Cp4.1LG03g13220 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGCCTTCAAATTGGAGTGTTGAGTCCATAAATAATCTTCGTATTCATCTTTCTCTCTCAGAGTTCGTTCCTCGAAATATGTCCATTGTTGAGTTGGATTTCTTCGCCATGGACAATCGATCCCTCAACTCCGACTCCGATCCCACTCTCTTCCGTCGCCATAGAAGCTTCAAAGGTTCCACAATTTCTTTATGCATTCTGTTTTTCATCCAATGTTTACAAATTACGCGATTTCTTGCTTTCAGATATTCAGGGCGCCATTTCCAAAATCAATCCTGAGATTCTCAAATCTCTCATCGCCTCTGGCTCTACAGAGCATAGTTCCGATTTCGCCACTCCGATTCCTCAGAAATTTCCGCCGCTGTCACTGCTCCGGACTCCTAATGTTGATCAGAATCTCTCCACGCCACCGCCTGTTTATTCCGCTACTACCTCCAGGCATTCTTCTAATCCTTCATTGTTCGGTTCTGTAATCGTGATTCGTTGTTTGATTTCTGAAACTCTACTTTTCTTTTGGTTGTAAAATCATGATTGTGGTTTCTGATTTTCAGGATGAGTCCAGAGATCGCTTCTGAAAAATATCCTCTCACGATTTTCTACAACGAAACCGTCTCCGTTTTTCACGTTTCGCGTGATGAGGTATCATTCGTTTAAACCATTTCCTCTTCCTTTCCATAATCATGTACGGATTTCAACCTAAAATATACGCTGCCTTTTACTGAAGGATGAAAAAAGTTAAAAAGGAAAAATAAATTAATTTATATTCATCAGCTTTAGAGTTCATTAATTAAAATTCAACCTCAAACTTTAAGAAATCAATGTAAAATTAAGAACTAAATCGATTTAGATCCATACAAATTATTAATTATCTAACACATATTTTAGACGTTTGAATTTGGTAAATAAAAACATTATATTCATATTTATGTCATTTTTATTTTTACAAAATATTTAGTGGATATTACTTTATTGGTTGTTGGGATAAGCATTCTATTTTATTCCACTAGTCGTTAAATTTATATTATATTGATTAAATTAAAGTTATTTTCCAATTTCATTCATGTTTTAAATCCCTTACTTTACTTGCACCTTTTGCAAAAGAATAATTTACTTGATATTTTATATTTGGCACGTTTTTTTAGTTTTTATATATACATAATTATAATTAGTTGCTATATATGGTCCTCTTTATTTATTCTATCCATCATTAATTATTTATTCTATCCATCATTATTTAGAATAGATAATTTATTGAGATTCTACTTTTTTTTTTTTTTTGTTATTAGTATTAGGTTAGACTTTGTTAATTTGAATATGATTTAATCCGTGATTGAGTTAGTGGTCAAAGAGATAATTTTTTTTATAGGTTTGATTTTTGTTCCATTTTTTATAATAAAAATTTATTCATTATATAACATGAAAATGAATTATTCAAGTGTGGTTTTGAATTTTATGTTTATTTTTACTGCAAAAGTTTTTAATAAATATTTATCGAAATTTATAATTTTGTTGAAAAAGAAATTATTCCTTGCAATTTATAATCATTTCCCTTCTCCTCGTTTTACTTTTCTTACCCATGTGTTTCACAAATAATAATAATAATTAAAATAAAATAAAATAAAAAAGTAAAACGAAAGGGGATTTGGCCTTTGTTACAGATTTGGGATGAACCCAGAACTGAGGATCGATTTATATCTGTGTGTATTATATATATTGAAAGAGGATATGCCTTTTGTGCTAGAAGACGCTGATGATCGATTGGGAAAGGCGCCATATGGTGCTGTCCCCGGTACGACGTCCCTTTAACTAAAACGAAGTTGTTGTAGGATGTTGCGTGGGGAAGACAAGCTGAGTTTGCCTCTTTTCCTCCCTGTAGTAGGCCTGCAATGAACCCACATGTTGGTCCTTCCATATCTGAAATGAAGGGAAACACTTTTTGTGCTTTGAAAAACATGATTAAGAGGGGAAGGAAACAAAAGGAACCATAAAAAAGGCCGCTGATGACTGGTGTCCGGTGTGTTGAGGATTGTCCTACGTTGGCTAATTTAGGGAATAATCATGAGTTGATAAGTGAAGAATGCTATCTCCATTGAAATGAGGTATTTTGGGGAAGAAGTCTAAAGCAATACCATGAGAGCTTATGCTCAAAGTGGAGAATATCATATAATTATGGAGAGCCGTAATTCCTAACGTGGAGGCGAGCGGCAGCGAATATCCACGGGCGACCATGCATGGAGAAAGAAGAGGAAGGAAAAAAAGAGGGATTTTAAAAAATAAAAGAATTCTTTTAGTAATTAAAATCTCAAATGATCAAAACTGTACTTTTTCCAATATTGTTTGATGAATCTCGTTTCCCTGTCTAACCATATATGCTATACTCGCACTTGTAGGCCAAAAACATTATGAGGTTTGCTGAAAAGGCGAGTGGCACTGGCAGTGGCATTGGAAAGGGTGAAGCCGAAAAGGGCCAACCAATGGCTGAAATTACTTCAAATCAGAACCAGCAACCGGTGCCCATTGATCCTGAAGATGATGAGGGTACGTATAGGATAAATAATTTTCTAGCAACGTGAAGTTAAAAATGAACAAAATTGGTCATTGATTTTTTTAGTTGAAAGTGTATATGTTTTAACTGTAACACAATTTTGGGAATATATTTATAATTGCTGTAAGCCCTAAACTATAGATAGCCCTTATTTCAATGTCTTCCAATAATTTCTCTTAAAAGACTGGTTAATTTGTTCTCAGATCTTCCATTGGCAAGGAAAAGGTCACTCCAGAGATTTTTGGAGAGGCGGAAGGAGAGGTAACGCCCCCAATGTTTATTTACTTAGACAGAATTTACTTGGTCTAATAGGTTTCTCTATTTATGTGTGATATGAACTAAATCAAATGGAAGTGCAACTAACCTGATTTGCTCGAAAACACTTCATTATTCTTTCAATATTTTGGATAAAACTGAATCCCTTGGCCTTCTTGAGTTAGCAACTATTAGGGATTGAACATTGAACATATTCATAATGTAAGATTTAATTTGAGAAGAGTGTGATAAAAGAGTAGTTATCAGCATGTCGATGAAATCTTTTAGCATTTGTTGATGAATTGGTAGTTTAAACATTTGATGCATCATCTAAGTTTAAGAAATGGATTTGAAGTGTGATTAAGATGCTTCAAATTAGCAATAACAAAAGGATTTGTATTTATGTTCAGTGGGGTTATGATTTATAGGTTAATTCCAACGGTGCCCTATGGTTGTCGCTCCTAATCAGGGAAGGGAAGGGAAGGTAAGACTGTCAAAAATAAATAGAGAATTGGGAAGTTTAGTGTTTATTCTGAATAAGTACAAAATTGTTTTGTACTGTTTGCTCTCTTTTCTAATGGGTTTTGTGTTAGGGTTAGGTGTTTATTGTTCCTTTTTCTTTCTTATCTTTATCCTTAGACTTTAGACTTTAGAGAATCAAAATTCTCTATTTGTTCCCTTAATTAATTACCTCACTTCTGCCTATTTTTTCCTACATTTTGTCTTTGAATCTGTCATCAATAAACGAGTATATCTAAATTAGTATATCCAGCAAAATTTATTTAGTATGATATTGTTTATTTT TGCCTTCAAATTGGAGTGTTGAGTCCATAAATAATCTTCGTATTCATCTTTCTCTCTCAGAGTTCGTTCCTCGAAATATGTCCATTGTTGAGTTGGATTTCTTCGCCATGGACAATCGATCCCTCAACTCCGACTCCGATCCCACTCTCTTCCGTCGCCATAGAAGCTTCAAAGATATTCAGGGCGCCATTTCCAAAATCAATCCTGAGATTCTCAAATCTCTCATCGCCTCTGGCTCTACAGAGCATAGTTCCGATTTCGCCACTCCGATTCCTCAGAAATTTCCGCCGCTGTCACTGCTCCGGACTCCTAATGTTGATCAGAATCTCTCCACGCCACCGCCTGTTTATTCCGCTACTACCTCCAGGCATTCTTCTAATCCTTCATTGATGAGTCCAGAGATCGCTTCTGAAAAATATCCTCTCACGATTTTCTACAACGAAACCGTCTCCGTTTTTCACGTTTCGCGTGATGAGGCCAAAAACATTATGAGGTTTGCTGAAAAGGCGAGTGGCACTGGCAGTGGCATTGGAAAGGGTGAAGCCGAAAAGGGCCAACCAATGGCTGAAATTACTTCAAATCAGAACCAGCAACCGGTGCCCATTGATCCTGAAGATGATGAGGATCTTCCATTGGCAAGGAAAAGGTCACTCCAGAGATTTTTGGAGAGGCGGAAGGAGAGGTTAATTCCAACGGTGCCCTATGGTTGTCGCTCCTAATCAGGGAAGGGAAGGGAAGGTAAGACTGTCAAAAATAAATAGAGAATTGGGAAGTTTAGTGTTTATTCTGAATAAGTACAAAATTGTTTTGTACTGTTTGCTCTCTTTTCTAATGGGTTTTGTGTTAGGGTTAGGTGTTTATTGTTCCTTTTTCTTTCTTATCTTTATCCTTAGACTTTAGACTTTAGAGAATCAAAATTCTCTATTTGTTCCCTTAATTAATTACCTCACTTCTGCCTATTTTTTCCTACATTTTGTCTTTGAATCTGTCATCAATAAACGAGTATATCTAAATTAGTATATCCAGCAAAATTTATTTAGTATGATATTGTTTATTTT ATGTCCATTGTTGAGTTGGATTTCTTCGCCATGGACAATCGATCCCTCAACTCCGACTCCGATCCCACTCTCTTCCGTCGCCATAGAAGCTTCAAAGATATTCAGGGCGCCATTTCCAAAATCAATCCTGAGATTCTCAAATCTCTCATCGCCTCTGGCTCTACAGAGCATAGTTCCGATTTCGCCACTCCGATTCCTCAGAAATTTCCGCCGCTGTCACTGCTCCGGACTCCTAATGTTGATCAGAATCTCTCCACGCCACCGCCTGTTTATTCCGCTACTACCTCCAGGCATTCTTCTAATCCTTCATTGATGAGTCCAGAGATCGCTTCTGAAAAATATCCTCTCACGATTTTCTACAACGAAACCGTCTCCGTTTTTCACGTTTCGCGTGATGAGGCCAAAAACATTATGAGGTTTGCTGAAAAGGCGAGTGGCACTGGCAGTGGCATTGGAAAGGGTGAAGCCGAAAAGGGCCAACCAATGGCTGAAATTACTTCAAATCAGAACCAGCAACCGGTGCCCATTGATCCTGAAGATGATGAGGATCTTCCATTGGCAAGGAAAAGGTCACTCCAGAGATTTTTGGAGAGGCGGAAGGAGAGGTTAATTCCAACGGTGCCCTATGGTTGTCGCTCCTAA