Cp4.1LG01g06730 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG01g06730
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionGDP-mannose 4,6-dehydratase
LocationCp4.1LG01 : 4038136 .. 4039251 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCATCCATCGCCGACGGTACCAGATCCGCCTCCAATACCAATGTCGAGGGCACTGCCCCGACGGAGAAGCGCCGGACGGCCTTAATTACCGGCATTACTGGCCAGGATGGTTCCTATCTGACTGAGTTCCTTCTCGACAAGGGCTACGAAGTCCATGGATTGATCCGGCGATCTTCCAACTTTAATACTCAGAGAATCAACCACATCTATATCGATCCTCACAATGTTCACAAGGCGCGAATGAAGCTTCACTACGCTGACCTCACTGACGCCTCCTCTCTTCGCCGATGGCTCGATACTATCCTTCCCGATGAGGTCTATAACCTCGCTGCTCAATCGCACGTTGCTGTTTCTTTTGAAATTCCGGATTATACCGCTGACGTTGTCGCCACTGGTGCCCTCCGTTTGCTTGAGGCGGTTCGATCTCATATCGCTGCCACTGGCCGGAGTCACATTCGATACTATCAAGCGGGATCGTCTGAAATGTTCGGGTCCACGCCGCCGCCTCAGTTGGAGACGACTCCATTTCATCCTCGATCTCCCTACGCCGCAGCGAAATGCGCTGCGCATTGGTATACGGTGAATTACCGTGAGGCGTACGGGATCTTCGCTTGCAATGGGATACTATTCAACCACGAATCGCCGCGGAGGGGAGAGAATTTTGTGACGAGAAAGATCACACGAGCTGTTGGGCGCATCAAGATTGGGCTTCAGAGCAAGTTGTTCTTAGGGAATCTGCAGGCTTCAAGGGATTGGGGTTTTGCAGGGGATTACGTGGAAGCCATGTGGATGATGCTGCAGCAAGACCAACCCGACGATTATGTGGTTGCAACGGAGGAATCACACACGGTGGAGGAGTTCTTGGAGGTGGCATTTGGGTACGTCGGATTGAATTGGAAGGACCATGTAGTGATCGACAAGAGATACTTCCGGCCGACGGAGGTCGACAATCTGAAAGGGGATGCAAGCAAGGCAAAGAAGGTGTTGGGATGGAAACCAAAGGTCGGATTTGAGAAGCTGGTGAAGATGATGGTGGATGAAGACGTTGAAATGGCCAAGCGAGAGAAGGTTTTGGTCGATGCTGGCTACATGGATGCGCAGCAGCAACCTTAA

mRNA sequence

ATGGCATCCATCGCCGACGGTACCAGATCCGCCTCCAATACCAATGTCGAGGGCACTGCCCCGACGGAGAAGCGCCGGACGGCCTTAATTACCGGCATTACTGGCCAGGATGGTTCCTATCTGACTGAGTTCCTTCTCGACAAGGGCTACGAAGTCCATGGATTGATCCGGCGATCTTCCAACTTTAATACTCAGAGAATCAACCACATCTATATCGATCCTCACAATGTTCACAAGGCGCGAATGAAGCTTCACTACGCTGACCTCACTGACGCCTCCTCTCTTCGCCGATGGCTCGATACTATCCTTCCCGATGAGGTCTATAACCTCGCTGCTCAATCGCACGTTGCTGTTTCTTTTGAAATTCCGGATTATACCGCTGACGTTGTCGCCACTGGTGCCCTCCGTTTGCTTGAGGCGGTTCGATCTCATATCGCTGCCACTGGCCGGAGTCACATTCGATACTATCAAGCGGGATCGTCTGAAATGTTCGGGTCCACGCCGCCGCCTCAGTTGGAGACGACTCCATTTCATCCTCGATCTCCCTACGCCGCAGCGAAATGCGCTGCGCATTGGTATACGGTGAATTACCGTGAGGCGTACGGGATCTTCGCTTGCAATGGGATACTATTCAACCACGAATCGCCGCGGAGGGGAGAGAATTTTGTGACGAGAAAGATCACACGAGCTGTTGGGCGCATCAAGATTGGGCTTCAGAGCAAGTTGTTCTTAGGGAATCTGCAGGCTTCAAGGGATTGGGGTTTTGCAGGGGATTACGTGGAAGCCATGTGGATGATGCTGCAGCAAGACCAACCCGACGATTATGTGGTTGCAACGGAGGAATCACACACGGTGGAGGAGTTCTTGGAGGTGGCATTTGGGTACGTCGGATTGAATTGGAAGGACCATGTAGTGATCGACAAGAGATACTTCCGGCCGACGGAGGTCGACAATCTGAAAGGGGATGCAAGCAAGGCAAAGAAGGTGTTGGGATGGAAACCAAAGGTCGGATTTGAGAAGCTGGTGAAGATGATGGTGGATGAAGACGTTGAAATGGCCAAGCGAGAGAAGGTTTTGGTCGATGCTGGCTACATGGATGCGCAGCAGCAACCTTAA

Coding sequence (CDS)

ATGGCATCCATCGCCGACGGTACCAGATCCGCCTCCAATACCAATGTCGAGGGCACTGCCCCGACGGAGAAGCGCCGGACGGCCTTAATTACCGGCATTACTGGCCAGGATGGTTCCTATCTGACTGAGTTCCTTCTCGACAAGGGCTACGAAGTCCATGGATTGATCCGGCGATCTTCCAACTTTAATACTCAGAGAATCAACCACATCTATATCGATCCTCACAATGTTCACAAGGCGCGAATGAAGCTTCACTACGCTGACCTCACTGACGCCTCCTCTCTTCGCCGATGGCTCGATACTATCCTTCCCGATGAGGTCTATAACCTCGCTGCTCAATCGCACGTTGCTGTTTCTTTTGAAATTCCGGATTATACCGCTGACGTTGTCGCCACTGGTGCCCTCCGTTTGCTTGAGGCGGTTCGATCTCATATCGCTGCCACTGGCCGGAGTCACATTCGATACTATCAAGCGGGATCGTCTGAAATGTTCGGGTCCACGCCGCCGCCTCAGTTGGAGACGACTCCATTTCATCCTCGATCTCCCTACGCCGCAGCGAAATGCGCTGCGCATTGGTATACGGTGAATTACCGTGAGGCGTACGGGATCTTCGCTTGCAATGGGATACTATTCAACCACGAATCGCCGCGGAGGGGAGAGAATTTTGTGACGAGAAAGATCACACGAGCTGTTGGGCGCATCAAGATTGGGCTTCAGAGCAAGTTGTTCTTAGGGAATCTGCAGGCTTCAAGGGATTGGGGTTTTGCAGGGGATTACGTGGAAGCCATGTGGATGATGCTGCAGCAAGACCAACCCGACGATTATGTGGTTGCAACGGAGGAATCACACACGGTGGAGGAGTTCTTGGAGGTGGCATTTGGGTACGTCGGATTGAATTGGAAGGACCATGTAGTGATCGACAAGAGATACTTCCGGCCGACGGAGGTCGACAATCTGAAAGGGGATGCAAGCAAGGCAAAGAAGGTGTTGGGATGGAAACCAAAGGTCGGATTTGAGAAGCTGGTGAAGATGATGGTGGATGAAGACGTTGAAATGGCCAAGCGAGAGAAGGTTTTGGTCGATGCTGGCTACATGGATGCGCAGCAGCAACCTTAA

Protein sequence

MASIADGTRSASNTNVEGTAPTEKRRTALITGITGQDGSYLTEFLLDKGYEVHGLIRRSSNFNTQRINHIYIDPHNVHKARMKLHYADLTDASSLRRWLDTILPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHIAATGRSHIRYYQAGSSEMFGSTPPPQLETTPFHPRSPYAAAKCAAHWYTVNYREAYGIFACNGILFNHESPRRGENFVTRKITRAVGRIKIGLQSKLFLGNLQASRDWGFAGDYVEAMWMMLQQDQPDDYVVATEESHTVEEFLEVAFGYVGLNWKDHVVIDKRYFRPTEVDNLKGDASKAKKVLGWKPKVGFEKLVKMMVDEDVEMAKREKVLVDAGYMDAQQQP
Homology
[Close]
BLAST of Cp4.1LG01g06730 vs. Swiss-Prot
Match: GMD1_ARATH (GDP-mannose 4,6 dehydratase 1 OS=Arabidopsis thaliana GN=GMD1 PE=1 SV=1)

HSP 1 Score: 642.9 bits (1657), Expect = 2.2e-183
Identity = 308/347 (88.76%), Postives = 334/347 (96.25%), Query Frame = 1 

Query: 25  RRTALITGITGQDGSYLTEFLLDKGYEVHGLIRRSSNFNTQRINHIYIDPHNVHKARMKL 84
           R+ AL+TGITGQDGSYLTEFLL+KGYEVHGLIRRSSNFNTQR+NHIY+DPHNV+KA MKL
Sbjct: 16  RKIALVTGITGQDGSYLTEFLLEKGYEVHGLIRRSSNFNTQRLNHIYVDPHNVNKALMKL 75

Query: 85  HYADLTDASSLRRWLDTILPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSH 144
           HY DL+DASSLRRWLD I PDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSH
Sbjct: 76  HYGDLSDASSLRRWLDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSH 135

