Lsi06G012880 (gene) Bottle gourd (USVL1VR-Ls)

NameLsi06G012880
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionPentatricopeptide repeat-containing protein, putative
Locationchr06 : 23440807 .. 23442906 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTTCGCGCGGCCCACCGATCACTCTCGATCAAAATCGTTTCCATTACGTCATCGATCTCGATTTTCTTCACCAGAACCGCCAATTTCCTGCGGCACCAGCCGGAAAATGGATCGGACGTCCGAGAATGGTCACCGGAAGAGAGCGTCGCCGACGTGTCTTACTGGACGAAGAAGGTTCACGGCCTCTGTACCAAGGATCGAAACGTCGATGAAGCGCTTCGGCTACTCGACGCTCTCCGCCTTCACGGCTACCAATTGCACCCTCTCAATCTCGGTAGCATAATCCATGGTCTCTCTGATGCCCGCCGGTTCCATGAAGCGCACTGCCGTTTTATGCTCTCTGTTGCTTCTCGGTGTGTGCCTGATGAACGGACTTGTAATGTTCTTCTTGCTCGTTTGCTTGATTATCGATCTCCGTATTGCACCTTGCGCTTGCTTGTTTGTTTGTTTGACGCTAAGCCTGAGTTTGTTCCTTCTATAGTGAATTATAATCGCTTGATTGATCAGTTTTGTTCGTTTTCACTACCGAATGTAGCTCATAGGGTTTTATTTGATATGAAGAGTAGAGGGCATTGTCCAAATGTTGTTTCCTATACTGCCTTGATTGATGGATACAGCCGTGTTGGTAATGTATCTGCTGCCGAGAAACTGTTTGACGAAATGCCTGAGAATGATGTGGAGCCTAATTCACTTACATACAGTGTGTTAATTCATGGGTTTCTTTACAAGCGGGATTTTGAAACTGGGAAGGCGTTGATGTGCAAGCTTTGGGAGAGGATGAAGGGTGAAATTGACTCCTCTGTGAAGAGTGCAGCTTTTGCCCATCTTGTTGATTCTTTGTGTCTGGCTGGTTCTTTCCACGAGGTGTTTTTAATTGCAGAAGATATGCCGCAGGGGCAGAGTGTCCCCGAGGAATTTGCCTATGGGCAGATGATAGATTCACTTTGTAAAGCGAAAAGACATCATGGGGCCTCAAGAATTGTGTATATAATGAGGAAGAAAGGGATTAATCCTGGTTTGTTATCATATAATTCTATTATCCATGGGCTTAGCAAGGAGGGAAGTTGTATGCGGGCTTATCAGTTGTTAGTAGAAGGAGTTGAATTTGGGTACTCACCATCTGAACATACATATAAGGTTCTTTTAGAATGTCTTTGCAAAGAGCTAGACATCCAAAAGGCTAAGGAAGTTCTTCAAATAATGATAGAGAAGGAAGGCGTGGATAGAACTAGAATTTACAACATATACTTGAGAGCTGTCTGCCTAACAAATAACTCAACTGAGCTCTTAAATACGCTTGTTGTAATGCTTCAAACTAATTGTCACCCTGATGTCATTACCCTCAATACAGTCATCAAGGGATTTTGCAAGGTTGGAAGCATTGAAGAAGCTCTAAAGGTATTAAACGATATGATGATTGGTAAATTCTGTACCCCTGATTGTGTGACCTTCACAACTATTATATGTGGCTTACTGAATGTTGGGAGGATCCGGGAATCTCTTGATATATTGTATAAAGTAATGCCAGAAAAAGGCATGGTGCCAGGCGTTATTACATATAATGCCACTATTCGAGGCTTGTTTAAACTTCAACAGGCAAACCAAGCAATGGATACCTTTGACAGAATGGTTAGAAATGGCATCCAAGCTGACAGTACTACTTACGCTGTGATAATTGATGGGTTGTGTGGTTCCAATAAAATTGAAGAAGTTAAGAGATTCTGGAAAGATATAGTCTGGCCATCAAAGATTCACGATAGTTTTGTTTATTCTGCTATTCTAAAAGGGCTTTGCCACTCCAGCAAATTTAACGAAGCTTGCCATTTCCTATATGAACTAGCAGATTCAGGGGTTTATCCAAGTATCTTTTGCTACAATATTGTGATCAATACTGCCTGTAAGTTGGGATTAAAAGGAGAAGCATATCAACTGGTCACAGAGATGAGAAAGAATGGGTTAGCACCCGATGCCGTTACCTGGAGGATTCTTCACAAATTACATCAAAATGAGATGACACAATCTCTTCCCAAGGATTTAACTAACCAACCTAGAGATCGCTTGGACCAGACAGACTTGGAGAGAGATTCGCAAATGTAA

mRNA sequence

ATGTTTCGCGCGGCCCACCGATCACTCTCGATCAAAATCGTTTCCATTACGTCATCGATCTCGATTTTCTTCACCAGAACCGCCAATTTCCTGCGGCACCAGCCGGAAAATGGATCGGACGTCCGAGAATGGTCACCGGAAGAGAGCGTCGCCGACGTGTCTTACTGGACGAAGAAGGTTCACGGCCTCTGTACCAAGGATCGAAACGTCGATGAAGCGCTTCGGCTACTCGACGCTCTCCGCCTTCACGGCTACCAATTGCACCCTCTCAATCTCGGTAGCATAATCCATGGTCTCTCTGATGCCCGCCGGTTCCATGAAGCGCACTGCCGTTTTATGCTCTCTGTTGCTTCTCGGTGTGTGCCTGATGAACGGACTTGTAATGTTCTTCTTGCTCGTTTGCTTGATTATCGATCTCCGTATTGCACCTTGCGCTTGCTTGTTTGTTTGTTTGACGCTAAGCCTGAGTTTGTTCCTTCTATAGTGAATTATAATCGCTTGATTGATCAGTTTTGTTCGTTTTCACTACCGAATGTAGCTCATAGGGTTTTATTTGATATGAAGAGTAGAGGGCATTGTCCAAATGTTGTTTCCTATACTGCCTTGATTGATGGATACAGCCGTGTTGGTAATGTATCTGCTGCCGAGAAACTGTTTGACGAAATGCCTGAGAATGATGTGGAGCCTAATTCACTTACATACAGTGTGTTAATTCATGGGTTTCTTTACAAGCGGGATTTTGAAACTGGGAAGGCGTTGATGTGCAAGCTTTGGGAGAGGATGAAGGGTGAAATTGACTCCTCTGTGAAGAGTGCAGCTTTTGCCCATCTTGTTGATTCTTTGTGTCTGGCTGGTTCTTTCCACGAGGTGTTTTTAATTGCAGAAGATATGCCGCAGGGGCAGAGTGTCCCCGAGGAATTTGCCTATGGGCAGATGATAGATTCACTTTGTAAAGCGAAAAGACATCATGGGGCCTCAAGAATTGTGTATATAATGAGGAAGAAAGGGATTAATCCTGGTTTGTTATCATATAATTCTATTATCCATGGGCTTAGCAAGGAGGGAAGTTGTATGCGGGCTTATCAGTTGTTAGTAGAAGGAGTTGAATTTGGGTACTCACCATCTGAACATACATATAAGGTTCTTTTAGAATGTCTTTGCAAAGAGCTAGACATCCAAAAGGCTAAGGAAGTTCTTCAAATAATGATAGAGAAGGAAGGCGTGGATAGAACTAGAATTTACAACATATACTTGAGAGCTGTCTGCCTAACAAATAACTCAACTGAGCTCTTAAATACGCTTGTTGTAATGCTTCAAACTAATTGTCACCCTGATGTCATTACCCTCAATACAGTCATCAAGGGATTTTGCAAGGTTGGAAGCATTGAAGAAGCTCTAAAGGTATTAAACGATATGATGATTGGTAAATTCTGTACCCCTGATTGTGTGACCTTCACAACTATTATATGTGGCTTACTGAATGTTGGGAGGATCCGGGAATCTCTTGATATATTGTATAAAGTAATGCCAGAAAAAGGCATGGTGCCAGGCGTTATTACATATAATGCCACTATTCGAGGCTTGTTTAAACTTCAACAGGCAAACCAAGCAATGGATACCTTTGACAGAATGGTTAGAAATGGCATCCAAGCTGACAGTACTACTTACGCTGTGATAATTGATGGGTTGTGTGGTTCCAATAAAATTGAAGAAGTTAAGAGATTCTGGAAAGATATAGTCTGGCCATCAAAGATTCACGATAGTTTTGTTTATTCTGCTATTCTAAAAGGGCTTTGCCACTCCAGCAAATTTAACGAAGCTTGCCATTTCCTATATGAACTAGCAGATTCAGGGGTTTATCCAAGTATCTTTTGCTACAATATTGTGATCAATACTGCCTGTAAGTTGGGATTAAAAGGAGAAGCATATCAACTGGTCACAGAGATGAGAAAGAATGGGTTAGCACCCGATGCCGTTACCTGGAGGATTCTTCACAAATTACATCAAAATGAGATGACACAATCTCTTCCCAAGGATTTAACTAACCAACCTAGAGATCGCTTGGACCAGACAGACTTGGAGAGAGATTCGCAAATGTAA

Coding sequence (CDS)

ATGTTTCGCGCGGCCCACCGATCACTCTCGATCAAAATCGTTTCCATTACGTCATCGATCTCGATTTTCTTCACCAGAACCGCCAATTTCCTGCGGCACCAGCCGGAAAATGGATCGGACGTCCGAGAATGGTCACCGGAAGAGAGCGTCGCCGACGTGTCTTACTGGACGAAGAAGGTTCACGGCCTCTGTACCAAGGATCGAAACGTCGATGAAGCGCTTCGGCTACTCGACGCTCTCCGCCTTCACGGCTACCAATTGCACCCTCTCAATCTCGGTAGCATAATCCATGGTCTCTCTGATGCCCGCCGGTTCCATGAAGCGCACTGCCGTTTTATGCTCTCTGTTGCTTCTCGGTGTGTGCCTGATGAACGGACTTGTAATGTTCTTCTTGCTCGTTTGCTTGATTATCGATCTCCGTATTGCACCTTGCGCTTGCTTGTTTGTTTGTTTGACGCTAAGCCTGAGTTTGTTCCTTCTATAGTGAATTATAATCGCTTGATTGATCAGTTTTGTTCGTTTTCACTACCGAATGTAGCTCATAGGGTTTTATTTGATATGAAGAGTAGAGGGCATTGTCCAAATGTTGTTTCCTATACTGCCTTGATTGATGGATACAGCCGTGTTGGTAATGTATCTGCTGCCGAGAAACTGTTTGACGAAATGCCTGAGAATGATGTGGAGCCTAATTCACTTACATACAGTGTGTTAATTCATGGGTTTCTTTACAAGCGGGATTTTGAAACTGGGAAGGCGTTGATGTGCAAGCTTTGGGAGAGGATGAAGGGTGAAATTGACTCCTCTGTGAAGAGTGCAGCTTTTGCCCATCTTGTTGATTCTTTGTGTCTGGCTGGTTCTTTCCACGAGGTGTTTTTAATTGCAGAAGATATGCCGCAGGGGCAGAGTGTCCCCGAGGAATTTGCCTATGGGCAGATGATAGATTCACTTTGTAAAGCGAAAAGACATCATGGGGCCTCAAGAATTGTGTATATAATGAGGAAGAAAGGGATTAATCCTGGTTTGTTATCATATAATTCTATTATCCATGGGCTTAGCAAGGAGGGAAGTTGTATGCGGGCTTATCAGTTGTTAGTAGAAGGAGTTGAATTTGGGTACTCACCATCTGAACATACATATAAGGTTCTTTTAGAATGTCTTTGCAAAGAGCTAGACATCCAAAAGGCTAAGGAAGTTCTTCAAATAATGATAGAGAAGGAAGGCGTGGATAGAACTAGAATTTACAACATATACTTGAGAGCTGTCTGCCTAACAAATAACTCAACTGAGCTCTTAAATACGCTTGTTGTAATGCTTCAAACTAATTGTCACCCTGATGTCATTACCCTCAATACAGTCATCAAGGGATTTTGCAAGGTTGGAAGCATTGAAGAAGCTCTAAAGGTATTAAACGATATGATGATTGGTAAATTCTGTACCCCTGATTGTGTGACCTTCACAACTATTATATGTGGCTTACTGAATGTTGGGAGGATCCGGGAATCTCTTGATATATTGTATAAAGTAATGCCAGAAAAAGGCATGGTGCCAGGCGTTATTACATATAATGCCACTATTCGAGGCTTGTTTAAACTTCAACAGGCAAACCAAGCAATGGATACCTTTGACAGAATGGTTAGAAATGGCATCCAAGCTGACAGTACTACTTACGCTGTGATAATTGATGGGTTGTGTGGTTCCAATAAAATTGAAGAAGTTAAGAGATTCTGGAAAGATATAGTCTGGCCATCAAAGATTCACGATAGTTTTGTTTATTCTGCTATTCTAAAAGGGCTTTGCCACTCCAGCAAATTTAACGAAGCTTGCCATTTCCTATATGAACTAGCAGATTCAGGGGTTTATCCAAGTATCTTTTGCTACAATATTGTGATCAATACTGCCTGTAAGTTGGGATTAAAAGGAGAAGCATATCAACTGGTCACAGAGATGAGAAAGAATGGGTTAGCACCCGATGCCGTTACCTGGAGGATTCTTCACAAATTACATCAAAATGAGATGACACAATCTCTTCCCAAGGATTTAACTAACCAACCTAGAGATCGCTTGGACCAGACAGACTTGGAGAGAGATTCGCAAATGTAA

