Lsi07G002620 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi07G002620
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionGDP-mannose 4,6-dehydratase
Locationchr07 : 2855691 .. 2856806 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCATCCATCGCCGACGGTACCAGATCCGCCGCCGATACCAACGGCAAGGCCGCCGAACCGGCGGAGAAGCGCCGGACGGCCTTAATTACTGGCATTACTGGTCAGGATGGTTCATACCTTACTGAGTTCCTTCTCGAGAAGGGCTACGAAGTCCATGGATTGATCCGGCGATCTTCCAACTTCAACACTCAGCGAATCAATCACATCTACATCGACCCTCACAATGCTCATAAGGCACGAATGAAGCTTCACTATGCTGACCTCACCGACGCTTCCTCTCTCCGTCGATGGCTTGATATTATTCTCCCTGATGAGGTTTATAACCTCGCTGCTCAATCGCACGTTGCTGTTTCTTTCGAAATTCCGGATTATACTGCTGATGTTGTCGCCACTGGCGCTCTCCGTCTGCTTGAGGCGGTTCGATCTCATATCGCTGCTACTGGCCGTAGCCACATTCGGTATTACCAAGCGGGATCCTCTGAAATGTTTGGGTCCACGCCGCCGCCTCAGTCGGAGACGACTCCATTTCATCCTCGATCCCCTTACGCTGCAGCGAAATGTGCTGCGCATTGGTATACCGTTAATTACCGTGAGGCGTACGGGATCTTCGCTTGCAATGGGATTCTTTTCAATCACGAATCGCCGCGCAGGGGAGAGAATTTCGTGACGAGGAAGATCACACGGGCTGTCGGGCGCATCAAGATTGGGCTGCAGAGCAAGTTGTTTTTGGGGAATCTGCAGGCGTCGAGAGATTGGGGTTTTGCAGGGGACTACGTGGAAGCCATGTGGATGATGCTGCAGCAAGACCAACCCGATGATTACGTAGTTGCGACGGAGGAATCACACACGGTGGAGGAGTTTCTGGAGGTCGCATTTGGATATGTCGGATTGAATTGGAAAGACCATGTGGTGATCGACAAGAGATACTTCCGGCCGACGGAGGTTGATAATCTGAAGGGTGATGCAAGCAAGGTGAAGAAGGTATTGGGATGGAAACCAAAGGTTGGATTTGAGAAGCTGGTGAAGATGATGGTGGATGAAGACGTTGAAATAGCCAAGCGGGAGAAGGTGTTGGTTGACGCTGGCTATATGGATGCACAGCAGCAACCTTGA

mRNA sequence

ATGGCATCCATCGCCGACGGTACCAGATCCGCCGCCGATACCAACGGCAAGGCCGCCGAACCGGCGGAGAAGCGCCGGACGGCCTTAATTACTGGCATTACTGGTCAGGATGGTTCATACCTTACTGAGTTCCTTCTCGAGAAGGGCTACGAAGTCCATGGATTGATCCGGCGATCTTCCAACTTCAACACTCAGCGAATCAATCACATCTACATCGACCCTCACAATGCTCATAAGGCACGAATGAAGCTTCACTATGCTGACCTCACCGACGCTTCCTCTCTCCGTCGATGGCTTGATATTATTCTCCCTGATGAGGTTTATAACCTCGCTGCTCAATCGCACGTTGCTGTTTCTTTCGAAATTCCGGATTATACTGCTGATGTTGTCGCCACTGGCGCTCTCCGTCTGCTTGAGGCGGTTCGATCTCATATCGCTGCTACTGGCCGTAGCCACATTCGGTATTACCAAGCGGGATCCTCTGAAATGTTTGGGTCCACGCCGCCGCCTCAGTCGGAGACGACTCCATTTCATCCTCGATCCCCTTACGCTGCAGCGAAATGTGCTGCGCATTGGTATACCGTTAATTACCGTGAGGCGTACGGGATCTTCGCTTGCAATGGGATTCTTTTCAATCACGAATCGCCGCGCAGGGGAGAGAATTTCGTGACGAGGAAGATCACACGGGCTGTCGGGCGCATCAAGATTGGGCTGCAGAGCAAGTTGTTTTTGGGGAATCTGCAGGCGTCGAGAGATTGGGGTTTTGCAGGGGACTACGTGGAAGCCATGTGGATGATGCTGCAGCAAGACCAACCCGATGATTACGTAGTTGCGACGGAGGAATCACACACGGTGGAGGAGTTTCTGGAGGTCGCATTTGGATATGTCGGATTGAATTGGAAAGACCATGTGGTGATCGACAAGAGATACTTCCGGCCGACGGAGGTTGATAATCTGAAGGGTGATGCAAGCAAGGTGAAGAAGGTATTGGGATGGAAACCAAAGGTTGGATTTGAGAAGCTGGTGAAGATGATGGTGGATGAAGACGTTGAAATAGCCAAGCGGGAGAAGGTGTTGGTTGACGCTGGCTATATGGATGCACAGCAGCAACCTTGA

Coding sequence (CDS)

ATGGCATCCATCGCCGACGGTACCAGATCCGCCGCCGATACCAACGGCAAGGCCGCCGAACCGGCGGAGAAGCGCCGGACGGCCTTAATTACTGGCATTACTGGTCAGGATGGTTCATACCTTACTGAGTTCCTTCTCGAGAAGGGCTACGAAGTCCATGGATTGATCCGGCGATCTTCCAACTTCAACACTCAGCGAATCAATCACATCTACATCGACCCTCACAATGCTCATAAGGCACGAATGAAGCTTCACTATGCTGACCTCACCGACGCTTCCTCTCTCCGTCGATGGCTTGATATTATTCTCCCTGATGAGGTTTATAACCTCGCTGCTCAATCGCACGTTGCTGTTTCTTTCGAAATTCCGGATTATACTGCTGATGTTGTCGCCACTGGCGCTCTCCGTCTGCTTGAGGCGGTTCGATCTCATATCGCTGCTACTGGCCGTAGCCACATTCGGTATTACCAAGCGGGATCCTCTGAAATGTTTGGGTCCACGCCGCCGCCTCAGTCGGAGACGACTCCATTTCATCCTCGATCCCCTTACGCTGCAGCGAAATGTGCTGCGCATTGGTATACCGTTAATTACCGTGAGGCGTACGGGATCTTCGCTTGCAATGGGATTCTTTTCAATCACGAATCGCCGCGCAGGGGAGAGAATTTCGTGACGAGGAAGATCACACGGGCTGTCGGGCGCATCAAGATTGGGCTGCAGAGCAAGTTGTTTTTGGGGAATCTGCAGGCGTCGAGAGATTGGGGTTTTGCAGGGGACTACGTGGAAGCCATGTGGATGATGCTGCAGCAAGACCAACCCGATGATTACGTAGTTGCGACGGAGGAATCACACACGGTGGAGGAGTTTCTGGAGGTCGCATTTGGATATGTCGGATTGAATTGGAAAGACCATGTGGTGATCGACAAGAGATACTTCCGGCCGACGGAGGTTGATAATCTGAAGGGTGATGCAAGCAAGGTGAAGAAGGTATTGGGATGGAAACCAAAGGTTGGATTTGAGAAGCTGGTGAAGATGATGGTGGATGAAGACGTTGAAATAGCCAAGCGGGAGAAGGTGTTGGTTGACGCTGGCTATATGGATGCACAGCAGCAACCTTGA

Protein sequence

MASIADGTRSAADTNGKAAEPAEKRRTALITGITGQDGSYLTEFLLEKGYEVHGLIRRSSNFNTQRINHIYIDPHNAHKARMKLHYADLTDASSLRRWLDIILPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHIAATGRSHIRYYQAGSSEMFGSTPPPQSETTPFHPRSPYAAAKCAAHWYTVNYREAYGIFACNGILFNHESPRRGENFVTRKITRAVGRIKIGLQSKLFLGNLQASRDWGFAGDYVEAMWMMLQQDQPDDYVVATEESHTVEEFLEVAFGYVGLNWKDHVVIDKRYFRPTEVDNLKGDASKVKKVLGWKPKVGFEKLVKMMVDEDVEIAKREKVLVDAGYMDAQQQP
Homology
[Close]
BLAST of Lsi07G002620 vs. Swiss-Prot
Match: GMD1_ARATH (GDP-mannose 4,6 dehydratase 1 OS=Arabidopsis thaliana GN=GMD1 PE=1 SV=1)

HSP 1 Score: 643.7 bits (1659), Expect = 1.3e-183
Identity = 308/347 (88.76%), Postives = 334/347 (96.25%), Query Frame = 1 

Query: 25  RRTALITGITGQDGSYLTEFLLEKGYEVHGLIRRSSNFNTQRINHIYIDPHNAHKARMKL 84
           R+ AL+TGITGQDGSYLTEFLLEKGYEVHGLIRRSSNFNTQR+NHIY+DPHN +KA MKL
Sbjct: 16  RKIALVTGITGQDGSYLTEFLLEKGYEVHGLIRRSSNFNTQRLNHIYVDPHNVNKALMKL 75

Query: 85  HYADLTDASSLRRWLDIILPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSH 144
           HY DL+DASSLRRWLD+I PDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSH
Sbjct: 76  HYGDLSDASSLRRWLDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSH 135

