CsaV3_1G031270 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.AACACGAAGTACGGTTTTACTTGTCATGAAGCCTTTATTATCAAATTTGTTTTTATATCACTTACAATAAGTCGATTTCATAGACTAGAAGTGTAAGTTAACGAAAGAAGGATTAATATAAGTTTGAACAACATAAATTCTGCCACGTTGTATTCTAGAATGCACTGCAATGGCATCTTTATCCTCATGAAAAAACAAGAGAGAATCACGAGCACCACATAGCCTAATTCACGAGAAGGCATTACAACTACATTGCCCATAAATAATATAACATGTGTATGCTTGTGAGAGATTGTGAATCGCCATGCAAAAACCCGAAACCAAAACCACTCGATCTGTGGCCCCACTGGCTTCTCCAACATATCTCAACACTCATAGTGTATCTATATATGAAGAATCAAGCAACAATAATCACCAGCCATAGCCTCTGCATCAACAATAATAATCATAATGAATAAGCAGCTGCAACTACCTGTGTTTCTAGTCCTACTTACCGTCTTTATGCCCCGAGTTCTCTCTCACAACTTTTCTCAAACACCTGGTGTGCAAGTTCAAATATACAAGCAAAATCAAGTGGACAACGAAACCATCTACAGGGTATCGAAGCAACTGTGTTGGGGCTGCATTAGCGAGTCCATAGAGTTTCTATTTGCGCACAATCTGGTTCGAGCGGCCAAGTTTGAGCTGCCATTGGCATGGAATTTTCAGTTGGAGAAGTACGCAAGGTGGTGGGCAGGGCAGAGGAAAGGGGATTGTAAACTGCAACATTCTTTCCCTGAAGACGATTTCAAGCTGGGAGAGAACATATTTTGGGGGAGTGGATCGGCATGGAGGCCATTGGATGCGGTGACTTCGTGGGCTAGCGAAGTGAAGTATTACACATACGCCACCAATAGCTGCGAGGCTGGCCAAATGTGCGGCCATTACACACAGATTGTTTGGAGAAATACGCAAAGGATGGGTTGCGCTCGTGTCGTTTGTGACAATGGGGATATCTTCATGACTTGTAACTATGATCCGCCTGGTAACTATCTGGGTGAACGACCCTACTAAAGCTAATAACCATGTAACAATTACACCATCAAACTTTTACTTTTAAAAATTGAGTCTCAAATTTATTAAAATATTTAAAATTAAACTATTAAACTTTTGGATCCCTAAATAATTGTTTCGGGTCAAAGAGTAAAATTACAAAGTTTGAAGAATTTAAAGCATAAAATTGATATTTTTACACCAACTCTATGGATCAAATAAGGAATGATGCTCACACCTTCACTCTTCCAAACTCCTTGGTTCAAACCCTCCTAGATGGTGAAAATTGAACCCAAATGAATTTGAGAACTTAATTTTTATGATTGAAAGTTTAAGAATGTAATTATAACTATCATCCCATCATCCTACCTATAAGTGTTTTTTTTGCAATTTATCAAAAAGAGAAAAAAGATATTAATGAACTATACTCCAACAAATAATAATACTTGCCCACACATGAGTCAATAGAATATCCTACCGACTTTTCTGATGTATATTGTATTTTATTGATCTACATGCATTTAATAGATAAATAGACCCCACTAATTATTTTTCTGTGACACTAAAAGTTAATGCAGTCCATCAAGAAGTATGTAGGATATATATCTTATTGATTATGTGTAGTGACAAGTATTGCTCTTTGCTAGAAAACTCCTTAGTAAATATGATATTGTTATTGACTTGTATTATTGAAATATATAATTGTTTAATTAGTCAATGTAATTAAATAGACTAATAATATAAAATAAATTAGGTGGGAAAGTGTACAAACTGATCCTATCCAGCGATGTGTAGTCCTCTTGTGGAATATTGGAATACTGTAATATTGTTGTAGTATTACAATGTATGCTCCCATGGGTTATTCTCATCTCTATAAAATAGTTTAATTAAATTAAATGAGATATGATGGAATACTATAAAATCCAAGAAGGTAAAAACAAAAAATGACAGTTGCAAGAGTGGTATTAGATAAATCAACCAATCAATAATTGATACTCAGAAAAGGATGACTTAGTGAAACTAAGGTCCCTACATTGATCTTAATAATAATAAAAATAAATCATGGTGTAATTTATTTTTGAACATTGGTTTATTTAATATTTTAATAATTTGTTTTGAATGGAAGCAGTAAGGAGTGATGATGGGAAGAGATATAATGGTGATGGGGTATTATTGAGATAGGCCTGAACTGGGCTCAGTGTTGGACCCAATAAAAGCCCATCTGAAAAAGAATATGAATGGAATTGTGGAGCCCACAGTCAGAGCATAGGCCTAATTTTAGTTGGAAATTTAAATCAGCTGCGACAAATGCATGTTTCCACGTTCACCATTTCTTTTTTTATTACTCCTAATAGGA ATGAATAAGCAGCTGCAACTACCTGTGTTTCTAGTCCTACTTACCGTCTTTATGCCCCGAGTTCTCTCTCACAACTTTTCTCAAACACCTGGTGTGCAAGTTCAAATATACAAGCAAAATCAAGTGGACAACGAAACCATCTACAGGGTATCGAAGCAACTGTGTTGGGGCTGCATTAGCGAGTCCATAGAGTTTCTATTTGCGCACAATCTGGTTCGAGCGGCCAAGTTTGAGCTGCCATTGGCATGGAATTTTCAGTTGGAGAAGTACGCAAGGTGGTGGGCAGGGCAGAGGAAAGGGGATTGTAAACTGCAACATTCTTTCCCTGAAGACGATTTCAAGCTGGGAGAGAACATATTTTGGGGGAGTGGATCGGCATGGAGGCCATTGGATGCGGTGACTTCGTGGGCTAGCGAAGTGAAGTATTACACATACGCCACCAATAGCTGCGAGGCTGGCCAAATGTGCGGCCATTACACACAGATTGTTTGGAGAAATACGCAAAGGATGGGTTGCGCTCGTGTCGTTTGTGACAATGGGGATATCTTCATGACTTGTAACTATGATCCGCCTGGTAACTATCTGGGTGAACGACCCTACTAA