Lsi06G011130 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi06G011130
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionCysteine-rich venom protein
Locationchr06 : 21418627 .. 21419229 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATAAGCAGCTGCAACTAGCTCTGTTTCTATTTCTAGCGATCGTCTTTACGCCCCAAGTACTCTCTCACAACATTTCTCAAACACCTGGTGTGCAAGTGCAAATAAACAAGCAAAAACAGGTGGACAACGAAACCATGTACAGAATGTCGAAGCAACTCTGCTGGGGCTGCATTAGCGAGTCAATAGAGTTTCTATTCGCGCACAATCTGGTTCGAGCGGCCAAGTTTGAGTTGCCATTGGCATGGAATTTTCAGTTGGAGAAGTATGCCAGGTGGTGGGCAGGGCAGAGGAAAGGGGATTGTAAACTTCAACATTCTTTCCCTGAAGACGATTTCAAGCTGGGAGAGAACATATTTTGGGGGAGTGGATCGGCGTGGAGACCAGTGGATGCGGTGACTGCGTGGGCTAGCGAAGTCAAGTACTACACTTACGCCACCAACAGCTGCGAGTCTGGCCAAATGTGCGGCCATTACACACAGATCGTTTGGAGAAATACGCAAAGGATCGGCTGCGCTCGTGTCGTTTGTGACAATGGGGATATCTTCATGACTTGTAACTATGATCCCCCTGGTAACTATGTGGGCGAGCGACCCTACTAA

mRNA sequence

ATGAATAAGCAGCTGCAACTAGCTCTGTTTCTATTTCTAGCGATCGTCTTTACGCCCCAAGTACTCTCTCACAACATTTCTCAAACACCTGGTGTGCAAGTGCAAATAAACAAGCAAAAACAGGTGGACAACGAAACCATGTACAGAATGTCGAAGCAACTCTGCTGGGGCTGCATTAGCGAGTCAATAGAGTTTCTATTCGCGCACAATCTGGTTCGAGCGGCCAAGTTTGAGTTGCCATTGGCATGGAATTTTCAGTTGGAGAAGTATGCCAGGTGGTGGGCAGGGCAGAGGAAAGGGGATTGTAAACTTCAACATTCTTTCCCTGAAGACGATTTCAAGCTGGGAGAGAACATATTTTGGGGGAGTGGATCGGCGTGGAGACCAGTGGATGCGGTGACTGCGTGGGCTAGCGAAGTCAAGTACTACACTTACGCCACCAACAGCTGCGAGTCTGGCCAAATGTGCGGCCATTACACACAGATCGTTTGGAGAAATACGCAAAGGATCGGCTGCGCTCGTGTCGTTTGTGACAATGGGGATATCTTCATGACTTGTAACTATGATCCCCCTGGTAACTATGTGGGCGAGCGACCCTACTAA

Coding sequence (CDS)

ATGAATAAGCAGCTGCAACTAGCTCTGTTTCTATTTCTAGCGATCGTCTTTACGCCCCAAGTACTCTCTCACAACATTTCTCAAACACCTGGTGTGCAAGTGCAAATAAACAAGCAAAAACAGGTGGACAACGAAACCATGTACAGAATGTCGAAGCAACTCTGCTGGGGCTGCATTAGCGAGTCAATAGAGTTTCTATTCGCGCACAATCTGGTTCGAGCGGCCAAGTTTGAGTTGCCATTGGCATGGAATTTTCAGTTGGAGAAGTATGCCAGGTGGTGGGCAGGGCAGAGGAAAGGGGATTGTAAACTTCAACATTCTTTCCCTGAAGACGATTTCAAGCTGGGAGAGAACATATTTTGGGGGAGTGGATCGGCGTGGAGACCAGTGGATGCGGTGACTGCGTGGGCTAGCGAAGTCAAGTACTACACTTACGCCACCAACAGCTGCGAGTCTGGCCAAATGTGCGGCCATTACACACAGATCGTTTGGAGAAATACGCAAAGGATCGGCTGCGCTCGTGTCGTTTGTGACAATGGGGATATCTTCATGACTTGTAACTATGATCCCCCTGGTAACTATGTGGGCGAGCGACCCTACTAA

Protein sequence

MNKQLQLALFLFLAIVFTPQVLSHNISQTPGVQVQINKQKQVDNETMYRMSKQLCWGCISESIEFLFAHNLVRAAKFELPLAWNFQLEKYARWWAGQRKGDCKLQHSFPEDDFKLGENIFWGSGSAWRPVDAVTAWASEVKYYTYATNSCESGQMCGHYTQIVWRNTQRIGCARVVCDNGDIFMTCNYDPPGNYVGERPY
Homology
[Close]
BLAST of Lsi06G011130 vs. Swiss-Prot
Match: PR1_MEDTR (Pathogenesis-related protein PR-1 OS=Medicago truncatula GN=PR-1 PE=2 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 4.1e-43
Identity = 77/138 (55.80%), Postives = 95/138 (68.84%), Query Frame = 1 

Query: 64  EFLFAHNLVRAAKFELPLAWNFQLEKYARWWAGQRKGDCKLQHSFPEDDFKLGENIFWGS 123
           +FL   N+ RAA    PL W+ +L  YA+W+A QR+ DC L+HS    +   GENIFWGS
Sbjct: 40  QFLIPQNIARAAVGLRPLVWDDKLTHYAQWYANQRRNDCALEHS----NGPYGENIFWGS 99

