAAAGGAAAATCAATGGCTGAAATTCCTTCAAATCAGCACCAACGACTGGTGGACGTTGATCCTCAAGATGAGGGTACGTATATCGTAAATTTTTAAATTAAATTTTTTTTTTTACTTATTCCGTAGACATTAATTATTTGGAAGAAAAGGCTTGTGAGTTGTGAGTCTTGTGACCTGTGTGAGAGTAGGCAAAAATAGAATAAATGATGTTATAGCAACATGAGTTAAAAATGAACAAAATTTTACCATGGTTAAATTTTCTGGAGATGATGGTGGGTCAGCCGCCCAGCTTTTTTGTTTGTTTTCAAAATTTGTGCATCTTCTACTACATATATTCTTTTTAGTCATACAAAATACTTTGATGTGCTTGAACCAATCGTTAGGTTCATGTCGACTTATATCTCTCTCAACCGATGAATCAGCCTTTGATAGAGCTTATGGCTAGGAATGTTCATGATTTGATTTGGAATCGAATTAAACCATTTGTCAAAATGGTTTGATTCGAATCGAACCAAACTGAATCGTAAATATTTGGTTCATTTTCTCTTTGGTTTAGTTTTTTGATTTTATATATTATATATATAATATAAATTGTAAGGTTCGATTTTGTATTCGATTTTCAAATCTAAAATCGAAAAAATATTTTTTTTAAAATTAATTAATTTTTTTTTTAACTAAATTGAATCTGACACTTTCGTTAAAAACTGAATTTTTAGTTTGATTCGGTTTGATTTTGTCATTCGGTTCAATTTGGTTAGTTTTAATGTTCACCCTTATTCATGGTGCAATAAAGTGTAATACTCTTTCGAGACTTAATGCAAATAACAAATTTTTTTCTTTTTTAGGTGAGGTGCACTATATATATAAATACAACTTGAAGAAGAAAAAGACATAGTTGAAGTGGGAATATAGAAAAAAAAAATCCCCTAAACACAAGAAATTTTGCATTTTAGACTTAGTAATATGTATTTTTTAATTATTAAAGAAAGAAAAAAATTCTTACCTAGGACTCAGAAAATACACCATAACTGAGAGGGCTTTTTAAAACATGACTAATACCGATGAAATTCGAAGTACACTTTATAATTCCATCTAAGCCTTATACTATAACACTTCAATGTACTTTTCCAAAAATTAATCTTAAAATAAATGTTGTGTGTTGATTAATTTGTTTGTAGATCTTCCATTGGCAAGGAAAAGGTCACTTCAGAGATTTTTGGAGAAGCGCAAGGAGAGGTAACAGCCCCCCCAATGTTGATTTACATAGCTTTCATTAGATATATGGTGAGATAATTTAATTCAGTCTACACTAGATTTCTCTGTTTATGTGTGATACATATGCTAAAAACAAGATCAT

mRNA sequence

ATTGGACTCTGATCTTTCATAATCAAAATCCTTCACTCTCTTTCTCTCACACTTTCAGTTCGTTCCTCAAAATATGTCCATTGTTGAGCTTGATTTCTTCGCCATGGAAAATCAATCCGCTGCCTCAAAATCCTCTCTCTTCCGTCGCCAAAGAAGCTTCAAAGATATTCAGAGCGCCATTTCCAAAATCAATCCTGCGATTCTCAAATCTCTTATTGTCTCTGGCTCTGCCGATCATTGTTCTGATTTCACTATTCCGATTGCGATTTCTCGGAAATTTCCATTGCCGACACCGTATCGGAGTGCTAATGAAGATCACAATCTCTCGACAGTACTGCCTGTTTATTCCGCATCTACATCTAGGCATTCTTCTAATCCTCTGTTGAGTCCAGAGATCGCTTCCGATAAATATCCTCTAACGATTTTCTACAATGAAACCGTCGCCGTTTTCCACGTTTCTCGTGATGAGTTCAAAAGCATTCTGAGGTTTGCCGAAACGGGCAGCAGCGCTAGCAATGGGAAGGGTGAAGCTGAAAAAGGAAAATCAATGGCTGAAATTCCTTCAAATCAGCACCAACGACTGGTGGACGTTGATCCTCAAGATGAGGGTACATCTTCCATTGGCAAGGAAAAGGTCACTTCAGAGATTTTTGGAGAAGCGCAAGGAGAGGTAACAGCCCCCCCAATGTTGATTTACATAGCTTTCATTAGATATATGGTGAGATAATTTAATTCAGTCTACACTAGATTTCTCTGTTTATGTGTGATACATATGCTAAAAACAAGATCAT