ATGAATAAGCAGCTGCAACTACCTGTGTTTCTAGTCCTACTTACCGTCTTTATGCCCCGAGTTCTCTCTCACAACTTTTCTCAAACACCTGGTGTGCAAGTTCAAATATACAAGCAAAATCAAGTGGACAACGAAACCATCTACAGGGTATCGAAGCAACTGTGTTGGGGCTGCATTAGCGAGTCCATAGAGTTTCTATTTGCGCACAATCTGGTTCGAGCGGCCAAGTTTGAGCTGCCATTGGCATGGAATTTTCAGTTGGAGAAGTACGCAAGGTGGTGGGCAGGGCAGAGGAAAGGGGATTGTAAACTGCAACATTCTTTCCCTGAAGACGATTTCAAGCTGGGAGAGAACATATTTTGGGGGAGTGGATCGGCATGGAGGCCATTGGATGCGGTGACTTCGTGGGCTAGCGAAGTGAAGTATTACACATACGCCACCAATAGCTGCGAGGCTGGCCAAATGTGCGGCCATTACACACAGATTGTTTGGAGAAATACGCAAAGGATGGGTTGCGCTCGTGTCGTTTGTGACAATGGGGATATCTTCATGACTTGTAACTATGATCCGCCTGGTAACTATCTGGGTGAACGACCCTACTAA MNKQLQLPVFLVLLTVFMPRVLSHNFSQTPGVQVQIYKQNQVDNETIYRVSKQLCWGCISESIEFLFAHNLVRAAKFELPLAWNFQLEKYARWWAGQRKGDCKLQHSFPEDDFKLGENIFWGSGSAWRPLDAVTSWASEVKYYTYATNSCEAGQMCGHYTQIVWRNTQRMGCARVVCDNGDIFMTCNYDPPGNYLGERPY
BLAST of CsaV3_1G031270 vs. NCBI nr
Match: XP_004146299.1 (PREDICTED: pathogenesis-related protein PR-1 [Cucumis sativus] >KGN65423.1 hypothetical protein Csa_1G420360 [Cucumis sativus]) HSP 1 Score: 436.8 bits (1122), Expect = 4.0e-119 Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 0
BLAST of CsaV3_1G031270 vs. NCBI nr
Match: XP_008453636.1 (PREDICTED: pathogenesis-related protein PR-1 [Cucumis melo]) HSP 1 Score: 419.1 bits (1076), Expect = 8.6e-114 Identity = 193/201 (96.02%), Postives = 197/201 (98.01%), Query Frame = 0
BLAST of CsaV3_1G031270 vs. NCBI nr
Match: XP_022934022.1 (pathogenesis-related protein PR-1-like [Cucurbita moschata]) HSP 1 Score: 384.8 bits (987), Expect = 1.8e-103 Identity = 169/197 (85.79%), Postives = 184/197 (93.40%), Query Frame = 0
BLAST of CsaV3_1G031270 vs. NCBI nr
Match: XP_022971839.1 (pathogenesis-related protein PR-1-like [Cucurbita maxima]) HSP 1 Score: 382.1 bits (980), Expect = 1.2e-102 Identity = 169/197 (85.79%), Postives = 183/197 (92.89%), Query Frame = 0
BLAST of CsaV3_1G031270 vs. NCBI nr
Match: XP_023529291.1 (pathogenesis-related protein PR-1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 377.5 bits (968), Expect = 2.9e-101 Identity = 167/191 (87.43%), Postives = 181/191 (94.76%), Query Frame = 0
BLAST of CsaV3_1G031270 vs. TAIR10
Match: AT4G25780.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein) HSP 1 Score: 244.2 bits (622), Expect = 6.9e-65 Identity = 98/154 (63.64%), Postives = 127/154 (82.47%), Query Frame = 0
BLAST of CsaV3_1G031270 vs. TAIR10
Match: AT5G57625.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein) HSP 1 Score: 177.2 bits (448), Expect = 1.0e-44 Identity = 78/137 (56.93%), Postives = 97/137 (70.80%), Query Frame = 0
BLAST of CsaV3_1G031270 vs. TAIR10
Match: AT4G30320.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein) HSP 1 Score: 176.0 bits (445), Expect = 2.3e-44 Identity = 75/147 (51.02%), Postives = 99/147 (67.35%), Query Frame = 0
BLAST of CsaV3_1G031270 vs. TAIR10
Match: AT4G25790.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein) HSP 1 Score: 175.6 bits (444), Expect = 3.0e-44 Identity = 78/138 (56.52%), Postives = 94/138 (68.12%), Query Frame = 0