Query: 124 GSAWRPVDAVTAWASEVKYYTYATNSCESGQMCGHYTQIVWRNTQRIGCARVVC-DNGDI 183
           G  W P  AV+AW  E ++Y Y  NSC  G+MCGHYTQ+VW +T ++GCA VVC D+   
Sbjct: 100 GVGWNPAQAVSAWVDEKQFYNYWHNSCVDGEMCGHYTQVVWGSTTKVGCASVVCSDDKGT 159

Query: 184 FMTCNYDPPGNYVGERPY 201
           FMTCNYDPPGNY GERPY
Sbjct: 160 FMTCNYDPPGNYYGERPY 173

[Close]
BLAST of Lsi06G011130 vs. Swiss-Prot
Match: PRMS_MAIZE (Pathogenesis-related protein PRMS OS=Zea mays GN=PRMS PE=2 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 1.1e-37
Identity = 73/139 (52.52%), Postives = 95/139 (68.35%), Query Frame = 1 

Query: 64  EFLFAHNLVRAAKFELPLAWNFQLEKYARWWAGQRKGDCKLQHSFPEDDFKLGENIFWGS 123
           ++L   N  RAA    P+ W+ +L+++A  +A QR GDC+LQHS        GENIFWGS
Sbjct: 33  DYLTPQNSARAAVGVGPVTWSTKLQQFAEKYAAQRAGDCRLQHS----GGPYGENIFWGS 92

Query: 124 -GSAWRPVDAVTAWASEVKYYTYATNSCESGQMCGHYTQIVWRNTQRIGCARVVC-DNGD 183
            G  W+ VDAV +W  E ++Y YATNSC +G++CGHYTQ+VWR T  IGCARVVC DN  
Sbjct: 93  AGFDWKAVDAVRSWVDEKQWYNYATNSCAAGKVCGHYTQVVWRATTSIGCARVVCRDNRG 152

Query: 184 IFMTCNYDPPGNYVGERPY 201
           +F+ CNY+P GN  G +PY
Sbjct: 153 VFIICNYEPRGNIAGMKPY 167

[Close]
BLAST of Lsi06G011130 vs. Swiss-Prot
Match: PR13_HORVU (Pathogenesis-related protein PRB1-3 OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 2.8e-36
Identity = 70/139 (50.36%), Postives = 97/139 (69.78%), Query Frame = 1 

Query: 64  EFLFAHNLVRAAKFELPLAWNFQLEKYARWWAGQRKGDCKLQHSFPEDDFKLGENIFWGS 123
           +++  HN  RAA     ++W+ +L+ +A+ +A QR  DCKLQHS        GENIFWGS
Sbjct: 30  DYVSPHNAARAAVGVGAVSWSTKLQAFAQNYANQRINDCKLQHS----GGPYGENIFWGS 89

Query: 124 -GSAWRPVDAVTAWASEVKYYTYATNSCESGQMCGHYTQIVWRNTQRIGCARVVCDNG-D 183
            G+ W+  DAV +W SE K Y Y +N+C +G++CGHYTQ+VWR +  IGCARVVC+N   
Sbjct: 90  AGADWKASDAVNSWVSEKKDYDYGSNTCAAGKVCGHYTQVVWRASTSIGCARVVCNNNRG 149

Query: 184 IFMTCNYDPPGNYVGERPY 201
           +F+TCNY+P GN VG++PY
Sbjct: 150 VFITCNYEPRGNIVGQKPY 164

[Close]
BLAST of Lsi06G011130 vs. Swiss-Prot
Match: PR12_HORVU (Pathogenesis-related protein PRB1-2 OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 6.3e-36
Identity = 68/139 (48.92%), Postives = 97/139 (69.78%), Query Frame = 1 

Query: 64  EFLFAHNLVRAAKFELPLAWNFQLEKYARWWAGQRKGDCKLQHSFPEDDFKLGENIFWGS 123
           +++  HN  R+A     ++W+ +L+ +A+ +A QR  DCKLQHS        GENIFWGS
Sbjct: 30  DYVSPHNAARSAVGVGAVSWSTKLQAFAQNYANQRINDCKLQHS----GGPYGENIFWGS 89

Query: 124 -GSAWRPVDAVTAWASEVKYYTYATNSCESGQMCGHYTQIVWRNTQRIGCARVVCDNG-D 183
            G+ W+  DAV +W +E K Y Y +N+C +G++CGHYTQ+VWR +  IGCARVVC+N   
Sbjct: 90  AGADWKAADAVNSWVNEKKDYNYGSNTCAAGKVCGHYTQVVWRASTSIGCARVVCNNNRG 149

Query: 184 IFMTCNYDPPGNYVGERPY 201
           +F+TCNY+P GN VG++PY
Sbjct: 150 VFITCNYEPRGNIVGQKPY 164

[Close]
BLAST of Lsi06G011130 vs. Swiss-Prot
Match: PR1C_TOBAC (Pathogenesis-related protein 1C OS=Nicotiana tabacum PE=2 SV=3)

HSP 1 Score: 151.8 bits (382), Expect = 8.2e-36
Identity = 66/137 (48.18%), Postives = 88/137 (64.23%), Query Frame = 1 

Query: 64  EFLFAHNLVRAAKFELPLAWNFQLEKYARWWAGQRKGDCKLQHSFPEDDFKLGENIFWGS 123
           ++L AHN  RA     PL W+ Q+  YA+ +A Q   DC L HS  +     GEN+ WGS
Sbjct: 36  DYLDAHNTARADVGVEPLTWDDQVAAYAQNYASQLAADCNLVHSHGQ----YGENLAWGS 95

Query: 124 GSAWRPVDAVTAWASEVKYYTYATNSCESGQMCGHYTQIVWRNTQRIGCARVVCDNGDIF 183
           G       AV  W +E +YY + +N+C  GQ+CGHYTQ+VWRN+ R+GCARV C+NG   
Sbjct: 96  GDFLTAAKAVEMWVNEKQYYAHDSNTCAQGQVCGHYTQVVWRNSVRVGCARVQCNNGGYI 155