Query: 145 IAATGRSHIRYYQAGSSEMFGSTPPPQSETTPFHPRSPYAAAKCAAHWYTVNYREAYGIF 204
               GR+ I+YYQAGSSEMFGSTPPPQSETTPFHPRSPYAA+KCAAHWYTVNYREAYG++
Sbjct: 136 NIDNGRA-IKYYQAGSSEMFGSTPPPQSETTPFHPRSPYAASKCAAHWYTVNYREAYGLY 195

Query: 205 ACNGILFNHESPRRGENFVTRKITRAVGRIKIGLQSKLFLGNLQASRDWGFAGDYVEAMW 264
           ACNGILFNHESPRRGENFVTRKITRA+GRIK+GLQ+KLFLGN+QASRDWGFAGDYVEAMW
Sbjct: 196 ACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNIQASRDWGFAGDYVEAMW 255

Query: 265 MMLQQDQPDDYVVATEESHTVEEFLEVAFGYVGLNWKDHVVIDKRYFRPTEVDNLKGDAS 324
           +MLQQ++PDDYVVATEESHTV+EFL+V+FGYVGLNWKDHV IDKRYFRPTEVDNLKGDAS
Sbjct: 256 LMLQQEKPDDYVVATEESHTVKEFLDVSFGYVGLNWKDHVEIDKRYFRPTEVDNLKGDAS 315

Query: 325 KVKKVLGWKPKVGFEKLVKMMVDEDVEIAKREKVLVDAGYMDAQQQP 372
           K K++LGWKPKVGFEKLVKMMVDED+E+AKREKVL DAGYMDAQQQP
Sbjct: 316 KAKEMLGWKPKVGFEKLVKMMVDEDLELAKREKVLADAGYMDAQQQP 361

[Close]
BLAST of Lsi07G002620 vs. Swiss-Prot
Match: GMD2_ARATH (GDP-mannose 4,6 dehydratase 2 OS=Arabidopsis thaliana GN=MUR1 PE=1 SV=3)

HSP 1 Score: 640.6 bits (1651), Expect = 1.1e-182
Identity = 317/374 (84.76%), Postives = 349/374 (93.32%), Query Frame = 1 

Query: 1   MASIADGTRSAAD--TNGKA-AEPAEKRRTALITGITGQDGSYLTEFLLEKGYEVHGLIR 60
           MAS  +G+RS ++  T  KA +   E R+ ALITGITGQDGSYLTEFLL KGYEVHGLIR
Sbjct: 1   MASENNGSRSDSESITAPKADSTVVEPRKIALITGITGQDGSYLTEFLLGKGYEVHGLIR 60

Query: 61  RSSNFNTQRINHIYIDPHNAHKARMKLHYADLTDASSLRRWLDIILPDEVYNLAAQSHVA 120
           RSSNFNTQRINHIYIDPHN +KA MKLHYADLTDASSLRRW+D+I PDEVYNLAAQSHVA
Sbjct: 61  RSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKPDEVYNLAAQSHVA 120

Query: 121 VSFEIPDYTADVVATGALRLLEAVRSHIAATGRSHIRYYQAGSSEMFGSTPPPQSETTPF 180
           VSFEIPDYTADVVATGALRLLEAVRSH   +GR+ ++YYQAGSSEMFGSTPPPQSETTPF
Sbjct: 121 VSFEIPDYTADVVATGALRLLEAVRSHTIDSGRT-VKYYQAGSSEMFGSTPPPQSETTPF 180

Query: 181 HPRSPYAAAKCAAHWYTVNYREAYGIFACNGILFNHESPRRGENFVTRKITRAVGRIKIG 240
           HPRSPYAA+KCAAHWYTVNYREAYG+FACNGILFNHESPRRGENFVTRKITRA+GRIK+G
Sbjct: 181 HPRSPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVG 240

Query: 241 LQSKLFLGNLQASRDWGFAGDYVEAMWMMLQQDQPDDYVVATEESHTVEEFLEVAFGYVG 300
           LQ+KLFLGNLQASRDWGFAGDYVEAMW+MLQQ++PDDYVVATEE HTVEEFL+V+FGY+G
Sbjct: 241 LQTKLFLGNLQASRDWGFAGDYVEAMWLMLQQEKPDDYVVATEEGHTVEEFLDVSFGYLG 300

Query: 301 LNWKDHVVIDKRYFRPTEVDNLKGDASKVKKVLGWKPKVGFEKLVKMMVDEDVEIAKREK 360
           LNWKD+V ID+RYFRP EVDNL+GDASK K+VLGWKP+VGFEKLVKMMVDED+E+AKREK
Sbjct: 301 LNWKDYVEIDQRYFRPAEVDNLQGDASKAKEVLGWKPQVGFEKLVKMMVDEDLELAKREK 360

Query: 361 VLVDAGYMDAQQQP 372
           VLVDAGYMDA+QQP
Sbjct: 361 VLVDAGYMDAKQQP 373

[Close]
BLAST of Lsi07G002620 vs. Swiss-Prot
Match: GMDS_MOUSE (GDP-mannose 4,6 dehydratase OS=Mus musculus GN=Gmds PE=1 SV=1)

HSP 1 Score: 384.4 bits (986), Expect = 1.4e-105
Identity = 192/353 (54.39%), Postives = 252/353 (71.39%), Query Frame = 1 

Query: 20  EPAEKRRTALITGITGQDGSYLTEFLLEKGYEVHGLIRRSSNFNTQRINHIYIDPHNAHK 79
           E  + R+ ALITGITGQDGSYL EFLLEKGYEVHG++RRSS+FNT RI H+Y +P    +
Sbjct: 18  EMGKLRKVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIE 77

Query: 80  ARMKLHYADLTDASSLRRWLDIILPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLE 139
             MKLHY DLTD++ L + ++ + P E+YNL AQSHV +SF++ +YTADV   G LRLL+
Sbjct: 78  GNMKLHYGDLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLD 137

Query: 140 AVRSHIAATGRSHIRYYQAGSSEMFGSTPP-PQSETTPFHPRSPYAAAKCAAHWYTVNYR 199
           A+++         +++YQA +SE++G     PQ ETTPF+PRSPY AAK  A+W  VN+R
Sbjct: 138 AIKTCGLINS---VKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVNFR 197

Query: 200 EAYGIFACNGILFNHESPRRGENFVTRKITRAVGRIKIGLQSKLFLGNLQASRDWGFAGD 259
           EAY +FA NGILFNHESPRRG NFVTRKI+R+V +I +G      LGNL A RDWG A D
Sbjct: 198 EAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKD 257

Query: 260 YVEAMWMMLQQDQPDDYVVATEESHTVEEFLEVAFGYVG--LNW---------------K 319
           YVEAMW+MLQ D+P+D+V+AT E H+V EF+E +F ++G  + W               K
Sbjct: 258 YVEAMWLMLQNDEPEDFVIATGEVHSVREFVEKSFMHIGKTIVWEGKNENEVGRCKETGK 317

Query: 320 DHVVIDKRYFRPTEVDNLKGDASKVKKVLGWKPKVGFEKLVKMMVDEDVEIAK 355
            HV +D +Y+RPTEVD L+GD SK ++ L WKP+V F++LV+ MV  DVE+ +
Sbjct: 318 VHVTVDLKYYRPTEVDFLQGDCSKAQQKLNWKPRVAFDELVREMVQADVELMR 367

[Close]
BLAST of Lsi07G002620 vs. Swiss-Prot
Match: GMDS_DROME (GDP-mannose 4,6 dehydratase OS=Drosophila melanogaster GN=Gmd PE=1 SV=2)

HSP 1 Score: 384.4 bits (986), Expect = 1.4e-105
Identity = 200/372 (53.76%), Postives = 258/372 (69.35%), Query Frame = 1 

Query: 8   TRSAADTNGK--AAEPAEKRRTALITGITGQDGSYLTEFLLEKGYEVHGLIRRSSNFNTQ 67
           +  + D NG    AE   + + ALITGITGQDGSYL EFLL+K YEVHG+IRR+S FNT 
Sbjct: 27  SNGSKDQNGTEAGAEGDSRDKVALITGITGQDGSYLAEFLLKKDYEVHGIIRRASTFNTT 86

Query: 68  RINHIYIDPHNAHKA-RMKLHYADLTDASSLRRWLDIILPDEVYNLAAQSHVAVSFEIPD 127
           RI H+Y DP  AHK  RMKLHY D+TD+SSL + ++++ P E+YNLAAQSHV VSF++ +
Sbjct: 87  RIEHLYADP-KAHKGGRMKLHYGDMTDSSSLVKIINMVKPTEIYNLAAQSHVKVSFDLSE 146

Query: 128 YTADVVATGALRLLEAVRSHIAATGRSHIRYYQAGSSEMFGST-PPPQSETTPFHPRSPY 187
           YTA+V A G LR+L+A+R+        ++R+YQA +SE++G     PQ+E TPF+PRSPY
Sbjct: 147 YTAEVDAVGTLRILDAIRT---CGMEKNVRFYQASTSELYGKVVETPQNEQTPFYPRSPY 206

Query: 188 AAAKCAAHWYTVNYREAYGIFACNGILFNHESPRRGENFVTRKITRAVGRIKIGLQSKLF 247
           A AK    W  +NYREAY ++ACNGILFNHESPRRGENFVTRKITR+V +I         
Sbjct: 207 ACAKMYGFWIVINYREAYNMYACNGILFNHESPRRGENFVTRKITRSVAKIYHKQMEYFE 266

Query: 248 LGNLQASRDWGFAGDYVEAMWMMLQQDQPDDYVVATEESHTVEEFLEVAFGYVG--LNWK 307
           LGNL + RDWG A DYVEAMWMMLQ++ P DYV+AT E+H+V EF+E AF ++   + WK
Sbjct: 267 LGNLDSKRDWGHASDYVEAMWMMLQRESPSDYVIATGETHSVREFVEAAFKHIDREITWK 326