BLAST of CsaV3_1G031270 vs. TAIR10
Match: AT1G01310.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein) HSP 1 Score: 164.1 bits (414), Expect = 9.0e-41 Identity = 74/139 (53.24%), Postives = 89/139 (64.03%), Query Frame = 0
BLAST of CsaV3_1G031270 vs. Swiss-Prot
Match: sp|Q40374|PR1_MEDTR (Pathogenesis-related protein PR-1 OS=Medicago truncatula OX=3880 GN=PR-1 PE=2 SV=1) HSP 1 Score: 174.1 bits (440), Expect = 1.6e-42 Identity = 76/138 (55.07%), Postives = 95/138 (68.84%), Query Frame = 0
BLAST of CsaV3_1G031270 vs. Swiss-Prot
Match: sp|Q00008|PRMS_MAIZE (Pathogenesis-related protein PRMS OS=Zea mays OX=4577 GN=PRMS PE=2 SV=1) HSP 1 Score: 158.7 bits (400), Expect = 6.8e-38 Identity = 73/139 (52.52%), Postives = 95/139 (68.35%), Query Frame = 0
BLAST of CsaV3_1G031270 vs. Swiss-Prot
Match: sp|P35793|PR13_HORVU (Pathogenesis-related protein PRB1-3 OS=Hordeum vulgare OX=4513 PE=2 SV=1) HSP 1 Score: 154.5 bits (389), Expect = 1.3e-36 Identity = 70/139 (50.36%), Postives = 97/139 (69.78%), Query Frame = 0
BLAST of CsaV3_1G031270 vs. Swiss-Prot
Match: sp|Q05968|PR1_HORVU (Pathogenesis-related protein 1 OS=Hordeum vulgare OX=4513 PE=2 SV=1) HSP 1 Score: 153.7 bits (387), Expect = 2.2e-36 Identity = 69/139 (49.64%), Postives = 97/139 (69.78%), Query Frame = 0
BLAST of CsaV3_1G031270 vs. Swiss-Prot
Match: sp|P35792|PR12_HORVU (Pathogenesis-related protein PRB1-2 OS=Hordeum vulgare OX=4513 PE=2 SV=1) HSP 1 Score: 152.9 bits (385), Expect = 3.8e-36 Identity = 68/139 (48.92%), Postives = 97/139 (69.78%), Query Frame = 0
BLAST of CsaV3_1G031270 vs. TrEMBL
Match: tr|A0A0A0LUG8|A0A0A0LUG8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G420360 PE=3 SV=1) HSP 1 Score: 436.8 bits (1122), Expect = 2.6e-119 Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 0
BLAST of CsaV3_1G031270 vs. TrEMBL
Match: tr|A0A1S3BWU2|A0A1S3BWU2_CUCME (pathogenesis-related protein PR-1 OS=Cucumis melo OX=3656 GN=LOC103494291 PE=3 SV=1) HSP 1 Score: 419.1 bits (1076), Expect = 5.7e-114 Identity = 193/201 (96.02%), Postives = 197/201 (98.01%), Query Frame = 0
BLAST of CsaV3_1G031270 vs. TrEMBL
Match: tr|A0A1R3KFS7|A0A1R3KFS7_COCAP (Allergen V5/Tpx-1-related protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_01780 PE=3 SV=1) HSP 1 Score: 318.9 bits (816), Expect = 8.0e-84 Identity = 144/201 (71.64%), Postives = 163/201 (81.09%), Query Frame = 0
BLAST of CsaV3_1G031270 vs. TrEMBL
Match: tr|A0A1R3J4Q9|A0A1R3J4Q9_9ROSI (Allergen V5/Tpx-1-related protein OS=Corchorus olitorius OX=93759 GN=COLO4_19573 PE=3 SV=1) HSP 1 Score: 316.6 bits (810), Expect = 4.0e-83 Identity = 142/201 (70.65%), Postives = 163/201 (81.09%), Query Frame = 0
BLAST of CsaV3_1G031270 vs. TrEMBL
Match: tr|A0A061GPK4|A0A061GPK4_THECC (CAP OS=Theobroma cacao OX=3641 GN=TCM_038872 PE=3 SV=1) HSP 1 Score: 310.8 bits (795), Expect = 2.2e-81 Identity = 128/158 (81.01%), Postives = 146/158 (92.41%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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