Query: 145 IAATGRSHIRYYQAGSSEMFGSTPPPQLETTPFHPRSPYAAAKCAAHWYTVNYREAYGIF 204
               GR+ I+YYQAGSSEMFGSTPPPQ ETTPFHPRSPYAA+KCAAHWYTVNYREAYG++
Sbjct: 136 NIDNGRA-IKYYQAGSSEMFGSTPPPQSETTPFHPRSPYAASKCAAHWYTVNYREAYGLY 195

Query: 205 ACNGILFNHESPRRGENFVTRKITRAVGRIKIGLQSKLFLGNLQASRDWGFAGDYVEAMW 264
           ACNGILFNHESPRRGENFVTRKITRA+GRIK+GLQ+KLFLGN+QASRDWGFAGDYVEAMW
Sbjct: 196 ACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNIQASRDWGFAGDYVEAMW 255

Query: 265 MMLQQDQPDDYVVATEESHTVEEFLEVAFGYVGLNWKDHVVIDKRYFRPTEVDNLKGDAS 324
           +MLQQ++PDDYVVATEESHTV+EFL+V+FGYVGLNWKDHV IDKRYFRPTEVDNLKGDAS
Sbjct: 256 LMLQQEKPDDYVVATEESHTVKEFLDVSFGYVGLNWKDHVEIDKRYFRPTEVDNLKGDAS 315

Query: 325 KAKKVLGWKPKVGFEKLVKMMVDEDVEMAKREKVLVDAGYMDAQQQP 372
           KAK++LGWKPKVGFEKLVKMMVDED+E+AKREKVL DAGYMDAQQQP
Sbjct: 316 KAKEMLGWKPKVGFEKLVKMMVDEDLELAKREKVLADAGYMDAQQQP 361

[Close]
BLAST of Cp4.1LG01g06730 vs. Swiss-Prot
Match: GMD2_ARATH (GDP-mannose 4,6 dehydratase 2 OS=Arabidopsis thaliana GN=MUR1 PE=1 SV=3)

HSP 1 Score: 642.1 bits (1655), Expect = 3.7e-183
Identity = 317/374 (84.76%), Postives = 347/374 (92.78%), Query Frame = 1 

Query: 1   MASIADGTRSASNTNVEGTAPT---EKRRTALITGITGQDGSYLTEFLLDKGYEVHGLIR 60
           MAS  +G+RS S +     A +   E R+ ALITGITGQDGSYLTEFLL KGYEVHGLIR
Sbjct: 1   MASENNGSRSDSESITAPKADSTVVEPRKIALITGITGQDGSYLTEFLLGKGYEVHGLIR 60

Query: 61  RSSNFNTQRINHIYIDPHNVHKARMKLHYADLTDASSLRRWLDTILPDEVYNLAAQSHVA 120
           RSSNFNTQRINHIYIDPHNV+KA MKLHYADLTDASSLRRW+D I PDEVYNLAAQSHVA
Sbjct: 61  RSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKPDEVYNLAAQSHVA 120

Query: 121 VSFEIPDYTADVVATGALRLLEAVRSHIAATGRSHIRYYQAGSSEMFGSTPPPQLETTPF 180
           VSFEIPDYTADVVATGALRLLEAVRSH   +GR+ ++YYQAGSSEMFGSTPPPQ ETTPF
Sbjct: 121 VSFEIPDYTADVVATGALRLLEAVRSHTIDSGRT-VKYYQAGSSEMFGSTPPPQSETTPF 180

Query: 181 HPRSPYAAAKCAAHWYTVNYREAYGIFACNGILFNHESPRRGENFVTRKITRAVGRIKIG 240
           HPRSPYAA+KCAAHWYTVNYREAYG+FACNGILFNHESPRRGENFVTRKITRA+GRIK+G
Sbjct: 181 HPRSPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVG 240

Query: 241 LQSKLFLGNLQASRDWGFAGDYVEAMWMMLQQDQPDDYVVATEESHTVEEFLEVAFGYVG 300
           LQ+KLFLGNLQASRDWGFAGDYVEAMW+MLQQ++PDDYVVATEE HTVEEFL+V+FGY+G
Sbjct: 241 LQTKLFLGNLQASRDWGFAGDYVEAMWLMLQQEKPDDYVVATEEGHTVEEFLDVSFGYLG 300

Query: 301 LNWKDHVVIDKRYFRPTEVDNLKGDASKAKKVLGWKPKVGFEKLVKMMVDEDVEMAKREK 360
           LNWKD+V ID+RYFRP EVDNL+GDASKAK+VLGWKP+VGFEKLVKMMVDED+E+AKREK
Sbjct: 301 LNWKDYVEIDQRYFRPAEVDNLQGDASKAKEVLGWKPQVGFEKLVKMMVDEDLELAKREK 360

Query: 361 VLVDAGYMDAQQQP 372
           VLVDAGYMDA+QQP
Sbjct: 361 VLVDAGYMDAKQQP 373

[Close]
BLAST of Cp4.1LG01g06730 vs. Swiss-Prot
Match: GMDS_MOUSE (GDP-mannose 4,6 dehydratase OS=Mus musculus GN=Gmds PE=1 SV=1)

HSP 1 Score: 384.8 bits (987), Expect = 1.1e-105
Identity = 191/348 (54.89%), Postives = 251/348 (72.13%), Query Frame = 1 

Query: 25  RRTALITGITGQDGSYLTEFLLDKGYEVHGLIRRSSNFNTQRINHIYIDPHNVHKARMKL 84
           R+ ALITGITGQDGSYL EFLL+KGYEVHG++RRSS+FNT RI H+Y +P    +  MKL
Sbjct: 23  RKVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKL 82

Query: 85  HYADLTDASSLRRWLDTILPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSH 144
           HY DLTD++ L + ++ + P E+YNL AQSHV +SF++ +YTADV   G LRLL+A+++ 
Sbjct: 83  HYGDLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAIKTC 142

Query: 145 IAATGRSHIRYYQAGSSEMFGSTPP-PQLETTPFHPRSPYAAAKCAAHWYTVNYREAYGI 204
                   +++YQA +SE++G     PQ ETTPF+PRSPY AAK  A+W  VN+REAY +
Sbjct: 143 GLINS---VKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVNFREAYNL 202

Query: 205 FACNGILFNHESPRRGENFVTRKITRAVGRIKIGLQSKLFLGNLQASRDWGFAGDYVEAM 264
           FA NGILFNHESPRRG NFVTRKI+R+V +I +G      LGNL A RDWG A DYVEAM
Sbjct: 203 FAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAM 262

Query: 265 WMMLQQDQPDDYVVATEESHTVEEFLEVAFGYVG--LNW---------------KDHVVI 324
           W+MLQ D+P+D+V+AT E H+V EF+E +F ++G  + W               K HV +
Sbjct: 263 WLMLQNDEPEDFVIATGEVHSVREFVEKSFMHIGKTIVWEGKNENEVGRCKETGKVHVTV 322

Query: 325 DKRYFRPTEVDNLKGDASKAKKVLGWKPKVGFEKLVKMMVDEDVEMAK 355
           D +Y+RPTEVD L+GD SKA++ L WKP+V F++LV+ MV  DVE+ +
Sbjct: 323 DLKYYRPTEVDFLQGDCSKAQQKLNWKPRVAFDELVREMVQADVELMR 367

[Close]
BLAST of Cp4.1LG01g06730 vs. Swiss-Prot
Match: GMDS_CRIGR (GDP-mannose 4,6 dehydratase OS=Cricetulus griseus GN=GMDS PE=2 SV=1)

HSP 1 Score: 384.8 bits (987), Expect = 1.1e-105
Identity = 191/348 (54.89%), Postives = 251/348 (72.13%), Query Frame = 1 

Query: 25  RRTALITGITGQDGSYLTEFLLDKGYEVHGLIRRSSNFNTQRINHIYIDPHNVHKARMKL 84
           R+ ALITGITGQDGSYL EFLL+KGYEVHG++RRSS+FNT RI H+Y +P    +  MKL
Sbjct: 23  RKVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKL 82

Query: 85  HYADLTDASSLRRWLDTILPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSH 144
           HY DLTD++ L + ++ + P E+YNL AQSHV +SF++ +YTADV   G LRLL+A+++ 
Sbjct: 83  HYGDLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAIKTC 142

Query: 145 IAATGRSHIRYYQAGSSEMFGSTPP-PQLETTPFHPRSPYAAAKCAAHWYTVNYREAYGI 204
                   +++YQA +SE++G     PQ ETTPF+PRSPY AAK  A+W  VN+REAY +
Sbjct: 143 GLINS---VKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVNFREAYNL 202

Query: 205 FACNGILFNHESPRRGENFVTRKITRAVGRIKIGLQSKLFLGNLQASRDWGFAGDYVEAM 264
           FA NGILFNHESPRRG NFVTRKI+R+V +I +G      LGNL A RDWG A DYVEAM
Sbjct: 203 FAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAM 262

Query: 265 WMMLQQDQPDDYVVATEESHTVEEFLEVAFGYVG--LNW---------------KDHVVI 324
           W+MLQ D+P+D+V+AT E H+V EF+E +F ++G  + W               K HV +
Sbjct: 263 WLMLQNDEPEDFVIATGEVHSVREFVEKSFMHIGKTIVWEGKNENEVGRCKETGKIHVTV 322