Protein sequence

MFRAAHRSLSIKIVSITSSISIFFTRTANFLRHQPENGSDVREWSPEESVADVSYWTKKVHGLCTKDRNVDEALRLLDALRLHGYQLHPLNLGSIIHGLSDARRFHEAHCRFMLSVASRCVPDERTCNVLLARLLDYRSPYCTLRLLVCLFDAKPEFVPSIVNYNRLIDQFCSFSLPNVAHRVLFDMKSRGHCPNVVSYTALIDGYSRVGNVSAAEKLFDEMPENDVEPNSLTYSVLIHGFLYKRDFETGKALMCKLWERMKGEIDSSVKSAAFAHLVDSLCLAGSFHEVFLIAEDMPQGQSVPEEFAYGQMIDSLCKAKRHHGASRIVYIMRKKGINPGLLSYNSIIHGLSKEGSCMRAYQLLVEGVEFGYSPSEHTYKVLLECLCKELDIQKAKEVLQIMIEKEGVDRTRIYNIYLRAVCLTNNSTELLNTLVVMLQTNCHPDVITLNTVIKGFCKVGSIEEALKVLNDMMIGKFCTPDCVTFTTIICGLLNVGRIRESLDILYKVMPEKGMVPGVITYNATIRGLFKLQQANQAMDTFDRMVRNGIQADSTTYAVIIDGLCGSNKIEEVKRFWKDIVWPSKIHDSFVYSAILKGLCHSSKFNEACHFLYELADSGVYPSIFCYNIVINTACKLGLKGEAYQLVTEMRKNGLAPDAVTWRILHKLHQNEMTQSLPKDLTNQPRDRLDQTDLERDSQM
BLAST of Lsi06G012880 vs. Swiss-Prot
Match: PP240_ARATH (Pentatricopeptide repeat-containing protein At3g18020 OS=Arabidopsis thaliana GN=At3g18020 PE=2 SV=1)

HSP 1 Score: 768.5 bits (1983), Expect = 6.5e-221
Identity = 373/669 (55.75%), Postives = 486/669 (72.65%), Query Frame = 1

Query: 23  FFTRTANF-----LRHQPENGSD--VREWSPEESVADVSYWTKKVHGLCTKDRNVDEALR 82
           FF+++ +F     L+     G D  +       SV D +YW +++H +C   RN DEALR
Sbjct: 17  FFSKSLSFSSASVLKSDDVEGEDDAIEAEDRRRSVTDRAYWRRRIHSICAVRRNPDEALR 76

Query: 83  LLDALRLHGYQLHPLNLGSIIHGLSDARRFHEAHCRFMLSVASRCVPDERTCNVLLARLL 142
           +LD L L GY+   LNL S+IH L DA RF EAH RF+L +AS  +PDERTCNV++ARLL
Sbjct: 77  ILDGLCLRGYRPDSLNLSSVIHSLCDAGRFDEAHRRFLLFLASGFIPDERTCNVIIARLL 136

Query: 143 DYRSPYCTLRLLVCLFDAKPEFVPSIVNYNRLIDQFCSFSLPNVAHRVLFDMKSRGHCPN 202
             RSP  TL ++  L   K EFVPS+ NYNRL++Q C+      AH+++FDM++RGH P+
Sbjct: 137 YSRSPVSTLGVIHRLIGFKKEFVPSLTNYNRLMNQLCTIYRVIDAHKLVFDMRNRGHLPD 196

Query: 203 VVSYTALIDGYSRVGNVSAAEKLFDEMPENDVEPNSLTYSVLIHGFLYKRDFETGKALMC 262
           VV++T LI GY  +  +  A K+FDEM    + PNSLT SVLI GFL  RD ETG+ LM 
Sbjct: 197 VVTFTTLIGGYCEIRELEVAHKVFDEMRVCGIRPNSLTLSVLIGGFLKMRDVETGRKLMK 256

Query: 263 KLWERMKGEIDSSVKSAAFAHLVDSLCLAGSFHEVFLIAEDMPQGQSVPEEFAYGQMIDS 322
           +LWE MK E D+S+K+AAFA+LVDS+C  G F+++F IAE+M   +SV  EFAYG MIDS
Sbjct: 257 ELWEYMKNETDTSMKAAAFANLVDSMCREGYFNDIFEIAENMSLCESVNVEFAYGHMIDS 316

Query: 323 LCKAKRHHGASRIVYIMRKKGINPGLLSYNSIIHGLSKEGSCMRAYQLLVEGVEFGYSPS 382
           LC+ +R+HGA+RIVYIM+ KG+ P   SYN+IIHGL K+G CMRAYQLL EG EF + PS
Sbjct: 317 LCRYRRNHGAARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPS 376

Query: 383 EHTYKVLLECLCKELDIQKAKEVLQIMIEKEGVDRTRIYNIYLRAVCLTNNSTELLNTLV 442
           E+TYK+L+E LCKELD  KA+ VL++M+ KEG DRTRIYNIYLR +C+ +N TE+LN LV
Sbjct: 377 EYTYKLLMESLCKELDTGKARNVLELMLRKEGADRTRIYNIYLRGLCVMDNPTEILNVLV 436

Query: 443 VMLQTNCHPDVITLNTVIKGFCKVGSIEEALKVLNDMMIGKFCTPDCVTFTTIICGLLNV 502
            MLQ +C PD  TLNTVI G CK+G +++A+KVL+DMM GKFC PD VT  T++CGLL  
Sbjct: 437 SMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQ 496

Query: 503 GRIRESLDILYKVMPEKGMVPGVITYNATIRGLFKLQQANQAMDTFDRMVRNGIQADSTT 562
           GR  E+LD+L +VMPE  + PGV+ YNA IRGLFKL + ++AM  F ++ +  + ADSTT
Sbjct: 497 GRAEEALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTT 556

Query: 563 YAVIIDGLCGSNKIEEVKRFWKDIVWPSKIHDSFVYSAILKGLCHSSKFNEACHFLYELA 622
           YA+IIDGLC +NK++  K+FW D++WPS  HD+FVY+A LKGLC S   ++ACHFLY+LA
Sbjct: 557 YAIIIDGLCVTNKVDMAKKFWDDVIWPSGRHDAFVYAAFLKGLCQSGYLSDACHFLYDLA 616

Query: 623 DSGVYPSIFCYNIVINTACKLGLKGEAYQLVTEMRKNGLAPDAVTWRILHKLHQNEMTQS 682
           DSG  P++ CYN VI    + GLK EAYQ++ EMRKNG APDAVTWRIL KLH + M  +
Sbjct: 617 DSGAIPNVVCYNTVIAECSRSGLKREAYQILEEMRKNGQAPDAVTWRILDKLH-DSMDLT 676

Query: 683 LPKDLTNQP 685
           + ++L + P
Sbjct: 677 VERELISNP 684

BLAST of Lsi06G012880 vs. Swiss-Prot
Match: PPR91_ARATH (Pentatricopeptide repeat-containing protein At1g62670, mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=3 SV=2)

HSP 1 Score: 232.3 bits (591), Expect = 1.7e-59
Identity = 146/513 (28.46%), Postives = 249/513 (48.54%), Query Frame = 1

Query: 164 YNRLIDQFCSFSLPNVAHRVLFDMKSRGHCPNVVSYTALIDGYSRVGNVSAAEKLFDEMP 223
           Y+ LI+ FC  S   +A  VL  M   G+ PN+V+ ++L++GY     +S A  L D+M 
Sbjct: 119 YSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMF 178

Query: 224 ENDVEPNSLTYSVLIHGFLYKRDFETGKALMCKLWERMKGEIDSSVKSAAFAHLVDSLCL 283
               +PN++T++ LIHG           AL+    +RM  +         +  +V+ LC 
Sbjct: 179 VTGYQPNTVTFNTLIHGLFLHNKASEAMALI----DRMVAK-GCQPDLVTYGVVVNGLCK 238

Query: 284 AGSFHEVFLIAEDMPQGQSVPEEFAYGQMIDSLCKAKRHHGASRIVYIMRKKGINPGLLS 343
            G     F +   M QG+  P    Y  +ID LCK K    A  +   M  KGI P +++
Sbjct: 239 RGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVT 298

Query: 344 YNSIIHGLSKEGSCMRAYQLLVEGVEFGYSPSEHTYKVLLECLCKELDIQKAKEVLQIMI 403
           Y+S+I  L   G    A +LL + +E   +P   T+  L++   KE  + +A+++   M+
Sbjct: 299 YSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMV 358

Query: 404 EKEGVDRTRIYNIYLRAVCLTNNSTELLNTLVVMLQTNCHPDVITLNTVIKGFCKVGSIE 463
           ++        Y+  +   C+ +   E       M+  +C PDV+T NT+IKGFCK   +E
Sbjct: 359 KRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVE 418

Query: 464 EALKVLNDMMIGKFCTPDCVTFTTIICGLLNVGRIRESLDILYKVMPEKGMVPGVITYNA 523
           E ++V  +M   +    + VT+  +I GL   G    + +I +K M   G+ P ++TYN 
Sbjct: 419 EGMEVFREMS-QRGLVGNTVTYNILIQGLFQAGDCDMAQEI-FKEMVSDGVPPNIMTYNT 478

Query: 524 TIRGLFKLQQANQAMDTFDRMVRNGIQADSTTYAVIIDGLCGSNKIEEVKRFWKDIVWPS 583
            + GL K  +  +AM  F+ + R+ ++    TY ++I+G+C + K+E+    + ++    
Sbjct: 479 LLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKG 538

Query: 584 KIHDSFVYSAILKGLCHSSKFNEACHFLYELADSGVYPSIFCYNIVINTACKLGLKGEAY 643
              D   Y+ ++ G C      EA     E+ + G  P+  CYN +I    + G +  + 
Sbjct: 539 VKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASA 598

Query: 644 QLVTEMRKNGLAPDAVT-WRILHKLHQNEMTQS 676
           +L+ EMR  G A DA T   + + LH   + +S
Sbjct: 599 ELIKEMRSCGFAGDASTIGLVTNMLHDGRLDKS 624

BLAST of Lsi06G012880 vs. Swiss-Prot
Match: PP445_ARATH (Pentatricopeptide repeat-containing protein At5g65560 OS=Arabidopsis thaliana GN=At5g65560 PE=2 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 2.0e-57
Identity = 145/527 (27.51%), Postives = 263/527 (49.91%), Query Frame = 1

Query: 164 YNRLIDQFCSFSLPNVAHRVLFDMKSRGHCPNVVSYTALIDGYSRVGNVSAAEKLFDEMP 223
           YN L++    F L +   +V  +M     CPN+ +Y  +++GY ++GNV  A +   ++ 
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245

Query: 224 ENDVEPNSLTYSVLIHGFLYKRDFETGKALMCKLWERMKGEIDSSVKSAAFAHLVDSLCL 283
           E  ++P+  TY+ LI G+  ++D ++   +  ++   +KG   + V   A+ HL+  LC+
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEM--PLKGCRRNEV---AYTHLIHGLCV 305

Query: 284 AGSFHEVFLIAEDMPQGQSVPEEFAYGQMIDSLCKAKRHHGASRIVYIMRKKGINPGLLS 343
           A    E   +   M   +  P    Y  +I SLC ++R   A  +V  M + GI P + +
Sbjct: 306 ARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHT 365

Query: 344 YNSIIHGLSKEGSCMRAYQLLVEGVEFGYSPSEHTYKVLLECLCKELDIQKAKEVLQIMI 403
           Y  +I  L  +    +A +LL + +E G  P+  TY  L+   CK   I+ A +V+++M 
Sbjct: 366 YTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELME 425

Query: 404 EKEGVDRTRIYNIYLRAVCLTNNSTELLNTLVVMLQTNCHPDVITLNTVIKGFCKVGSIE 463
            ++    TR YN  ++  C  +N  + +  L  ML+    PDV+T N++I G C+ G+ +
Sbjct: 426 SRKLSPNTRTYNELIKGYC-KSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFD 485

Query: 464 EALKVLNDMMIGKFCTPDCVTFTTIICGLLNVGRIRESLDILYKVMPEKGMVPGVITYNA 523
            A ++L+ +M  +   PD  T+T++I  L    R+ E+ D L+  + +KG+ P V+ Y A
Sbjct: 486 SAYRLLS-LMNDRGLVPDQWTYTSMIDSLCKSKRVEEACD-LFDSLEQKGVNPNVVMYTA 545

Query: 524 TIRGLFKLQQANQAMDTFDRMVRNGIQADSTTYAVIIDGLCGSNKIEEV----KRFWKDI 583
            I G  K  + ++A    ++M+      +S T+  +I GLC   K++E     ++  K  
Sbjct: 546 LIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIG 605

Query: 584 VWPSKIHDSFVYSAILKGLCHSSKFNEACHFLYELADSGVYPSIFCYNIVINTACKLGLK 643
           + P+   D+ +   +LK       F+ A     ++  SG  P    Y   I T C+ G  
Sbjct: 606 LQPTVSTDTILIHRLLK----DGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRL 665

Query: 644 GEAYQLVTEMRKNGLAPDAVTWRILHKLHQNEMTQSLPKDLTNQPRD 687
            +A  ++ +MR+NG++PD  T+  L K + +    +   D+  + RD
Sbjct: 666 LDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRD 700

BLAST of Lsi06G012880 vs. Swiss-Prot
Match: PPR96_ARATH (Pentatricopeptide repeat-containing protein At1g62930, chloroplastic OS=Arabidopsis thaliana GN=At1g62930 PE=2 SV=2)

HSP 1 Score: 223.8 bits (569), Expect = 5.9e-57
Identity = 138/516 (26.74%), Postives = 255/516 (49.42%), Query Frame = 1