Coding sequence (CDS)

ATGTCCATTGTTGAGCTTGATTTCTTCGCCATGGAAAATCAATCCGCTGCCTCAAAATCCTCTCTCTTCCGTCGCCAAAGAAGCTTCAAAGATATTCAGAGCGCCATTTCCAAAATCAATCCTGCGATTCTCAAATCTCTTATTGTCTCTGGCTCTGCCGATCATTGTTCTGATTTCACTATTCCGATTGCGATTTCTCGGAAATTTCCATTGCCGACACCGTATCGGAGTGCTAATGAAGATCACAATCTCTCGACAGTACTGCCTGTTTATTCCGCATCTACATCTAGGCATTCTTCTAATCCTCTGTTGAGTCCAGAGATCGCTTCCGATAAATATCCTCTAACGATTTTCTACAATGAAACCGTCGCCGTTTTCCACGTTTCTCGTGATGAGTTCAAAAGCATTCTGAGGTTTGCCGAAACGGGCAGCAGCGCTAGCAATGGGAAGGGTGAAGCTGAAAAAGGAAAATCAATGGCTGAAATTCCTTCAAATCAGCACCAACGACTGGTGGACGTTGATCCTCAAGATGAGGGTACATCTTCCATTGGCAAGGAAAAGGTCACTTCAGAGATTTTTGGAGAAGCGCAAGGAGAGGTAACAGCCCCCCCAATGTTGATTTACATAGCTTTCATTAGATATATGGTGAGATAA

Protein sequence

MSIVELDFFAMENQSAASKSSLFRRQRSFKDIQSAISKINPAILKSLIVSGSADHCSDFTIPIAISRKFPLPTPYRSANEDHNLSTVLPVYSASTSRHSSNPLLSPEIASDKYPLTIFYNETVAVFHVSRDEFKSILRFAETGSSASNGKGEAEKGKSMAEIPSNQHQRLVDVDPQDEGTSSIGKEKVTSEIFGEAQGEVTAPPMLIYIAFIRYMVR

Homology

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BLAST of Lsi07G003690 vs. Swiss-Prot
Match: TIF9_ARATH (Protein TIFY 9 OS=Arabidopsis thaliana GN=TIFY9 PE=1 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 9.9e-11
Identity = 58/147 (39.46%), Postives = 80/147 (54.42%), Query Frame = 1


Query: 4   VELDFFAME----NQSAASKSSLFR-RQRSFKDIQSAISKINPAILKSLIVSGSADHCSD 63
           +ELDF  +E    N +   K   F  R+RSF+DIQ AISKI+P I+KSL+ S   +  S 
Sbjct: 6   IELDFLGLEKKQTNNAPKPKFQKFLDRRRSFRDIQGAISKIDPEIIKSLLASTGNNSDSS 65

Query: 64  FTIPIAISRKFPLPTPYRSANEDHNLSTVLPVYSASTSRHSSNPLLSPEIASDKYPLTIF 123
                A SR  P  TP     ED     + PV+ AS +R S+      E+ S   P+TIF
Sbjct: 66  -----AKSRSVP-STP----REDQPQIPISPVH-ASLARSST------ELVSGTVPMTIF 125

Query: 124 YNETVAVFHVSRDEFKSILRFAETGSS 146
           YN +V+VF VSR++   I++ A   +S
Sbjct: 126 YNGSVSVFQVSRNKAGEIMKVANEAAS 135

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BLAST of Lsi07G003690 vs. TrEMBL
Match: A0A0A0KX64_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G009880 PE=4 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 2.4e-56
Identity = 134/181 (74.03%), Postives = 144/181 (79.56%), Query Frame = 1