Query: 308 D---------------HVVIDKRYFRPTEVDNLKGDASKVKKVLGWKPKVGFEKLVKMMV 359
                            V I+ +YFRPTEVD L+GDASK  + L W PKV F +LV  M+
Sbjct: 327 GKGVDEVGVENGTGIVRVRINPKYFRPTEVDLLQGDASKANRELNWTPKVTFVELVSDMM 386

[Close]
BLAST of Lsi07G002620 vs. Swiss-Prot
Match: GMDS_CRIGR (GDP-mannose 4,6 dehydratase OS=Cricetulus griseus GN=GMDS PE=2 SV=1)

HSP 1 Score: 384.0 bits (985), Expect = 1.8e-105
Identity = 192/358 (53.63%), Postives = 253/358 (70.67%), Query Frame = 1 

Query: 15  NGKAAEPAEKRRTALITGITGQDGSYLTEFLLEKGYEVHGLIRRSSNFNTQRINHIYIDP 74
           N    +  + R+ ALITGITGQDGSYL EFLLEKGYEVHG++RRSS+FNT RI H+Y +P
Sbjct: 13  NSGDGDKGKPRKVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNP 72

Query: 75  HNAHKARMKLHYADLTDASSLRRWLDIILPDEVYNLAAQSHVAVSFEIPDYTADVVATGA 134
               +  MKLHY DLTD++ L + ++ + P E+YNL AQSHV +SF++ +YTADV   G 
Sbjct: 73  QAHIEGNMKLHYGDLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGT 132

Query: 135 LRLLEAVRSHIAATGRSHIRYYQAGSSEMFGSTPP-PQSETTPFHPRSPYAAAKCAAHWY 194
           LRLL+A+++         +++YQA +SE++G     PQ ETTPF+PRSPY AAK  A+W 
Sbjct: 133 LRLLDAIKTCGLINS---VKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWI 192

Query: 195 TVNYREAYGIFACNGILFNHESPRRGENFVTRKITRAVGRIKIGLQSKLFLGNLQASRDW 254
            VN+REAY +FA NGILFNHESPRRG NFVTRKI+R+V +I +G      LGNL A RDW
Sbjct: 193 VVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDW 252

Query: 255 GFAGDYVEAMWMMLQQDQPDDYVVATEESHTVEEFLEVAFGYVG--LNW----------- 314
           G A DYVEAMW+MLQ D+P+D+V+AT E H+V EF+E +F ++G  + W           
Sbjct: 253 GHAKDYVEAMWLMLQNDEPEDFVIATGEVHSVREFVEKSFMHIGKTIVWEGKNENEVGRC 312

Query: 315 ----KDHVVIDKRYFRPTEVDNLKGDASKVKKVLGWKPKVGFEKLVKMMVDEDVEIAK 355
               K HV +D +Y+RPTEVD L+GD SK ++ L WKP+V F++LV+ MV  DVE+ +
Sbjct: 313 KETGKIHVTVDLKYYRPTEVDFLQGDCSKAQQKLNWKPRVAFDELVREMVQADVELMR 367

[Close]
BLAST of Lsi07G002620 vs. TrEMBL
Match: A0A0A0KY32_CUCSA (GDP-mannose 4,6-dehydratase OS=Cucumis sativus GN=Csa_4G046810 PE=3 SV=1)

HSP 1 Score: 735.7 bits (1898), Expect = 2.7e-209
Identity = 364/371 (98.11%), Postives = 369/371 (99.46%), Query Frame = 1 

Query: 1   MASIADGTRSAADTNGKAAEPAEKRRTALITGITGQDGSYLTEFLLEKGYEVHGLIRRSS 60
           MASIADGTRS +DTNGKAAEPAEKRRTALITGITGQDGSYLTEFLL+KGYEVHGLIRRSS
Sbjct: 1   MASIADGTRSTSDTNGKAAEPAEKRRTALITGITGQDGSYLTEFLLDKGYEVHGLIRRSS 60

Query: 61  NFNTQRINHIYIDPHNAHKARMKLHYADLTDASSLRRWLDIILPDEVYNLAAQSHVAVSF 120
           NFNTQRINHIYIDPHNA+KARMKLHYADLTDASSLRRWLDIILPDEVYNLAAQSHVAVSF
Sbjct: 61  NFNTQRINHIYIDPHNANKARMKLHYADLTDASSLRRWLDIILPDEVYNLAAQSHVAVSF 120

Query: 121 EIPDYTADVVATGALRLLEAVRSHIAATGRSHIRYYQAGSSEMFGSTPPPQSETTPFHPR 180
           EIPDYTADVVATGALRLLEAVRSHIAATGRSHIRYYQAGSSEMFGSTPPPQSETTPFHPR
Sbjct: 121 EIPDYTADVVATGALRLLEAVRSHIAATGRSHIRYYQAGSSEMFGSTPPPQSETTPFHPR 180

Query: 181 SPYAAAKCAAHWYTVNYREAYGIFACNGILFNHESPRRGENFVTRKITRAVGRIKIGLQS 240
           SPYAAAKCAAHWYTVNYREAYGIFACNGILFNHESPRRGENFVTRKITRAVGRIKIGLQS
Sbjct: 181 SPYAAAKCAAHWYTVNYREAYGIFACNGILFNHESPRRGENFVTRKITRAVGRIKIGLQS 240

Query: 241 KLFLGNLQASRDWGFAGDYVEAMWMMLQQDQPDDYVVATEESHTVEEFLEVAFGYVGLNW 300
           KLFLGNLQASRDWGFAGDYVEAMWMMLQQDQPDDYVVATEESHTV+EFLEVAFGYVGLNW
Sbjct: 241 KLFLGNLQASRDWGFAGDYVEAMWMMLQQDQPDDYVVATEESHTVKEFLEVAFGYVGLNW 300

Query: 301 KDHVVIDKRYFRPTEVDNLKGDASKVKKVLGWKPKVGFEKLVKMMVDEDVEIAKREKVLV 360
           KDHVVIDKRYFRP EVDNLKGDASKVK+VLGWKPKVGFEKLVKMMVDEDVEIAKREKVLV
Sbjct: 301 KDHVVIDKRYFRPAEVDNLKGDASKVKRVLGWKPKVGFEKLVKMMVDEDVEIAKREKVLV 360

Query: 361 DAGYMDAQQQP 372
           DAGYMDAQQQP
Sbjct: 361 DAGYMDAQQQP 371

[Close]
BLAST of Lsi07G002620 vs. TrEMBL
Match: A0A059AI89_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J02407 PE=3 SV=1)

HSP 1 Score: 691.8 bits (1784), Expect = 4.5e-196
Identity = 336/371 (90.57%), Postives = 354/371 (95.42%), Query Frame = 1 

Query: 1   MASIADGTRSAADTNGKAAEPAEKRRTALITGITGQDGSYLTEFLLEKGYEVHGLIRRSS 60
           MA+  D  +S +  NG+A  P ++R+ ALITGITGQDGSYLTE LL+KGYEVHGLIRRSS
Sbjct: 1   MATHDDAPKSGSGANGEAPPPPQQRKVALITGITGQDGSYLTELLLDKGYEVHGLIRRSS 60

Query: 61  NFNTQRINHIYIDPHNAHKARMKLHYADLTDASSLRRWLDIILPDEVYNLAAQSHVAVSF 120
           NFNTQRINHIYIDPHNAHKARMKLHYADLTDASSLRRW+D I PDEVYNLAAQSHVAVSF
Sbjct: 61  NFNTQRINHIYIDPHNAHKARMKLHYADLTDASSLRRWIDTIAPDEVYNLAAQSHVAVSF 120

Query: 121 EIPDYTADVVATGALRLLEAVRSHIAATGRSHIRYYQAGSSEMFGSTPPPQSETTPFHPR 180
           EIPDYTADVVATGALRLLEAVRSH++ATGRSHIRYYQAGSSEMFGSTPPPQSETTPFHPR
Sbjct: 121 EIPDYTADVVATGALRLLEAVRSHVSATGRSHIRYYQAGSSEMFGSTPPPQSETTPFHPR 180

Query: 181 SPYAAAKCAAHWYTVNYREAYGIFACNGILFNHESPRRGENFVTRKITRAVGRIKIGLQS 240
           SPYAA+KCAAHWYTVNYREAYG+FACNGILFNHESPRRGENFVTRKITRAVGRIKIGLQS
Sbjct: 181 SPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRAVGRIKIGLQS 240

Query: 241 KLFLGNLQASRDWGFAGDYVEAMWMMLQQDQPDDYVVATEESHTVEEFLEVAFGYVGLNW 300
           KLFLGNLQASRDWGFAGDYVEAMWMMLQQ++PDDYVVATEESHTVEEFLEVAFGYVGLNW
Sbjct: 241 KLFLGNLQASRDWGFAGDYVEAMWMMLQQEKPDDYVVATEESHTVEEFLEVAFGYVGLNW 300

Query: 301 KDHVVIDKRYFRPTEVDNLKGDASKVKKVLGWKPKVGFEKLVKMMVDEDVEIAKREKVLV 360
           +DHVVIDKRYFRP EVDNLKGDASK KKVLGWKP VGFEKLVKMMVDED+E+AKREKVLV
Sbjct: 301 RDHVVIDKRYFRPAEVDNLKGDASKAKKVLGWKPNVGFEKLVKMMVDEDIELAKREKVLV 360