Query: 161 IVNYNRLIDQFCSFSLPNVAHRVLFDMKSRGHCPNVVSYTALIDGYSRVGNVSAAEKLFD 220
           + +YN LI+ FC  S   +A  VL  M   G+ P++V+ ++L++GY     +S A  L D
Sbjct: 115 LYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVD 174

Query: 221 EMPENDVEPNSLTYSVLIHGFLYKRDFETGKALMCKLWERMKGEIDSSVKSAAFAHLVDS 280
           +M   + +PN++T++ LIHG           AL+ ++  R             +  +V+ 
Sbjct: 175 QMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAR-----GCQPDLFTYGTVVNG 234

Query: 281 LCLAGSFHEVFLIAEDMPQGQSVPEEFAYGQMIDSLCKAKRHHGASRIVYIMRKKGINPG 340
           LC  G       + + M +G+   +   Y  +ID+LC  K  + A  +   M  KGI P 
Sbjct: 235 LCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPN 294

Query: 341 LLSYNSIIHGLSKEGSCMRAYQLLVEGVEFGYSPSEHTYKVLLECLCKELDIQKAKEVLQ 400
           +++YNS+I  L   G    A +LL + +E   +P+  T+  L++   KE  + +A+++  
Sbjct: 295 VVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYD 354

Query: 401 IMIEKEGVDRTRIYNIYLRAVCLTNNSTELLNTLVVMLQTNCHPDVITLNTVIKGFCKVG 460
            MI++        Y+  +   C+ +   E  +   +M+  +C P+V+T NT+IKGFCK  
Sbjct: 355 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAK 414

Query: 461 SIEEALKVLNDMMIGKFCTPDCVTFTTIICGLLNVGRIRESLDILYKVMPEKGMVPGVIT 520
            +EE +++  +M   +    + VT+ T+I GL   G   +    ++K M   G+ P +IT
Sbjct: 415 RVEEGMELFREMS-QRGLVGNTVTYNTLIQGLFQAGDC-DMAQKIFKKMVSDGVPPDIIT 474

Query: 521 YNATIRGLFKLQQANQAMDTFDRMVRNGIQADSTTYAVIIDGLCGSNKIEEVKRFWKDIV 580
           Y+  + GL K  +  +A+  F+ + ++ ++ D  TY ++I+G+C + K+E+    +  + 
Sbjct: 475 YSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLS 534

Query: 581 WPSKIHDSFVYSAILKGLCHSSKFNEACHFLYELADSGVYPSIFCYNIVINTACKLGLKG 640
                 +  +Y+ ++ G C      EA     E+ + G  P+   YN +I    + G K 
Sbjct: 535 LKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKA 594

Query: 641 EAYQLVTEMRKNGLAPDAVT-WRILHKLHQNEMTQS 676
            + +L+ EMR  G   DA T   +++ LH   + +S
Sbjct: 595 ASAELIKEMRSCGFVGDASTISMVINMLHDGRLEKS 623

BLAST of Lsi06G012880 vs. Swiss-Prot
Match: PPR94_ARATH (Pentatricopeptide repeat-containing protein At1g62910 OS=Arabidopsis thaliana GN=At1g62910 PE=2 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 2.9e-56
Identity = 137/516 (26.55%), Postives = 255/516 (49.42%), Query Frame = 1

Query: 161 IVNYNRLIDQFCSFSLPNVAHRVLFDMKSRGHCPNVVSYTALIDGYSRVGNVSAAEKLFD 220
           +  Y+  I+ FC  S  ++A  VL  M   G+ P++V+ ++L++GY     +S A  L D
Sbjct: 118 LYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVD 177

Query: 221 EMPENDVEPNSLTYSVLIHGFLYKRDFETGKALMCKLWERMKGEIDSSVKSAAFAHLVDS 280
           +M E   +P++ T++ LIHG           AL+ ++ +R             +  +V+ 
Sbjct: 178 QMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQR-----GCQPDLVTYGTVVNG 237

Query: 281 LCLAGSFHEVFLIAEDMPQGQSVPEEFAYGQMIDSLCKAKRHHGASRIVYIMRKKGINPG 340
           LC  G       + + M +G+   +   Y  +ID LCK K    A  +   M  KGI P 
Sbjct: 238 LCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPD 297

Query: 341 LLSYNSIIHGLSKEGSCMRAYQLLVEGVEFGYSPSEHTYKVLLECLCKELDIQKAKEVLQ 400
           + +Y+S+I  L   G    A +LL + +E   +P+  T+  L++   KE  + +A+++  
Sbjct: 298 VFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYD 357

Query: 401 IMIEKEGVDRTRIYNIYLRAVCLTNNSTELLNTLVVMLQTNCHPDVITLNTVIKGFCKVG 460
            MI++        Y+  +   C+ +   E  +   +M+  +C P+V+T +T+IKGFCK  
Sbjct: 358 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAK 417

Query: 461 SIEEALKVLNDMMIGKFCTPDCVTFTTIICGLLNVGRIRESLDILYKVMPEKGMVPGVIT 520
            +EE +++  +M   +    + VT+TT+I G     R  ++  +++K M   G+ P ++T
Sbjct: 418 RVEEGMELFREMS-QRGLVGNTVTYTTLIHGFFQ-ARDCDNAQMVFKQMVSVGVHPNILT 477

Query: 521 YNATIRGLFKLQQANQAMDTFDRMVRNGIQADSTTYAVIIDGLCGSNKIEEVKRFWKDIV 580
           YN  + GL K  +  +AM  F+ + R+ ++ D  TY ++I+G+C + K+E+    + ++ 
Sbjct: 478 YNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLS 537

Query: 581 WPSKIHDSFVYSAILKGLCHSSKFNEACHFLYELADSGVYPSIFCYNIVINTACKLGLKG 640
                 +   Y+ ++ G C      EA   L ++ + G  P+   YN +I    + G + 
Sbjct: 538 LKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDRE 597

Query: 641 EAYQLVTEMRKNGLAPDAVT-WRILHKLHQNEMTQS 676
            + +L+ EMR  G A DA T   + + LH   + +S
Sbjct: 598 ASAELIKEMRSCGFAGDASTIGLVTNMLHDGRLDKS 626

BLAST of Lsi06G012880 vs. TrEMBL
Match: A0A0A0LV25_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G025030 PE=4 SV=1)

HSP 1 Score: 1268.4 bits (3281), Expect = 0.0e+00
Identity = 621/678 (91.59%), Postives = 643/678 (94.84%), Query Frame = 1

Query: 1   MFRAAHRSLSIKIVSITSSISIFFTRTANFLRHQPENGSDVREWSPEESVADVSYWTKKV 60
           MFRAAHRSLSIKIVSIT SISI FTRTANF R  PENGSD REW+PEESVADVSYWTKK+
Sbjct: 1   MFRAAHRSLSIKIVSITPSISILFTRTANFQRLHPENGSDSREWAPEESVADVSYWTKKI 60

Query: 61  HGLCTKDRNVDEALRLLDALRLHGYQLHPLNLGSIIHGLSDARRFHEAHCRFMLSVASRC 120
           HGLCTKDRNVDEAL+LLDALRLHGYQ HPLNL S+IHGL DA RFHEAHCRFMLS+ASRC
Sbjct: 61  HGLCTKDRNVDEALQLLDALRLHGYQFHPLNLASVIHGLCDAHRFHEAHCRFMLSIASRC 120

Query: 121 VPDERTCNVLLARLLDYRSPYCTLRLLVCLFDAKPEFVPSIVNYNRLIDQFCSFSLPNVA 180
           VPDERTCNVL+ARLLDYRSPYCTLRLLVCLFDAKPEFVPSIVNYNRLIDQFCSFSLPNVA
Sbjct: 121 VPDERTCNVLIARLLDYRSPYCTLRLLVCLFDAKPEFVPSIVNYNRLIDQFCSFSLPNVA 180

Query: 181 HRVLFDMKSRGHCPNVVSYTALIDGYSRVGNVSAAEKLFDEMPENDVEPNSLTYSVLIHG 240
           HRVLFDMKSRGHCPNVVSYTALIDGY RV NVSAAEKLFDEMP N VEPNSLTYSVLI+G
Sbjct: 181 HRVLFDMKSRGHCPNVVSYTALIDGYCRVCNVSAAEKLFDEMPGNYVEPNSLTYSVLING 240

Query: 241 FLYKRDFETGKALMCKLWERMKGEIDSSVKSAAFAHLVDSLCLAGSFHEVFLIAEDMPQG 300
           FLYKRDFETGKAL+C LWERMKGE+DSSV +AAFAHLVDSLCL GSFHEVF IAEDMPQG
Sbjct: 241 FLYKRDFETGKALICNLWERMKGELDSSVNNAAFAHLVDSLCLVGSFHEVFTIAEDMPQG 300

Query: 301 QSVPEEFAYGQMIDSLCKAKRHHGASRIVYIMRKKGINPGLLSYNSIIHGLSKEGSCMRA 360
           QSVPEEFAYGQMIDSLCKAKR+HGASRIVYIMRKKG+NPGLLSYNSIIHGLSKEG CMRA
Sbjct: 301 QSVPEEFAYGQMIDSLCKAKRYHGASRIVYIMRKKGLNPGLLSYNSIIHGLSKEGGCMRA 360

Query: 361 YQLLVEGVEFGYSPSEHTYKVLLECLCKELDIQKAKEVLQIMIEKEGVDRTRIYNIYLRA 420
           YQLLVEGVEFGYSPSEHTYKVLLE LCKELD QKAKEVLQIMI K+GVDRTRIYNIYLRA
Sbjct: 361 YQLLVEGVEFGYSPSEHTYKVLLEGLCKELDTQKAKEVLQIMIHKQGVDRTRIYNIYLRA 420

Query: 421 VCLTNNSTELLNTLVVMLQTNCHPDVITLNTVIKGFCKVGSIEEALKVLNDMMIGKFCTP 480
           VCLTNNSTELLNTLV MLQTNC PDVITLNTVIKGFCKVGSIEEALKVLNDM+ GKFCTP
Sbjct: 421 VCLTNNSTELLNTLVEMLQTNCQPDVITLNTVIKGFCKVGSIEEALKVLNDMIGGKFCTP 480

Query: 481 DCVTFTTIICGLLNVGRIRESLDILYKVMPEKGMVPGVITYNATIRGLFKLQQANQAMDT 540
           D VTFTTII GLLNVGRIRESLDILYKVMPEKG+VPGVITYNATIRGLFKLQQANQAM+T
Sbjct: 481 DHVTFTTIIFGLLNVGRIRESLDILYKVMPEKGIVPGVITYNATIRGLFKLQQANQAMNT 540

Query: 541 FDRMVRNGIQADSTTYAVIIDGLCGSNKIEEVKRFWKDIVWPSKIHDSFVYSAILKGLCH 600
           FDRMVRNGIQADSTTYAV+IDGLC  N+IEEVKRFWKDIVWPSKIHDSFVYSAILKGLCH
Sbjct: 541 FDRMVRNGIQADSTTYAVVIDGLCDCNQIEEVKRFWKDIVWPSKIHDSFVYSAILKGLCH 600

Query: 601 SSKFNEACHFLYELADSGVYPSIFCYNIVINTACKLGLKGEAYQLVTEMRKNGLAPDAVT 660
           SSKFNEACHFLYEL+DSGV P+IFCYNIVINTACKLGLKGEAY+LV EMRKNGLAPDAVT
Sbjct: 601 SSKFNEACHFLYELSDSGVSPTIFCYNIVINTACKLGLKGEAYRLVKEMRKNGLAPDAVT 660

Query: 661 WRILHKLHQNEMTQSLPK 679
           WRILHKLHQNE    LP+
Sbjct: 661 WRILHKLHQNETDNPLPR 678

BLAST of Lsi06G012880 vs. TrEMBL
Match: A0A067JM78_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_27078 PE=4 SV=1)

HSP 1 Score: 897.1 bits (2317), Expect = 1.3e-257
Identity = 429/648 (66.20%), Postives = 518/648 (79.94%), Query Frame = 1

Query: 24  FTRTANFLRHQPENGSDVREWSPEE-SVADVSYWTKKVHGLCTKDRNVDEALRLLDALRL 83
           F R + F  +Q  N   + +   E  S+A+ SYWT+K+H LCT+ R VDEAL LLD LRL
Sbjct: 16  FIRLSFFSTYQLPNTEPLHQDHEEAISIANRSYWTRKIHDLCTQHRKVDEALALLDHLRL 75

Query: 84  HGYQLHPLNLGSIIHGLSDARRFHEAHCRFMLSVASRCVPDERTCNVLLARLLDYRSPYC 143
            GY+   LNL SIIH L +A RF+EAH RF+LS++S C+PDERTCNV++ARLLD + P+ 
Sbjct: 76  RGYRPDSLNLSSIIHALCEANRFNEAHRRFVLSISSNCIPDERTCNVIIARLLDSQFPHS 135

Query: 144 TLRLLVCLFDAKPEFVPSIVNYNRLIDQFCSFSLPNVAHRVLFDMKSRGHCPNVVSYTAL 203
           T   +  LFD KP+FVPS++NYNRLI Q+C  S PN+ HR+L+DM SRGHCPN+V+YT+L
Sbjct: 136 TFYAICRLFDVKPQFVPSLINYNRLIYQYCEVSHPNIGHRLLYDMISRGHCPNIVTYTSL 195

Query: 204 IDGYSRVGNVSAAEKLFDEMPENDVEPNSLTYSVLIHGFLYKRDFETGKALMCKLWERMK 263
           I+GY RVG VS+A K+FDEM E  + PNSLTYSVLI G L KRD E GK LMC LW+RMK
Sbjct: 196 INGYCRVGEVSSAHKVFDEMHEYGIVPNSLTYSVLIRGVLAKRDVERGKELMCNLWQRMK 255