Query: 184 MTCNYDPPGNYVGERPY 201
           ++CNYDPPGN +G+ PY
Sbjct: 156 VSCNYDPPGNVIGKSPY 168

[Close]
BLAST of Lsi06G011130 vs. TrEMBL
Match: A0A0A0LUG8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G420360 PE=3 SV=1)

HSP 1 Score: 404.1 bits (1037), Expect = 1.0e-109
Identity = 183/200 (91.50%), Postives = 192/200 (96.00%), Query Frame = 1 

Query: 1   MNKQLQLALFLFLAIVFTPQVLSHNISQTPGVQVQINKQKQVDNETMYRMSKQLCWGCIS 60
           MNKQLQL +FL L  VF P+VLSHN SQTPGVQVQI KQ QVDNET+YR+SKQLCWGCIS
Sbjct: 1   MNKQLQLPVFLVLLTVFMPRVLSHNFSQTPGVQVQIYKQNQVDNETIYRVSKQLCWGCIS 60

Query: 61  ESIEFLFAHNLVRAAKFELPLAWNFQLEKYARWWAGQRKGDCKLQHSFPEDDFKLGENIF 120
           ESIEFLFAHNLVRAAKFELPLAWNFQLEKYARWWAGQRKGDCKLQHSFPEDDFKLGENIF
Sbjct: 61  ESIEFLFAHNLVRAAKFELPLAWNFQLEKYARWWAGQRKGDCKLQHSFPEDDFKLGENIF 120

Query: 121 WGSGSAWRPVDAVTAWASEVKYYTYATNSCESGQMCGHYTQIVWRNTQRIGCARVVCDNG 180
           WGSGSAWRP+DAVT+WASEVKYYTYATNSCE+GQMCGHYTQIVWRNTQR+GCARVVCDNG
Sbjct: 121 WGSGSAWRPLDAVTSWASEVKYYTYATNSCEAGQMCGHYTQIVWRNTQRMGCARVVCDNG 180

Query: 181 DIFMTCNYDPPGNYVGERPY 201
           DIFMTCNYDPPGNY+GERPY
Sbjct: 181 DIFMTCNYDPPGNYLGERPY 200

[Close]
BLAST of Lsi06G011130 vs. TrEMBL
Match: I3SHL8_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1)

HSP 1 Score: 317.4 bits (812), Expect = 1.3e-83
Identity = 139/194 (71.65%), Postives = 161/194 (82.99%), Query Frame = 1 

Query: 7   LALFLFLAIVFTPQVLSHNISQTPGVQVQINKQKQVDNETMYRMSKQLCWGCISESIEFL 66
           L LFLF  ++  PQ    + S  P    Q+  +K  DNET+Y++SKQLCWGCI ES+EFL
Sbjct: 5   LILFLFFLVLANPQ----SASSVPQTHNQLTPKKIPDNETIYKVSKQLCWGCIGESLEFL 64

Query: 67  FAHNLVRAAKFELPLAWNFQLEKYARWWAGQRKGDCKLQHSFPEDDFKLGENIFWGSGSA 126
           F HN+VRAAK+E PL W+FQL+ YARWWAGQRK DCK++HSFPE+DFKLGENIFWGSGSA
Sbjct: 65  FRHNMVRAAKWESPLMWDFQLQSYARWWAGQRKPDCKVEHSFPENDFKLGENIFWGSGSA 124

Query: 127 WRPVDAVTAWASEVKYYTYATNSCESGQMCGHYTQIVWRNTQRIGCARVVCDNGDIFMTC 186
           W P DAV AWA E KYYTYATN+CE GQMCGHYTQIVW+NT+R+GCARVVCD+GD+FMTC
Sbjct: 125 WTPTDAVKAWADEEKYYTYATNTCEEGQMCGHYTQIVWKNTKRVGCARVVCDDGDVFMTC 184

Query: 187 NYDPPGNYVGERPY 201
           NYDP GNYVGERPY
Sbjct: 185 NYDPVGNYVGERPY 194

[Close]
BLAST of Lsi06G011130 vs. TrEMBL
Match: A0A0B2RR83_GLYSO (Pathogenesis-related protein PR-1 OS=Glycine soja GN=glysoja_032969 PE=3 SV=1)

HSP 1 Score: 317.0 bits (811), Expect = 1.6e-83
Identity = 143/196 (72.96%), Postives = 167/196 (85.20%), Query Frame = 1 

Query: 7   LALFLFLAIV-FTPQVLSHNISQTPGVQV-QINKQKQVDNETMYRMSKQLCWGCISESIE 66
           L LFL + +V FT  V + +I+      + Q+ +QK+ DNET+YR+SKQLCWGCI+ES+E
Sbjct: 5   LVLFLLMILVTFTSNVNTLSINPKSNSSIPQLTQQKRPDNETIYRVSKQLCWGCIAESLE 64

Query: 67  FLFAHNLVRAAKFELPLAWNFQLEKYARWWAGQRKGDCKLQHSFPEDDFKLGENIFWGSG 126
           FLF HNLVRAAK+ELPL W+FQLE+YARWWAGQRK DCKL+HSFPED FKLGENI+WGSG
Sbjct: 65  FLFRHNLVRAAKWELPLMWDFQLEQYARWWAGQRKADCKLEHSFPEDGFKLGENIYWGSG 124

