Lsi06G007160 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi06G007160
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Protein phloem protein 2-like a1
Location	chr06 : 11754542 .. 11757304 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACAACAAATACTGGAGCTGGAAGACAGTGACAGTTAGCGGGTATAAACTTAAATCCATATTTTATTTCTTCATTAACACATCTCTTCTTTCCATCCATTGATTTGGTTTTTGATAATAAAAATTGATTAAGTAACTATTAAATTCAATGTGTATGAATATATCTTATTCGTATGATATTATCATGAGATTAAATAATATATATATATATATATATATATATATATATATATATATGCTCAATTTTTACTTTTTACGAGCTTAATCATTTTGATTTAGTTGTAAAAGAATTTTTTAAAAAATTGGGAATGGTTTAAAAATTAGTTTTTCACTAAAATAAGCGGAAAAAAAAGCAAATAATTTAGTTTGGACTTGTTTTGACGACTTTAGATTTTAAAAAATAATAATAAAAGTTGACCTAGTTTTTTAAAAAATTAAATTTTGTTTTCCTTCAATATAATAAGATTGGGACCATGATAATCATTACTCTTAGGGTTTTAGAGTCTGTTTGGATCACAGATATTGTTCCATCGTTATGGATATTAAGTGTCTGAGATTTAAATGTATGAGTTTTAAGTATCTGGAATAATTAATGTCTACGTTTGGGTATGCAGGATAATTAATATCTTGAAGTTTAAATATATGTATTTCATTTACTAATTTTGTATATAGAAACTAAAATTAAATAACTATTTAATTAGATTTAAGAGAAAAAGTAAGTAGTCATTAATTAAATTTAACCTTATTTAATATAGGGGAAATTTTAAAAATAGAAAAATAAGGAAAACTACTTACACAAAATAGCAAAATTTTTAAATAGTTTTGATAGACGCGGATAGAAGTCTATCGGGATCTATCAGTGATAGAAATGATAGAAGTCTATCACTGATAGATGCTGATAGAAGTCTATCAATGCCTATCTGTAATTTTTTTGCTATTTTAGGTAAATAGTTTGACATTTTTTTTATTTGTGAAAATTTCCCTTTAATATATGGTTATATTAACTAATAGTTTAATCACTTAAAATATCAATACATGAATATTTTTTTAGTTAAACATTAATTTAATTACTAAAACTAATTATATAAAAATAAGTTAATTATAATATTAATAAGGAAAATTTTCACAAATAGAAAAAATGTCAAATTATTTATAGAAAATAGCAAAAAAAAAAAAAAATATTAATAGACATTGATAGACTTCTATCAACATCTATAGTGATAGACTTCTATTATTTCTATCATTGATAGACCCTGATAGACTTCTATCAACATCTATCACAATTATTTAAAAATTTTGTTAGCTTGTGTAAATAGTTTCTCTTATTTTTCTATTTTTAAAAATTCCCCTATTGATAATTAATAATGAAAATTTATTTTATATAGTTAACATAACATAAAATATCAATGGTAAGTGTATTAGTTTAAATTGATTAAGTCTAAATATTCATTTATATTTAATAATTAATTAAAATAAATAGTAATGATTAATTAATATTAATTTATGAATTAATCAAGCTATATTTTTATTATTCATATCCCAAGTATAAAAATCTCACTAGTATGGAGGGTATTAGAAAACTCATATTAGATGGATTTTAAAGTTTACTAAATAATAATATCTTGAGTTTTAAAAAGTGAAATTTCATGAAACAAACAAAAATATTAAATGTCTACCTGAAATCTCATGAGAAATCTCGTGAAACAAACATACCCTTAGGGAGCATTTGGATTGAGAGAATTGGGATGGAAATAAGAGTAGGAATGGATAAGGCCAAACCGCCCTTTAATAACCAGAAAGATGGTTCTTAAGAGCGAAGAGCATCTTCAAAAAGCCACGGTGAAAACCAAGTATAAAATAATGTTTAATTTAATGAAAACTTAAGTTAATCTAAGCATACCTCAATTCGTTAATGAATATATGGTTAATAAAAAAGTTATAGAATAAAAAATTCTCCCCCCCCATTTGACTAATAAATAAAAGCTATGTTGATTCAAATTAATCGATATAGATTCTAAAGATTTATGTAAGTTAATATTGAAAAAGATTCTACACATTGTCAGCCAAAAAAAACCATATAACAAATGTAGAGATCAAGTGAAAAAAAAAATCCAAACCAAAATGAGGGAAAAAAAAAAAAGATAATTACATTAAGTAACATTTTTAGGACTAATAATTAAGGATAGAGCAACATTTATAGCAAAATCTGTCGGTGATAATAGTCTATCACTGAAAGATTTCGAGAACTAGATCTAAATTTTACAATATCTACAATATTTTTACATTGTGCTATATTTCTTAATATTTTGGATTTAATTGTTATAATTGCAATGGTCTAAAAAAAAATGGTATAGTTAATTTCTTGATCTCTCTCACCAATATGTGTAAAAACTTGCAGTTACGTAGTGGAAGAAGCCCACCTTAATGTGGCATCTTATGTGGATATTGTGGGGAAAAAAACTGCATCTTCTCTGAAACTAAATGTTTTGTACAAAGCAACATTTGTGGTAAAGTTGAAACCCAATGCTACTGGATGGAATGCTCCTGTGAAATTGGAAATAGTGTTGCCAAATGGAAGCAAGCAAGAGTCTCAAGAAATACTGCAAGATAAGCCAAGAGGCGAGTGGCTAAGGATCCTGGCGGGTAATTTCATTCTAAATACCCCTGGGCTACGTGGAGATATCCAATTCAAAATCTATCAACATGGAGAGAATTTGAAGACGGGGTTGATCGTTACGGGTCTTGTGATTGAAGAAGCATAA