Query: 264 GEIDSSVKSAAFAHLVDSLCLAGSFHEVFLIAEDMPQGQSVPEEFAYGQMIDSLCKAKRH 323
            E D SV SAAF +L+DSLC  G F++VF IAEDMPQG+ V EEFAYG MIDSLC+  ++
Sbjct: 256 DEEDQSVNSAAFGNLIDSLCREGFFNDVFSIAEDMPQGKCVNEEFAYGHMIDSLCRVGKN 315

Query: 324 HGASRIVYIMRKKGINPGLLSYNSIIHGLSKEGSCMRAYQLLVEGVEFGYSPSEHTYKVL 383
           HGASRIVYIMRK+G  P L+SY+SIIHGL KEG CMRAYQL  EG+EFGY PSE+T+KVL
Sbjct: 316 HGASRIVYIMRKRGFIPSLVSYDSIIHGLCKEGGCMRAYQLFEEGIEFGYLPSEYTFKVL 375

Query: 384 LECLCKELDIQKAKEVLQIMIEKEGVDRTRIYNIYLRAVCLTNNSTELLNTLVVMLQTNC 443
           +E LC+E+DI KA+ VL++M+ K+GVDRTRIYNIY+RA+CL NN+TELLN LV MLQT+C
Sbjct: 376 VEALCQEMDIYKARIVLELMLNKKGVDRTRIYNIYMRALCLMNNATELLNVLVYMLQTDC 435

Query: 444 HPDVITLNTVIKGFCKVGSIEEALKVLNDMMIGKFCTPDCVTFTTIICGLLNVGRIRESL 503
            PDVITLNTVI GFCK+G IEEALKVLNDMM+GKFC PD VTFTTII GLLNVGR  E+L
Sbjct: 436 QPDVITLNTVINGFCKMGRIEEALKVLNDMMMGKFCAPDAVTFTTIIGGLLNVGRSEEAL 495

Query: 504 DILYKVMPEKGMVPGVITYNATIRGLFKLQQANQAMDTFDRMVRNGIQADSTTYAVIIDG 563
           ++L KVM E  + PGV+TYNA +RGLFKLQ AN+AM  F +M+ NG+ ADS TY +IIDG
Sbjct: 496 NLLNKVMLENDISPGVVTYNAVLRGLFKLQLANEAMMVFSKMLGNGVAADSKTYTIIIDG 555

Query: 564 LCGSNKIEEVKRFWKDIVWPSKIHDSFVYSAILKGLCHSSKFNEACHFLYELADSGVYPS 623
           LC S +IE+ K+FW +++WPSK+HD FVY++ILKGLC S   NEACHFLYEL DSGVYP+
Sbjct: 556 LCDSGQIEDAKKFWDEVIWPSKVHDDFVYASILKGLCRSGNLNEACHFLYELIDSGVYPN 615

Query: 624 IFCYNIVINTACKLGLKGEAYQLVTEMRKNGLAPDAVTWRILHKLHQN 671
           I  YNIVI++AC LG+K EAYQ+V EMRKNGL PDAVTWRIL KLH N
Sbjct: 616 IISYNIVIDSACNLGMKKEAYQIVNEMRKNGLTPDAVTWRILDKLHGN 663

BLAST of Lsi06G012880 vs. TrEMBL
Match: F6HXK7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_09s0002g00230 PE=4 SV=1)

HSP 1 Score: 893.6 bits (2308), Expect = 1.5e-256
Identity = 429/643 (66.72%), Postives = 510/643 (79.32%), Query Frame = 1

Query: 28  ANFLRHQPENGSDVREWSPEESVADVSYWTKKVHGLCTKDRNVDEALRLLDALRLHGYQL 87
           A F   Q        E   EES+ + ++W++K+H LCT+DRNVDEALRLLD LRL GY+ 
Sbjct: 29  AFFFSAQSTPNQQHEEEKEEESIINKAFWSRKIHNLCTRDRNVDEALRLLDLLRLRGYRP 88

Query: 88  HPLNLGSIIHGLSDARRFHEAHCRFMLSVASRCVPDERTCNVLLARLLDYRSPYCTLRLL 147
             LNL SIIH L DA RF EAH R +LS AS CVPD+RTCNVL+ARLLD R+P+ TL + 
Sbjct: 89  DSLNLSSIIHALCDANRFSEAHHRLLLSFASHCVPDQRTCNVLIARLLDSRTPHATLHVF 148

Query: 148 VCLFDAKPEFVPSIVNYNRLIDQFCSFSLPNVAHRVLFDMKSRGHCPNVVSYTALIDGYS 207
             L  A+PEFVPS++NYNRLI Q CSFS PN AH + FDM+SRGHCPN VSYT LIDGY 
Sbjct: 149 RGLIAARPEFVPSLINYNRLIHQLCSFSQPNEAHGLFFDMRSRGHCPNAVSYTTLIDGYC 208

Query: 208 RVGNVSAAEKLFDEMPENDVEPNSLTYSVLIHGFLYKRDFETGKALMCKLWERMKGEIDS 267
           ++G  ++A KLFDEM E+ V PNSLTYSVL+ G L KRD E G+ LMCKLW++M  E D 
Sbjct: 209 KIGEETSAWKLFDEMLESGVVPNSLTYSVLLKGVLCKRDVERGRELMCKLWQKMMDENDP 268

Query: 268 SVKSAAFAHLVDSLCLAGSFHEVFLIAEDMPQGQSVPEEFAYGQMIDSLCKAKRHHGASR 327
           SV +AAFA+L+DSLC  G F EVF IAEDMPQG+SV EEF YGQMIDSLC+  R+HGASR
Sbjct: 269 SVNNAAFANLIDSLCKEGFFLEVFRIAEDMPQGKSVSEEFVYGQMIDSLCRCGRNHGASR 328

Query: 328 IVYIMRKKGINPGLLSYNSIIHGLSKEGSCMRAYQLLVEGVEFGYSPSEHTYKVLLECLC 387
           IVYIMRK+G  P L+SYN I+HGLSKEG CMRAYQLL EGVEFGY  SEHTYKVLLE LC
Sbjct: 329 IVYIMRKRGFFPSLVSYNYIVHGLSKEGGCMRAYQLLKEGVEFGYMMSEHTYKVLLEALC 388

Query: 388 KELDIQKAKEVLQIMIEKEGVDRTRIYNIYLRAVCLTNNSTELLNTLVVMLQTNCHPDVI 447
           ++ D+ KA+EV+Q+M+ KEGVD+TRIYNIYLRA+CL NN TELLN LV MLQT C PDVI
Sbjct: 389 RDADLCKAREVMQLMLNKEGVDQTRIYNIYLRALCLMNNPTELLNVLVFMLQTQCQPDVI 448

Query: 448 TLNTVIKGFCKVGSIEEALKVLNDMMIGKFCTPDCVTFTTIICGLLNVGRIRESLDILYK 507
           TLNTVI GFCK+G +EEALKVL+DM++GKFC PD VT+TTIICGLLN+GR  E+LD+L +
Sbjct: 449 TLNTVINGFCKMGRVEEALKVLDDMVMGKFCAPDSVTYTTIICGLLNLGRTEEALDVLRR 508

Query: 508 VMPEKGMVPGVITYNATIRGLFKLQQANQAMDTFDRMVRNGIQADSTTYAVIIDGLCGSN 567
           VMPEKG  PGV+T+NA + GLFKLQQAN A + F+ MV +G+ A++ TY +IIDGL  S+
Sbjct: 509 VMPEKGFKPGVVTFNAVLHGLFKLQQANVATEVFNSMVSDGVAANTITYTIIIDGLFESD 568

Query: 568 KIEEVKRFWKDIVWPSKIHDSFVYSAILKGLCHSSKFNEACHFLYELADSGVYPSIFCYN 627
           +I+E KRFW D++WPSK+HD+FVY+AILKGLC S K NEAC FLYEL D GV  ++  YN
Sbjct: 569 QIDEAKRFWDDVIWPSKVHDNFVYAAILKGLCRSGKLNEACDFLYELVDCGVTLNVVNYN 628

Query: 628 IVINTACKLGLKGEAYQLVTEMRKNGLAPDAVTWRILHKLHQN 671
           I+I+ ACKLG K EAY +V EM+KNGL PDAVTWRILHKLH N
Sbjct: 629 ILIDHACKLGSKREAYTIVQEMKKNGLTPDAVTWRILHKLHGN 671

BLAST of Lsi06G012880 vs. TrEMBL
Match: W9RFH5_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_017380 PE=4 SV=1)

HSP 1 Score: 885.2 bits (2286), Expect = 5.3e-254
Identity = 436/694 (62.82%), Postives = 534/694 (76.95%), Query Frame = 1

Query: 15  SITSSISIFFTRTAN--------------FLRHQPENGSDVREWSPEESVADVSYWTKKV 74
           +I+ S++ FFT T                   H P+N     E   + SV D SYWTK +
Sbjct: 17  TISVSLAFFFTTTITPHPHPQQQHQQPKRQSNHGPDNSFSALE---QVSVDDKSYWTKTI 76

Query: 75  HGLCTKDRNVDEALRLLDALRLHGYQLHPLNLGSIIHGLSDARRFHEAHCRFMLSVASRC 134
           H LCT+ RNVDEAL LLD L L GY+   LNL SI+H L D+ RF EAH R +LSV S C
Sbjct: 77  HNLCTRHRNVDEALCLLDRLSLRGYRPDSLNLSSIVHALCDSNRFDEAHHRLILSVDSNC 136

Query: 135 VPDERTCNVLLARLLDYRSPYCTLRLLVCLFDAKPEFVPSIVNYNRLIDQFCSFSLPNVA 194
           VPDERTCNVL+ARLL  + P  TLR++  L + KPEFVPS+VNYNRLIDQ CSFS    A
Sbjct: 137 VPDERTCNVLIARLLGSKCPDATLRVIRKLIEFKPEFVPSLVNYNRLIDQLCSFSRVAEA 196

Query: 195 HRVLFDMKSRGHCPNVVSYTALIDGYSRVGNVSAAEKLFDEMPENDVEPNSLTYSVLIHG 254
           HR+ FD++ RGHCPN V++T LI+GY +VG +  A K+F+EM E  V PNSLT+SVLI  
Sbjct: 197 HRLFFDLQDRGHCPNAVTFTTLINGYCKVGELDCAHKMFEEMSERGVPPNSLTFSVLIRC 256

Query: 255 FLYKRDFETGKALMCKLWERMKGEIDSSVKSAAFAHLVDSLCLAGSFHEVFLIAEDMPQG 314
            L  RD E G+ LMC+LWERMK E DSSVK+AAF++LV+SLC  G F+EVF IAEDMPQG
Sbjct: 257 VLRMRDVERGRGLMCQLWERMKCEDDSSVKNAAFSNLVESLCREGFFNEVFSIAEDMPQG 316

Query: 315 QSVPEEFAYGQMIDSLCKAKRHHGASRIVYIMRKKGINPGLLSYNSIIHGLSKEGSCMRA 374
            S+ EEFAY QMIDSLCKA RHHGASRIVYIMRK+G+ P L+SYNSI+HGL  EG CMRA
Sbjct: 317 NSLNEEFAYAQMIDSLCKAGRHHGASRIVYIMRKRGLIPCLVSYNSIVHGLCNEGGCMRA 376

Query: 375 YQLLVEGVEFGYSPSEHTYKVLLECLCKELDIQKAKEVLQIMIEKEGVDRTRIYNIYLRA 434
           YQLL EG+EFGYSPS++TYKVL+ECL  + D+ KAKEVL++M++K+GVD+TRIYNIYLRA
Sbjct: 377 YQLLEEGIEFGYSPSDYTYKVLVECLSLKSDLLKAKEVLEVMLKKKGVDKTRIYNIYLRA 436

Query: 435 VCLTNNSTELLNTLVVMLQTNCHPDVITLNTVIKGFCKVGSIEEALKVLNDMMIGKFCTP 494
           +CL NN+TELLN +V MLQ+ C PDVITLNTVIKGFCK+G +EEALKVLNDMM+GKF  P
Sbjct: 437 LCLMNNATELLNVIVFMLQSQCQPDVITLNTVIKGFCKMGRVEEALKVLNDMMVGKFSAP 496

Query: 495 DCVTFTTIICGLLNVGRIRESLDILYKVMPEKGMVPGVITYNATIRGLFKLQQANQAMDT 554
           D +T+TTII GLLNVGRI++++D+L+  M + G+ PGV+TYNA +RGLFKL++AN+AM+ 
Sbjct: 497 DVMTYTTIIFGLLNVGRIQDAMDLLHCGMLDNGVNPGVVTYNAVLRGLFKLRRANEAMEI 556

Query: 555 FDRMVRNGIQADSTTYAVIIDGLCGSNKIEEVKRFWKDIVWPSKIHDSFVYSAILKGLCH 614
           ++ MV  GI ADSTTY +IIDGLC SN+IEE KRFW DI+WPS++HD+FVY+AILKGLC 
Sbjct: 557 YNTMVGRGIVADSTTYTIIIDGLCKSNQIEEAKRFWDDIIWPSRVHDNFVYAAILKGLCR 616

Query: 615 SSKFNEACHFLYELADSGVYPSIFCYNIVINTACKLGLKGEAYQLVTEMRKNGLAPDAVT 674
              F EACHFLYEL DSGV P+IF YNI+I++ACKLGLK EAYQ+V EMR+NGL PDAVT
Sbjct: 617 LGNFGEACHFLYELVDSGVSPNIFSYNILIDSACKLGLKDEAYQIVREMRRNGLNPDAVT 676