Query: 325 DKRYFRPTEVDNLKGDASKAKKVLGWKPKVGFEKLVKMMVDEDVEMAK 355
           D +Y+RPTEVD L+GD SKA++ L WKP+V F++LV+ MV  DVE+ +
Sbjct: 323 DLKYYRPTEVDFLQGDCSKAQQKLNWKPRVAFDELVREMVQADVELMR 367

[Close]
BLAST of Cp4.1LG01g06730 vs. Swiss-Prot
Match: GM4D_ECO57 (GDP-mannose 4,6-dehydratase OS=Escherichia coli O157:H7 GN=gmd PE=3 SV=1)

HSP 1 Score: 384.4 bits (986), Expect = 1.4e-105
Identity = 196/367 (53.41%), Postives = 251/367 (68.39%), Query Frame = 1 

Query: 26  RTALITGITGQDGSYLTEFLLDKGYEVHGLIRRSSNFNTQRINHIYIDPHNVHKARMKLH 85
           + ALITG+TGQDGSYL EFLL+KGYEVHG+ RR+S+FNT+R++HIY DPH  +  +  LH
Sbjct: 3   KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNP-KFHLH 62

Query: 86  YADLTDASSLRRWLDTILPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHI 145
           Y DL+D S+L R L  + PDEVYNL A SHVAVSFE P+YTADV A G LRLLEA+R   
Sbjct: 63  YGDLSDTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRF-- 122

Query: 146 AATGRSHIRYYQAGSSEMFGSTPP-PQLETTPFHPRSPYAAAKCAAHWYTVNYREAYGIF 205
                   R+YQA +SE++G     PQ ETTPF+PRSPYA AK  A+W TVNYRE+YG++
Sbjct: 123 -LGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESYGMY 182

Query: 206 ACNGILFNHESPRRGENFVTRKITRAVGRIKIGLQSKLFLGNLQASRDWGFAGDYVEAMW 265
           ACNGILFNHESPRRGE FVTRKITRA+  I  GL+S L+LGN+ + RDWG A DYV+  W
Sbjct: 183 ACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQW 242

Query: 266 MMLQQDQPDDYVVATEESHTVEEFLEVAFGYVGLNWKDH--------------------- 325
           MMLQQ+QP+D+V+AT   ++V +F+E+A   +G+  +                       
Sbjct: 243 MMLQQEQPEDFVIATGVQYSVRQFVEMAAAQLGIKLRFEGTGVEEKGIVVSVTGHDAPGV 302

Query: 326 ------VVIDKRYFRPTEVDNLKGDASKAKKVLGWKPKVGFEKLVKMMVDEDVEMAKREK 365
                 + +D RYFRP EV+ L GD +KA + LGWKP++   ++V  MV  D+E AK+  
Sbjct: 303 KPGDVIIAVDPRYFRPAEVETLLGDPTKAHEKLGWKPEITLREMVSEMVANDLEAAKKHS 362

[Close]
BLAST of Cp4.1LG01g06730 vs. TrEMBL
Match: A0A0A0KY32_CUCSA (GDP-mannose 4,6-dehydratase OS=Cucumis sativus GN=Csa_4G046810 PE=3 SV=1)

HSP 1 Score: 716.8 bits (1849), Expect = 1.3e-203
Identity = 354/371 (95.42%), Postives = 360/371 (97.04%), Query Frame = 1 

Query: 1   MASIADGTRSASNTNVEGTAPTEKRRTALITGITGQDGSYLTEFLLDKGYEVHGLIRRSS 60
           MASIADGTRS S+TN +   P EKRRTALITGITGQDGSYLTEFLLDKGYEVHGLIRRSS
Sbjct: 1   MASIADGTRSTSDTNGKAAEPAEKRRTALITGITGQDGSYLTEFLLDKGYEVHGLIRRSS 60

Query: 61  NFNTQRINHIYIDPHNVHKARMKLHYADLTDASSLRRWLDTILPDEVYNLAAQSHVAVSF 120
           NFNTQRINHIYIDPHN +KARMKLHYADLTDASSLRRWLD ILPDEVYNLAAQSHVAVSF
Sbjct: 61  NFNTQRINHIYIDPHNANKARMKLHYADLTDASSLRRWLDIILPDEVYNLAAQSHVAVSF 120

Query: 121 EIPDYTADVVATGALRLLEAVRSHIAATGRSHIRYYQAGSSEMFGSTPPPQLETTPFHPR 180
           EIPDYTADVVATGALRLLEAVRSHIAATGRSHIRYYQAGSSEMFGSTPPPQ ETTPFHPR
Sbjct: 121 EIPDYTADVVATGALRLLEAVRSHIAATGRSHIRYYQAGSSEMFGSTPPPQSETTPFHPR 180

Query: 181 SPYAAAKCAAHWYTVNYREAYGIFACNGILFNHESPRRGENFVTRKITRAVGRIKIGLQS 240
           SPYAAAKCAAHWYTVNYREAYGIFACNGILFNHESPRRGENFVTRKITRAVGRIKIGLQS
Sbjct: 181 SPYAAAKCAAHWYTVNYREAYGIFACNGILFNHESPRRGENFVTRKITRAVGRIKIGLQS 240

Query: 241 KLFLGNLQASRDWGFAGDYVEAMWMMLQQDQPDDYVVATEESHTVEEFLEVAFGYVGLNW 300
           KLFLGNLQASRDWGFAGDYVEAMWMMLQQDQPDDYVVATEESHTV+EFLEVAFGYVGLNW
Sbjct: 241 KLFLGNLQASRDWGFAGDYVEAMWMMLQQDQPDDYVVATEESHTVKEFLEVAFGYVGLNW 300

Query: 301 KDHVVIDKRYFRPTEVDNLKGDASKAKKVLGWKPKVGFEKLVKMMVDEDVEMAKREKVLV 360
           KDHVVIDKRYFRP EVDNLKGDASK K+VLGWKPKVGFEKLVKMMVDEDVE+AKREKVLV
Sbjct: 301 KDHVVIDKRYFRPAEVDNLKGDASKVKRVLGWKPKVGFEKLVKMMVDEDVEIAKREKVLV 360

Query: 361 DAGYMDAQQQP 372
           DAGYMDAQQQP
Sbjct: 361 DAGYMDAQQQP 371

[Close]
BLAST of Cp4.1LG01g06730 vs. TrEMBL
Match: A0A059AI89_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J02407 PE=3 SV=1)

HSP 1 Score: 692.2 bits (1785), Expect = 3.5e-196
Identity = 337/371 (90.84%), Postives = 352/371 (94.88%), Query Frame = 1 

Query: 1   MASIADGTRSASNTNVEGTAPTEKRRTALITGITGQDGSYLTEFLLDKGYEVHGLIRRSS 60
           MA+  D  +S S  N E   P ++R+ ALITGITGQDGSYLTE LLDKGYEVHGLIRRSS
Sbjct: 1   MATHDDAPKSGSGANGEAPPPPQQRKVALITGITGQDGSYLTELLLDKGYEVHGLIRRSS 60

Query: 61  NFNTQRINHIYIDPHNVHKARMKLHYADLTDASSLRRWLDTILPDEVYNLAAQSHVAVSF 120
           NFNTQRINHIYIDPHN HKARMKLHYADLTDASSLRRW+DTI PDEVYNLAAQSHVAVSF
Sbjct: 61  NFNTQRINHIYIDPHNAHKARMKLHYADLTDASSLRRWIDTIAPDEVYNLAAQSHVAVSF 120

Query: 121 EIPDYTADVVATGALRLLEAVRSHIAATGRSHIRYYQAGSSEMFGSTPPPQLETTPFHPR 180
           EIPDYTADVVATGALRLLEAVRSH++ATGRSHIRYYQAGSSEMFGSTPPPQ ETTPFHPR
Sbjct: 121 EIPDYTADVVATGALRLLEAVRSHVSATGRSHIRYYQAGSSEMFGSTPPPQSETTPFHPR 180

Query: 181 SPYAAAKCAAHWYTVNYREAYGIFACNGILFNHESPRRGENFVTRKITRAVGRIKIGLQS 240
           SPYAA+KCAAHWYTVNYREAYG+FACNGILFNHESPRRGENFVTRKITRAVGRIKIGLQS
Sbjct: 181 SPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRAVGRIKIGLQS 240

Query: 241 KLFLGNLQASRDWGFAGDYVEAMWMMLQQDQPDDYVVATEESHTVEEFLEVAFGYVGLNW 300
           KLFLGNLQASRDWGFAGDYVEAMWMMLQQ++PDDYVVATEESHTVEEFLEVAFGYVGLNW
Sbjct: 241 KLFLGNLQASRDWGFAGDYVEAMWMMLQQEKPDDYVVATEESHTVEEFLEVAFGYVGLNW 300

Query: 301 KDHVVIDKRYFRPTEVDNLKGDASKAKKVLGWKPKVGFEKLVKMMVDEDVEMAKREKVLV 360
           +DHVVIDKRYFRP EVDNLKGDASKAKKVLGWKP VGFEKLVKMMVDED+E+AKREKVLV
Sbjct: 301 RDHVVIDKRYFRPAEVDNLKGDASKAKKVLGWKPNVGFEKLVKMMVDEDIELAKREKVLV 360