MSIVELDFFAMDNRSLNSDSDPTLFRRHRSFKDIQGAISKINPEILKSLIASGSTEHSSDFATPIPQKFPPLSLLRTPNVDQNLSTPPPVYSATTSRHSSNPSLMSPEIASEKYPLTIFYNETVSVFHVSRDEAKNIMRFAEKASGTGSGIGKGEAEKGQPMAEITSNQNQQPVPIDPEDDEDLPLARKRSLQRFLERRKERLIPTVPYGCRS
BLAST of Cp4.1LG03g13220 vs. Swiss-Prot
Match: TIF9_ARATH (Protein TIFY 9 OS=Arabidopsis thaliana GN=TIFY9 PE=1 SV=1) HSP 1 Score: 115.9 bits (289), Expect = 5.3e-25 Identity = 84/210 (40.00%), Postives = 119/210 (56.67%), Query Frame = 1
BLAST of Cp4.1LG03g13220 vs. Swiss-Prot
Match: TIF9_ORYSJ (Protein TIFY 9 OS=Oryza sativa subsp. japonica GN=TIFY9 PE=1 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 7.7e-08 Identity = 64/218 (29.36%), Postives = 89/218 (40.83%), Query Frame = 1
BLAST of Cp4.1LG03g13220 vs. Swiss-Prot
Match: TIF9_ORYSI (Protein TIFY 9 OS=Oryza sativa subsp. indica GN=TIFY9 PE=3 SV=1) HSP 1 Score: 58.5 bits (140), Expect = 1.0e-07 Identity = 66/218 (30.28%), Postives = 91/218 (41.74%), Query Frame = 1
BLAST of Cp4.1LG03g13220 vs. Swiss-Prot
Match: TI10A_ARATH (Protein TIFY 10A OS=Arabidopsis thaliana GN=TIFY10A PE=1 SV=1) HSP 1 Score: 55.5 bits (132), Expect = 8.5e-07 Identity = 49/154 (31.82%), Postives = 74/154 (48.05%), Query Frame = 1
BLAST of Cp4.1LG03g13220 vs. Swiss-Prot
Match: TIF3B_ARATH (Protein TIFY 3B OS=Arabidopsis thaliana GN=TIFY3B PE=1 SV=1) HSP 1 Score: 52.4 bits (124), Expect = 7.2e-06 Identity = 40/106 (37.74%), Postives = 55/106 (51.89%), Query Frame = 1
BLAST of Cp4.1LG03g13220 vs. TrEMBL
Match: A0A0A0KX64_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G009880 PE=4 SV=1) HSP 1 Score: 224.6 bits (571), Expect = 1.2e-55 Identity = 133/214 (62.15%), Postives = 157/214 (73.36%), Query Frame = 1
BLAST of Cp4.1LG03g13220 vs. TrEMBL
Match: B9GMR3_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s13240g PE=4 SV=1) HSP 1 Score: 134.0 bits (336), Expect = 2.1e-28 Identity = 94/212 (44.34%), Postives = 122/212 (57.55%), Query Frame = 1
BLAST of Cp4.1LG03g13220 vs. TrEMBL
Match: B9GZA6_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0003s16350g PE=4 SV=2) HSP 1 Score: 133.7 bits (335), Expect = 2.7e-28 Identity = 92/208 (44.23%), Postives = 116/208 (55.77%), Query Frame = 1
BLAST of Cp4.1LG03g13220 vs. TrEMBL
Match: A0A067JH87_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23114 PE=4 SV=1) HSP 1 Score: 129.0 bits (323), Expect = 6.7e-27 Identity = 91/214 (42.52%), Postives = 114/214 (53.27%), Query Frame = 1