Query: 675 WRILHKLHQNEMTQSLPKDLTNQPRDRLDQTDLE 695
           WRIL KL +N    +   + T QP   L + +++
Sbjct: 677 WRILDKLPRNSRKLTFVDNSTLQPGSGLPKMEIQ 707

BLAST of Lsi06G012880 vs. TrEMBL
Match: M5W8V4_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppb014337mg PE=4 SV=1)

HSP 1 Score: 881.7 bits (2277), Expect = 5.8e-253
Identity = 431/651 (66.21%), Postives = 508/651 (78.03%), Query Frame = 1

Query: 33  HQPENGSDVREWSPEESVADVSYWTKKVHGLCTKDRNVDEALRLLDALRLHGYQLHPLNL 92
           HQ +   D      + S+ + SYWTKK+H LCT  RNVD+AL LLD LRL GY+   LNL
Sbjct: 32  HQQDGDQD------QTSIDNRSYWTKKIHSLCTAHRNVDQALHLLDRLRLLGYRPDSLNL 91

Query: 93  GSIIHGLSDARRFHEAHCRFMLSVASRCVPDERTCNVLLARLLDYRSPYCTLRLLVCLFD 152
            SI+H L D+ RF EAH RF  S+AS CVPDERTCNV++ARLLD R+P+ TLRLL  L  
Sbjct: 92  SSILHALCDSNRFAEAHHRFAHSIASDCVPDERTCNVIVARLLDSRTPHTTLRLLHRLSH 151

Query: 153 AKPEFVPSIVNYNRLIDQFCSFSLPNVAHRVLFDMKSRGHCPNVVSYTALIDGYSRVGNV 212
            KPEFVPS++NYNRL+DQ C    P  AHRV FDM S+GHCPN VSYT LI+GY  +G +
Sbjct: 152 VKPEFVPSLINYNRLMDQLCLLLRPWEAHRVFFDMLSKGHCPNAVSYTTLINGYCLIGEL 211

Query: 213 SAAEKLFDEMPENDVEPNSLTYSVLIHGFLYKRDFETGKALMCKLWERMKGEIDSSVKSA 272
             A+K+FDEM E  V PNSLTYSV+I G L KRD    K  M KLWE MKGE D++VKSA
Sbjct: 212 GDAQKVFDEMGEKGVAPNSLTYSVMIRGVLRKRDVGRAKEWMGKLWEIMKGEDDTTVKSA 271

Query: 273 AFAHLVDSLCLAGSFHEVFLIAEDMPQGQSVPEEFAYGQMIDSLCKAKRHHGASRIVYIM 332
           AFA L+DS+C  G F EVF IAEDMPQG+SV E+FAYGQMIDSLCKA RHHGASRIVYIM
Sbjct: 272 AFASLIDSMCREGYFQEVFGIAEDMPQGKSVNEDFAYGQMIDSLCKAGRHHGASRIVYIM 331

Query: 333 RKKGINPGLLSYNSIIHGLSKEGSCMRAYQLLVEGVEFGYSPSEHTYKVLLECLCKELDI 392
           R  G  P L SYNSI+HGLSKEG CMRAYQLL EG++FGY PSE+TYKVL+E LC+E D 
Sbjct: 332 RNAGFAPKLTSYNSILHGLSKEGGCMRAYQLLEEGIKFGYFPSEYTYKVLVEGLCQESDP 391

Query: 393 QKAKEVLQIMIEKEGVDRTRIYNIYLRAVCLTNNSTELLNTLVVMLQTNCHPDVITLNTV 452
            KA+EVL  M+ KEGVDRTR+YN+YLRA+CL NN+TELLN LV MLQT C PDVITLN V
Sbjct: 392 HKAREVLHYMLSKEGVDRTRMYNMYLRALCLMNNTTELLNGLVSMLQTQCQPDVITLNIV 451

Query: 453 IKGFCKVGSIEEALKVLNDMMIGKFCTPDCVTFTTIICGLLNVGRIRESLDILYKVMPEK 512
           + G CK+G IE+A KVLNDMM GKFC PD VTFTT+I GLLNVGR  E+L +L+ VMPEK
Sbjct: 452 VNGLCKMGRIEDASKVLNDMMTGKFCAPDVVTFTTMISGLLNVGRTEEALGLLHHVMPEK 511

Query: 513 GMVPGVITYNATIRGLFKLQQANQAMDTFDRMVRNGIQADSTTYAVIIDGLCGSNKIEEV 572
           G  P V+TYNA +RGLFK +QA +AM+ F+ MV +G+ ADSTTY +IIDGLC S++IEE 
Sbjct: 512 GFSPNVVTYNAVLRGLFKHKQAREAMELFNLMVSDGVAADSTTYTIIIDGLCDSDQIEEA 571

Query: 573 KRFWKDIVWPSKIHDSFVYSAILKGLCHSSKFNEACHFLYELADSGVYPSIFCYNIVINT 632
           KRFW +++WPSKIHD+FVY+AI+KG+CHS KF+EACHFLYEL D+GV P+I+ YNIVI+ 
Sbjct: 572 KRFWDEVIWPSKIHDNFVYAAIIKGICHSGKFDEACHFLYELVDAGVSPNIYSYNIVIDA 631

Query: 633 ACKLGLKGEAYQLVTEMRKNGLAPDAVTWRILHKLHQNEMTQSLPKDLTNQ 684
           ACKLGLK EAY++V EMR+NGLAPD+VTWRIL KLH N   Q   +D T Q
Sbjct: 632 ACKLGLKKEAYEVVKEMRRNGLAPDSVTWRILDKLHGNARKQFCAEDSTLQ 676

BLAST of Lsi06G012880 vs. TAIR10
Match: AT3G18020.1 (AT3G18020.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 768.5 bits (1983), Expect = 3.6e-222
Identity = 373/669 (55.75%), Postives = 486/669 (72.65%), Query Frame = 1

Query: 23  FFTRTANF-----LRHQPENGSD--VREWSPEESVADVSYWTKKVHGLCTKDRNVDEALR 82
           FF+++ +F     L+     G D  +       SV D +YW +++H +C   RN DEALR
Sbjct: 17  FFSKSLSFSSASVLKSDDVEGEDDAIEAEDRRRSVTDRAYWRRRIHSICAVRRNPDEALR 76

Query: 83  LLDALRLHGYQLHPLNLGSIIHGLSDARRFHEAHCRFMLSVASRCVPDERTCNVLLARLL 142
           +LD L L GY+   LNL S+IH L DA RF EAH RF+L +AS  +PDERTCNV++ARLL
Sbjct: 77  ILDGLCLRGYRPDSLNLSSVIHSLCDAGRFDEAHRRFLLFLASGFIPDERTCNVIIARLL 136

Query: 143 DYRSPYCTLRLLVCLFDAKPEFVPSIVNYNRLIDQFCSFSLPNVAHRVLFDMKSRGHCPN 202
             RSP  TL ++  L   K EFVPS+ NYNRL++Q C+      AH+++FDM++RGH P+
Sbjct: 137 YSRSPVSTLGVIHRLIGFKKEFVPSLTNYNRLMNQLCTIYRVIDAHKLVFDMRNRGHLPD 196

Query: 203 VVSYTALIDGYSRVGNVSAAEKLFDEMPENDVEPNSLTYSVLIHGFLYKRDFETGKALMC 262
           VV++T LI GY  +  +  A K+FDEM    + PNSLT SVLI GFL  RD ETG+ LM 
Sbjct: 197 VVTFTTLIGGYCEIRELEVAHKVFDEMRVCGIRPNSLTLSVLIGGFLKMRDVETGRKLMK 256

Query: 263 KLWERMKGEIDSSVKSAAFAHLVDSLCLAGSFHEVFLIAEDMPQGQSVPEEFAYGQMIDS 322
           +LWE MK E D+S+K+AAFA+LVDS+C  G F+++F IAE+M   +SV  EFAYG MIDS
Sbjct: 257 ELWEYMKNETDTSMKAAAFANLVDSMCREGYFNDIFEIAENMSLCESVNVEFAYGHMIDS 316

Query: 323 LCKAKRHHGASRIVYIMRKKGINPGLLSYNSIIHGLSKEGSCMRAYQLLVEGVEFGYSPS 382
           LC+ +R+HGA+RIVYIM+ KG+ P   SYN+IIHGL K+G CMRAYQLL EG EF + PS
Sbjct: 317 LCRYRRNHGAARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPS 376

Query: 383 EHTYKVLLECLCKELDIQKAKEVLQIMIEKEGVDRTRIYNIYLRAVCLTNNSTELLNTLV 442
           E+TYK+L+E LCKELD  KA+ VL++M+ KEG DRTRIYNIYLR +C+ +N TE+LN LV
Sbjct: 377 EYTYKLLMESLCKELDTGKARNVLELMLRKEGADRTRIYNIYLRGLCVMDNPTEILNVLV 436

Query: 443 VMLQTNCHPDVITLNTVIKGFCKVGSIEEALKVLNDMMIGKFCTPDCVTFTTIICGLLNV 502
            MLQ +C PD  TLNTVI G CK+G +++A+KVL+DMM GKFC PD VT  T++CGLL  
Sbjct: 437 SMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQ 496

Query: 503 GRIRESLDILYKVMPEKGMVPGVITYNATIRGLFKLQQANQAMDTFDRMVRNGIQADSTT 562
           GR  E+LD+L +VMPE  + PGV+ YNA IRGLFKL + ++AM  F ++ +  + ADSTT
Sbjct: 497 GRAEEALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTT 556

Query: 563 YAVIIDGLCGSNKIEEVKRFWKDIVWPSKIHDSFVYSAILKGLCHSSKFNEACHFLYELA 622
           YA+IIDGLC +NK++  K+FW D++WPS  HD+FVY+A LKGLC S   ++ACHFLY+LA
Sbjct: 557 YAIIIDGLCVTNKVDMAKKFWDDVIWPSGRHDAFVYAAFLKGLCQSGYLSDACHFLYDLA 616

Query: 623 DSGVYPSIFCYNIVINTACKLGLKGEAYQLVTEMRKNGLAPDAVTWRILHKLHQNEMTQS 682
           DSG  P++ CYN VI    + GLK EAYQ++ EMRKNG APDAVTWRIL KLH + M  +
Sbjct: 617 DSGAIPNVVCYNTVIAECSRSGLKREAYQILEEMRKNGQAPDAVTWRILDKLH-DSMDLT 676

Query: 683 LPKDLTNQP 685
           + ++L + P
Sbjct: 677 VERELISNP 684

BLAST of Lsi06G012880 vs. TAIR10
Match: AT1G62670.1 (AT1G62670.1 rna processing factor 2)

HSP 1 Score: 232.3 bits (591), Expect = 9.4e-61
Identity = 146/513 (28.46%), Postives = 249/513 (48.54%), Query Frame = 1

Query: 164 YNRLIDQFCSFSLPNVAHRVLFDMKSRGHCPNVVSYTALIDGYSRVGNVSAAEKLFDEMP 223
           Y+ LI+ FC  S   +A  VL  M   G+ PN+V+ ++L++GY     +S A  L D+M 
Sbjct: 119 YSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMF 178

Query: 224 ENDVEPNSLTYSVLIHGFLYKRDFETGKALMCKLWERMKGEIDSSVKSAAFAHLVDSLCL 283
               +PN++T++ LIHG           AL+    +RM  +         +  +V+ LC 
Sbjct: 179 VTGYQPNTVTFNTLIHGLFLHNKASEAMALI----DRMVAK-GCQPDLVTYGVVVNGLCK 238

Query: 284 AGSFHEVFLIAEDMPQGQSVPEEFAYGQMIDSLCKAKRHHGASRIVYIMRKKGINPGLLS 343
            G     F +   M QG+  P    Y  +ID LCK K    A  +   M  KGI P +++
Sbjct: 239 RGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVT 298

Query: 344 YNSIIHGLSKEGSCMRAYQLLVEGVEFGYSPSEHTYKVLLECLCKELDIQKAKEVLQIMI 403
           Y+S+I  L   G    A +LL + +E   +P   T+  L++   KE  + +A+++   M+
Sbjct: 299 YSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMV 358

Query: 404 EKEGVDRTRIYNIYLRAVCLTNNSTELLNTLVVMLQTNCHPDVITLNTVIKGFCKVGSIE 463
           ++        Y+  +   C+ +   E       M+  +C PDV+T NT+IKGFCK   +E
Sbjct: 359 KRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVE 418

Query: 464 EALKVLNDMMIGKFCTPDCVTFTTIICGLLNVGRIRESLDILYKVMPEKGMVPGVITYNA 523
           E ++V  +M   +    + VT+  +I GL   G    + +I +K M   G+ P ++TYN 
Sbjct: 419 EGMEVFREMS-QRGLVGNTVTYNILIQGLFQAGDCDMAQEI-FKEMVSDGVPPNIMTYNT 478

Query: 524 TIRGLFKLQQANQAMDTFDRMVRNGIQADSTTYAVIIDGLCGSNKIEEVKRFWKDIVWPS 583
            + GL K  +  +AM  F+ + R+ ++    TY ++I+G+C + K+E+    + ++    
Sbjct: 479 LLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKG 538

Query: 584 KIHDSFVYSAILKGLCHSSKFNEACHFLYELADSGVYPSIFCYNIVINTACKLGLKGEAY 643
              D   Y+ ++ G C      EA     E+ + G  P+  CYN +I    + G +  + 
Sbjct: 539 VKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASA 598

Query: 644 QLVTEMRKNGLAPDAVT-WRILHKLHQNEMTQS 676
           +L+ EMR  G A DA T   + + LH   + +S
Sbjct: 599 ELIKEMRSCGFAGDASTIGLVTNMLHDGRLDKS 624

BLAST of Lsi06G012880 vs. TAIR10
Match: AT5G65560.1 (AT5G65560.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 225.3 bits (573), Expect = 1.1e-58
Identity = 145/527 (27.51%), Postives = 263/527 (49.91%), Query Frame = 1