Query: 361 DAGYMDAQQQP 372
           DAGYMDAQQQP
Sbjct: 361 DAGYMDAQQQP 371

[Close]
BLAST of Cp4.1LG01g06730 vs. TrEMBL
Match: E0D359_TOBAC (GDP-mannose 4,6-dehydratase OS=Nicotiana tabacum GN=GMD PE=2 SV=1)

HSP 1 Score: 684.5 bits (1765), Expect = 7.2e-194
Identity = 330/349 (94.56%), Postives = 344/349 (98.57%), Query Frame = 1 

Query: 23  EKRRTALITGITGQDGSYLTEFLLDKGYEVHGLIRRSSNFNTQRINHIYIDPHNVHKARM 82
           ++R+ ALITGITGQDGSYL EFLLDKGYEVHGLIRRSSNFNTQR+NHIYIDPHNVHKARM
Sbjct: 19  DRRKVALITGITGQDGSYLAEFLLDKGYEVHGLIRRSSNFNTQRVNHIYIDPHNVHKARM 78

Query: 83  KLHYADLTDASSLRRWLDTILPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVR 142
           KLHYAD+TDASSLRRWLDTILPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVR
Sbjct: 79  KLHYADVTDASSLRRWLDTILPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVR 138

Query: 143 SHIAATGRSHIRYYQAGSSEMFGSTPPPQLETTPFHPRSPYAAAKCAAHWYTVNYREAYG 202
           SHI+ATGRSHIRYYQAGSSEMFGSTPPPQ ETTPFHPRSPYA +KCAAHWYTVNYREAYG
Sbjct: 139 SHISATGRSHIRYYQAGSSEMFGSTPPPQSETTPFHPRSPYAVSKCAAHWYTVNYREAYG 198

Query: 203 IFACNGILFNHESPRRGENFVTRKITRAVGRIKIGLQSKLFLGNLQASRDWGFAGDYVEA 262
           IFACNGILFNHESPRRGENFVTRKITRAVGRIKIGLQSKLFLGNLQASRDWGFAGDYVEA
Sbjct: 199 IFACNGILFNHESPRRGENFVTRKITRAVGRIKIGLQSKLFLGNLQASRDWGFAGDYVEA 258

Query: 263 MWMMLQQDQPDDYVVATEESHTVEEFLEVAFGYVGLNWKDHVVIDKRYFRPTEVDNLKGD 322
           MWMMLQQ++PDDYVVATEESHTVEEFLEVAFGYVGLNWKDHVVIDKRYFRPTEVDNLKGD
Sbjct: 259 MWMMLQQEKPDDYVVATEESHTVEEFLEVAFGYVGLNWKDHVVIDKRYFRPTEVDNLKGD 318

Query: 323 ASKAKKVLGWKPKVGFEKLVKMMVDEDVEMAKREKVLVDAGYMDAQQQP 372
           +SKA+ VLGWKP+VGFE+LVKMMVDEDVE+AKREKVLVDAGYMDAQQQP
Sbjct: 319 SSKARNVLGWKPRVGFEQLVKMMVDEDVELAKREKVLVDAGYMDAQQQP 367

[Close]
BLAST of Cp4.1LG01g06730 vs. TrEMBL
Match: V4UHF1_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10025903mg PE=3 SV=1)

HSP 1 Score: 682.9 bits (1761), Expect = 2.1e-193
Identity = 337/371 (90.84%), Postives = 353/371 (95.15%), Query Frame = 1 

Query: 1   MASIADGTRSASNTNVEGTAPTEKRRTALITGITGQDGSYLTEFLLDKGYEVHGLIRRSS 60
           MAS  + +RS S  N + T    KR+ ALITGITGQDGSYLTEFLL+KGYEVHGLIRRSS
Sbjct: 1   MASENESSRSESTINGDATP---KRKIALITGITGQDGSYLTEFLLNKGYEVHGLIRRSS 60

Query: 61  NFNTQRINHIYIDPHNVHKARMKLHYADLTDASSLRRWLDTILPDEVYNLAAQSHVAVSF 120
           NFNTQRINHIYIDPHN HKARMKLHYADLTDASSLRRWLDTILPDEVYNLAAQSHVAVSF
Sbjct: 61  NFNTQRINHIYIDPHNAHKARMKLHYADLTDASSLRRWLDTILPDEVYNLAAQSHVAVSF 120

Query: 121 EIPDYTADVVATGALRLLEAVRSHIAATGRSHIRYYQAGSSEMFGSTPPPQLETTPFHPR 180
           EIPDYTADVVATGALRLLEAVRSHIA +GRSHIRYYQAGSSEMFGSTPPPQ ETTPFHPR
Sbjct: 121 EIPDYTADVVATGALRLLEAVRSHIADSGRSHIRYYQAGSSEMFGSTPPPQSETTPFHPR 180

Query: 181 SPYAAAKCAAHWYTVNYREAYGIFACNGILFNHESPRRGENFVTRKITRAVGRIKIGLQS 240
           SPYAA+KCAAHWYTVNYREAYG+FACNGILFNHESPRRGENFVTRKITRAVGRIKIGLQS
Sbjct: 181 SPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRAVGRIKIGLQS 240

Query: 241 KLFLGNLQASRDWGFAGDYVEAMWMMLQQDQPDDYVVATEESHTVEEFLEVAFGYVGLNW 300
           KLFLGNLQASRDWGFAGDYVEAMWMMLQQ++PDDYVVATEESHTVEEFLEVAFGYV LNW
Sbjct: 241 KLFLGNLQASRDWGFAGDYVEAMWMMLQQEKPDDYVVATEESHTVEEFLEVAFGYVRLNW 300

Query: 301 KDHVVIDKRYFRPTEVDNLKGDASKAKKVLGWKPKVGFEKLVKMMVDEDVEMAKREKVLV 360
           KDHVVIDKRYFRP EVDNLKGD+SKA+KVLGWKP+VGFE+LVKMMVDED+E+AKREKVLV
Sbjct: 301 KDHVVIDKRYFRPAEVDNLKGDSSKARKVLGWKPRVGFEQLVKMMVDEDIELAKREKVLV 360

Query: 361 DAGYMDAQQQP 372
           DAGYMDAQQQP
Sbjct: 361 DAGYMDAQQQP 368

[Close]
BLAST of Cp4.1LG01g06730 vs. TrEMBL
Match: B7XH28_NICBE (GDP-mannose 4,6-dehydratase OS=Nicotiana benthamiana GN=GMD PE=2 SV=2)

HSP 1 Score: 682.6 bits (1760), Expect = 2.8e-193
Identity = 328/349 (93.98%), Postives = 343/349 (98.28%), Query Frame = 1 

Query: 23  EKRRTALITGITGQDGSYLTEFLLDKGYEVHGLIRRSSNFNTQRINHIYIDPHNVHKARM 82
           ++R+ AL+TGITGQDGSYLTEFLLDKGYEVHGLIRRSSNFNT R+NHIYIDPHN HKARM
Sbjct: 19  DRRKVALVTGITGQDGSYLTEFLLDKGYEVHGLIRRSSNFNTHRVNHIYIDPHNAHKARM 78

Query: 83  KLHYADLTDASSLRRWLDTILPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVR 142
           KLHYAD+TDASSLRRWLDTILPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVR
Sbjct: 79  KLHYADVTDASSLRRWLDTILPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVR 138

Query: 143 SHIAATGRSHIRYYQAGSSEMFGSTPPPQLETTPFHPRSPYAAAKCAAHWYTVNYREAYG 202
           SHI+ATGRSHIRYYQAGSSEMFGSTPPPQ E TPFHPRSPYA +KCAAHWYTVNYREAYG
Sbjct: 139 SHISATGRSHIRYYQAGSSEMFGSTPPPQSEATPFHPRSPYAVSKCAAHWYTVNYREAYG 198

Query: 203 IFACNGILFNHESPRRGENFVTRKITRAVGRIKIGLQSKLFLGNLQASRDWGFAGDYVEA 262
           IFACNGILFNHESPRRGENFVTRKITRAVGRIKIGLQSKLFLGNLQASRDWGFAGDYVEA
Sbjct: 199 IFACNGILFNHESPRRGENFVTRKITRAVGRIKIGLQSKLFLGNLQASRDWGFAGDYVEA 258

Query: 263 MWMMLQQDQPDDYVVATEESHTVEEFLEVAFGYVGLNWKDHVVIDKRYFRPTEVDNLKGD 322
           MWMMLQQ++PDDYVVATEESHTVEEFLEVAFGYVGLNWKDHVVIDKRYFRPTEVDNLKGD
Sbjct: 259 MWMMLQQEKPDDYVVATEESHTVEEFLEVAFGYVGLNWKDHVVIDKRYFRPTEVDNLKGD 318

Query: 323 ASKAKKVLGWKPKVGFEKLVKMMVDEDVEMAKREKVLVDAGYMDAQQQP 372
           +SKA+KVLGWKP+VGFE+LVKMMVDEDVE+AKREKVLVDAGYMDAQQQP
Sbjct: 319 SSKARKVLGWKPRVGFEQLVKMMVDEDVELAKREKVLVDAGYMDAQQQP 367

[Close]
BLAST of Cp4.1LG01g06730 vs. TAIR10
Match: AT5G66280.1 (AT5G66280.1 GDP-D-mannose 4,6-dehydratase 1)