Query: 1   MSIVELDFFAMENQSAAS--KSSLFRRQRSFKDIQSAISKINPAILKSLIVSGSADHCSD 60
           MS VELDFFAMENQS+++   S+LFRRQRSFKDIQSAISKINPAILKSLIVSGSADH SD
Sbjct: 1   MSTVELDFFAMENQSSSTPANSTLFRRQRSFKDIQSAISKINPAILKSLIVSGSADHHSD 60

Query: 61  FTIPIAISRKFPLPTPYRSANEDHNLSTVLPVYSASTSRHSSNPLLSPEIASD-KYPLTI 120
           FT+P AIS KF      RS N D NLST LPVYS S SR      LS EI SD KYPLTI
Sbjct: 61  FTVPFAISPKF------RSPNSDRNLSTTLPVYSPSESR------LSSEIGSDDKYPLTI 120

Query: 121 FYNETVAVFHVSRDEFKSILRFAETGSSASNGKGEAEKGKSMAEIPSNQHQRLVDVDPQD 179
           FYNETVAVFHVSRDE KSIL FAE   S SNGK  AE+ KS+AEIPSNQ+Q+L+DVDPQD
Sbjct: 121 FYNETVAVFHVSRDEAKSILTFAEKSRSNSNGKSGAEQEKSVAEIPSNQYQQLLDVDPQD 169

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BLAST of Lsi07G003690 vs. TrEMBL
Match: B9GZA6_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0003s16350g PE=4 SV=2)

HSP 1 Score: 104.0 bits (258), Expect = 2.4e-19
Identity = 73/145 (50.34%), Postives = 91/145 (62.76%), Query Frame = 1


Query: 4   VELDFFAM--ENQSAASKSSLFRRQRSFKDIQSAISKINPAILKSLIVSGSADHCSDFTI 63
           VELDFF M  EN+S++SKS  F RQRSF+DIQSAISKINP +LKS+I SGSA + +    
Sbjct: 8   VELDFFGMSKENRSSSSKSKCFNRQRSFRDIQSAISKINPELLKSVIASGSASNKATPAN 67

Query: 64  PIAISRK-FPLPTPYRSANEDHNLSTVLPVYSASTSRHSSNPLLSPEIASDKYPLTIFYN 123
              +S K F +P+   +  +D      LPVY      +  NP   PE A    PLTIFYN
Sbjct: 68  GNQLSNKAFSVPS---TPKQDLPPFPALPVYFPLPRLNLENP---PETA----PLTIFYN 127

Query: 124 ETVAVFHVSRDEFKSILRFAETGSS 146
            TVAVF V RD+ ++IL+ AE G S
Sbjct: 128 GTVAVFDVPRDKAENILKLAEKGFS 142

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BLAST of Lsi07G003690 vs. TrEMBL
Match: D7U618_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0146g00480 PE=4 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 2.0e-18
Identity = 67/172 (38.95%), Postives = 97/172 (56.40%), Query Frame = 1


Query: 4   VELDFFAMENQSAASKSSLFR---RQRSFKDIQSAISKINPAILKSLIVSGSADHCSDFT 63
           +ELDFF ME   A +KS   R   R+RSF+ +QSAISKINP +LK++I SGS        
Sbjct: 6   MELDFFGMEKDGATAKSQFQRFSDRRRSFRGMQSAISKINPDLLKTVIASGSVSQAPKNN 65

Query: 64  IPIAISRKFPLPTPYRSANEDHNLSTVLPVYSASTSRHSSNPLLSPEIASDKYPLTIFYN 123
            P A  + F +P+   +   D N    LPVYS         P+  P ++++  P+TIFYN
Sbjct: 66  PPFASRKSFSVPS---TPKADQNYLPALPVYS---------PVFRP-VSAETTPITIFYN 125

Query: 124 ETVAVFHVSRDEFKSILRFAETGSSASNGKGEAEKGKSMAEIPSNQHQRLVD 173
            TV+VF VS ++ +SI++ A  GS+ +      E   S   IP N+ Q+L++
Sbjct: 126 GTVSVFDVSPEQIESIMKLALDGSTKT-----VEPADSKLAIPPNEEQQLLE 159

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BLAST of Lsi07G003690 vs. TrEMBL
Match: A0A067JH87_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23114 PE=4 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 3.4e-18
Identity = 82/196 (41.84%), Postives = 104/196 (53.06%), Query Frame = 1