Query: 361 DAGYMDAQQQP 372
           DAGYMDAQQQP
Sbjct: 361 DAGYMDAQQQP 371

[Close]
BLAST of Lsi07G002620 vs. TrEMBL
Match: A0A067LE53_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06504 PE=3 SV=1)

HSP 1 Score: 683.7 bits (1763), Expect = 1.2e-193
Identity = 338/373 (90.62%), Postives = 350/373 (93.83%), Query Frame = 1 

Query: 1   MASIADGTRSAADTNG--KAAEPAEKRRTALITGITGQDGSYLTEFLLEKGYEVHGLIRR 60
           MA+       +A  NG   AA P +K + ALITGITGQDGSYLTEFLL KGYEVHGLIRR
Sbjct: 1   MATKDTAGSGSATVNGDASAATPPQKHKIALITGITGQDGSYLTEFLLNKGYEVHGLIRR 60

Query: 61  SSNFNTQRINHIYIDPHNAHKARMKLHYADLTDASSLRRWLDIILPDEVYNLAAQSHVAV 120
           SSNFNTQRINHIYIDPHNAHKARMKLHYADLTDASSLRRWLD ILPDEVYNLAAQSHVAV
Sbjct: 61  SSNFNTQRINHIYIDPHNAHKARMKLHYADLTDASSLRRWLDTILPDEVYNLAAQSHVAV 120

Query: 121 SFEIPDYTADVVATGALRLLEAVRSHIAATGRSHIRYYQAGSSEMFGSTPPPQSETTPFH 180
           SFEIPDYTADVVATGALRLLEAVRSHIAATGRSHIRYYQAGSSEMFGSTPPPQSETTPFH
Sbjct: 121 SFEIPDYTADVVATGALRLLEAVRSHIAATGRSHIRYYQAGSSEMFGSTPPPQSETTPFH 180

Query: 181 PRSPYAAAKCAAHWYTVNYREAYGIFACNGILFNHESPRRGENFVTRKITRAVGRIKIGL 240
           PRSPYAA+KCAAHWYTVNYREAYG+FACNGILFNHESPRRGENFVTRKITRAVGRIK GL
Sbjct: 181 PRSPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRAVGRIKTGL 240

Query: 241 QSKLFLGNLQASRDWGFAGDYVEAMWMMLQQDQPDDYVVATEESHTVEEFLEVAFGYVGL 300
           Q+KLFLGNL ASRDWGFAGDYVEAMWMMLQQ+ PDDYVVATEESHTVEEFLEVAFGYVGL
Sbjct: 241 QNKLFLGNLSASRDWGFAGDYVEAMWMMLQQEMPDDYVVATEESHTVEEFLEVAFGYVGL 300

Query: 301 NWKDHVVIDKRYFRPTEVDNLKGDASKVKKVLGWKPKVGFEKLVKMMVDEDVEIAKREKV 360
           NWKDHVVIDKRYFRP EVDNLKGD+SK +KVLGWKPKVGFE+LVKMMVDED+EIAKREKV
Sbjct: 301 NWKDHVVIDKRYFRPAEVDNLKGDSSKTRKVLGWKPKVGFEQLVKMMVDEDIEIAKREKV 360

Query: 361 LVDAGYMDAQQQP 372
           LVDAGYMDAQQQP
Sbjct: 361 LVDAGYMDAQQQP 373

[Close]
BLAST of Lsi07G002620 vs. TrEMBL
Match: B7XH28_NICBE (GDP-mannose 4,6-dehydratase OS=Nicotiana benthamiana GN=GMD PE=2 SV=2)

HSP 1 Score: 682.9 bits (1761), Expect = 2.1e-193
Identity = 332/361 (91.97%), Postives = 349/361 (96.68%), Query Frame = 1 

Query: 11  AADTNGKAAEPAEKRRTALITGITGQDGSYLTEFLLEKGYEVHGLIRRSSNFNTQRINHI 70
           AAD+NG      ++R+ AL+TGITGQDGSYLTEFLL+KGYEVHGLIRRSSNFNT R+NHI
Sbjct: 13  AADSNG------DRRKVALVTGITGQDGSYLTEFLLDKGYEVHGLIRRSSNFNTHRVNHI 72

Query: 71  YIDPHNAHKARMKLHYADLTDASSLRRWLDIILPDEVYNLAAQSHVAVSFEIPDYTADVV 130
           YIDPHNAHKARMKLHYAD+TDASSLRRWLD ILPDEVYNLAAQSHVAVSFEIPDYTADVV
Sbjct: 73  YIDPHNAHKARMKLHYADVTDASSLRRWLDTILPDEVYNLAAQSHVAVSFEIPDYTADVV 132

Query: 131 ATGALRLLEAVRSHIAATGRSHIRYYQAGSSEMFGSTPPPQSETTPFHPRSPYAAAKCAA 190
           ATGALRLLEAVRSHI+ATGRSHIRYYQAGSSEMFGSTPPPQSE TPFHPRSPYA +KCAA
Sbjct: 133 ATGALRLLEAVRSHISATGRSHIRYYQAGSSEMFGSTPPPQSEATPFHPRSPYAVSKCAA 192

Query: 191 HWYTVNYREAYGIFACNGILFNHESPRRGENFVTRKITRAVGRIKIGLQSKLFLGNLQAS 250
           HWYTVNYREAYGIFACNGILFNHESPRRGENFVTRKITRAVGRIKIGLQSKLFLGNLQAS
Sbjct: 193 HWYTVNYREAYGIFACNGILFNHESPRRGENFVTRKITRAVGRIKIGLQSKLFLGNLQAS 252

Query: 251 RDWGFAGDYVEAMWMMLQQDQPDDYVVATEESHTVEEFLEVAFGYVGLNWKDHVVIDKRY 310
           RDWGFAGDYVEAMWMMLQQ++PDDYVVATEESHTVEEFLEVAFGYVGLNWKDHVVIDKRY
Sbjct: 253 RDWGFAGDYVEAMWMMLQQEKPDDYVVATEESHTVEEFLEVAFGYVGLNWKDHVVIDKRY 312

Query: 311 FRPTEVDNLKGDASKVKKVLGWKPKVGFEKLVKMMVDEDVEIAKREKVLVDAGYMDAQQQ 370
           FRPTEVDNLKGD+SK +KVLGWKP+VGFE+LVKMMVDEDVE+AKREKVLVDAGYMDAQQQ
Sbjct: 313 FRPTEVDNLKGDSSKARKVLGWKPRVGFEQLVKMMVDEDVELAKREKVLVDAGYMDAQQQ 367

Query: 371 P 372
           P
Sbjct: 373 P 367

[Close]
BLAST of Lsi07G002620 vs. TrEMBL
Match: V4UHF1_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10025903mg PE=3 SV=1)

HSP 1 Score: 682.2 bits (1759), Expect = 3.6e-193
Identity = 337/371 (90.84%), Postives = 352/371 (94.88%), Query Frame = 1 

Query: 1   MASIADGTRSAADTNGKAAEPAEKRRTALITGITGQDGSYLTEFLLEKGYEVHGLIRRSS 60
           MAS  + +RS +  NG A     KR+ ALITGITGQDGSYLTEFLL KGYEVHGLIRRSS
Sbjct: 1   MASENESSRSESTINGDATP---KRKIALITGITGQDGSYLTEFLLNKGYEVHGLIRRSS 60

Query: 61  NFNTQRINHIYIDPHNAHKARMKLHYADLTDASSLRRWLDIILPDEVYNLAAQSHVAVSF 120
           NFNTQRINHIYIDPHNAHKARMKLHYADLTDASSLRRWLD ILPDEVYNLAAQSHVAVSF
Sbjct: 61  NFNTQRINHIYIDPHNAHKARMKLHYADLTDASSLRRWLDTILPDEVYNLAAQSHVAVSF 120

Query: 121 EIPDYTADVVATGALRLLEAVRSHIAATGRSHIRYYQAGSSEMFGSTPPPQSETTPFHPR 180
           EIPDYTADVVATGALRLLEAVRSHIA +GRSHIRYYQAGSSEMFGSTPPPQSETTPFHPR
Sbjct: 121 EIPDYTADVVATGALRLLEAVRSHIADSGRSHIRYYQAGSSEMFGSTPPPQSETTPFHPR 180

Query: 181 SPYAAAKCAAHWYTVNYREAYGIFACNGILFNHESPRRGENFVTRKITRAVGRIKIGLQS 240
           SPYAA+KCAAHWYTVNYREAYG+FACNGILFNHESPRRGENFVTRKITRAVGRIKIGLQS
Sbjct: 181 SPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRAVGRIKIGLQS 240

Query: 241 KLFLGNLQASRDWGFAGDYVEAMWMMLQQDQPDDYVVATEESHTVEEFLEVAFGYVGLNW 300
           KLFLGNLQASRDWGFAGDYVEAMWMMLQQ++PDDYVVATEESHTVEEFLEVAFGYV LNW
Sbjct: 241 KLFLGNLQASRDWGFAGDYVEAMWMMLQQEKPDDYVVATEESHTVEEFLEVAFGYVRLNW 300

Query: 301 KDHVVIDKRYFRPTEVDNLKGDASKVKKVLGWKPKVGFEKLVKMMVDEDVEIAKREKVLV 360
           KDHVVIDKRYFRP EVDNLKGD+SK +KVLGWKP+VGFE+LVKMMVDED+E+AKREKVLV
Sbjct: 301 KDHVVIDKRYFRPAEVDNLKGDSSKARKVLGWKPRVGFEQLVKMMVDEDIELAKREKVLV 360