Query: 127 SAWRPVDAVTAWASEVKYYTYATNSCESGQMCGHYTQIVWRNTQRIGCARVVCDNGDIFM 186
           SAW P DAV AWA E KYYTYATN+C  GQMCGHYTQIVW++T+RIGCARVVCD+GD+FM
Sbjct: 125 SAWTPSDAVRAWADEEKYYTYATNTCVPGQMCGHYTQIVWKSTRRIGCARVVCDDGDVFM 184

Query: 187 TCNYDPPGNYVGERPY 201
           TCNYDP GNYVGERPY
Sbjct: 185 TCNYDPVGNYVGERPY 200

[Close]
BLAST of Lsi06G011130 vs. TrEMBL
Match: I1LVT9_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_13G094100 PE=3 SV=1)

HSP 1 Score: 315.8 bits (808), Expect = 3.6e-83
Identity = 142/196 (72.45%), Postives = 167/196 (85.20%), Query Frame = 1 

Query: 7   LALFLFLAIV-FTPQVLSHNISQTPGVQV-QINKQKQVDNETMYRMSKQLCWGCISESIE 66
           L LFL + +V FT  V + +I+      + Q+ +QK+ DNET+YR+SKQLCWGCI+ES+E
Sbjct: 5   LVLFLLMILVTFTSNVNTLSINPKSNSSIPQLTQQKRPDNETIYRVSKQLCWGCIAESLE 64

Query: 67  FLFAHNLVRAAKFELPLAWNFQLEKYARWWAGQRKGDCKLQHSFPEDDFKLGENIFWGSG 126
           FLF HNLVRAAK+ELPL W+FQLE+YARWWAG+RK DCKL+HSFPED FKLGENI+WGSG
Sbjct: 65  FLFRHNLVRAAKWELPLMWDFQLEQYARWWAGERKADCKLEHSFPEDGFKLGENIYWGSG 124

Query: 127 SAWRPVDAVTAWASEVKYYTYATNSCESGQMCGHYTQIVWRNTQRIGCARVVCDNGDIFM 186
           SAW P DAV AWA E KYYTYATN+C  GQMCGHYTQIVW++T+RIGCARVVCD+GD+FM
Sbjct: 125 SAWTPSDAVRAWADEEKYYTYATNTCVPGQMCGHYTQIVWKSTRRIGCARVVCDDGDVFM 184

Query: 187 TCNYDPPGNYVGERPY 201
           TCNYDP GNYVGERPY
Sbjct: 185 TCNYDPVGNYVGERPY 200

[Close]
BLAST of Lsi06G011130 vs. TrEMBL
Match: A0A151SRL6_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_003695 PE=3 SV=1)

HSP 1 Score: 314.7 bits (805), Expect = 8.1e-83
Identity = 140/200 (70.00%), Postives = 167/200 (83.50%), Query Frame = 1 

Query: 4   QLQLALFLFLAIVFTPQVLSHNISQTPGVQVQI---NKQKQVDNETMYRMSKQLCWGCIS 63
           +  L LFL L + F+    ++++S +P  +  I   ++QK+ DNET+Y++SKQLCWGCI+
Sbjct: 2   ETHLVLFLLLLVTFSSH--ANSLSTSPKYKSSIPELSQQKRPDNETIYKVSKQLCWGCIA 61

Query: 64  ESIEFLFAHNLVRAAKFELPLAWNFQLEKYARWWAGQRKGDCKLQHSFPEDDFKLGENIF 123
           ES+EFLF HNLVRAAK+E PL W+FQLE+YARWWAGQRKGDCKL+HSFPED FKLGENIF
Sbjct: 62  ESLEFLFRHNLVRAAKWEFPLMWDFQLEQYARWWAGQRKGDCKLEHSFPEDGFKLGENIF 121

Query: 124 WGSGSAWRPVDAVTAWASEVKYYTYATNSCESGQMCGHYTQIVWRNTQRIGCARVVCDNG 183
           WGSGS W P DAV  WA E KYYTYATN+C  GQMCGHYTQIVW++T+RIGCARVVCD+G
Sbjct: 122 WGSGSTWTPSDAVRVWADEEKYYTYATNTCVPGQMCGHYTQIVWKSTRRIGCARVVCDDG 181

Query: 184 DIFMTCNYDPPGNYVGERPY 201
           D+FMTCNYDP GNYVGERPY
Sbjct: 182 DVFMTCNYDPVGNYVGERPY 199

[Close]
BLAST of Lsi06G011130 vs. TAIR10
Match: AT4G25780.1 (AT4G25780.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein)

HSP 1 Score: 243.0 bits (619), Expect = 1.5e-64
Identity = 98/154 (63.64%), Postives = 127/154 (82.47%), Query Frame = 1 

Query: 47  MYRMSKQLCWGCISESIEFLFAHNLVRAAKFELPLAWNFQLEKYARWWAGQRKGDCKLQH 106
           ++R+ K LC GC  +S++FLF HNLVRAA+FE PL W+ +L+ YA+ WA QR+GDC L+H
Sbjct: 37  VFRICKNLCPGCDHDSLQFLFRHNLVRAARFEPPLIWDRRLQNYAQGWANQRRGDCALRH 96

Query: 107 SFPEDDFKLGENIFWGSGSAWRPVDAVTAWASEVKYYTYATNSCESGQMCGHYTQIVWRN 166
           S    +F LGENI+WG G+ W P DAV AWASE ++Y Y +N+C++GQMCGHYTQIVW++
Sbjct: 97  SVSNGEFNLGENIYWGYGANWSPADAVVAWASEKRFYHYGSNTCDAGQMCGHYTQIVWKS 156