Query: 4   VELDFFAMENQSAASKS---SLFRRQRSFKDIQSAISKINPAILKSLIVSGSADHCSDFT 63
           VELDFF ME ++A+SKS      RRQ+SF+DIQSAISKINP +LKS+I SGSA+      
Sbjct: 6   VELDFFGME-RAASSKSRFPKFLRRQKSFRDIQSAISKINPELLKSVIASGSANQLHS-- 65

Query: 64  IPIAISRKFPLPTPYRSANEDHNLSTVLPVYSASTSRHSSNPLLSPEIASDKYPLTIFYN 123
              A  + F  P P  +  ED      LPVYS        NP   P++A    PLTIFYN
Sbjct: 66  --PASGKTFSPPVP-STPKEDAIRFPPLPVYSPLQRPVLENP---PQVA----PLTIFYN 125

Query: 124 ETVAVFHVSRDEFKSILRFAETGSSAS-------------NGKGEAEKGKSMAEIPSNQH 183
            TVAVF V RD+ ++IL+ AE G S S              G     + KS+      ++
Sbjct: 126 GTVAVFDVPRDKAETILKLAEHGISTSVELINQQQILDNLEGDLPIARRKSLQRFLEKRN 185

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BLAST of Lsi07G003690 vs. TrEMBL
Match: B9GMR3_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s13240g PE=4 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 9.9e-18
Identity = 78/207 (37.68%), Postives = 114/207 (55.07%), Query Frame = 1


Query: 4   VELDFFAM--ENQSAASKSSLFRRQRSFKDIQSAISKINPAILKSLIVSGSA------DH 63
           VELDFFAM  EN+S+ SKS    RQRSF+DIQSAISKINP +LKS+I SGSA      ++
Sbjct: 7   VELDFFAMGKENKSSPSKSKFLNRQRSFRDIQSAISKINPELLKSVIASGSAATKTTPEN 66

Query: 64  CSDFTIPIAISRKFPLPTPYRSANEDHNLSTVLPVYSASTSRHSSNPLLSPEIASDKYPL 123
            + F+     ++ F +P+   +  ++      LP+YS        N ++ PE A    PL
Sbjct: 67  GNQFS-----NKSFSVPS---TPKQEQPSFPALPLYSPLP---RPNMMIPPETA----PL 126

Query: 124 TIFYNETVAVFHVSRDEFKSILRFAETGSSASNGKGEAEKGKSMAEIPSNQHQRLVDVDP 183
           TIFYN TVAVF+V RD+ ++IL+ AE   S ++        + M +  ++Q Q    +D 
Sbjct: 127 TIFYNGTVAVFNVPRDKAENILKLAEKRISKTS-------AEPMTDPKTDQQQLFESLDG 186

Query: 184 QDEGTSSIGKEKVTSEIFGEAQGEVTA 203
            D     I + K       + +G +T+
Sbjct: 187 AD---LPIARRKSLQRFLEKRKGRLTS 188

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BLAST of Lsi07G003690 vs. TAIR10
Match: AT5G13220.1 (AT5G13220.1 jasmonate-zim-domain protein 10)

HSP 1 Score: 68.6 bits (166), Expect = 5.6e-12
Identity = 58/147 (39.46%), Postives = 80/147 (54.42%), Query Frame = 1


Query: 4   VELDFFAME----NQSAASKSSLFR-RQRSFKDIQSAISKINPAILKSLIVSGSADHCSD 63
           +ELDF  +E    N +   K   F  R+RSF+DIQ AISKI+P I+KSL+ S   +  S 
Sbjct: 6   IELDFLGLEKKQTNNAPKPKFQKFLDRRRSFRDIQGAISKIDPEIIKSLLASTGNNSDSS 65

Query: 64  FTIPIAISRKFPLPTPYRSANEDHNLSTVLPVYSASTSRHSSNPLLSPEIASDKYPLTIF 123
                A SR  P  TP     ED     + PV+ AS +R S+      E+ S   P+TIF
Sbjct: 66  -----AKSRSVP-STP----REDQPQIPISPVH-ASLARSST------ELVSGTVPMTIF 125

Query: 124 YNETVAVFHVSRDEFKSILRFAETGSS 146
           YN +V+VF VSR++   I++ A   +S
Sbjct: 126 YNGSVSVFQVSRNKAGEIMKVANEAAS 135