Query: 164 YNRLIDQFCSFSLPNVAHRVLFDMKSRGHCPNVVSYTALIDGYSRVGNVSAAEKLFDEMP 223
           YN L++    F L +   +V  +M     CPN+ +Y  +++GY ++GNV  A +   ++ 
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245

Query: 224 ENDVEPNSLTYSVLIHGFLYKRDFETGKALMCKLWERMKGEIDSSVKSAAFAHLVDSLCL 283
           E  ++P+  TY+ LI G+  ++D ++   +  ++   +KG   + V   A+ HL+  LC+
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEM--PLKGCRRNEV---AYTHLIHGLCV 305

Query: 284 AGSFHEVFLIAEDMPQGQSVPEEFAYGQMIDSLCKAKRHHGASRIVYIMRKKGINPGLLS 343
           A    E   +   M   +  P    Y  +I SLC ++R   A  +V  M + GI P + +
Sbjct: 306 ARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHT 365

Query: 344 YNSIIHGLSKEGSCMRAYQLLVEGVEFGYSPSEHTYKVLLECLCKELDIQKAKEVLQIMI 403
           Y  +I  L  +    +A +LL + +E G  P+  TY  L+   CK   I+ A +V+++M 
Sbjct: 366 YTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELME 425

Query: 404 EKEGVDRTRIYNIYLRAVCLTNNSTELLNTLVVMLQTNCHPDVITLNTVIKGFCKVGSIE 463
            ++    TR YN  ++  C  +N  + +  L  ML+    PDV+T N++I G C+ G+ +
Sbjct: 426 SRKLSPNTRTYNELIKGYC-KSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFD 485

Query: 464 EALKVLNDMMIGKFCTPDCVTFTTIICGLLNVGRIRESLDILYKVMPEKGMVPGVITYNA 523
            A ++L+ +M  +   PD  T+T++I  L    R+ E+ D L+  + +KG+ P V+ Y A
Sbjct: 486 SAYRLLS-LMNDRGLVPDQWTYTSMIDSLCKSKRVEEACD-LFDSLEQKGVNPNVVMYTA 545

Query: 524 TIRGLFKLQQANQAMDTFDRMVRNGIQADSTTYAVIIDGLCGSNKIEEV----KRFWKDI 583
            I G  K  + ++A    ++M+      +S T+  +I GLC   K++E     ++  K  
Sbjct: 546 LIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIG 605

Query: 584 VWPSKIHDSFVYSAILKGLCHSSKFNEACHFLYELADSGVYPSIFCYNIVINTACKLGLK 643
           + P+   D+ +   +LK       F+ A     ++  SG  P    Y   I T C+ G  
Sbjct: 606 LQPTVSTDTILIHRLLK----DGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRL 665

Query: 644 GEAYQLVTEMRKNGLAPDAVTWRILHKLHQNEMTQSLPKDLTNQPRD 687
            +A  ++ +MR+NG++PD  T+  L K + +    +   D+  + RD
Sbjct: 666 LDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRD 700

BLAST of Lsi06G012880 vs. TAIR10
Match: AT1G62930.1 (AT1G62930.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 223.8 bits (569), Expect = 3.3e-58
Identity = 138/516 (26.74%), Postives = 255/516 (49.42%), Query Frame = 1

Query: 161 IVNYNRLIDQFCSFSLPNVAHRVLFDMKSRGHCPNVVSYTALIDGYSRVGNVSAAEKLFD 220
           + +YN LI+ FC  S   +A  VL  M   G+ P++V+ ++L++GY     +S A  L D
Sbjct: 115 LYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVD 174

Query: 221 EMPENDVEPNSLTYSVLIHGFLYKRDFETGKALMCKLWERMKGEIDSSVKSAAFAHLVDS 280
           +M   + +PN++T++ LIHG           AL+ ++  R             +  +V+ 
Sbjct: 175 QMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAR-----GCQPDLFTYGTVVNG 234

Query: 281 LCLAGSFHEVFLIAEDMPQGQSVPEEFAYGQMIDSLCKAKRHHGASRIVYIMRKKGINPG 340
           LC  G       + + M +G+   +   Y  +ID+LC  K  + A  +   M  KGI P 
Sbjct: 235 LCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPN 294

Query: 341 LLSYNSIIHGLSKEGSCMRAYQLLVEGVEFGYSPSEHTYKVLLECLCKELDIQKAKEVLQ 400
           +++YNS+I  L   G    A +LL + +E   +P+  T+  L++   KE  + +A+++  
Sbjct: 295 VVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYD 354

Query: 401 IMIEKEGVDRTRIYNIYLRAVCLTNNSTELLNTLVVMLQTNCHPDVITLNTVIKGFCKVG 460
            MI++        Y+  +   C+ +   E  +   +M+  +C P+V+T NT+IKGFCK  
Sbjct: 355 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAK 414

Query: 461 SIEEALKVLNDMMIGKFCTPDCVTFTTIICGLLNVGRIRESLDILYKVMPEKGMVPGVIT 520
            +EE +++  +M   +    + VT+ T+I GL   G   +    ++K M   G+ P +IT
Sbjct: 415 RVEEGMELFREMS-QRGLVGNTVTYNTLIQGLFQAGDC-DMAQKIFKKMVSDGVPPDIIT 474

Query: 521 YNATIRGLFKLQQANQAMDTFDRMVRNGIQADSTTYAVIIDGLCGSNKIEEVKRFWKDIV 580
           Y+  + GL K  +  +A+  F+ + ++ ++ D  TY ++I+G+C + K+E+    +  + 
Sbjct: 475 YSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLS 534

Query: 581 WPSKIHDSFVYSAILKGLCHSSKFNEACHFLYELADSGVYPSIFCYNIVINTACKLGLKG 640
                 +  +Y+ ++ G C      EA     E+ + G  P+   YN +I    + G K 
Sbjct: 535 LKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKA 594

Query: 641 EAYQLVTEMRKNGLAPDAVT-WRILHKLHQNEMTQS 676
            + +L+ EMR  G   DA T   +++ LH   + +S
Sbjct: 595 ASAELIKEMRSCGFVGDASTISMVINMLHDGRLEKS 623

BLAST of Lsi06G012880 vs. TAIR10
Match: AT1G62910.1 (AT1G62910.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 221.5 bits (563), Expect = 1.7e-57
Identity = 137/516 (26.55%), Postives = 255/516 (49.42%), Query Frame = 1

Query: 161 IVNYNRLIDQFCSFSLPNVAHRVLFDMKSRGHCPNVVSYTALIDGYSRVGNVSAAEKLFD 220
           +  Y+  I+ FC  S  ++A  VL  M   G+ P++V+ ++L++GY     +S A  L D
Sbjct: 118 LYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVD 177

Query: 221 EMPENDVEPNSLTYSVLIHGFLYKRDFETGKALMCKLWERMKGEIDSSVKSAAFAHLVDS 280
           +M E   +P++ T++ LIHG           AL+ ++ +R             +  +V+ 
Sbjct: 178 QMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQR-----GCQPDLVTYGTVVNG 237

Query: 281 LCLAGSFHEVFLIAEDMPQGQSVPEEFAYGQMIDSLCKAKRHHGASRIVYIMRKKGINPG 340
           LC  G       + + M +G+   +   Y  +ID LCK K    A  +   M  KGI P 
Sbjct: 238 LCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPD 297

Query: 341 LLSYNSIIHGLSKEGSCMRAYQLLVEGVEFGYSPSEHTYKVLLECLCKELDIQKAKEVLQ 400
           + +Y+S+I  L   G    A +LL + +E   +P+  T+  L++   KE  + +A+++  
Sbjct: 298 VFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYD 357

Query: 401 IMIEKEGVDRTRIYNIYLRAVCLTNNSTELLNTLVVMLQTNCHPDVITLNTVIKGFCKVG 460
            MI++        Y+  +   C+ +   E  +   +M+  +C P+V+T +T+IKGFCK  
Sbjct: 358 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAK 417

Query: 461 SIEEALKVLNDMMIGKFCTPDCVTFTTIICGLLNVGRIRESLDILYKVMPEKGMVPGVIT 520
            +EE +++  +M   +    + VT+TT+I G     R  ++  +++K M   G+ P ++T
Sbjct: 418 RVEEGMELFREMS-QRGLVGNTVTYTTLIHGFFQ-ARDCDNAQMVFKQMVSVGVHPNILT 477

Query: 521 YNATIRGLFKLQQANQAMDTFDRMVRNGIQADSTTYAVIIDGLCGSNKIEEVKRFWKDIV 580
           YN  + GL K  +  +AM  F+ + R+ ++ D  TY ++I+G+C + K+E+    + ++ 
Sbjct: 478 YNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLS 537

Query: 581 WPSKIHDSFVYSAILKGLCHSSKFNEACHFLYELADSGVYPSIFCYNIVINTACKLGLKG 640
                 +   Y+ ++ G C      EA   L ++ + G  P+   YN +I    + G + 
Sbjct: 538 LKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDRE 597

Query: 641 EAYQLVTEMRKNGLAPDAVT-WRILHKLHQNEMTQS 676
            + +L+ EMR  G A DA T   + + LH   + +S
Sbjct: 598 ASAELIKEMRSCGFAGDASTIGLVTNMLHDGRLDKS 626

BLAST of Lsi06G012880 vs. NCBI nr
Match: gi|778656480|ref|XP_011649150.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g18020 [Cucumis sativus])

HSP 1 Score: 1268.4 bits (3281), Expect = 0.0e+00
Identity = 621/678 (91.59%), Postives = 643/678 (94.84%), Query Frame = 1

Query: 1   MFRAAHRSLSIKIVSITSSISIFFTRTANFLRHQPENGSDVREWSPEESVADVSYWTKKV 60
           MFRAAHRSLSIKIVSIT SISI FTRTANF R  PENGSD REW+PEESVADVSYWTKK+
Sbjct: 1   MFRAAHRSLSIKIVSITPSISILFTRTANFQRLHPENGSDSREWAPEESVADVSYWTKKI 60

Query: 61  HGLCTKDRNVDEALRLLDALRLHGYQLHPLNLGSIIHGLSDARRFHEAHCRFMLSVASRC 120
           HGLCTKDRNVDEAL+LLDALRLHGYQ HPLNL S+IHGL DA RFHEAHCRFMLS+ASRC
Sbjct: 61  HGLCTKDRNVDEALQLLDALRLHGYQFHPLNLASVIHGLCDAHRFHEAHCRFMLSIASRC 120

Query: 121 VPDERTCNVLLARLLDYRSPYCTLRLLVCLFDAKPEFVPSIVNYNRLIDQFCSFSLPNVA 180
           VPDERTCNVL+ARLLDYRSPYCTLRLLVCLFDAKPEFVPSIVNYNRLIDQFCSFSLPNVA
Sbjct: 121 VPDERTCNVLIARLLDYRSPYCTLRLLVCLFDAKPEFVPSIVNYNRLIDQFCSFSLPNVA 180

Query: 181 HRVLFDMKSRGHCPNVVSYTALIDGYSRVGNVSAAEKLFDEMPENDVEPNSLTYSVLIHG 240
           HRVLFDMKSRGHCPNVVSYTALIDGY RV NVSAAEKLFDEMP N VEPNSLTYSVLI+G
Sbjct: 181 HRVLFDMKSRGHCPNVVSYTALIDGYCRVCNVSAAEKLFDEMPGNYVEPNSLTYSVLING 240

Query: 241 FLYKRDFETGKALMCKLWERMKGEIDSSVKSAAFAHLVDSLCLAGSFHEVFLIAEDMPQG 300
           FLYKRDFETGKAL+C LWERMKGE+DSSV +AAFAHLVDSLCL GSFHEVF IAEDMPQG
Sbjct: 241 FLYKRDFETGKALICNLWERMKGELDSSVNNAAFAHLVDSLCLVGSFHEVFTIAEDMPQG 300

Query: 301 QSVPEEFAYGQMIDSLCKAKRHHGASRIVYIMRKKGINPGLLSYNSIIHGLSKEGSCMRA 360
           QSVPEEFAYGQMIDSLCKAKR+HGASRIVYIMRKKG+NPGLLSYNSIIHGLSKEG CMRA
Sbjct: 301 QSVPEEFAYGQMIDSLCKAKRYHGASRIVYIMRKKGLNPGLLSYNSIIHGLSKEGGCMRA 360

Query: 361 YQLLVEGVEFGYSPSEHTYKVLLECLCKELDIQKAKEVLQIMIEKEGVDRTRIYNIYLRA 420
           YQLLVEGVEFGYSPSEHTYKVLLE LCKELD QKAKEVLQIMI K+GVDRTRIYNIYLRA
Sbjct: 361 YQLLVEGVEFGYSPSEHTYKVLLEGLCKELDTQKAKEVLQIMIHKQGVDRTRIYNIYLRA 420

Query: 421 VCLTNNSTELLNTLVVMLQTNCHPDVITLNTVIKGFCKVGSIEEALKVLNDMMIGKFCTP 480
           VCLTNNSTELLNTLV MLQTNC PDVITLNTVIKGFCKVGSIEEALKVLNDM+ GKFCTP
Sbjct: 421 VCLTNNSTELLNTLVEMLQTNCQPDVITLNTVIKGFCKVGSIEEALKVLNDMIGGKFCTP 480

Query: 481 DCVTFTTIICGLLNVGRIRESLDILYKVMPEKGMVPGVITYNATIRGLFKLQQANQAMDT 540
           D VTFTTII GLLNVGRIRESLDILYKVMPEKG+VPGVITYNATIRGLFKLQQANQAM+T
Sbjct: 481 DHVTFTTIIFGLLNVGRIRESLDILYKVMPEKGIVPGVITYNATIRGLFKLQQANQAMNT 540