Query: 167 TQRIGCARVVCDNGDIFMTCNYDPPGNYVGERPY 201
           T+R+GCARVVCDNG IFMTCNYDPPGNY+G++PY
Sbjct: 157 TRRVGCARVVCDNGGIFMTCNYDPPGNYIGQKPY 190

[Close]
BLAST of Lsi06G011130 vs. TAIR10
Match: AT5G57625.1 (AT5G57625.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein)

HSP 1 Score: 176.8 bits (447), Expect = 1.3e-44
Identity = 78/137 (56.93%), Postives = 97/137 (70.80%), Query Frame = 1 

Query: 65  FLFAHNLVRAAKFELPLAWNFQLEKYARWWAGQRKGDCKLQHSFPEDDFKLGENIFWGSG 124
           FL  HN +R+     PL W+ +L  YA WWA QR+ DC L HS        GEN+FWGSG
Sbjct: 75  FLDPHNALRSGLGLPPLIWDGKLASYATWWANQRRYDCSLTHSTGP----YGENLFWGSG 134

Query: 125 SAWRPVDAVTAWASEVKYYTYATNSCESGQMCGHYTQIVWRNTQRIGCARVVCDNG-DIF 184
           S+W P  AV +W  E + Y + TNSC+   MCGHYTQ+VWR+T+R+GCARVVC+NG  +F
Sbjct: 135 SSWAPGFAVQSWIVEGRSYNHNTNSCDGSGMCGHYTQMVWRDTKRLGCARVVCENGAGVF 194

Query: 185 MTCNYDPPGNYVGERPY 201
           +TCNYDPPGNYVGE+PY
Sbjct: 195 ITCNYDPPGNYVGEKPY 207

[Close]
BLAST of Lsi06G011130 vs. TAIR10
Match: AT4G30320.1 (AT4G30320.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein)

HSP 1 Score: 176.4 bits (446), Expect = 1.7e-44
Identity = 76/147 (51.70%), Postives = 99/147 (67.35%), Query Frame = 1 

Query: 55  CWGCISESIEFLFAHNLVRAAKFELPLAWNFQLEKYARWWAGQRKGDCKLQHSFPEDDFK 114
           C  C +   +F+   N  RA     PL W+ +L +YA+WWA QR+GDC L HS    +  
Sbjct: 20  CCHCATYQEQFMGPQNAARAHLRLKPLKWDAKLARYAQWWANQRRGDCALTHS----NGP 79

Query: 115 LGENIFWGSGSAWRPVDAVTAWASEVKYYTYATNSCESGQMCGHYTQIVWRNTQRIGCAR 174
            GEN+FWGSG+ W P  A   W SE + Y Y +NSC S +MCGHYTQIVW+NTQ+IGCA 
Sbjct: 80  YGENLFWGSGNRWGPSQAAYGWLSEARSYNYRSNSCNS-EMCGHYTQIVWKNTQKIGCAH 139

Query: 175 VVCD-NGDIFMTCNYDPPGNYVGERPY 201
           V+C+  G +F+TCNYDPPGN++G +PY
Sbjct: 140 VICNGGGGVFLTCNYDPPGNFLGRKPY 161

[Close]
BLAST of Lsi06G011130 vs. TAIR10
Match: AT4G25790.1 (AT4G25790.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein)

HSP 1 Score: 175.3 bits (443), Expect = 3.9e-44
Identity = 78/138 (56.52%), Postives = 94/138 (68.12%), Query Frame = 1 

Query: 64  EFLFAHNLVRAAKFELPLAWNFQLEKYARWWAGQRKGDCKLQHSFPEDDFKLGENIFWGS 123
           +FL  HN VR      PL W+ ++  YA WWA QR+ DC L HS        GEN+FWGS
Sbjct: 77  QFLDPHNTVRGGLGLPPLVWDVKIASYATWWANQRRYDCSLTHSTGP----YGENLFWGS 136

Query: 124 GSAWRPVDAVTAWASEVKYYTYATNSCESGQMCGHYTQIVWRNTQRIGCARVVCDNG-DI 183
           GS +    AV +W  E K Y + TN+CE   MCGHYTQIVWR T+R+GCARVVC+NG  +
Sbjct: 137 GSDFTSTFAVESWTVEAKSYNHMTNTCEGDGMCGHYTQIVWRETRRLGCARVVCENGAGV 196

Query: 184 FMTCNYDPPGNYVGERPY 201
           F+TCNYDPPGNYVGE+PY
Sbjct: 197 FITCNYDPPGNYVGEKPY 210

[Close]
BLAST of Lsi06G011130 vs. TAIR10
Match: AT1G01310.1 (AT1G01310.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein)

HSP 1 Score: 164.9 bits (416), Expect = 5.3e-41
Identity = 74/139 (53.24%), Postives = 89/139 (64.03%), Query Frame = 1 

Query: 62  SIEFLFAHNLVRAAKFELPLAWNFQLEKYARWWAGQRKGDCKLQHSFPEDDFKLGENIFW 121
           S EFL AHNLVRA   E P  W+ +L  YAR WA QR GDC+L HS    +   GENIFW
Sbjct: 85  SREFLIAHNLVRARVGEPPFQWDGRLAAYARTWANQRVGDCRLVHS----NGPYGENIFW 144

Query: 122 GSGSAWRPVDAVTAWASEVKYYTYATNSCESGQMCGHYTQIVWRNTQRIGCARVVCDNGD 181
              + W P D V  WA E K+Y    N+CE   MCGHYTQIVWR++ ++GCA V C NG 
Sbjct: 145 AGKNNWSPRDIVNVWADEDKFYDVKGNTCEPQHMCGHYTQIVWRDSTKVGCASVDCSNGG 204