[Close]

BLAST of Lsi07G003690 vs. NCBI nr
Match: gi|449468880|ref|XP_004152149.1| (PREDICTED: protein TIFY 9 [Cucumis sativus])

HSP 1 Score: 226.9 bits (577), Expect = 3.5e-56
Identity = 134/181 (74.03%), Postives = 144/181 (79.56%), Query Frame = 1


Query: 1   MSIVELDFFAMENQSAAS--KSSLFRRQRSFKDIQSAISKINPAILKSLIVSGSADHCSD 60
           MS VELDFFAMENQS+++   S+LFRRQRSFKDIQSAISKINPAILKSLIVSGSADH SD
Sbjct: 1   MSTVELDFFAMENQSSSTPANSTLFRRQRSFKDIQSAISKINPAILKSLIVSGSADHHSD 60

Query: 61  FTIPIAISRKFPLPTPYRSANEDHNLSTVLPVYSASTSRHSSNPLLSPEIASD-KYPLTI 120
           FT+P AIS KF      RS N D NLST LPVYS S SR      LS EI SD KYPLTI
Sbjct: 61  FTVPFAISPKF------RSPNSDRNLSTTLPVYSPSESR------LSSEIGSDDKYPLTI 120

Query: 121 FYNETVAVFHVSRDEFKSILRFAETGSSASNGKGEAEKGKSMAEIPSNQHQRLVDVDPQD 179
           FYNETVAVFHVSRDE KSIL FAE   S SNGK  AE+ KS+AEIPSNQ+Q+L+DVDPQD
Sbjct: 121 FYNETVAVFHVSRDEAKSILTFAEKSRSNSNGKSGAEQEKSVAEIPSNQYQQLLDVDPQD 169

[Close]

BLAST of Lsi07G003690 vs. NCBI nr
Match: gi|659108284|ref|XP_008454115.1| (PREDICTED: protein TIFY 9-like [Cucumis melo])

HSP 1 Score: 223.8 bits (569), Expect = 2.9e-55
Identity = 134/184 (72.83%), Postives = 143/184 (77.72%), Query Frame = 1


Query: 1   MSIVELDFFAMENQSAAS-----KSSLFRRQRSFKDIQSAISKINPAILKSLIVSGSADH 60
           MSIVELDFFAMENQS+A+      S+LFRRQRS KDIQSAISKINPAILKSLIVSGS DH
Sbjct: 1   MSIVELDFFAMENQSSAAATTAANSTLFRRQRSLKDIQSAISKINPAILKSLIVSGSPDH 60

Query: 61  CSDFTIPIAISRKFPLPTPYRSANEDHNLSTVLPVYSASTSRHSSNPLLSPEIASD-KYP 120
            SDFT+P AIS KF      RS N D NL T LPVYSAS SR      LS EI SD KYP
Sbjct: 61  RSDFTVPSAISPKF------RSPNSDRNLLTTLPVYSASESR------LSSEIGSDDKYP 120

Query: 121 LTIFYNETVAVFHVSRDEFKSILRFAETGSSASNGKGEAEKGKSMAEIPSNQHQRLVDVD 179
           LTIFYNETVAVFHVSRDE KSIL FAE   S SN K  AE+GKS+AEIPSNQ+Q+L+DVD
Sbjct: 121 LTIFYNETVAVFHVSRDEAKSILTFAEKSRSNSNEKSGAERGKSVAEIPSNQYQQLLDVD 172

[Close]

BLAST of Lsi07G003690 vs. NCBI nr
Match: gi|743819283|ref|XP_011020846.1| (PREDICTED: protein TIFY 9-like [Populus euphratica])

HSP 1 Score: 105.1 bits (261), Expect = 1.5e-19
Identity = 74/145 (51.03%), Postives = 91/145 (62.76%), Query Frame = 1


Query: 4   VELDFFAM--ENQSAASKSSLFRRQRSFKDIQSAISKINPAILKSLIVSGSADHCSDFTI 63
           VELDFF M  EN+S++SKS  F RQRSF+DIQSAISKINP +LKS+I SGSA + S    
Sbjct: 8   VELDFFGMSKENRSSSSKSKCFNRQRSFRDIQSAISKINPELLKSVIASGSASNKSTPAD 67