Query: 361 DAGYMDAQQQP 372
           DAGYMDAQQQP
Sbjct: 361 DAGYMDAQQQP 368

[Close]
BLAST of Lsi07G002620 vs. TAIR10
Match: AT5G66280.1 (AT5G66280.1 GDP-D-mannose 4,6-dehydratase 1)

HSP 1 Score: 643.7 bits (1659), Expect = 7.2e-185
Identity = 308/347 (88.76%), Postives = 334/347 (96.25%), Query Frame = 1 

Query: 25  RRTALITGITGQDGSYLTEFLLEKGYEVHGLIRRSSNFNTQRINHIYIDPHNAHKARMKL 84
           R+ AL+TGITGQDGSYLTEFLLEKGYEVHGLIRRSSNFNTQR+NHIY+DPHN +KA MKL
Sbjct: 16  RKIALVTGITGQDGSYLTEFLLEKGYEVHGLIRRSSNFNTQRLNHIYVDPHNVNKALMKL 75

Query: 85  HYADLTDASSLRRWLDIILPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSH 144
           HY DL+DASSLRRWLD+I PDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSH
Sbjct: 76  HYGDLSDASSLRRWLDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSH 135

Query: 145 IAATGRSHIRYYQAGSSEMFGSTPPPQSETTPFHPRSPYAAAKCAAHWYTVNYREAYGIF 204
               GR+ I+YYQAGSSEMFGSTPPPQSETTPFHPRSPYAA+KCAAHWYTVNYREAYG++
Sbjct: 136 NIDNGRA-IKYYQAGSSEMFGSTPPPQSETTPFHPRSPYAASKCAAHWYTVNYREAYGLY 195

Query: 205 ACNGILFNHESPRRGENFVTRKITRAVGRIKIGLQSKLFLGNLQASRDWGFAGDYVEAMW 264
           ACNGILFNHESPRRGENFVTRKITRA+GRIK+GLQ+KLFLGN+QASRDWGFAGDYVEAMW
Sbjct: 196 ACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNIQASRDWGFAGDYVEAMW 255

Query: 265 MMLQQDQPDDYVVATEESHTVEEFLEVAFGYVGLNWKDHVVIDKRYFRPTEVDNLKGDAS 324
           +MLQQ++PDDYVVATEESHTV+EFL+V+FGYVGLNWKDHV IDKRYFRPTEVDNLKGDAS
Sbjct: 256 LMLQQEKPDDYVVATEESHTVKEFLDVSFGYVGLNWKDHVEIDKRYFRPTEVDNLKGDAS 315

Query: 325 KVKKVLGWKPKVGFEKLVKMMVDEDVEIAKREKVLVDAGYMDAQQQP 372
           K K++LGWKPKVGFEKLVKMMVDED+E+AKREKVL DAGYMDAQQQP
Sbjct: 316 KAKEMLGWKPKVGFEKLVKMMVDEDLELAKREKVLADAGYMDAQQQP 361

[Close]
BLAST of Lsi07G002620 vs. TAIR10
Match: AT3G51160.1 (AT3G51160.1 NAD(P)-binding Rossmann-fold superfamily protein)

HSP 1 Score: 640.6 bits (1651), Expect = 6.1e-184
Identity = 317/374 (84.76%), Postives = 349/374 (93.32%), Query Frame = 1 

Query: 1   MASIADGTRSAAD--TNGKA-AEPAEKRRTALITGITGQDGSYLTEFLLEKGYEVHGLIR 60
           MAS  +G+RS ++  T  KA +   E R+ ALITGITGQDGSYLTEFLL KGYEVHGLIR
Sbjct: 1   MASENNGSRSDSESITAPKADSTVVEPRKIALITGITGQDGSYLTEFLLGKGYEVHGLIR 60

Query: 61  RSSNFNTQRINHIYIDPHNAHKARMKLHYADLTDASSLRRWLDIILPDEVYNLAAQSHVA 120
           RSSNFNTQRINHIYIDPHN +KA MKLHYADLTDASSLRRW+D+I PDEVYNLAAQSHVA
Sbjct: 61  RSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKPDEVYNLAAQSHVA 120

Query: 121 VSFEIPDYTADVVATGALRLLEAVRSHIAATGRSHIRYYQAGSSEMFGSTPPPQSETTPF 180
           VSFEIPDYTADVVATGALRLLEAVRSH   +GR+ ++YYQAGSSEMFGSTPPPQSETTPF
Sbjct: 121 VSFEIPDYTADVVATGALRLLEAVRSHTIDSGRT-VKYYQAGSSEMFGSTPPPQSETTPF 180

Query: 181 HPRSPYAAAKCAAHWYTVNYREAYGIFACNGILFNHESPRRGENFVTRKITRAVGRIKIG 240
           HPRSPYAA+KCAAHWYTVNYREAYG+FACNGILFNHESPRRGENFVTRKITRA+GRIK+G
Sbjct: 181 HPRSPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVG 240

Query: 241 LQSKLFLGNLQASRDWGFAGDYVEAMWMMLQQDQPDDYVVATEESHTVEEFLEVAFGYVG 300
           LQ+KLFLGNLQASRDWGFAGDYVEAMW+MLQQ++PDDYVVATEE HTVEEFL+V+FGY+G
Sbjct: 241 LQTKLFLGNLQASRDWGFAGDYVEAMWLMLQQEKPDDYVVATEEGHTVEEFLDVSFGYLG 300

Query: 301 LNWKDHVVIDKRYFRPTEVDNLKGDASKVKKVLGWKPKVGFEKLVKMMVDEDVEIAKREK 360
           LNWKD+V ID+RYFRP EVDNL+GDASK K+VLGWKP+VGFEKLVKMMVDED+E+AKREK
Sbjct: 301 LNWKDYVEIDQRYFRPAEVDNLQGDASKAKEVLGWKPQVGFEKLVKMMVDEDLELAKREK 360

Query: 361 VLVDAGYMDAQQQP 372
           VLVDAGYMDA+QQP
Sbjct: 361 VLVDAGYMDAKQQP 373

[Close]
BLAST of Lsi07G002620 vs. TAIR10
Match: AT2G47650.2 (AT2G47650.2 UDP-xylose synthase 4)

HSP 1 Score: 56.6 bits (135), Expect = 3.7e-08
Identity = 81/339 (23.89%), Postives = 136/339 (40.12%), Query Frame = 1 

Query: 29  LITGITGQDGSYLTEFLLEKGYEVHGLIRRSSNFNTQRINHIYIDPHNAHKARMKLHYAD 88
           ++TG  G  GS+L + L+ +G  V  +     NF T R  ++    H+ +    ++   D
Sbjct: 124 VVTGGAGFVGSHLVDRLMARGDNVIVV----DNFFTGRKENVM---HHFNNPNFEMIRHD 183

Query: 89  LTDASSLRRWLDIILPDEVYNLAAQ-SHVAVSFEIPDYTADVVATGALRLLEAVRSHIAA 148
           + +   L         D++Y+LA   S V   F  P  T      G L +L   +     
Sbjct: 184 VVEPILLE-------VDQIYHLACPASPVHYKFN-PVKTIKTNVVGTLNMLGLAK----- 243

Query: 149 TGRSHIRYYQAGSSEMFGST-PPPQSET-----TPFHPRSPYAAAKCAAHWYTVNYREAY 208
             R   R+    +SE++G     PQ ET      P   RS Y   K  A   T++Y    
Sbjct: 244 --RVGARFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGA 303

Query: 209 GIFACNGILFNHESPRRG-------ENFVTRKITRAVGRIKIGLQSKLFLGNLQASRDWG 268
            +      +FN   PR          NFV + + +         +     G+ + +R + 
Sbjct: 304 NVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRK---------EPLTVYGDGKQTRSFQ 363

Query: 269 FAGDYVEAMWMMLQQDQPDDYVVATEESHTVEEFLEVAFGYVGLNWKDHVVID--KRYFR 328
           F  D VE +  +++ +    + +      T+   LE+A   VG       +    K  FR
Sbjct: 364 FVSDLVEGLMRLMEGEHVGPFNLGNPGEFTM---LELAKWMVGEQVVQETIDPNAKIEFR 423

Query: 329 PTEVDN---LKGDASKVKKVLGWKPKVGFEKLVKMMVDE 349
           P   D+    K D +K K++LGW+PKV   + + +MV +
Sbjct: 424 PNTEDDPHKRKPDITKAKELLGWEPKVALRQGLPLMVKD 428

[Close]
BLAST of Lsi07G002620 vs. TAIR10
Match: AT3G62830.1 (AT3G62830.1 NAD(P)-binding Rossmann-fold superfamily protein)

HSP 1 Score: 54.3 bits (129), Expect = 1.9e-07
Identity = 78/337 (23.15%), Postives = 132/337 (39.17%), Query Frame = 1 

Query: 29  LITGITGQDGSYLTEFLLEKGYEVHGLIRRSSNFNTQRINHIYIDPHNAHKARMKLHYAD 88
           ++TG  G  GS+L + L+ +G  V  +     NF T R  ++    H+      ++   D
Sbjct: 122 VVTGGAGFVGSHLVDRLMARGDTVIVV----DNFFTGRKENVM---HHFSNPNFEMIRHD 181

Query: 89  LTDASSLRRWLDIILPDEVYNLAAQ-SHVAVSFEIPDYTADVVATGALRLLEAVRSHIAA 148
           + +   L         D++Y+LA   S V   F  P  T      G L +L   +     
Sbjct: 182 VVEPILLE-------VDQIYHLACPASPVHYKFN-PVKTIKTNVVGTLNMLGLAK----- 241