Query: 541 FDRMVRNGIQADSTTYAVIIDGLCGSNKIEEVKRFWKDIVWPSKIHDSFVYSAILKGLCH 600
           FDRMVRNGIQADSTTYAV+IDGLC  N+IEEVKRFWKDIVWPSKIHDSFVYSAILKGLCH
Sbjct: 541 FDRMVRNGIQADSTTYAVVIDGLCDCNQIEEVKRFWKDIVWPSKIHDSFVYSAILKGLCH 600

Query: 601 SSKFNEACHFLYELADSGVYPSIFCYNIVINTACKLGLKGEAYQLVTEMRKNGLAPDAVT 660
           SSKFNEACHFLYEL+DSGV P+IFCYNIVINTACKLGLKGEAY+LV EMRKNGLAPDAVT
Sbjct: 601 SSKFNEACHFLYELSDSGVSPTIFCYNIVINTACKLGLKGEAYRLVKEMRKNGLAPDAVT 660

Query: 661 WRILHKLHQNEMTQSLPK 679
           WRILHKLHQNE    LP+
Sbjct: 661 WRILHKLHQNETDNPLPR 678

BLAST of Lsi06G012880 vs. NCBI nr
Match: gi|659106953|ref|XP_008453476.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g18020 [Cucumis melo])

HSP 1 Score: 1260.0 bits (3259), Expect = 0.0e+00
Identity = 618/677 (91.29%), Postives = 644/677 (95.13%), Query Frame = 1

Query: 1   MFRAAHRSLSIKIVSITSSISIFFTRTANFLRHQPENGSDVREWSPEESVADVSYWTKKV 60
           MFRAAHRSLSIKI+SIT SISI FTRTANF R Q ENGSD R+W+PEESVADVSYWTKK+
Sbjct: 1   MFRAAHRSLSIKILSITPSISILFTRTANFPRLQLENGSDGRQWAPEESVADVSYWTKKI 60

Query: 61  HGLCTKDRNVDEALRLLDALRLHGYQLHPLNLGSIIHGLSDARRFHEAHCRFMLSVASRC 120
           HGLCTKDRNVDEALRL+DALRLHGYQ HPLNL SIIHGL DA RFHEAHCRFMLS+ASRC
Sbjct: 61  HGLCTKDRNVDEALRLVDALRLHGYQFHPLNLASIIHGLCDAHRFHEAHCRFMLSIASRC 120

Query: 121 VPDERTCNVLLARLLDYRSPYCTLRLLVCLFDAKPEFVPSIVNYNRLIDQFCSFSLPNVA 180
           VPDERTCNVL+ARLL YRSPYCTLRLL CLFDAKPEFVPSIVNYNRLIDQFCSFSLPNVA
Sbjct: 121 VPDERTCNVLIARLLHYRSPYCTLRLLACLFDAKPEFVPSIVNYNRLIDQFCSFSLPNVA 180

Query: 181 HRVLFDMKSRGHCPNVVSYTALIDGYSRVGNVSAAEKLFDEMPENDVEPNSLTYSVLIHG 240
           HRVLFDMKSRGH PNVVSYTALIDGY RVGNVSAAEKLFDEMPENDVEPNSLTYSVLI+G
Sbjct: 181 HRVLFDMKSRGHSPNVVSYTALIDGYCRVGNVSAAEKLFDEMPENDVEPNSLTYSVLING 240

Query: 241 FLYKRDFETGKALMCKLWERMKGEIDSSVKSAAFAHLVDSLCLAGSFHEVFLIAEDMPQG 300
           FLYKRDFE GKAL+CKLWERM GE+DSSV +AAFAHLVDSLCL GSFHEVF IAEDMPQG
Sbjct: 241 FLYKRDFEAGKALICKLWERMTGEMDSSVNNAAFAHLVDSLCLVGSFHEVFTIAEDMPQG 300

Query: 301 QSVPEEFAYGQMIDSLCKAKRHHGASRIVYIMRKKGINPGLLSYNSIIHGLSKEGSCMRA 360
           QSVPEEFAYGQMIDSLCKAKR+HGASRIVYIMRKKGINPGLLSYNSIIHGLSKEG CMRA
Sbjct: 301 QSVPEEFAYGQMIDSLCKAKRYHGASRIVYIMRKKGINPGLLSYNSIIHGLSKEGGCMRA 360

Query: 361 YQLLVEGVEFGYSPSEHTYKVLLECLCKELDIQKAKEVLQIMIEKEGVDRTRIYNIYLRA 420
           YQLLVEGVEFGYSPSEHTYKVLLE LC+E DIQKAKEVLQIMI K+GVDRTRIYNIYLRA
Sbjct: 361 YQLLVEGVEFGYSPSEHTYKVLLEGLCEEPDIQKAKEVLQIMIHKQGVDRTRIYNIYLRA 420

Query: 421 VCLTNNSTELLNTLVVMLQTNCHPDVITLNTVIKGFCKVGSIEEALKVLNDMMIGKFCTP 480
           VCLTNNSTELLNTLVVMLQ+NC PDVITLNTVIKGFCKVGSIEEALKVLNDM+ GKFCTP
Sbjct: 421 VCLTNNSTELLNTLVVMLQSNCQPDVITLNTVIKGFCKVGSIEEALKVLNDMIGGKFCTP 480

Query: 481 DCVTFTTIICGLLNVGRIRESLDILYKVMPEKGMVPGVITYNATIRGLFKLQQANQAMDT 540
           D VTFTTI+CGLLNVGRIRESLDILYKVMPEKG+VPGVITYNATIRGLFKLQ+ANQAMDT
Sbjct: 481 DHVTFTTILCGLLNVGRIRESLDILYKVMPEKGIVPGVITYNATIRGLFKLQRANQAMDT 540

Query: 541 FDRMVRNGIQADSTTYAVIIDGLCGSNKIEEVKRFWKDIVWPSKIHDSFVYSAILKGLCH 600
           FDRMVRNGIQADSTTYAV+IDGLC  N+IEEVKRFWKDIVWPSKIHDSFVYSAILKGLC+
Sbjct: 541 FDRMVRNGIQADSTTYAVVIDGLCDCNQIEEVKRFWKDIVWPSKIHDSFVYSAILKGLCN 600

Query: 601 SSKFNEACHFLYELADSGVYPSIFCYNIVINTACKLGLKGEAYQLVTEMRKNGLAPDAVT 660
            SKFNEACHFLYELADSGV P+IFCYNIVINTACKLGLKGEAY+LV EMRKNGLAPDAVT
Sbjct: 601 FSKFNEACHFLYELADSGVSPTIFCYNIVINTACKLGLKGEAYRLVNEMRKNGLAPDAVT 660

Query: 661 WRILHKLHQNEMTQSLP 678
           WRILHKLHQNE T ++P
Sbjct: 661 WRILHKLHQNE-TDTIP 676

BLAST of Lsi06G012880 vs. NCBI nr
Match: gi|1009165426|ref|XP_015901028.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g18020 [Ziziphus jujuba])

HSP 1 Score: 905.6 bits (2339), Expect = 5.4e-260
Identity = 454/703 (64.58%), Postives = 545/703 (77.52%), Query Frame = 1

Query: 4   AAHRSLSIKIVSITSSISIFFTRTANF-LRHQPENG-----SDVREWSPEESVADVSYWT 63
           +A +S + K +S +  I+  FT T     + QP+       +D  E   + S+AD SYWT
Sbjct: 8   SAKKSNTHKSISNSIPIAFLFTDTVPHPSKEQPQRNPIHEINDPVEQEQQVSIADRSYWT 67

Query: 64  KKVHGLCTKDRNVDEALRLLDALRLHGYQLHPLNLGSIIHGLSDARRFHEAHCRFMLSVA 123
           KK+H LC KDRNVDEALRLLD L L GY    LNL SIIH L  + RF EAH R +LSV+
Sbjct: 68  KKIHTLCAKDRNVDEALRLLDRLCLRGYIPDSLNLSSIIHALCGSNRFVEAHRRLLLSVS 127

Query: 124 SR-CVPDERTCNVLLARLLDYRSPYCTLRLLVCLFDAKPEFVPSIVNYNRLIDQFCSFSL 183
           SR CVPDERTCNVL+ARLLD R+P  TL ++  L   K  FVPS++NYNRLIDQ CSFS 
Sbjct: 128 SRHCVPDERTCNVLIARLLDSRNPDATLNVVRRLIYVKHGFVPSLINYNRLIDQLCSFSR 187

Query: 184 PNVAHRVLFDMKSRGHCPNVVSYTALIDGYSRVGNVSAAEKLFDEMPENDVEPNSLTYSV 243
           P+ AH +LFDM+ RGH PN VSYT LI GY ++G+V  A+K+ DEM E  V PNSLTYSV
Sbjct: 188 PDEAHSLLFDMQCRGHFPNTVSYTTLIKGYCKIGDVGCAQKVLDEMGERGVVPNSLTYSV 247

Query: 244 LIHGFLYKRDFETGKALMCKLWERMKGEIDSSVKSAAFAHLVDSLCLAGSFHEVFLIAED 303
           LI G + KRD E G+ LMCKLWE MK E D SV SAAF +L+DSLC+ G FHEVF IAED
Sbjct: 248 LIRGVIRKRDIERGRELMCKLWEIMKCEDDLSVNSAAFTNLIDSLCIEGYFHEVFRIAED 307

Query: 304 MPQGQSVPEEFAYGQMIDSLCKAKRHHGASRIVYIMRKKGINPGLLSYNSIIHGLSKEGS 363
           MPQGQSV EEFAYGQMIDSLCK  ++HG+SRIVYIMRK+G  P  +SY+SIIHGLSKE  
Sbjct: 308 MPQGQSVNEEFAYGQMIDSLCKVGKYHGSSRIVYIMRKRGSVPSTVSYDSIIHGLSKESG 367

Query: 364 CMRAYQLLVEGVEFGYSPSEHTYKVLLECLCKELDIQKAKEVLQIMIEKEGVDRTRIYNI 423
           CMRAYQLL EGVEFG+ PSE+TYKVL+E LC+E D+ KAKEVLQ M+EK+GVDRTRIYNI
Sbjct: 368 CMRAYQLLEEGVEFGFLPSEYTYKVLVEGLCQESDLHKAKEVLQFMLEKKGVDRTRIYNI 427

Query: 424 YLRAVCLTNNSTELLNTLVVMLQTNCHPDVITLNTVIKGFCKVGSIEEALKVLNDMMIGK 483
           YLRA+CL NN+TELLN LV MLQT C PDVITLNTV+ GFCK+G IEEALKVLNDMM+GK
Sbjct: 428 YLRALCLMNNATELLNVLVFMLQTQCQPDVITLNTVVNGFCKMGRIEEALKVLNDMMVGK 487

Query: 484 FCTPDCVTFTTIICGLLNVGRIRESLDILYKVMPEKGMVPGVITYNATIRGLFKLQQANQ 543
           FC PD VTFTTIICGLL+VGR +++L  L+ VM EKG+ PGV+TYNA +RGLFKLQQ+N+
Sbjct: 488 FCAPDAVTFTTIICGLLHVGRTQDALYFLHHVMLEKGVTPGVVTYNAVLRGLFKLQQSNE 547

Query: 544 AMDTFDRMVRNGIQADSTTYAVIIDGLCGSNKIEEVKRFWKDIVWPSKIHDSFVYSAILK 603
           AM+ F+ MV NG+ +DSTTYA+IIDGLC  NKIEE KRFW D++WPSKIHD+FVY+A+LK
Sbjct: 548 AMEIFNDMVSNGVASDSTTYAIIIDGLCKCNKIEEAKRFWDDVIWPSKIHDNFVYAAVLK 607

Query: 604 GLCHSSKFNEACHFLYELADSGVYPSIFCYNIVINTACKLGLKGEAYQLVTEMRKNGLAP 663
           GLC  ++ NEA HFLYEL DSGV P+IF YNI+I++ACKLGLK EAYQ+V EM++NG+AP
Sbjct: 608 GLCCCARLNEALHFLYELVDSGVSPNIFSYNIIIDSACKLGLKNEAYQVVREMKRNGIAP 667

Query: 664 DAVTWRILHKLHQNEMTQSLPKDLTNQPRDRLDQTDLERDSQM 700
           DAVTWRIL KLH     +    D T Q +   ++ ++E + ++
Sbjct: 668 DAVTWRILDKLHGKRSAE----DSTLQSKSGPEEIEMEENVEV 706

BLAST of Lsi06G012880 vs. NCBI nr
Match: gi|802753652|ref|XP_012088542.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g18020 [Jatropha curcas])

HSP 1 Score: 897.1 bits (2317), Expect = 1.9e-257
Identity = 429/648 (66.20%), Postives = 518/648 (79.94%), Query Frame = 1

Query: 24  FTRTANFLRHQPENGSDVREWSPEE-SVADVSYWTKKVHGLCTKDRNVDEALRLLDALRL 83
           F R + F  +Q  N   + +   E  S+A+ SYWT+K+H LCT+ R VDEAL LLD LRL
Sbjct: 16  FIRLSFFSTYQLPNTEPLHQDHEEAISIANRSYWTRKIHDLCTQHRKVDEALALLDHLRL 75

Query: 84  HGYQLHPLNLGSIIHGLSDARRFHEAHCRFMLSVASRCVPDERTCNVLLARLLDYRSPYC 143
            GY+   LNL SIIH L +A RF+EAH RF+LS++S C+PDERTCNV++ARLLD + P+ 
Sbjct: 76  RGYRPDSLNLSSIIHALCEANRFNEAHRRFVLSISSNCIPDERTCNVIIARLLDSQFPHS 135