Query: 64  PIAISRK-FPLPTPYRSANEDHNLSTVLPVYSASTSRHSSNPLLSPEIASDKYPLTIFYN 123
              +S K F +P+   +  +D      LPVY      +  NP   PE A    PLTIFYN
Sbjct: 68  GNQLSNKAFSVPS---TPKQDLPPFPALPVYFPLPRLNLENP---PETA----PLTIFYN 127

Query: 124 ETVAVFHVSRDEFKSILRFAETGSS 146
            TVAVF V RD+ ++IL+ AE G S
Sbjct: 128 GTVAVFDVPRDKAENILKLAEKGFS 142

[Close]

BLAST of Lsi07G003690 vs. NCBI nr
Match: gi|566163000|ref|XP_002304653.2| (hypothetical protein POPTR_0003s16350g [Populus trichocarpa])

HSP 1 Score: 104.0 bits (258), Expect = 3.4e-19
Identity = 73/145 (50.34%), Postives = 91/145 (62.76%), Query Frame = 1


Query: 4   VELDFFAM--ENQSAASKSSLFRRQRSFKDIQSAISKINPAILKSLIVSGSADHCSDFTI 63
           VELDFF M  EN+S++SKS  F RQRSF+DIQSAISKINP +LKS+I SGSA + +    
Sbjct: 8   VELDFFGMSKENRSSSSKSKCFNRQRSFRDIQSAISKINPELLKSVIASGSASNKATPAN 67

Query: 64  PIAISRK-FPLPTPYRSANEDHNLSTVLPVYSASTSRHSSNPLLSPEIASDKYPLTIFYN 123
              +S K F +P+   +  +D      LPVY      +  NP   PE A    PLTIFYN
Sbjct: 68  GNQLSNKAFSVPS---TPKQDLPPFPALPVYFPLPRLNLENP---PETA----PLTIFYN 127

Query: 124 ETVAVFHVSRDEFKSILRFAETGSS 146
            TVAVF V RD+ ++IL+ AE G S
Sbjct: 128 GTVAVFDVPRDKAENILKLAEKGFS 142

[Close]

BLAST of Lsi07G003690 vs. NCBI nr
Match: gi|743880248|ref|XP_011036151.1| (PREDICTED: protein TIFY 9-like [Populus euphratica])

HSP 1 Score: 102.4 bits (254), Expect = 9.9e-19
Identity = 79/210 (37.62%), Postives = 117/210 (55.71%), Query Frame = 1


Query: 1   MSIVELDFFAM--ENQSAASKSSLFRRQRSFKDIQSAISKINPAILKSLIVSGSA----- 60
           ++ VELDFFAM  EN+S+ SKS    RQRSF+DIQSAISKINP +LKS+I SGSA     
Sbjct: 4   VAAVELDFFAMGKENKSSPSKSKFLNRQRSFRDIQSAISKINPELLKSVIASGSAATKTT 63

Query: 61  -DHCSDFTIPIAISRKFPLPTPYRSANEDHNLSTVLPVYSASTSRHSSNPLLSPEIASDK 120
            ++ + F+     ++ F +P+   +  ++      LP+YS        N ++ PE A   
Sbjct: 64  PENGNQFS-----NKSFSVPS---TPKQEQPSFPALPLYSPLP---RPNMMIPPETA--- 123

Query: 121 YPLTIFYNETVAVFHVSRDEFKSILRFAETGSSASNGKGEAEKGKSMAEIPSNQHQRLVD 180
            PLTIFYN TVAVF+V RD+ ++IL+ AE G S ++        + M +  ++Q Q    
Sbjct: 124 -PLTIFYNGTVAVFNVPRDKAENILKLAEKGISKTS-------AEPMTDPKTDQQQLFES 183

Query: 181 VDPQDEGTSSIGKEKVTSEIFGEAQGEVTA 203
           +D    G   I + K       + +G +T+
Sbjct: 184 LD----GDLPIARRKSLQRFLEKRKGRLTS 187

The following BLAST results are available for this feature:

BLAST of Lsi07G003690 vs. Swiss-Prot


Match Name	E-value	Identity	Description
TIF9_ARATH	9.9e-11	39.46	Protein TIFY 9 OS=Arabidopsis thaliana GN=TIFY9 PE=1 SV=1	[more]