Query: 149 TGRSHIRYYQAGSSEMFGST-PPPQSET-----TPFHPRSPYAAAKCAAHWYTVNYREAY 208
             R   R+    +SE++G     PQ ET      P   RS Y   K  A   T++Y    
Sbjct: 242 --RVGARFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGA 301

Query: 209 GIFACNGILFNHESPRRG-------ENFVTRKITRAVGRIKIGLQSKLFLGNLQASRDWG 268
            +      +FN   PR          NFV + + +         +     G+ + +R + 
Sbjct: 302 NVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRK---------EPLTVYGDGKQTRSFQ 361

Query: 269 FAGDYVEAMWMMLQQDQPDDYVVATEESHTVEEFLEVAFGYVGLNWKDHVVIDKRYFRPT 328
           F  D VE +  +++ +    + +      T+ E  +V    +  N           FRP 
Sbjct: 362 FVSDLVEGLMRLMEGEHVGPFNLGNPGEFTMLELAKVVQETIDPNANIE-------FRPN 420

Query: 329 EVDN---LKGDASKVKKVLGWKPKVGFEKLVKMMVDE 349
             D+    K D +K K++LGW+PKV   + + +MV +
Sbjct: 422 TEDDPHKRKPDITKAKELLGWEPKVSLRQGLPLMVKD 420

[Close]
BLAST of Lsi07G002620 vs. TAIR10
Match: AT2G28760.2 (AT2G28760.2 UDP-XYL synthase 6)

HSP 1 Score: 52.8 bits (125), Expect = 5.4e-07
Identity = 79/334 (23.65%), Postives = 128/334 (38.32%), Query Frame = 1 

Query: 29  LITGITGQDGSYLTEFLLEKGYEVHGLIRRSSNFNTQRINHIYIDPHNAHKARMKLHYAD 88
           L+TG  G  GS+L + L++   E + +I   + F   + N      H     R +L   D
Sbjct: 34  LVTGGAGFIGSHLVDKLMQN--EKNEVIVADNYFTGSKDNLKKWIGH----PRFELIRHD 93

Query: 89  LTDASSLRRWLDIILPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHIAAT 148
           +T+          +  D++Y+LA  +        P  T      G L +L   +      
Sbjct: 94  VTEPL-------FVEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAK------ 153

Query: 149 GRSHIRYYQAGSSEMFGST-PPPQSET-----TPFHPRSPYAAAKCAAHWYTVNYREAYG 208
            R   R     +SE++G     PQ+E+      P   RS Y   K  A     +Y   +G
Sbjct: 154 -RVGARILLTSTSEVYGDPLVHPQTESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHG 213

Query: 209 IFACNGILFNHESPRRG-------ENFVTRKIT-RAVGRIKIGLQSKLFLGNLQASRDWG 268
           I      +FN   PR          NF+ + +   A+   K G Q++ F           
Sbjct: 214 IEIRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEALTVQKPGTQTRSFC---------- 273

Query: 269 FAGDYVEAMWMMLQQDQPDDYVVATEESHTVEEFLEVAFGYVGLNWKDHVVIDKRYFRPT 328
           +  D VE +  +++ DQ     +      T+ E  E     +    K  V I      P 
Sbjct: 274 YVSDMVEGLMRLMEGDQTGPINIGNPGEFTMVELAETVKELI----KPDVEIKMVENTPD 333

Query: 329 EVDNLKGDASKVKKVLGWKPKVGFEKLVKMMVDE 349
           +    K D SK K+VLGW+PKV   + + +M ++
Sbjct: 334 DPRQRKPDISKAKEVLGWEPKVKLREGLPLMEED 333

[Close]
BLAST of Lsi07G002620 vs. NCBI nr
Match: gi|659102322|ref|XP_008452068.1| (PREDICTED: GDP-mannose 4,6 dehydratase 1 [Cucumis melo])

HSP 1 Score: 737.3 bits (1902), Expect = 1.4e-209
Identity = 365/371 (98.38%), Postives = 369/371 (99.46%), Query Frame = 1 

Query: 1   MASIADGTRSAADTNGKAAEPAEKRRTALITGITGQDGSYLTEFLLEKGYEVHGLIRRSS 60
           MASIADGTRS +DTNGKAAEPAEKRRTALITGITGQDGSYLTEFLL+KGYEVHGLIRRSS
Sbjct: 1   MASIADGTRSTSDTNGKAAEPAEKRRTALITGITGQDGSYLTEFLLDKGYEVHGLIRRSS 60

Query: 61  NFNTQRINHIYIDPHNAHKARMKLHYADLTDASSLRRWLDIILPDEVYNLAAQSHVAVSF 120
           NFNTQRINHIYIDPHNA+KARMKLHYADLTDASSLRRWLDIILPDEVYNLAAQSHVAVSF
Sbjct: 61  NFNTQRINHIYIDPHNANKARMKLHYADLTDASSLRRWLDIILPDEVYNLAAQSHVAVSF 120

Query: 121 EIPDYTADVVATGALRLLEAVRSHIAATGRSHIRYYQAGSSEMFGSTPPPQSETTPFHPR 180
           EIPDYTADVVATGALRLLEAVRSHIAATGRSHIRYYQAGSSEMFGSTPPPQSETTPFHPR
Sbjct: 121 EIPDYTADVVATGALRLLEAVRSHIAATGRSHIRYYQAGSSEMFGSTPPPQSETTPFHPR 180

Query: 181 SPYAAAKCAAHWYTVNYREAYGIFACNGILFNHESPRRGENFVTRKITRAVGRIKIGLQS 240
           SPYAAAKCAAHWYTVNYREAYGIFACNGILFNHESPRRGENFVTRKITRAVGRIKIGLQS
Sbjct: 181 SPYAAAKCAAHWYTVNYREAYGIFACNGILFNHESPRRGENFVTRKITRAVGRIKIGLQS 240

Query: 241 KLFLGNLQASRDWGFAGDYVEAMWMMLQQDQPDDYVVATEESHTVEEFLEVAFGYVGLNW 300
           KLFLGNLQASRDWGFAGDYVEAMWMMLQQDQPDDYVVATEESHTVEEFLEVAFGYVGLNW
Sbjct: 241 KLFLGNLQASRDWGFAGDYVEAMWMMLQQDQPDDYVVATEESHTVEEFLEVAFGYVGLNW 300

Query: 301 KDHVVIDKRYFRPTEVDNLKGDASKVKKVLGWKPKVGFEKLVKMMVDEDVEIAKREKVLV 360
           KDHVVIDKRYFRP EVDNLKGDASKVK+VLGWKPKVGFEKLVKMMVDEDVEIAKREKVLV
Sbjct: 301 KDHVVIDKRYFRPAEVDNLKGDASKVKRVLGWKPKVGFEKLVKMMVDEDVEIAKREKVLV 360

Query: 361 DAGYMDAQQQP 372
           DAGYMDAQQQP
Sbjct: 361 DAGYMDAQQQP 371

[Close]
BLAST of Lsi07G002620 vs. NCBI nr
Match: gi|778690764|ref|XP_011653164.1| (PREDICTED: GDP-mannose 4,6 dehydratase 1 [Cucumis sativus])

HSP 1 Score: 735.7 bits (1898), Expect = 3.9e-209
Identity = 364/371 (98.11%), Postives = 369/371 (99.46%), Query Frame = 1 

Query: 1   MASIADGTRSAADTNGKAAEPAEKRRTALITGITGQDGSYLTEFLLEKGYEVHGLIRRSS 60
           MASIADGTRS +DTNGKAAEPAEKRRTALITGITGQDGSYLTEFLL+KGYEVHGLIRRSS
Sbjct: 1   MASIADGTRSTSDTNGKAAEPAEKRRTALITGITGQDGSYLTEFLLDKGYEVHGLIRRSS 60

Query: 61  NFNTQRINHIYIDPHNAHKARMKLHYADLTDASSLRRWLDIILPDEVYNLAAQSHVAVSF 120
           NFNTQRINHIYIDPHNA+KARMKLHYADLTDASSLRRWLDIILPDEVYNLAAQSHVAVSF
Sbjct: 61  NFNTQRINHIYIDPHNANKARMKLHYADLTDASSLRRWLDIILPDEVYNLAAQSHVAVSF 120

Query: 121 EIPDYTADVVATGALRLLEAVRSHIAATGRSHIRYYQAGSSEMFGSTPPPQSETTPFHPR 180
           EIPDYTADVVATGALRLLEAVRSHIAATGRSHIRYYQAGSSEMFGSTPPPQSETTPFHPR
Sbjct: 121 EIPDYTADVVATGALRLLEAVRSHIAATGRSHIRYYQAGSSEMFGSTPPPQSETTPFHPR 180

Query: 181 SPYAAAKCAAHWYTVNYREAYGIFACNGILFNHESPRRGENFVTRKITRAVGRIKIGLQS 240
           SPYAAAKCAAHWYTVNYREAYGIFACNGILFNHESPRRGENFVTRKITRAVGRIKIGLQS
Sbjct: 181 SPYAAAKCAAHWYTVNYREAYGIFACNGILFNHESPRRGENFVTRKITRAVGRIKIGLQS 240