Query: 182 IFMTCNYDPPGNYVGERPY 201
           ++  C Y+PPGNY GE P+
Sbjct: 205 VYAICVYNPPGNYEGENPF 219

[Close]
BLAST of Lsi06G011130 vs. NCBI nr
Match: gi|449457125|ref|XP_004146299.1| (PREDICTED: pathogenesis-related protein PR-1 [Cucumis sativus])

HSP 1 Score: 404.1 bits (1037), Expect = 1.5e-109
Identity = 183/200 (91.50%), Postives = 192/200 (96.00%), Query Frame = 1 

Query: 1   MNKQLQLALFLFLAIVFTPQVLSHNISQTPGVQVQINKQKQVDNETMYRMSKQLCWGCIS 60
           MNKQLQL +FL L  VF P+VLSHN SQTPGVQVQI KQ QVDNET+YR+SKQLCWGCIS
Sbjct: 1   MNKQLQLPVFLVLLTVFMPRVLSHNFSQTPGVQVQIYKQNQVDNETIYRVSKQLCWGCIS 60

Query: 61  ESIEFLFAHNLVRAAKFELPLAWNFQLEKYARWWAGQRKGDCKLQHSFPEDDFKLGENIF 120
           ESIEFLFAHNLVRAAKFELPLAWNFQLEKYARWWAGQRKGDCKLQHSFPEDDFKLGENIF
Sbjct: 61  ESIEFLFAHNLVRAAKFELPLAWNFQLEKYARWWAGQRKGDCKLQHSFPEDDFKLGENIF 120

Query: 121 WGSGSAWRPVDAVTAWASEVKYYTYATNSCESGQMCGHYTQIVWRNTQRIGCARVVCDNG 180
           WGSGSAWRP+DAVT+WASEVKYYTYATNSCE+GQMCGHYTQIVWRNTQR+GCARVVCDNG
Sbjct: 121 WGSGSAWRPLDAVTSWASEVKYYTYATNSCEAGQMCGHYTQIVWRNTQRMGCARVVCDNG 180

Query: 181 DIFMTCNYDPPGNYVGERPY 201
           DIFMTCNYDPPGNY+GERPY
Sbjct: 181 DIFMTCNYDPPGNYLGERPY 200

[Close]
BLAST of Lsi06G011130 vs. NCBI nr
Match: gi|659107361|ref|XP_008453636.1| (PREDICTED: pathogenesis-related protein PR-1 [Cucumis melo])

HSP 1 Score: 400.2 bits (1027), Expect = 2.1e-108
Identity = 184/201 (91.54%), Postives = 191/201 (95.02%), Query Frame = 1 

Query: 1   MNKQLQLALFLFLAIVFTPQVLSHNISQT-PGVQVQINKQKQVDNETMYRMSKQLCWGCI 60
           MNKQLQL LFL L  VF P+VLSHN SQT PGVQVQ NKQ QVDNET+Y++SKQLCWGCI
Sbjct: 1   MNKQLQLPLFLVLLTVFMPRVLSHNFSQTTPGVQVQTNKQNQVDNETIYKVSKQLCWGCI 60

Query: 61  SESIEFLFAHNLVRAAKFELPLAWNFQLEKYARWWAGQRKGDCKLQHSFPEDDFKLGENI 120
           SESIEFLFAHNLVRAAKFELPLAWNFQLEKYARWWAGQRKGDCKLQHSFPE DFKLGENI
Sbjct: 61  SESIEFLFAHNLVRAAKFELPLAWNFQLEKYARWWAGQRKGDCKLQHSFPEGDFKLGENI 120

Query: 121 FWGSGSAWRPVDAVTAWASEVKYYTYATNSCESGQMCGHYTQIVWRNTQRIGCARVVCDN 180
           FWGSGSAWRP+DAVT+WASEVKYYTYATNSCE+GQMCGHYTQIVWRNTQRIGCARVVCDN
Sbjct: 121 FWGSGSAWRPLDAVTSWASEVKYYTYATNSCEAGQMCGHYTQIVWRNTQRIGCARVVCDN 180

Query: 181 GDIFMTCNYDPPGNYVGERPY 201
           GDIFMTCNYDPPGNYVGERPY
Sbjct: 181 GDIFMTCNYDPPGNYVGERPY 201

[Close]
BLAST of Lsi06G011130 vs. NCBI nr
Match: gi|388503388|gb|AFK39760.1| (unknown [Lotus japonicus])

HSP 1 Score: 317.4 bits (812), Expect = 1.8e-83
Identity = 139/194 (71.65%), Postives = 161/194 (82.99%), Query Frame = 1 

Query: 7   LALFLFLAIVFTPQVLSHNISQTPGVQVQINKQKQVDNETMYRMSKQLCWGCISESIEFL 66
           L LFLF  ++  PQ    + S  P    Q+  +K  DNET+Y++SKQLCWGCI ES+EFL
Sbjct: 5   LILFLFFLVLANPQ----SASSVPQTHNQLTPKKIPDNETIYKVSKQLCWGCIGESLEFL 64

Query: 67  FAHNLVRAAKFELPLAWNFQLEKYARWWAGQRKGDCKLQHSFPEDDFKLGENIFWGSGSA 126
           F HN+VRAAK+E PL W+FQL+ YARWWAGQRK DCK++HSFPE+DFKLGENIFWGSGSA
Sbjct: 65  FRHNMVRAAKWESPLMWDFQLQSYARWWAGQRKPDCKVEHSFPENDFKLGENIFWGSGSA 124