BLAST of Lsi07G003690 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KX64_CUCSA	2.4e-56	74.03	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G009880 PE=4 SV=1	[more]
B9GZA6_POPTR	2.4e-19	50.34	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0003s16350g PE=4 SV=2	[more]
D7U618_VITVI	2.0e-18	38.95	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0146g00480 PE=4 SV=...	[more]
A0A067JH87_JATCU	3.4e-18	41.84	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23114 PE=4 SV=1	[more]
B9GMR3_POPTR	9.9e-18	37.68	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s13240g PE=4 SV=1	[more]

BLAST of Lsi07G003690 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G13220.1	5.6e-12	39.46	jasmonate-zim-domain protein 10	[more]

BLAST of Lsi07G003690 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449468880\|ref\|XP_004152149.1\|	3.5e-56	74.03	PREDICTED: protein TIFY 9 [Cucumis sativus]	[more]
gi\|659108284\|ref\|XP_008454115.1\|	2.9e-55	72.83	PREDICTED: protein TIFY 9-like [Cucumis melo]	[more]
gi\|743819283\|ref\|XP_011020846.1\|	1.5e-19	51.03	PREDICTED: protein TIFY 9-like [Populus euphratica]	[more]
gi\|566163000\|ref\|XP_002304653.2\|	3.4e-19	50.34	hypothetical protein POPTR_0003s16350g [Populus trichocarpa]	[more]
gi\|743880248\|ref\|XP_011036151.1\|	9.9e-19	37.62	PREDICTED: protein TIFY 9-like [Populus euphratica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR010399	Tify_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0050789	regulation of biological process
biological_process	GO:0050896	response to stimulus
biological_process	GO:0001101	response to acid chemical
biological_process	GO:0009725	response to hormone
biological_process	GO:1901700	response to oxygen-containing compound
biological_process	GO:0007165	signal transduction
biological_process	GO:0008150	biological_process
biological_process	GO:0044763	single-organism cellular process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi07G003690.1	Lsi07G003690.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010399	Tify domain	PFAM	PF06200	tify	coord: 114..140 score: 3.
None	No IPR available	PANTHER	PTHR33077	FAMILY NOT NAMED	coord: 22..145 score: 5.9
None	No IPR available	PANTHER	PTHR33077:SF6	PROTEIN TIFY 9	coord: 22..145 score: 5.9

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi07G003690	Csa4G009880	Cucumber (Chinese Long) v2	culsiB312
Lsi07G003690	CSPI04G02540	Wild cucumber (PI 183967)	cpilsiB311
Lsi07G003690	Cucsa.095580	Cucumber (Gy14) v1	cgylsiB113
Lsi07G003690	CmaCh14G014130	Cucurbita maxima (Rimu)	cmalsiB256
Lsi07G003690	CmoCh14G014480	Cucurbita moschata (Rifu)	cmolsiB244
Lsi07G003690	MELO3C017797	Melon (DHL92) v3.5.1	lsimeB447
Lsi07G003690	ClCG07G011740	Watermelon (Charleston Gray)	lsiwcgB406
Lsi07G003690	MELO3C017797.2	Melon (DHL92) v3.6.1	lsimedB465
Lsi07G003690	Cla97C07G138470	Watermelon (97103) v2	lsiwmbB405
Lsi07G003690	Bhi01G002893	Wax gourd	lsiwgoB548
Lsi07G003690	Cp4.1LG03g13220	Cucurbita pepo (Zucchini)	cpelsiB516
Lsi07G003690	CsGy4G002410	Cucumber (Gy14) v2	cgyblsiB285
Lsi07G003690	Carg06564	Silver-seed gourd	carlsiB109
Lsi07G003690	CsaV3_4G002460	Cucumber (Chinese Long) v3	cuclsiB331

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi07G003690	Cucurbita maxima (Rimu)	cmalsiB773
Lsi07G003690	Cucurbita moschata (Rifu)	cmolsiB764
Lsi07G003690	Cucurbita pepo (Zucchini)	cpelsiB726
Lsi07G003690	Watermelon (97103) v1	lsiwmB438
Lsi07G003690	Silver-seed gourd	carlsiB635