Query: 241 KLFLGNLQASRDWGFAGDYVEAMWMMLQQDQPDDYVVATEESHTVEEFLEVAFGYVGLNW 300
           KLFLGNLQASRDWGFAGDYVEAMWMMLQQDQPDDYVVATEESHTV+EFLEVAFGYVGLNW
Sbjct: 241 KLFLGNLQASRDWGFAGDYVEAMWMMLQQDQPDDYVVATEESHTVKEFLEVAFGYVGLNW 300

Query: 301 KDHVVIDKRYFRPTEVDNLKGDASKVKKVLGWKPKVGFEKLVKMMVDEDVEIAKREKVLV 360
           KDHVVIDKRYFRP EVDNLKGDASKVK+VLGWKPKVGFEKLVKMMVDEDVEIAKREKVLV
Sbjct: 301 KDHVVIDKRYFRPAEVDNLKGDASKVKRVLGWKPKVGFEKLVKMMVDEDVEIAKREKVLV 360

Query: 361 DAGYMDAQQQP 372
           DAGYMDAQQQP
Sbjct: 361 DAGYMDAQQQP 371

[Close]
BLAST of Lsi07G002620 vs. NCBI nr
Match: gi|702482235|ref|XP_010033470.1| (PREDICTED: GDP-mannose 4,6 dehydratase 1 [Eucalyptus grandis])

HSP 1 Score: 691.8 bits (1784), Expect = 6.5e-196
Identity = 336/371 (90.57%), Postives = 354/371 (95.42%), Query Frame = 1 

Query: 1   MASIADGTRSAADTNGKAAEPAEKRRTALITGITGQDGSYLTEFLLEKGYEVHGLIRRSS 60
           MA+  D  +S +  NG+A  P ++R+ ALITGITGQDGSYLTE LL+KGYEVHGLIRRSS
Sbjct: 1   MATHDDAPKSGSGANGEAPPPPQQRKVALITGITGQDGSYLTELLLDKGYEVHGLIRRSS 60

Query: 61  NFNTQRINHIYIDPHNAHKARMKLHYADLTDASSLRRWLDIILPDEVYNLAAQSHVAVSF 120
           NFNTQRINHIYIDPHNAHKARMKLHYADLTDASSLRRW+D I PDEVYNLAAQSHVAVSF
Sbjct: 61  NFNTQRINHIYIDPHNAHKARMKLHYADLTDASSLRRWIDTIAPDEVYNLAAQSHVAVSF 120

Query: 121 EIPDYTADVVATGALRLLEAVRSHIAATGRSHIRYYQAGSSEMFGSTPPPQSETTPFHPR 180
           EIPDYTADVVATGALRLLEAVRSH++ATGRSHIRYYQAGSSEMFGSTPPPQSETTPFHPR
Sbjct: 121 EIPDYTADVVATGALRLLEAVRSHVSATGRSHIRYYQAGSSEMFGSTPPPQSETTPFHPR 180

Query: 181 SPYAAAKCAAHWYTVNYREAYGIFACNGILFNHESPRRGENFVTRKITRAVGRIKIGLQS 240
           SPYAA+KCAAHWYTVNYREAYG+FACNGILFNHESPRRGENFVTRKITRAVGRIKIGLQS
Sbjct: 181 SPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRAVGRIKIGLQS 240

Query: 241 KLFLGNLQASRDWGFAGDYVEAMWMMLQQDQPDDYVVATEESHTVEEFLEVAFGYVGLNW 300
           KLFLGNLQASRDWGFAGDYVEAMWMMLQQ++PDDYVVATEESHTVEEFLEVAFGYVGLNW
Sbjct: 241 KLFLGNLQASRDWGFAGDYVEAMWMMLQQEKPDDYVVATEESHTVEEFLEVAFGYVGLNW 300

Query: 301 KDHVVIDKRYFRPTEVDNLKGDASKVKKVLGWKPKVGFEKLVKMMVDEDVEIAKREKVLV 360
           +DHVVIDKRYFRP EVDNLKGDASK KKVLGWKP VGFEKLVKMMVDED+E+AKREKVLV
Sbjct: 301 RDHVVIDKRYFRPAEVDNLKGDASKAKKVLGWKPNVGFEKLVKMMVDEDIELAKREKVLV 360

Query: 361 DAGYMDAQQQP 372
           DAGYMDAQQQP
Sbjct: 361 DAGYMDAQQQP 371

[Close]
BLAST of Lsi07G002620 vs. NCBI nr
Match: gi|568825102|ref|XP_006466926.1| (PREDICTED: GDP-mannose 4,6 dehydratase 1 [Citrus sinensis])

HSP 1 Score: 684.5 bits (1765), Expect = 1.0e-193
Identity = 338/371 (91.11%), Postives = 353/371 (95.15%), Query Frame = 1 

Query: 1   MASIADGTRSAADTNGKAAEPAEKRRTALITGITGQDGSYLTEFLLEKGYEVHGLIRRSS 60
           MAS  + +RS +  NG A     KR+ ALITGITGQDGSYLTEFLL KGYEVHGLIRRSS
Sbjct: 1   MASENESSRSESIINGDATP---KRKIALITGITGQDGSYLTEFLLNKGYEVHGLIRRSS 60

Query: 61  NFNTQRINHIYIDPHNAHKARMKLHYADLTDASSLRRWLDIILPDEVYNLAAQSHVAVSF 120
           NFNTQRINHIYIDPHNAHKARMKLHYADLTDASSLRRWLD ILPDEVYNLAAQSHVAVSF
Sbjct: 61  NFNTQRINHIYIDPHNAHKARMKLHYADLTDASSLRRWLDTILPDEVYNLAAQSHVAVSF 120

Query: 121 EIPDYTADVVATGALRLLEAVRSHIAATGRSHIRYYQAGSSEMFGSTPPPQSETTPFHPR 180
           EIPDYTADVVATGALRLLEAVRSHIA +GRSHIRYYQAGSSEMFGSTPPPQSETTPFHPR
Sbjct: 121 EIPDYTADVVATGALRLLEAVRSHIADSGRSHIRYYQAGSSEMFGSTPPPQSETTPFHPR 180

Query: 181 SPYAAAKCAAHWYTVNYREAYGIFACNGILFNHESPRRGENFVTRKITRAVGRIKIGLQS 240
           SPYAA+KCAAHWYTVNYREAYG+FACNGILFNHESPRRGENFVTRKITRAVGRIKIGLQS
Sbjct: 181 SPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRAVGRIKIGLQS 240

Query: 241 KLFLGNLQASRDWGFAGDYVEAMWMMLQQDQPDDYVVATEESHTVEEFLEVAFGYVGLNW 300
           KLFLGNLQASRDWGFAGDYVEAMWMMLQQ++PDDYVVATEESHTVEEFLEVAFGYVGLNW
Sbjct: 241 KLFLGNLQASRDWGFAGDYVEAMWMMLQQEKPDDYVVATEESHTVEEFLEVAFGYVGLNW 300

Query: 301 KDHVVIDKRYFRPTEVDNLKGDASKVKKVLGWKPKVGFEKLVKMMVDEDVEIAKREKVLV 360
           KDHVVIDKRYFRP EVDNLKGD+SK +KVLGWKP+VGFE+LVKMMVDED+E+AKREKVLV
Sbjct: 301 KDHVVIDKRYFRPAEVDNLKGDSSKARKVLGWKPRVGFEQLVKMMVDEDIELAKREKVLV 360

Query: 361 DAGYMDAQQQP 372
           DAGYMDAQQQP
Sbjct: 361 DAGYMDAQQQP 368

[Close]
BLAST of Lsi07G002620 vs. NCBI nr
Match: gi|697160254|ref|XP_009588908.1| (PREDICTED: GDP-mannose 4,6 dehydratase 1 [Nicotiana tomentosiformis])

HSP 1 Score: 684.1 bits (1764), Expect = 1.4e-193
Identity = 334/361 (92.52%), Postives = 349/361 (96.68%), Query Frame = 1 

Query: 11  AADTNGKAAEPAEKRRTALITGITGQDGSYLTEFLLEKGYEVHGLIRRSSNFNTQRINHI 70
           AAD+NG       +R+ ALITGITGQDGSYLTEFLL+KGYEVHGLIRRSSNFNTQR+NHI
Sbjct: 13  AADSNGV------RRKVALITGITGQDGSYLTEFLLDKGYEVHGLIRRSSNFNTQRVNHI 72

Query: 71  YIDPHNAHKARMKLHYADLTDASSLRRWLDIILPDEVYNLAAQSHVAVSFEIPDYTADVV 130
           YIDPHN HKARMKLHYAD+TDASSLRRWLD ILPDEVYNLAAQSHVAVSFEIPDYTADVV
Sbjct: 73  YIDPHNVHKARMKLHYADVTDASSLRRWLDTILPDEVYNLAAQSHVAVSFEIPDYTADVV 132

Query: 131 ATGALRLLEAVRSHIAATGRSHIRYYQAGSSEMFGSTPPPQSETTPFHPRSPYAAAKCAA 190
           ATGALRLLEAVRSHI+ATGRSHIRYYQAGSSEMFGSTPPPQSETTPFHPRSPYA +KCAA
Sbjct: 133 ATGALRLLEAVRSHISATGRSHIRYYQAGSSEMFGSTPPPQSETTPFHPRSPYAVSKCAA 192

Query: 191 HWYTVNYREAYGIFACNGILFNHESPRRGENFVTRKITRAVGRIKIGLQSKLFLGNLQAS 250
           HWYTVNYREAYGIFACNGILFNHESPRRGENFVTRKITRAVGRIKIGLQSKLFLGNLQAS
Sbjct: 193 HWYTVNYREAYGIFACNGILFNHESPRRGENFVTRKITRAVGRIKIGLQSKLFLGNLQAS 252