HSP 1 Score: 642.9 bits (1657), Expect = 1.2e-184
Identity = 308/347 (88.76%), Postives = 334/347 (96.25%), Query Frame = 1 

Query: 25  RRTALITGITGQDGSYLTEFLLDKGYEVHGLIRRSSNFNTQRINHIYIDPHNVHKARMKL 84
           R+ AL+TGITGQDGSYLTEFLL+KGYEVHGLIRRSSNFNTQR+NHIY+DPHNV+KA MKL
Sbjct: 16  RKIALVTGITGQDGSYLTEFLLEKGYEVHGLIRRSSNFNTQRLNHIYVDPHNVNKALMKL 75

Query: 85  HYADLTDASSLRRWLDTILPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSH 144
           HY DL+DASSLRRWLD I PDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSH
Sbjct: 76  HYGDLSDASSLRRWLDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSH 135

Query: 145 IAATGRSHIRYYQAGSSEMFGSTPPPQLETTPFHPRSPYAAAKCAAHWYTVNYREAYGIF 204
               GR+ I+YYQAGSSEMFGSTPPPQ ETTPFHPRSPYAA+KCAAHWYTVNYREAYG++
Sbjct: 136 NIDNGRA-IKYYQAGSSEMFGSTPPPQSETTPFHPRSPYAASKCAAHWYTVNYREAYGLY 195

Query: 205 ACNGILFNHESPRRGENFVTRKITRAVGRIKIGLQSKLFLGNLQASRDWGFAGDYVEAMW 264
           ACNGILFNHESPRRGENFVTRKITRA+GRIK+GLQ+KLFLGN+QASRDWGFAGDYVEAMW
Sbjct: 196 ACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNIQASRDWGFAGDYVEAMW 255

Query: 265 MMLQQDQPDDYVVATEESHTVEEFLEVAFGYVGLNWKDHVVIDKRYFRPTEVDNLKGDAS 324
           +MLQQ++PDDYVVATEESHTV+EFL+V+FGYVGLNWKDHV IDKRYFRPTEVDNLKGDAS
Sbjct: 256 LMLQQEKPDDYVVATEESHTVKEFLDVSFGYVGLNWKDHVEIDKRYFRPTEVDNLKGDAS 315

Query: 325 KAKKVLGWKPKVGFEKLVKMMVDEDVEMAKREKVLVDAGYMDAQQQP 372
           KAK++LGWKPKVGFEKLVKMMVDED+E+AKREKVL DAGYMDAQQQP
Sbjct: 316 KAKEMLGWKPKVGFEKLVKMMVDEDLELAKREKVLADAGYMDAQQQP 361

[Close]
BLAST of Cp4.1LG01g06730 vs. TAIR10
Match: AT3G51160.1 (AT3G51160.1 NAD(P)-binding Rossmann-fold superfamily protein)

HSP 1 Score: 642.1 bits (1655), Expect = 2.1e-184
Identity = 317/374 (84.76%), Postives = 347/374 (92.78%), Query Frame = 1 

Query: 1   MASIADGTRSASNTNVEGTAPT---EKRRTALITGITGQDGSYLTEFLLDKGYEVHGLIR 60
           MAS  +G+RS S +     A +   E R+ ALITGITGQDGSYLTEFLL KGYEVHGLIR
Sbjct: 1   MASENNGSRSDSESITAPKADSTVVEPRKIALITGITGQDGSYLTEFLLGKGYEVHGLIR 60

Query: 61  RSSNFNTQRINHIYIDPHNVHKARMKLHYADLTDASSLRRWLDTILPDEVYNLAAQSHVA 120
           RSSNFNTQRINHIYIDPHNV+KA MKLHYADLTDASSLRRW+D I PDEVYNLAAQSHVA
Sbjct: 61  RSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKPDEVYNLAAQSHVA 120

Query: 121 VSFEIPDYTADVVATGALRLLEAVRSHIAATGRSHIRYYQAGSSEMFGSTPPPQLETTPF 180
           VSFEIPDYTADVVATGALRLLEAVRSH   +GR+ ++YYQAGSSEMFGSTPPPQ ETTPF
Sbjct: 121 VSFEIPDYTADVVATGALRLLEAVRSHTIDSGRT-VKYYQAGSSEMFGSTPPPQSETTPF 180

Query: 181 HPRSPYAAAKCAAHWYTVNYREAYGIFACNGILFNHESPRRGENFVTRKITRAVGRIKIG 240
           HPRSPYAA+KCAAHWYTVNYREAYG+FACNGILFNHESPRRGENFVTRKITRA+GRIK+G
Sbjct: 181 HPRSPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVG 240

Query: 241 LQSKLFLGNLQASRDWGFAGDYVEAMWMMLQQDQPDDYVVATEESHTVEEFLEVAFGYVG 300
           LQ+KLFLGNLQASRDWGFAGDYVEAMW+MLQQ++PDDYVVATEE HTVEEFL+V+FGY+G
Sbjct: 241 LQTKLFLGNLQASRDWGFAGDYVEAMWLMLQQEKPDDYVVATEEGHTVEEFLDVSFGYLG 300

Query: 301 LNWKDHVVIDKRYFRPTEVDNLKGDASKAKKVLGWKPKVGFEKLVKMMVDEDVEMAKREK 360
           LNWKD+V ID+RYFRP EVDNL+GDASKAK+VLGWKP+VGFEKLVKMMVDED+E+AKREK
Sbjct: 301 LNWKDYVEIDQRYFRPAEVDNLQGDASKAKEVLGWKPQVGFEKLVKMMVDEDLELAKREK 360

Query: 361 VLVDAGYMDAQQQP 372
           VLVDAGYMDA+QQP
Sbjct: 361 VLVDAGYMDAKQQP 373

[Close]
BLAST of Cp4.1LG01g06730 vs. TAIR10
Match: AT2G47650.2 (AT2G47650.2 UDP-xylose synthase 4)

HSP 1 Score: 59.3 bits (142), Expect = 5.8e-09
Identity = 86/353 (24.36%), Postives = 142/353 (40.23%), Query Frame = 1 

Query: 18  GTAPTEKRRTAL---ITGITGQDGSYLTEFLLDKGYEVHGLIRRSSNFNTQRINHIYIDP 77
           G  P   +R  L   +TG  G  GS+L + L+ +G  V  +     NF T R  ++    
Sbjct: 110 GKIPLGLKRKVLRVVVTGGAGFVGSHLVDRLMARGDNVIVV----DNFFTGRKENVM--- 169

Query: 78  HNVHKARMKLHYADLTDASSLRRWLDTILPDEVYNLAAQ-SHVAVSFEIPDYTADVVATG 137
           H+ +    ++   D+ +   L         D++Y+LA   S V   F  P  T      G
Sbjct: 170 HHFNNPNFEMIRHDVVEPILLE-------VDQIYHLACPASPVHYKFN-PVKTIKTNVVG 229

Query: 138 ALRLLEAVRSHIAATGRSHIRYYQAGSSEMFGST-PPPQLET-----TPFHPRSPYAAAK 197
            L +L   +       R   R+    +SE++G     PQ+ET      P   RS Y   K
Sbjct: 230 TLNMLGLAK-------RVGARFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGK 289

Query: 198 CAAHWYTVNYREAYGIFACNGILFNHESPRRG-------ENFVTRKITRAVGRIKIGLQS 257
             A   T++Y     +      +FN   PR          NFV + + +         + 
Sbjct: 290 RTAETLTMDYHRGANVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRK---------EP 349

Query: 258 KLFLGNLQASRDWGFAGDYVEAMWMMLQQDQPDDYVVATEESHTVEEFLEVAFGYVGLNW 317
               G+ + +R + F  D VE +  +++ +    + +      T+   LE+A   VG   
Sbjct: 350 LTVYGDGKQTRSFQFVSDLVEGLMRLMEGEHVGPFNLGNPGEFTM---LELAKWMVGEQV 409

Query: 318 KDHVVID--KRYFRPTEVDN---LKGDASKAKKVLGWKPKVGFEKLVKMMVDE 349
               +    K  FRP   D+    K D +KAK++LGW+PKV   + + +MV +
Sbjct: 410 VQETIDPNAKIEFRPNTEDDPHKRKPDITKAKELLGWEPKVALRQGLPLMVKD 428

[Close]
BLAST of Cp4.1LG01g06730 vs. TAIR10
Match: AT3G62830.1 (AT3G62830.1 NAD(P)-binding Rossmann-fold superfamily protein)

HSP 1 Score: 57.0 bits (136), Expect = 2.9e-08
Identity = 83/351 (23.65%), Postives = 138/351 (39.32%), Query Frame = 1 

Query: 18  GTAPTEKRRTAL---ITGITGQDGSYLTEFLLDKGYEVHGLIRRSSNFNTQRINHIYIDP 77
           G  P   +R  L   +TG  G  GS+L + L+ +G  V  +     NF T R  ++    
Sbjct: 108 GKIPLGLKRKGLRVVVTGGAGFVGSHLVDRLMARGDTVIVV----DNFFTGRKENVM--- 167

Query: 78  HNVHKARMKLHYADLTDASSLRRWLDTILPDEVYNLAAQ-SHVAVSFEIPDYTADVVATG 137
           H+      ++   D+ +   L         D++Y+LA   S V   F  P  T      G
Sbjct: 168 HHFSNPNFEMIRHDVVEPILLE-------VDQIYHLACPASPVHYKFN-PVKTIKTNVVG 227