Query: 127 WRPVDAVTAWASEVKYYTYATNSCESGQMCGHYTQIVWRNTQRIGCARVVCDNGDIFMTC 186
           W P DAV AWA E KYYTYATN+CE GQMCGHYTQIVW+NT+R+GCARVVCD+GD+FMTC
Sbjct: 125 WTPTDAVKAWADEEKYYTYATNTCEEGQMCGHYTQIVWKNTKRVGCARVVCDDGDVFMTC 184

Query: 187 NYDPPGNYVGERPY 201
           NYDP GNYVGERPY
Sbjct: 185 NYDPVGNYVGERPY 194

[Close]
BLAST of Lsi06G011130 vs. NCBI nr
Match: gi|734408465|gb|KHN34793.1| (Pathogenesis-related protein PR-1 [Glycine soja])

HSP 1 Score: 317.0 bits (811), Expect = 2.4e-83
Identity = 143/196 (72.96%), Postives = 167/196 (85.20%), Query Frame = 1 

Query: 7   LALFLFLAIV-FTPQVLSHNISQTPGVQV-QINKQKQVDNETMYRMSKQLCWGCISESIE 66
           L LFL + +V FT  V + +I+      + Q+ +QK+ DNET+YR+SKQLCWGCI+ES+E
Sbjct: 5   LVLFLLMILVTFTSNVNTLSINPKSNSSIPQLTQQKRPDNETIYRVSKQLCWGCIAESLE 64

Query: 67  FLFAHNLVRAAKFELPLAWNFQLEKYARWWAGQRKGDCKLQHSFPEDDFKLGENIFWGSG 126
           FLF HNLVRAAK+ELPL W+FQLE+YARWWAGQRK DCKL+HSFPED FKLGENI+WGSG
Sbjct: 65  FLFRHNLVRAAKWELPLMWDFQLEQYARWWAGQRKADCKLEHSFPEDGFKLGENIYWGSG 124

Query: 127 SAWRPVDAVTAWASEVKYYTYATNSCESGQMCGHYTQIVWRNTQRIGCARVVCDNGDIFM 186
           SAW P DAV AWA E KYYTYATN+C  GQMCGHYTQIVW++T+RIGCARVVCD+GD+FM
Sbjct: 125 SAWTPSDAVRAWADEEKYYTYATNTCVPGQMCGHYTQIVWKSTRRIGCARVVCDDGDVFM 184

Query: 187 TCNYDPPGNYVGERPY 201
           TCNYDP GNYVGERPY
Sbjct: 185 TCNYDPVGNYVGERPY 200

[Close]
BLAST of Lsi06G011130 vs. NCBI nr
Match: gi|947070092|gb|KRH18983.1| (hypothetical protein GLYMA_13G094100 [Glycine max])

HSP 1 Score: 315.8 bits (808), Expect = 5.2e-83
Identity = 142/196 (72.45%), Postives = 167/196 (85.20%), Query Frame = 1 

Query: 7   LALFLFLAIV-FTPQVLSHNISQTPGVQV-QINKQKQVDNETMYRMSKQLCWGCISESIE 66
           L LFL + +V FT  V + +I+      + Q+ +QK+ DNET+YR+SKQLCWGCI+ES+E
Sbjct: 5   LVLFLLMILVTFTSNVNTLSINPKSNSSIPQLTQQKRPDNETIYRVSKQLCWGCIAESLE 64

Query: 67  FLFAHNLVRAAKFELPLAWNFQLEKYARWWAGQRKGDCKLQHSFPEDDFKLGENIFWGSG 126
           FLF HNLVRAAK+ELPL W+FQLE+YARWWAG+RK DCKL+HSFPED FKLGENI+WGSG
Sbjct: 65  FLFRHNLVRAAKWELPLMWDFQLEQYARWWAGERKADCKLEHSFPEDGFKLGENIYWGSG 124

Query: 127 SAWRPVDAVTAWASEVKYYTYATNSCESGQMCGHYTQIVWRNTQRIGCARVVCDNGDIFM 186
           SAW P DAV AWA E KYYTYATN+C  GQMCGHYTQIVW++T+RIGCARVVCD+GD+FM
Sbjct: 125 SAWTPSDAVRAWADEEKYYTYATNTCVPGQMCGHYTQIVWKSTRRIGCARVVCDDGDVFM 184