Query: 251 RDWGFAGDYVEAMWMMLQQDQPDDYVVATEESHTVEEFLEVAFGYVGLNWKDHVVIDKRY 310
           RDWGFAGDYVEAMWMMLQQ++PDDYVVATEESHTVEEFLEVAFGYVGLNWKDHVVIDKRY
Sbjct: 253 RDWGFAGDYVEAMWMMLQQEKPDDYVVATEESHTVEEFLEVAFGYVGLNWKDHVVIDKRY 312

Query: 311 FRPTEVDNLKGDASKVKKVLGWKPKVGFEKLVKMMVDEDVEIAKREKVLVDAGYMDAQQQ 370
           FRPTEVDNLKGD+SK +KVLGWKP+VGFE+LVKMMVDEDVE+AKREKVLVDAGYMDAQQQ
Sbjct: 313 FRPTEVDNLKGDSSKARKVLGWKPRVGFEQLVKMMVDEDVELAKREKVLVDAGYMDAQQQ 367

Query: 371 P 372
           P
Sbjct: 373 P 367

The following BLAST results are available for this feature:
BLAST of Lsi07G002620 vs. Swiss-Prot
Match NameE-valueIdentityDescription
GMD1_ARATH1.3e-18388.76GDP-mannose 4,6 dehydratase 1 OS=Arabidopsis thaliana GN=GMD1 PE=1 SV=1[more]
GMD2_ARATH1.1e-18284.76GDP-mannose 4,6 dehydratase 2 OS=Arabidopsis thaliana GN=MUR1 PE=1 SV=3[more]
GMDS_MOUSE1.4e-10554.39GDP-mannose 4,6 dehydratase OS=Mus musculus GN=Gmds PE=1 SV=1[more]
GMDS_DROME1.4e-10553.76GDP-mannose 4,6 dehydratase OS=Drosophila melanogaster GN=Gmd PE=1 SV=2[more]
GMDS_CRIGR1.8e-10553.63GDP-mannose 4,6 dehydratase OS=Cricetulus griseus GN=GMDS PE=2 SV=1[more]
BLAST of Lsi07G002620 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KY32_CUCSA2.7e-20998.11GDP-mannose 4,6-dehydratase OS=Cucumis sativus GN=Csa_4G046810 PE=3 SV=1[more]
A0A059AI89_EUCGR4.5e-19690.57Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J02407 PE=3 SV=1[more]
A0A067LE53_JATCU1.2e-19390.62Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06504 PE=3 SV=1[more]
B7XH28_NICBE2.1e-19391.97GDP-mannose 4,6-dehydratase OS=Nicotiana benthamiana GN=GMD PE=2 SV=2[more]
V4UHF1_9ROSI3.6e-19390.84Uncharacterized protein OS=Citrus clementina GN=CICLE_v10025903mg PE=3 SV=1[more]
BLAST of Lsi07G002620 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G66280.17.2e-18588.76 GDP-D-mannose 4,6-dehydratase 1[more]
AT3G51160.16.1e-18484.76 NAD(P)-binding Rossmann-fold superfamily protein[more]
AT2G47650.23.7e-0823.89 UDP-xylose synthase 4[more]
AT3G62830.11.9e-0723.15 NAD(P)-binding Rossmann-fold superfamily protein[more]
AT2G28760.25.4e-0723.65 UDP-XYL synthase 6[more]
BLAST of Lsi07G002620 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659102322|ref|XP_008452068.1|1.4e-20998.38PREDICTED: GDP-mannose 4,6 dehydratase 1 [Cucumis melo][more]
gi|778690764|ref|XP_011653164.1|3.9e-20998.11PREDICTED: GDP-mannose 4,6 dehydratase 1 [Cucumis sativus][more]
gi|702482235|ref|XP_010033470.1|6.5e-19690.57PREDICTED: GDP-mannose 4,6 dehydratase 1 [Eucalyptus grandis][more]
gi|568825102|ref|XP_006466926.1|1.0e-19391.11PREDICTED: GDP-mannose 4,6 dehydratase 1 [Citrus sinensis][more]
gi|697160254|ref|XP_009588908.1|1.4e-19392.52PREDICTED: GDP-mannose 4,6 dehydratase 1 [Nicotiana tomentosiformis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0019673GDP-mannose metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0008446GDP-mannose 4,6-dehydratase activity
Vocabulary: INTERPRO
TermDefinition
IPR016040NAD(P)-bd_dom
IPR006368GDP_Man_deHydtase
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006000 fructose metabolic process
biological_process GO:0006012 galactose metabolic process
biological_process GO:0009298 GDP-mannose biosynthetic process
biological_process GO:0019673 GDP-mannose metabolic process
cellular_component GO:0005575 cellular_component
molecular_function GO:0050662 coenzyme binding
molecular_function GO:0008446 GDP-mannose 4,6-dehydratase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi07G002620.1Lsi07G002620.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006368GDP-mannose 4,6-dehydrataseHAMAPMF_00955GDP_Man_dehydratasecoord: 26..355
score: 56
IPR006368GDP-mannose 4,6-dehydrataseTIGRFAMsTIGR01472TIGR01472coord: 27..352
score: 1.0E
IPR016040NAD(P)-binding domainGENE3DG3DSA:3.40.50.720coord: 27..226
score: 9.3
IPR016040NAD(P)-binding domainPFAMPF16363GDP_Man_Dehydcoord: 29..345
score: 6.9E
IPR016040NAD(P)-binding domainunknownSSF51735NAD(P)-binding Rossmann-fold domainscoord: 26..351
score: 8.89
NoneNo IPR availableGENE3DG3DSA:3.90.25.10coord: 227..360
score: 2.1
NoneNo IPR availablePANTHERPTHR10366NAD DEPENDENT EPIMERASE/DEHYDRATASEcoord: 27..371
score: 9.5E
NoneNo IPR availablePANTHERPTHR10366:SF346GDP-MANNOSE 4,6 DEHYDRATASE 1-RELATEDcoord: 27..371
score: 9.5E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Lsi07G002620Csa4G046810Cucumber (Chinese Long) v2culsiB303
Lsi07G002620CSPI04G05580Wild cucumber (PI 183967)cpilsiB303
Lsi07G002620Cucsa.106600Cucumber (Gy14) v1cgylsiB140
Lsi07G002620CmaCh16G006110Cucurbita maxima (Rimu)cmalsiB326
Lsi07G002620CmaCh04G007510Cucurbita maxima (Rimu)cmalsiB698
Lsi07G002620CmoCh04G008000Cucurbita moschata (Rifu)cmolsiB692
Lsi07G002620CmoCh16G006670Cucurbita moschata (Rifu)cmolsiB315
Lsi07G002620Cla014592Watermelon (97103) v1lsiwmB439
Lsi07G002620MELO3C016378Melon (DHL92) v3.5.1lsimeB454
Lsi07G002620ClCG07G008430Watermelon (Charleston Gray)lsiwcgB413
Lsi07G002620MELO3C032603.2Melon (DHL92) v3.6.1lsimedB471
Lsi07G002620Cla97C07G135500Watermelon (97103) v2lsiwmbB412
Lsi07G002620Bhi01G001843Wax gourdlsiwgoB550
Lsi07G002620Cp4.1LG01g06730Cucurbita pepo (Zucchini)cpelsiB373
Lsi07G002620Cp4.1LG14g01840Cucurbita pepo (Zucchini)cpelsiB185
Lsi07G002620CsGy4G005460Cucumber (Gy14) v2cgyblsiB277
Lsi07G002620Carg14149Silver-seed gourdcarlsiB859
Lsi07G002620Carg05734Silver-seed gourdcarlsiB935
Lsi07G002620CsaV3_4G005740Cucumber (Chinese Long) v3cuclsiB322
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi07G002620Wax gourdlsiwgoB555
Lsi07G002620Bottle gourd (USVL1VR-Ls)lsilsiB082
Lsi07G002620Cucumber (Gy14) v1cgylsiB444
Lsi07G002620Cucumber (Gy14) v1cgylsiB557
Lsi07G002620Cucurbita maxima (Rimu)cmalsiB329
Lsi07G002620Cucurbita maxima (Rimu)cmalsiB618
Lsi07G002620Cucurbita moschata (Rifu)cmolsiB606
Lsi07G002620Wild cucumber (PI 183967)cpilsiB305
Lsi07G002620Wild cucumber (PI 183967)cpilsiB477
Lsi07G002620Cucumber (Chinese Long) v2culsiB305
Lsi07G002620Cucumber (Chinese Long) v2culsiB469
Lsi07G002620Melon (DHL92) v3.5.1lsimeB456
Lsi07G002620Melon (DHL92) v3.5.1lsimeB460
Lsi07G002620Watermelon (Charleston Gray)lsiwcgB414
Lsi07G002620Watermelon (Charleston Gray)lsiwcgB396
Lsi07G002620Watermelon (Charleston Gray)lsiwcgB402
Lsi07G002620Watermelon (97103) v1lsiwmB448
Lsi07G002620Watermelon (97103) v1lsiwmB451
Lsi07G002620Watermelon (97103) v1lsiwmB455
Lsi07G002620Cucumber (Gy14) v2cgyblsiB435
Lsi07G002620Melon (DHL92) v3.6.1lsimedB478
Lsi07G002620Silver-seed gourdcarlsiB369
Lsi07G002620Cucumber (Chinese Long) v3cuclsiB499
Lsi07G002620Watermelon (97103) v2lsiwmbB393