Query: 144 TLRLLVCLFDAKPEFVPSIVNYNRLIDQFCSFSLPNVAHRVLFDMKSRGHCPNVVSYTAL 203
           T   +  LFD KP+FVPS++NYNRLI Q+C  S PN+ HR+L+DM SRGHCPN+V+YT+L
Sbjct: 136 TFYAICRLFDVKPQFVPSLINYNRLIYQYCEVSHPNIGHRLLYDMISRGHCPNIVTYTSL 195

Query: 204 IDGYSRVGNVSAAEKLFDEMPENDVEPNSLTYSVLIHGFLYKRDFETGKALMCKLWERMK 263
           I+GY RVG VS+A K+FDEM E  + PNSLTYSVLI G L KRD E GK LMC LW+RMK
Sbjct: 196 INGYCRVGEVSSAHKVFDEMHEYGIVPNSLTYSVLIRGVLAKRDVERGKELMCNLWQRMK 255

Query: 264 GEIDSSVKSAAFAHLVDSLCLAGSFHEVFLIAEDMPQGQSVPEEFAYGQMIDSLCKAKRH 323
            E D SV SAAF +L+DSLC  G F++VF IAEDMPQG+ V EEFAYG MIDSLC+  ++
Sbjct: 256 DEEDQSVNSAAFGNLIDSLCREGFFNDVFSIAEDMPQGKCVNEEFAYGHMIDSLCRVGKN 315

Query: 324 HGASRIVYIMRKKGINPGLLSYNSIIHGLSKEGSCMRAYQLLVEGVEFGYSPSEHTYKVL 383
           HGASRIVYIMRK+G  P L+SY+SIIHGL KEG CMRAYQL  EG+EFGY PSE+T+KVL
Sbjct: 316 HGASRIVYIMRKRGFIPSLVSYDSIIHGLCKEGGCMRAYQLFEEGIEFGYLPSEYTFKVL 375

Query: 384 LECLCKELDIQKAKEVLQIMIEKEGVDRTRIYNIYLRAVCLTNNSTELLNTLVVMLQTNC 443
           +E LC+E+DI KA+ VL++M+ K+GVDRTRIYNIY+RA+CL NN+TELLN LV MLQT+C
Sbjct: 376 VEALCQEMDIYKARIVLELMLNKKGVDRTRIYNIYMRALCLMNNATELLNVLVYMLQTDC 435

Query: 444 HPDVITLNTVIKGFCKVGSIEEALKVLNDMMIGKFCTPDCVTFTTIICGLLNVGRIRESL 503
            PDVITLNTVI GFCK+G IEEALKVLNDMM+GKFC PD VTFTTII GLLNVGR  E+L
Sbjct: 436 QPDVITLNTVINGFCKMGRIEEALKVLNDMMMGKFCAPDAVTFTTIIGGLLNVGRSEEAL 495

Query: 504 DILYKVMPEKGMVPGVITYNATIRGLFKLQQANQAMDTFDRMVRNGIQADSTTYAVIIDG 563
           ++L KVM E  + PGV+TYNA +RGLFKLQ AN+AM  F +M+ NG+ ADS TY +IIDG
Sbjct: 496 NLLNKVMLENDISPGVVTYNAVLRGLFKLQLANEAMMVFSKMLGNGVAADSKTYTIIIDG 555

Query: 564 LCGSNKIEEVKRFWKDIVWPSKIHDSFVYSAILKGLCHSSKFNEACHFLYELADSGVYPS 623
           LC S +IE+ K+FW +++WPSK+HD FVY++ILKGLC S   NEACHFLYEL DSGVYP+
Sbjct: 556 LCDSGQIEDAKKFWDEVIWPSKVHDDFVYASILKGLCRSGNLNEACHFLYELIDSGVYPN 615

Query: 624 IFCYNIVINTACKLGLKGEAYQLVTEMRKNGLAPDAVTWRILHKLHQN 671
           I  YNIVI++AC LG+K EAYQ+V EMRKNGL PDAVTWRIL KLH N
Sbjct: 616 IISYNIVIDSACNLGMKKEAYQIVNEMRKNGLTPDAVTWRILDKLHGN 663

BLAST of Lsi06G012880 vs. NCBI nr
Match: gi|297742922|emb|CBI35789.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 893.6 bits (2308), Expect = 2.1e-256
Identity = 429/643 (66.72%), Postives = 510/643 (79.32%), Query Frame = 1

Query: 28  ANFLRHQPENGSDVREWSPEESVADVSYWTKKVHGLCTKDRNVDEALRLLDALRLHGYQL 87
           A F   Q        E   EES+ + ++W++K+H LCT+DRNVDEALRLLD LRL GY+ 
Sbjct: 267 AFFFSAQSTPNQQHEEEKEEESIINKAFWSRKIHNLCTRDRNVDEALRLLDLLRLRGYRP 326

Query: 88  HPLNLGSIIHGLSDARRFHEAHCRFMLSVASRCVPDERTCNVLLARLLDYRSPYCTLRLL 147
             LNL SIIH L DA RF EAH R +LS AS CVPD+RTCNVL+ARLLD R+P+ TL + 
Sbjct: 327 DSLNLSSIIHALCDANRFSEAHHRLLLSFASHCVPDQRTCNVLIARLLDSRTPHATLHVF 386

Query: 148 VCLFDAKPEFVPSIVNYNRLIDQFCSFSLPNVAHRVLFDMKSRGHCPNVVSYTALIDGYS 207
             L  A+PEFVPS++NYNRLI Q CSFS PN AH + FDM+SRGHCPN VSYT LIDGY 
Sbjct: 387 RGLIAARPEFVPSLINYNRLIHQLCSFSQPNEAHGLFFDMRSRGHCPNAVSYTTLIDGYC 446

Query: 208 RVGNVSAAEKLFDEMPENDVEPNSLTYSVLIHGFLYKRDFETGKALMCKLWERMKGEIDS 267
           ++G  ++A KLFDEM E+ V PNSLTYSVL+ G L KRD E G+ LMCKLW++M  E D 
Sbjct: 447 KIGEETSAWKLFDEMLESGVVPNSLTYSVLLKGVLCKRDVERGRELMCKLWQKMMDENDP 506

Query: 268 SVKSAAFAHLVDSLCLAGSFHEVFLIAEDMPQGQSVPEEFAYGQMIDSLCKAKRHHGASR 327
           SV +AAFA+L+DSLC  G F EVF IAEDMPQG+SV EEF YGQMIDSLC+  R+HGASR
Sbjct: 507 SVNNAAFANLIDSLCKEGFFLEVFRIAEDMPQGKSVSEEFVYGQMIDSLCRCGRNHGASR 566

Query: 328 IVYIMRKKGINPGLLSYNSIIHGLSKEGSCMRAYQLLVEGVEFGYSPSEHTYKVLLECLC 387
           IVYIMRK+G  P L+SYN I+HGLSKEG CMRAYQLL EGVEFGY  SEHTYKVLLE LC
Sbjct: 567 IVYIMRKRGFFPSLVSYNYIVHGLSKEGGCMRAYQLLKEGVEFGYMMSEHTYKVLLEALC 626

Query: 388 KELDIQKAKEVLQIMIEKEGVDRTRIYNIYLRAVCLTNNSTELLNTLVVMLQTNCHPDVI 447
           ++ D+ KA+EV+Q+M+ KEGVD+TRIYNIYLRA+CL NN TELLN LV MLQT C PDVI
Sbjct: 627 RDADLCKAREVMQLMLNKEGVDQTRIYNIYLRALCLMNNPTELLNVLVFMLQTQCQPDVI 686

Query: 448 TLNTVIKGFCKVGSIEEALKVLNDMMIGKFCTPDCVTFTTIICGLLNVGRIRESLDILYK 507
           TLNTVI GFCK+G +EEALKVL+DM++GKFC PD VT+TTIICGLLN+GR  E+LD+L +
Sbjct: 687 TLNTVINGFCKMGRVEEALKVLDDMVMGKFCAPDSVTYTTIICGLLNLGRTEEALDVLRR 746

Query: 508 VMPEKGMVPGVITYNATIRGLFKLQQANQAMDTFDRMVRNGIQADSTTYAVIIDGLCGSN 567
           VMPEKG  PGV+T+NA + GLFKLQQAN A + F+ MV +G+ A++ TY +IIDGL  S+
Sbjct: 747 VMPEKGFKPGVVTFNAVLHGLFKLQQANVATEVFNSMVSDGVAANTITYTIIIDGLFESD 806

Query: 568 KIEEVKRFWKDIVWPSKIHDSFVYSAILKGLCHSSKFNEACHFLYELADSGVYPSIFCYN 627
           +I+E KRFW D++WPSK+HD+FVY+AILKGLC S K NEAC FLYEL D GV  ++  YN
Sbjct: 807 QIDEAKRFWDDVIWPSKVHDNFVYAAILKGLCRSGKLNEACDFLYELVDCGVTLNVVNYN 866

Query: 628 IVINTACKLGLKGEAYQLVTEMRKNGLAPDAVTWRILHKLHQN 671
           I+I+ ACKLG K EAY +V EM+KNGL PDAVTWRILHKLH N
Sbjct: 867 ILIDHACKLGSKREAYTIVQEMKKNGLTPDAVTWRILHKLHGN 909

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
PP240_ARATH6.5e-22155.75Pentatricopeptide repeat-containing protein At3g18020 OS=Arabidopsis thaliana GN... [more]
PPR91_ARATH1.7e-5928.46Pentatricopeptide repeat-containing protein At1g62670, mitochondrial OS=Arabidop... [more]
PP445_ARATH2.0e-5727.51Pentatricopeptide repeat-containing protein At5g65560 OS=Arabidopsis thaliana GN... [more]
PPR96_ARATH5.9e-5726.74Pentatricopeptide repeat-containing protein At1g62930, chloroplastic OS=Arabidop... [more]
PPR94_ARATH2.9e-5626.55Pentatricopeptide repeat-containing protein At1g62910 OS=Arabidopsis thaliana GN... [more]
Match NameE-valueIdentityDescription
A0A0A0LV25_CUCSA0.0e+0091.59Uncharacterized protein OS=Cucumis sativus GN=Csa_1G025030 PE=4 SV=1[more]
A0A067JM78_JATCU1.3e-25766.20Uncharacterized protein OS=Jatropha curcas GN=JCGZ_27078 PE=4 SV=1[more]
F6HXK7_VITVI1.5e-25666.72Putative uncharacterized protein OS=Vitis vinifera GN=VIT_09s0002g00230 PE=4 SV=... [more]
W9RFH5_9ROSA5.3e-25462.82Uncharacterized protein OS=Morus notabilis GN=L484_017380 PE=4 SV=1[more]
M5W8V4_PRUPE5.8e-25366.21Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppb014337mg PE=4 S... [more]
Match NameE-valueIdentityDescription
AT3G18020.13.6e-22255.75 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT1G62670.19.4e-6128.46 rna processing factor 2[more]
AT5G65560.11.1e-5827.51 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT1G62930.13.3e-5826.74 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT1G62910.11.7e-5726.55 Pentatricopeptide repeat (PPR) superfamily protein[more]
Match NameE-valueIdentityDescription
gi|778656480|ref|XP_011649150.1|0.0e+0091.59PREDICTED: pentatricopeptide repeat-containing protein At3g18020 [Cucumis sativu... [more]
gi|659106953|ref|XP_008453476.1|0.0e+0091.29PREDICTED: pentatricopeptide repeat-containing protein At3g18020 [Cucumis melo][more]
gi|1009165426|ref|XP_015901028.1|5.4e-26064.58PREDICTED: pentatricopeptide repeat-containing protein At3g18020 [Ziziphus jujub... [more]
gi|802753652|ref|XP_012088542.1|1.9e-25766.20PREDICTED: pentatricopeptide repeat-containing protein At3g18020 [Jatropha curca... [more]
gi|297742922|emb|CBI35789.3|2.1e-25666.72unnamed protein product [Vitis vinifera][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0006869 lipid transport
biological_process GO:0006749 glutathione metabolic process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0046872 metal ion binding
molecular_function GO:0005319 lipid transporter activity
molecular_function GO:0004364 glutathione transferase activity
molecular_function GO:0005515 protein binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi06G012880.1Lsi06G012880.1mRNA


Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 590..619
score: 0.24coord: 163..191
score: 0.14coord: 308..337
score: 0
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 194..241
score: 7.4E-18coord: 516..564
score: 7.6E-14coord: 621..664
score: 9.2E-10coord: 341..388
score: 3.4E-8coord: 444..492
score: 1.3
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 447..482
score: 6.2E-8coord: 519..552
score: 5.3E-5coord: 164..196
score: 0.001coord: 377..405
score: 0.0027coord: 308..339
score: 1.7E-4coord: 197..230
score: 5.2E-10coord: 483..517
score: 8.2E-4coord: 624..658
score: 7.8E-6coord: 590..622
score: 2.
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 340..374
score: 8.966coord: 375..405
score: 8.342coord: 517..551
score: 10.008coord: 52..87
score: 8.473coord: 160..194
score: 9.032coord: 587..621
score: 10.556coord: 481..516
score: 10.348coord: 622..656
score: 10.983coord: 552..582
score: 7.53coord: 270..304
score: 6.796coord: 445..480
score: 11.213coord: 410..444
score: 6.336coord: 88..122
score: 5.755coord: 230..260
score: 6.708coord: 195..229
score: 13.219coord: 305..339
score: 9
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 52..248
score: 5.1E-284coord: 289..663
score: 5.1E
NoneNo IPR availablePANTHERPTHR24015:SF310SUBFAMILY NOT NAMEDcoord: 289..663
score: 5.1E-284coord: 52..248
score: 5.1E

The following gene(s) are paralogous to this gene:

None