Query: 187 TCNYDPPGNYVGERPY 201
           TCNYDP GNYVGERPY
Sbjct: 185 TCNYDPVGNYVGERPY 200

The following BLAST results are available for this feature:
BLAST of Lsi06G011130 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PR1_MEDTR4.1e-4355.80Pathogenesis-related protein PR-1 OS=Medicago truncatula GN=PR-1 PE=2 SV=1[more]
PRMS_MAIZE1.1e-3752.52Pathogenesis-related protein PRMS OS=Zea mays GN=PRMS PE=2 SV=1[more]
PR13_HORVU2.8e-3650.36Pathogenesis-related protein PRB1-3 OS=Hordeum vulgare PE=2 SV=1[more]
PR12_HORVU6.3e-3648.92Pathogenesis-related protein PRB1-2 OS=Hordeum vulgare PE=2 SV=1[more]
PR1C_TOBAC8.2e-3648.18Pathogenesis-related protein 1C OS=Nicotiana tabacum PE=2 SV=3[more]
BLAST of Lsi06G011130 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LUG8_CUCSA1.0e-10991.50Uncharacterized protein OS=Cucumis sativus GN=Csa_1G420360 PE=3 SV=1[more]
I3SHL8_LOTJA1.3e-8371.65Uncharacterized protein OS=Lotus japonicus PE=2 SV=1[more]
A0A0B2RR83_GLYSO1.6e-8372.96Pathogenesis-related protein PR-1 OS=Glycine soja GN=glysoja_032969 PE=3 SV=1[more]
I1LVT9_SOYBN3.6e-8372.45Uncharacterized protein OS=Glycine max GN=GLYMA_13G094100 PE=3 SV=1[more]
A0A151SRL6_CAJCA8.1e-8370.00Uncharacterized protein OS=Cajanus cajan GN=KK1_003695 PE=3 SV=1[more]
BLAST of Lsi06G011130 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G25780.11.5e-6463.64 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-r... [more]
AT5G57625.11.3e-4456.93 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-r... [more]
AT4G30320.11.7e-4451.70 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-r... [more]
AT4G25790.13.9e-4456.52 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-r... [more]
AT1G01310.15.3e-4153.24 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-r... [more]
BLAST of Lsi06G011130 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449457125|ref|XP_004146299.1|1.5e-10991.50PREDICTED: pathogenesis-related protein PR-1 [Cucumis sativus][more]
gi|659107361|ref|XP_008453636.1|2.1e-10891.54PREDICTED: pathogenesis-related protein PR-1 [Cucumis melo][more]
gi|388503388|gb|AFK39760.1|1.8e-8371.65unknown [Lotus japonicus][more]
gi|734408465|gb|KHN34793.1|2.4e-8372.96Pathogenesis-related protein PR-1 [Glycine soja][more]
gi|947070092|gb|KRH18983.1|5.2e-8372.45hypothetical protein GLYMA_13G094100 [Glycine max][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005576extracellular region
Vocabulary: INTERPRO
TermDefinition
IPR018244Allrgn_V5/Tpx1_CS
IPR014044CAP_domain
IPR002413V5_allergen
IPR001283Allrgn_V5/Tpx1
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0006952 defense response
biological_process GO:0009607 response to biotic stimulus
biological_process GO:0048765 root hair cell differentiation
cellular_component GO:0005576 extracellular region
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi06G011130.1Lsi06G011130.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001283Cysteine-rich secretory protein, allergen V5/Tpx-1-relatedPRINTSPR00837V5TPXLIKEcoord: 132..145
score: 1.4E-17coord: 156..172
score: 1.4E-17coord: 183..196
score: 1.4E-17coord: 81..99
score: 1.4
IPR001283Cysteine-rich secretory protein, allergen V5/Tpx-1-relatedPANTHERPTHR10334CYSTEINE-RICH SECRETORY PROTEIN-RELATEDcoord: 60..200
score: 1.4
IPR002413Ves allergenPRINTSPR00838V5ALLERGENcoord: 155..174
score: 5.4E-9coord: 81..99
score: 5.4E-9coord: 130..145
score: 5.
IPR014044CAP domainGENE3DG3DSA:3.40.33.10coord: 62..200
score: 5.2
IPR014044CAP domainPFAMPF00188CAPcoord: 68..188
score: 1.4
IPR014044CAP domainSMARTSM00198SCP_3coord: 60..196
score: 1.6
IPR014044CAP domainunknownSSF55797PR-1-likecoord: 64..200
score: 6.8
IPR018244Allergen V5/Tpx-1-related, conserved sitePROSITEPS01009CRISP_1coord: 157..167
scor
IPR018244Allergen V5/Tpx-1-related, conserved sitePROSITEPS01010CRISP_2coord: 183..194
scor
NoneNo IPR availablePANTHERPTHR10334:SF229SUBFAMILY NOT NAMEDcoord: 60..200
score: 1.4

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Lsi06G011130Csa1G420360Cucumber (Chinese Long) v2culsiB063
Lsi06G011130CSPI01G19990Wild cucumber (PI 183967)cpilsiB065
Lsi06G011130Cucsa.092220Cucumber (Gy14) v1cgylsiB105
Lsi06G011130CmaCh10G004150Cucurbita maxima (Rimu)cmalsiB077
Lsi06G011130CmaCh11G004130Cucurbita maxima (Rimu)cmalsiB148
Lsi06G011130CmoCh11G004110Cucurbita moschata (Rifu)cmolsiB132
Lsi06G011130CmoCh10G004460Cucurbita moschata (Rifu)cmolsiB063
Lsi06G011130Cla018800Watermelon (97103) v1lsiwmB416
Lsi06G011130MELO3C017497Melon (DHL92) v3.5.1lsimeB400
Lsi06G011130ClCG06G013120Watermelon (Charleston Gray)lsiwcgB374
Lsi06G011130MELO3C017497.2Melon (DHL92) v3.6.1lsimedB422
Lsi06G011130Cla97C06G122430Watermelon (97103) v2lsiwmbB376
Lsi06G011130Bhi02G000612Wax gourdlsiwgoB523
Lsi06G011130Cp4.1LG04g12870Cucurbita pepo (Zucchini)cpelsiB558
Lsi06G011130Cp4.1LG18g06020Cucurbita pepo (Zucchini)cpelsiB303
Lsi06G011130CsGy1G019780Cucumber (Gy14) v2cgyblsiB061
Lsi06G011130CsaV3_1G031270Cucumber (Chinese Long) v3cuclsiB076
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi06G011130Bottle gourd (USVL1VR-Ls)lsilsiB061
Lsi06G011130Cucumber (Gy14) v1cgylsiB102
Lsi06G011130Wild cucumber (PI 183967)cpilsiB135
Lsi06G011130Cucumber (Chinese Long) v2culsiB135
Lsi06G011130Melon (DHL92) v3.5.1lsimeB417
Lsi06G011130Cucumber (Gy14) v2cgyblsiB124
Lsi06G011130Silver-seed gourdcarlsiB727
Lsi06G011130Cucumber (Chinese Long) v3cuclsiB146
Lsi06G011130Wax gourdlsiwgoB475