Query: 138 ALRLLEAVRSHIAATGRSHIRYYQAGSSEMFGST-PPPQLET-----TPFHPRSPYAAAK 197
            L +L   +       R   R+    +SE++G     PQ+ET      P   RS Y   K
Sbjct: 228 TLNMLGLAK-------RVGARFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGK 287

Query: 198 CAAHWYTVNYREAYGIFACNGILFNHESPRRG-------ENFVTRKITRAVGRIKIGLQS 257
             A   T++Y     +      +FN   PR          NFV + + +         + 
Sbjct: 288 RTAETLTMDYHRGANVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRK---------EP 347

Query: 258 KLFLGNLQASRDWGFAGDYVEAMWMMLQQDQPDDYVVATEESHTVEEFLEVAFGYVGLNW 317
               G+ + +R + F  D VE +  +++ +    + +      T+ E  +V    +  N 
Sbjct: 348 LTVYGDGKQTRSFQFVSDLVEGLMRLMEGEHVGPFNLGNPGEFTMLELAKVVQETIDPNA 407

Query: 318 KDHVVIDKRYFRPTEVDN---LKGDASKAKKVLGWKPKVGFEKLVKMMVDE 349
                     FRP   D+    K D +KAK++LGW+PKV   + + +MV +
Sbjct: 408 NIE-------FRPNTEDDPHKRKPDITKAKELLGWEPKVSLRQGLPLMVKD 420

[Close]
BLAST of Cp4.1LG01g06730 vs. TAIR10
Match: AT2G28760.2 (AT2G28760.2 UDP-XYL synthase 6)

HSP 1 Score: 53.5 bits (127), Expect = 3.2e-07
Identity = 80/334 (23.95%), Postives = 127/334 (38.02%), Query Frame = 1 

Query: 29  LITGITGQDGSYLTEFLLDKGYEVHGLIRRSSNFNTQRINHIYIDPHNVHKARMKLHYAD 88
           L+TG  G  GS+L + L+    E + +I   + F   + N      H     R +L   D
Sbjct: 34  LVTGGAGFIGSHLVDKLMQN--EKNEVIVADNYFTGSKDNLKKWIGH----PRFELIRHD 93

Query: 89  LTDASSLRRWLDTILPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHIAAT 148
           +T+   +         D++Y+LA  +        P  T      G L +L   +      
Sbjct: 94  VTEPLFVE-------VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAK------ 153

Query: 149 GRSHIRYYQAGSSEMFGST-PPPQLET-----TPFHPRSPYAAAKCAAHWYTVNYREAYG 208
            R   R     +SE++G     PQ E+      P   RS Y   K  A     +Y   +G
Sbjct: 154 -RVGARILLTSTSEVYGDPLVHPQTESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHG 213

Query: 209 IFACNGILFNHESPRRG-------ENFVTRKIT-RAVGRIKIGLQSKLFLGNLQASRDWG 268
           I      +FN   PR          NF+ + +   A+   K G Q++ F           
Sbjct: 214 IEIRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEALTVQKPGTQTRSFC---------- 273

Query: 269 FAGDYVEAMWMMLQQDQPDDYVVATEESHTVEEFLEVAFGYVGLNWKDHVVIDKRYFRPT 328
           +  D VE +  +++ DQ     +      T+ E  E     +    K  V I      P 
Sbjct: 274 YVSDMVEGLMRLMEGDQTGPINIGNPGEFTMVELAETVKELI----KPDVEIKMVENTPD 333

Query: 329 EVDNLKGDASKAKKVLGWKPKVGFEKLVKMMVDE 349
           +    K D SKAK+VLGW+PKV   + + +M ++
Sbjct: 334 DPRQRKPDISKAKEVLGWEPKVKLREGLPLMEED 333

[Close]
BLAST of Cp4.1LG01g06730 vs. NCBI nr
Match: gi|659102322|ref|XP_008452068.1| (PREDICTED: GDP-mannose 4,6 dehydratase 1 [Cucumis melo])

HSP 1 Score: 718.4 bits (1853), Expect = 6.5e-204
Identity = 355/371 (95.69%), Postives = 360/371 (97.04%), Query Frame = 1 

Query: 1   MASIADGTRSASNTNVEGTAPTEKRRTALITGITGQDGSYLTEFLLDKGYEVHGLIRRSS 60
           MASIADGTRS S+TN +   P EKRRTALITGITGQDGSYLTEFLLDKGYEVHGLIRRSS
Sbjct: 1   MASIADGTRSTSDTNGKAAEPAEKRRTALITGITGQDGSYLTEFLLDKGYEVHGLIRRSS 60

Query: 61  NFNTQRINHIYIDPHNVHKARMKLHYADLTDASSLRRWLDTILPDEVYNLAAQSHVAVSF 120
           NFNTQRINHIYIDPHN +KARMKLHYADLTDASSLRRWLD ILPDEVYNLAAQSHVAVSF
Sbjct: 61  NFNTQRINHIYIDPHNANKARMKLHYADLTDASSLRRWLDIILPDEVYNLAAQSHVAVSF 120

Query: 121 EIPDYTADVVATGALRLLEAVRSHIAATGRSHIRYYQAGSSEMFGSTPPPQLETTPFHPR 180
           EIPDYTADVVATGALRLLEAVRSHIAATGRSHIRYYQAGSSEMFGSTPPPQ ETTPFHPR
Sbjct: 121 EIPDYTADVVATGALRLLEAVRSHIAATGRSHIRYYQAGSSEMFGSTPPPQSETTPFHPR 180

Query: 181 SPYAAAKCAAHWYTVNYREAYGIFACNGILFNHESPRRGENFVTRKITRAVGRIKIGLQS 240
           SPYAAAKCAAHWYTVNYREAYGIFACNGILFNHESPRRGENFVTRKITRAVGRIKIGLQS
Sbjct: 181 SPYAAAKCAAHWYTVNYREAYGIFACNGILFNHESPRRGENFVTRKITRAVGRIKIGLQS 240

Query: 241 KLFLGNLQASRDWGFAGDYVEAMWMMLQQDQPDDYVVATEESHTVEEFLEVAFGYVGLNW 300
           KLFLGNLQASRDWGFAGDYVEAMWMMLQQDQPDDYVVATEESHTVEEFLEVAFGYVGLNW
Sbjct: 241 KLFLGNLQASRDWGFAGDYVEAMWMMLQQDQPDDYVVATEESHTVEEFLEVAFGYVGLNW 300

Query: 301 KDHVVIDKRYFRPTEVDNLKGDASKAKKVLGWKPKVGFEKLVKMMVDEDVEMAKREKVLV 360
           KDHVVIDKRYFRP EVDNLKGDASK K+VLGWKPKVGFEKLVKMMVDEDVE+AKREKVLV
Sbjct: 301 KDHVVIDKRYFRPAEVDNLKGDASKVKRVLGWKPKVGFEKLVKMMVDEDVEIAKREKVLV 360

Query: 361 DAGYMDAQQQP 372
           DAGYMDAQQQP
Sbjct: 361 DAGYMDAQQQP 371

[Close]
BLAST of Cp4.1LG01g06730 vs. NCBI nr
Match: gi|778690764|ref|XP_011653164.1| (PREDICTED: GDP-mannose 4,6 dehydratase 1 [Cucumis sativus])

HSP 1 Score: 716.8 bits (1849), Expect = 1.9e-203
Identity = 354/371 (95.42%), Postives = 360/371 (97.04%), Query Frame = 1 

Query: 1   MASIADGTRSASNTNVEGTAPTEKRRTALITGITGQDGSYLTEFLLDKGYEVHGLIRRSS 60
           MASIADGTRS S+TN +   P EKRRTALITGITGQDGSYLTEFLLDKGYEVHGLIRRSS
Sbjct: 1   MASIADGTRSTSDTNGKAAEPAEKRRTALITGITGQDGSYLTEFLLDKGYEVHGLIRRSS 60

Query: 61  NFNTQRINHIYIDPHNVHKARMKLHYADLTDASSLRRWLDTILPDEVYNLAAQSHVAVSF 120
           NFNTQRINHIYIDPHN +KARMKLHYADLTDASSLRRWLD ILPDEVYNLAAQSHVAVSF
Sbjct: 61  NFNTQRINHIYIDPHNANKARMKLHYADLTDASSLRRWLDIILPDEVYNLAAQSHVAVSF 120

Query: 121 EIPDYTADVVATGALRLLEAVRSHIAATGRSHIRYYQAGSSEMFGSTPPPQLETTPFHPR 180
           EIPDYTADVVATGALRLLEAVRSHIAATGRSHIRYYQAGSSEMFGSTPPPQ ETTPFHPR
Sbjct: 121 EIPDYTADVVATGALRLLEAVRSHIAATGRSHIRYYQAGSSEMFGSTPPPQSETTPFHPR 180

Query: 181 SPYAAAKCAAHWYTVNYREAYGIFACNGILFNHESPRRGENFVTRKITRAVGRIKIGLQS 240
           SPYAAAKCAAHWYTVNYREAYGIFACNGILFNHESPRRGENFVTRKITRAVGRIKIGLQS
Sbjct: 181 SPYAAAKCAAHWYTVNYREAYGIFACNGILFNHESPRRGENFVTRKITRAVGRIKIGLQS 240