BLAST of Cp4.1LG03g13220 vs. TrEMBL
Match: A0A061E5T9_THECC (Jasmonate-zim-domain protein 10, putative OS=Theobroma cacao GN=TCM_008419 PE=4 SV=1) HSP 1 Score: 125.6 bits (314), Expect = 7.4e-26 Identity = 85/210 (40.48%), Postives = 117/210 (55.71%), Query Frame = 1
BLAST of Cp4.1LG03g13220 vs. TAIR10
Match: AT5G13220.1 (AT5G13220.1 jasmonate-zim-domain protein 10) HSP 1 Score: 115.9 bits (289), Expect = 3.0e-26 Identity = 84/210 (40.00%), Postives = 119/210 (56.67%), Query Frame = 1
BLAST of Cp4.1LG03g13220 vs. TAIR10
Match: AT1G19180.1 (AT1G19180.1 jasmonate-zim-domain protein 1) HSP 1 Score: 55.5 bits (132), Expect = 4.8e-08 Identity = 49/154 (31.82%), Postives = 74/154 (48.05%), Query Frame = 1
BLAST of Cp4.1LG03g13220 vs. TAIR10
Match: AT5G20900.1 (AT5G20900.1 jasmonate-zim-domain protein 12) HSP 1 Score: 52.4 bits (124), Expect = 4.1e-07 Identity = 40/106 (37.74%), Postives = 55/106 (51.89%), Query Frame = 1
BLAST of Cp4.1LG03g13220 vs. TAIR10
Match: AT1G74950.1 (AT1G74950.1 TIFY domain/Divergent CCT motif family protein) HSP 1 Score: 48.9 bits (115), Expect = 4.5e-06 Identity = 39/114 (34.21%), Postives = 54/114 (47.37%), Query Frame = 1
BLAST of Cp4.1LG03g13220 vs. NCBI nr
Match: gi|449468880|ref|XP_004152149.1| (PREDICTED: protein TIFY 9 [Cucumis sativus]) HSP 1 Score: 224.6 bits (571), Expect = 1.7e-55 Identity = 133/214 (62.15%), Postives = 157/214 (73.36%), Query Frame = 1
BLAST of Cp4.1LG03g13220 vs. NCBI nr
Match: gi|659108284|ref|XP_008454115.1| (PREDICTED: protein TIFY 9-like [Cucumis melo]) HSP 1 Score: 218.0 bits (554), Expect = 1.6e-53 Identity = 133/216 (61.57%), Postives = 156/216 (72.22%), Query Frame = 1
BLAST of Cp4.1LG03g13220 vs. NCBI nr
Match: gi|743880248|ref|XP_011036151.1| (PREDICTED: protein TIFY 9-like [Populus euphratica]) HSP 1 Score: 136.0 bits (341), Expect = 7.9e-29 Identity = 95/215 (44.19%), Postives = 125/215 (58.14%), Query Frame = 1
BLAST of Cp4.1LG03g13220 vs. NCBI nr
Match: gi|224053547|ref|XP_002297866.1| (hypothetical protein POPTR_0001s13240g [Populus trichocarpa]) HSP 1 Score: 134.0 bits (336), Expect = 3.0e-28 Identity = 94/212 (44.34%), Postives = 122/212 (57.55%), Query Frame = 1
BLAST of Cp4.1LG03g13220 vs. NCBI nr
Match: gi|566163000|ref|XP_002304653.2| (hypothetical protein POPTR_0003s16350g [Populus trichocarpa]) HSP 1 Score: 133.7 bits (335), Expect = 3.9e-28 Identity = 92/208 (44.23%), Postives = 116/208 (55.77%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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