Query: 241 KLFLGNLQASRDWGFAGDYVEAMWMMLQQDQPDDYVVATEESHTVEEFLEVAFGYVGLNW 300
           KLFLGNLQASRDWGFAGDYVEAMWMMLQQDQPDDYVVATEESHTV+EFLEVAFGYVGLNW
Sbjct: 241 KLFLGNLQASRDWGFAGDYVEAMWMMLQQDQPDDYVVATEESHTVKEFLEVAFGYVGLNW 300

Query: 301 KDHVVIDKRYFRPTEVDNLKGDASKAKKVLGWKPKVGFEKLVKMMVDEDVEMAKREKVLV 360
           KDHVVIDKRYFRP EVDNLKGDASK K+VLGWKPKVGFEKLVKMMVDEDVE+AKREKVLV
Sbjct: 301 KDHVVIDKRYFRPAEVDNLKGDASKVKRVLGWKPKVGFEKLVKMMVDEDVEIAKREKVLV 360

Query: 361 DAGYMDAQQQP 372
           DAGYMDAQQQP
Sbjct: 361 DAGYMDAQQQP 371

[Close]
BLAST of Cp4.1LG01g06730 vs. NCBI nr
Match: gi|702482235|ref|XP_010033470.1| (PREDICTED: GDP-mannose 4,6 dehydratase 1 [Eucalyptus grandis])

HSP 1 Score: 692.2 bits (1785), Expect = 5.0e-196
Identity = 337/371 (90.84%), Postives = 352/371 (94.88%), Query Frame = 1 

Query: 1   MASIADGTRSASNTNVEGTAPTEKRRTALITGITGQDGSYLTEFLLDKGYEVHGLIRRSS 60
           MA+  D  +S S  N E   P ++R+ ALITGITGQDGSYLTE LLDKGYEVHGLIRRSS
Sbjct: 1   MATHDDAPKSGSGANGEAPPPPQQRKVALITGITGQDGSYLTELLLDKGYEVHGLIRRSS 60

Query: 61  NFNTQRINHIYIDPHNVHKARMKLHYADLTDASSLRRWLDTILPDEVYNLAAQSHVAVSF 120
           NFNTQRINHIYIDPHN HKARMKLHYADLTDASSLRRW+DTI PDEVYNLAAQSHVAVSF
Sbjct: 61  NFNTQRINHIYIDPHNAHKARMKLHYADLTDASSLRRWIDTIAPDEVYNLAAQSHVAVSF 120

Query: 121 EIPDYTADVVATGALRLLEAVRSHIAATGRSHIRYYQAGSSEMFGSTPPPQLETTPFHPR 180
           EIPDYTADVVATGALRLLEAVRSH++ATGRSHIRYYQAGSSEMFGSTPPPQ ETTPFHPR
Sbjct: 121 EIPDYTADVVATGALRLLEAVRSHVSATGRSHIRYYQAGSSEMFGSTPPPQSETTPFHPR 180

Query: 181 SPYAAAKCAAHWYTVNYREAYGIFACNGILFNHESPRRGENFVTRKITRAVGRIKIGLQS 240
           SPYAA+KCAAHWYTVNYREAYG+FACNGILFNHESPRRGENFVTRKITRAVGRIKIGLQS
Sbjct: 181 SPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRAVGRIKIGLQS 240

Query: 241 KLFLGNLQASRDWGFAGDYVEAMWMMLQQDQPDDYVVATEESHTVEEFLEVAFGYVGLNW 300
           KLFLGNLQASRDWGFAGDYVEAMWMMLQQ++PDDYVVATEESHTVEEFLEVAFGYVGLNW
Sbjct: 241 KLFLGNLQASRDWGFAGDYVEAMWMMLQQEKPDDYVVATEESHTVEEFLEVAFGYVGLNW 300

Query: 301 KDHVVIDKRYFRPTEVDNLKGDASKAKKVLGWKPKVGFEKLVKMMVDEDVEMAKREKVLV 360
           +DHVVIDKRYFRP EVDNLKGDASKAKKVLGWKP VGFEKLVKMMVDED+E+AKREKVLV
Sbjct: 301 RDHVVIDKRYFRPAEVDNLKGDASKAKKVLGWKPNVGFEKLVKMMVDEDIELAKREKVLV 360

Query: 361 DAGYMDAQQQP 372
           DAGYMDAQQQP
Sbjct: 361 DAGYMDAQQQP 371

[Close]
BLAST of Cp4.1LG01g06730 vs. NCBI nr
Match: gi|697160254|ref|XP_009588908.1| (PREDICTED: GDP-mannose 4,6 dehydratase 1 [Nicotiana tomentosiformis])

HSP 1 Score: 687.6 bits (1773), Expect = 1.2e-194
Identity = 332/348 (95.40%), Postives = 345/348 (99.14%), Query Frame = 1 

Query: 24  KRRTALITGITGQDGSYLTEFLLDKGYEVHGLIRRSSNFNTQRINHIYIDPHNVHKARMK 83
           +R+ ALITGITGQDGSYLTEFLLDKGYEVHGLIRRSSNFNTQR+NHIYIDPHNVHKARMK
Sbjct: 20  RRKVALITGITGQDGSYLTEFLLDKGYEVHGLIRRSSNFNTQRVNHIYIDPHNVHKARMK 79

Query: 84  LHYADLTDASSLRRWLDTILPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRS 143
           LHYAD+TDASSLRRWLDTILPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRS
Sbjct: 80  LHYADVTDASSLRRWLDTILPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRS 139

Query: 144 HIAATGRSHIRYYQAGSSEMFGSTPPPQLETTPFHPRSPYAAAKCAAHWYTVNYREAYGI 203
           HI+ATGRSHIRYYQAGSSEMFGSTPPPQ ETTPFHPRSPYA +KCAAHWYTVNYREAYGI
Sbjct: 140 HISATGRSHIRYYQAGSSEMFGSTPPPQSETTPFHPRSPYAVSKCAAHWYTVNYREAYGI 199

Query: 204 FACNGILFNHESPRRGENFVTRKITRAVGRIKIGLQSKLFLGNLQASRDWGFAGDYVEAM 263
           FACNGILFNHESPRRGENFVTRKITRAVGRIKIGLQSKLFLGNLQASRDWGFAGDYVEAM
Sbjct: 200 FACNGILFNHESPRRGENFVTRKITRAVGRIKIGLQSKLFLGNLQASRDWGFAGDYVEAM 259

Query: 264 WMMLQQDQPDDYVVATEESHTVEEFLEVAFGYVGLNWKDHVVIDKRYFRPTEVDNLKGDA 323
           WMMLQQ++PDDYVVATEESHTVEEFLEVAFGYVGLNWKDHVVIDKRYFRPTEVDNLKGD+
Sbjct: 260 WMMLQQEKPDDYVVATEESHTVEEFLEVAFGYVGLNWKDHVVIDKRYFRPTEVDNLKGDS 319

Query: 324 SKAKKVLGWKPKVGFEKLVKMMVDEDVEMAKREKVLVDAGYMDAQQQP 372
           SKA+KVLGWKP+VGFE+LVKMMVDEDVE+AKREKVLVDAGYMDAQQQP
Sbjct: 320 SKARKVLGWKPRVGFEQLVKMMVDEDVELAKREKVLVDAGYMDAQQQP 367

[Close]
BLAST of Cp4.1LG01g06730 vs. NCBI nr
Match: gi|698497296|ref|XP_009794637.1| (PREDICTED: GDP-mannose 4,6 dehydratase 1 [Nicotiana sylvestris])

HSP 1 Score: 686.4 bits (1770), Expect = 2.7e-194
Identity = 331/349 (94.84%), Postives = 345/349 (98.85%), Query Frame = 1 

Query: 23  EKRRTALITGITGQDGSYLTEFLLDKGYEVHGLIRRSSNFNTQRINHIYIDPHNVHKARM 82
           ++R+ ALITGITGQDGSYLTEFLLDKGYEVHGLIRRSSNFNTQR+NHIYIDPHNVHKARM
Sbjct: 19  DRRKVALITGITGQDGSYLTEFLLDKGYEVHGLIRRSSNFNTQRVNHIYIDPHNVHKARM 78

Query: 83  KLHYADLTDASSLRRWLDTILPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVR 142
           KLHYAD+TDASSLRRWLDTILPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVR
Sbjct: 79  KLHYADVTDASSLRRWLDTILPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVR 138

Query: 143 SHIAATGRSHIRYYQAGSSEMFGSTPPPQLETTPFHPRSPYAAAKCAAHWYTVNYREAYG 202
           SHI+ATGRSHIRYYQAGSSEMFGSTPPPQ ETTPFHPRSPYA +KCAAHWYTVNYREAYG
Sbjct: 139 SHISATGRSHIRYYQAGSSEMFGSTPPPQSETTPFHPRSPYAVSKCAAHWYTVNYREAYG 198

Query: 203 IFACNGILFNHESPRRGENFVTRKITRAVGRIKIGLQSKLFLGNLQASRDWGFAGDYVEA 262
           IFACNGILFNHESPRRGENFVTRKITRAVGRIKIGLQSKLFLGNLQASRDWGFAGDYVEA
Sbjct: 199 IFACNGILFNHESPRRGENFVTRKITRAVGRIKIGLQSKLFLGNLQASRDWGFAGDYVEA 258

Query: 263 MWMMLQQDQPDDYVVATEESHTVEEFLEVAFGYVGLNWKDHVVIDKRYFRPTEVDNLKGD 322
           MWMMLQQ++PDDYVVATEESHTVEEFLEVAFGYVGLNWKDHVVIDKRYFRPTEVDNLKGD
Sbjct: 259 MWMMLQQEKPDDYVVATEESHTVEEFLEVAFGYVGLNWKDHVVIDKRYFRPTEVDNLKGD 318

Query: 323 ASKAKKVLGWKPKVGFEKLVKMMVDEDVEMAKREKVLVDAGYMDAQQQP 372
           +SKA+ VLGWKP+VGFE+LVKMMVDEDVE+AKREKVLVDAGYMDAQQQP
Sbjct: 319 SSKARNVLGWKPRVGFEQLVKMMVDEDVELAKREKVLVDAGYMDAQQQP 367

The following BLAST results are available for this feature:
BLAST of Cp4.1LG01g06730 vs. Swiss-Prot
Match NameE-valueIdentityDescription
GMD1_ARATH2.2e-18388.76GDP-mannose 4,6 dehydratase 1 OS=Arabidopsis thaliana GN=GMD1 PE=1 SV=1[more]
GMD2_ARATH3.7e-18384.76GDP-mannose 4,6 dehydratase 2 OS=Arabidopsis thaliana GN=MUR1 PE=1 SV=3[more]
GMDS_MOUSE1.1e-10554.89GDP-mannose 4,6 dehydratase OS=Mus musculus GN=Gmds PE=1 SV=1[more]
GMDS_CRIGR1.1e-10554.89GDP-mannose 4,6 dehydratase OS=Cricetulus griseus GN=GMDS PE=2 SV=1[more]
GM4D_ECO571.4e-10553.41GDP-mannose 4,6-dehydratase OS=Escherichia coli O157:H7 GN=gmd PE=3 SV=1[more]
BLAST of Cp4.1LG01g06730 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KY32_CUCSA1.3e-20395.42GDP-mannose 4,6-dehydratase OS=Cucumis sativus GN=Csa_4G046810 PE=3 SV=1[more]
A0A059AI89_EUCGR3.5e-19690.84Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J02407 PE=3 SV=1[more]
E0D359_TOBAC7.2e-19494.56GDP-mannose 4,6-dehydratase OS=Nicotiana tabacum GN=GMD PE=2 SV=1[more]
V4UHF1_9ROSI2.1e-19390.84Uncharacterized protein OS=Citrus clementina GN=CICLE_v10025903mg PE=3 SV=1[more]
B7XH28_NICBE2.8e-19393.98GDP-mannose 4,6-dehydratase OS=Nicotiana benthamiana GN=GMD PE=2 SV=2[more]
BLAST of Cp4.1LG01g06730 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G66280.11.2e-18488.76 GDP-D-mannose 4,6-dehydratase 1[more]
AT3G51160.12.1e-18484.76 NAD(P)-binding Rossmann-fold superfamily protein[more]
AT2G47650.25.8e-0924.36 UDP-xylose synthase 4[more]
AT3G62830.12.9e-0823.65 NAD(P)-binding Rossmann-fold superfamily protein[more]
AT2G28760.23.2e-0723.95 UDP-XYL synthase 6[more]
BLAST of Cp4.1LG01g06730 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659102322|ref|XP_008452068.1|6.5e-20495.69PREDICTED: GDP-mannose 4,6 dehydratase 1 [Cucumis melo][more]
gi|778690764|ref|XP_011653164.1|1.9e-20395.42PREDICTED: GDP-mannose 4,6 dehydratase 1 [Cucumis sativus][more]
gi|702482235|ref|XP_010033470.1|5.0e-19690.84PREDICTED: GDP-mannose 4,6 dehydratase 1 [Eucalyptus grandis][more]
gi|697160254|ref|XP_009588908.1|1.2e-19495.40PREDICTED: GDP-mannose 4,6 dehydratase 1 [Nicotiana tomentosiformis][more]
gi|698497296|ref|XP_009794637.1|2.7e-19494.84PREDICTED: GDP-mannose 4,6 dehydratase 1 [Nicotiana sylvestris][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0019673GDP-mannose metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0008446GDP-mannose 4,6-dehydratase activity
Vocabulary: INTERPRO
TermDefinition
IPR016040NAD(P)-bd_dom
IPR006368GDP_Man_deHydtase
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006000 fructose metabolic process
biological_process GO:0006012 galactose metabolic process
biological_process GO:0009298 GDP-mannose biosynthetic process
biological_process GO:0019673 GDP-mannose metabolic process
cellular_component GO:0005575 cellular_component
molecular_function GO:0008446 GDP-mannose 4,6-dehydratase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g06730.1Cp4.1LG01g06730.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006368GDP-mannose 4,6-dehydrataseHAMAPMF_00955GDP_Man_dehydratasecoord: 26..355
score: 56
IPR006368GDP-mannose 4,6-dehydrataseTIGRFAMsTIGR01472TIGR01472coord: 27..352
score: 2.4E
IPR016040NAD(P)-binding domainGENE3DG3DSA:3.40.50.720coord: 27..226
score: 9.4
IPR016040NAD(P)-binding domainPFAMPF16363GDP_Man_Dehydcoord: 29..345
score: 6.2E
IPR016040NAD(P)-binding domainunknownSSF51735NAD(P)-binding Rossmann-fold domainscoord: 26..351
score: 2.72
NoneNo IPR availableGENE3DG3DSA:3.90.25.10coord: 227..360
score: 4.8
NoneNo IPR availablePANTHERPTHR10366NAD DEPENDENT EPIMERASE/DEHYDRATASEcoord: 27..371
score: 4.3E
NoneNo IPR availablePANTHERPTHR10366:SF346GDP-MANNOSE 4,6 DEHYDRATASE 1-RELATEDcoord: 27..371
score: 4.3E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG01g06730Cucsa.106600Cucumber (Gy14) v1cgycpeB0238
Cp4.1LG01g06730CmaCh16G006110Cucurbita maxima (Rimu)cmacpeB354
Cp4.1LG01g06730CmaCh04G007510Cucurbita maxima (Rimu)cmacpeB731
Cp4.1LG01g06730CmoCh04G008000Cucurbita moschata (Rifu)cmocpeB684
Cp4.1LG01g06730CmoCh16G006670Cucurbita moschata (Rifu)cmocpeB316
Cp4.1LG01g06730Cla014592Watermelon (97103) v1cpewmB420
Cp4.1LG01g06730Csa4G046810Cucumber (Chinese Long) v2cpecuB400
Cp4.1LG01g06730MELO3C016378Melon (DHL92) v3.5.1cpemeB424
Cp4.1LG01g06730ClCG07G008430Watermelon (Charleston Gray)cpewcgB412
Cp4.1LG01g06730CSPI04G05580Wild cucumber (PI 183967)cpecpiB397
Cp4.1LG01g06730Lsi07G002620Bottle gourd (USVL1VR-Ls)cpelsiB373
Cp4.1LG01g06730MELO3C032603.2Melon (DHL92) v3.6.1cpemedB496
Cp4.1LG01g06730CsaV3_4G005740Cucumber (Chinese Long) v3cpecucB0497
Cp4.1LG01g06730Bhi01G001843Wax gourdcpewgoB0510
Cp4.1LG01g06730CsGy4G005460Cucumber (Gy14) v2cgybcpeB502
Cp4.1LG01g06730Carg05734Silver-seed gourdcarcpeB1418
Cp4.1LG01g06730Carg14149Silver-seed gourdcarcpeB1303
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG01g06730Cp4.1LG14g01840Cucurbita pepo (Zucchini)cpecpeB237
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG01g06730Watermelon (97103) v1cpewmB443
Cp4.1LG01g06730Melon (DHL92) v3.5.1cpemeB434
Cp4.1LG01g06730Cucumber (Gy14) v2cgybcpeB807
Cp4.1LG01g06730Melon (DHL92) v3.6.1cpemedB510
Cp4.1LG01g06730Silver-seed gourdcarcpeB1302
Cp4.1LG01g06730Silver-seed gourdcarcpeB1417
Cp4.1LG01g06730Cucumber (Chinese Long) v3cpecucB0580
Cp4.1LG01g06730Wax gourdcpewgoB0511
Cp4.1LG01g06730Cucurbita pepo (Zucchini)cpecpeB073
Cp4.1LG01g06730Cucurbita pepo (Zucchini)cpecpeB233
Cp4.1LG01g06730Cucurbita pepo (Zucchini)cpecpeB385
Cp4.1LG01g06730Cucurbita maxima (Rimu)cmacpeB350
Cp4.1LG01g06730Cucurbita maxima (Rimu)cmacpeB720
Cp4.1LG01g06730Cucurbita maxima (Rimu)cmacpeB876
Cp4.1LG01g06730Cucurbita moschata (Rifu)cmocpeB312
Cp4.1LG01g06730Cucurbita moschata (Rifu)cmocpeB613
Cp4.1LG01g06730Cucurbita moschata (Rifu)cmocpeB673
Cp4.1LG01g06730Cucurbita moschata (Rifu)cmocpeB813
Cp4.1LG01g06730Wild cucumber (PI 183967)cpecpiB468
Cp4.1LG01g06730Watermelon (Charleston Gray)cpewcgB374