mRNA sequence

ATGACAACAAATACTGGAGCTGGAAGACATTACGTAGTGGAAGAAGCCCACCTTAATGTGGCATCTTATGTGGATATTGTGGGGAAAAAAACTGCATCTTCTCTGAAACTAAATGTTTTGTACAAAGCAACATTTGTGGTAAAGTTGAAACCCAATGCTACTGGATGGAATGCTCCTGTGAAATTGGAAATAGTGTTGCCAAATGGAAGCAAGCAAGAGTCTCAAGAAATACTGCAAGATAAGCCAAGAGGCGAGTGGCTAAGGATCCTGGCGGGTAATTTCATTCTAAATACCCCTGGGCTACGTGGAGATATCCAATTCAAAATCTATCAACATGGAGAGAATTTGAAGACGGGGTTGATCGTTACGGGTCTTGTGATTGAAGAAGCATAA

Coding sequence (CDS)

ATGACAACAAATACTGGAGCTGGAAGACATTACGTAGTGGAAGAAGCCCACCTTAATGTGGCATCTTATGTGGATATTGTGGGGAAAAAAACTGCATCTTCTCTGAAACTAAATGTTTTGTACAAAGCAACATTTGTGGTAAAGTTGAAACCCAATGCTACTGGATGGAATGCTCCTGTGAAATTGGAAATAGTGTTGCCAAATGGAAGCAAGCAAGAGTCTCAAGAAATACTGCAAGATAAGCCAAGAGGCGAGTGGCTAAGGATCCTGGCGGGTAATTTCATTCTAAATACCCCTGGGCTACGTGGAGATATCCAATTCAAAATCTATCAACATGGAGAGAATTTGAAGACGGGGTTGATCGTTACGGGTCTTGTGATTGAAGAAGCATAA

Protein sequence

MTTNTGAGRHYVVEEAHLNVASYVDIVGKKTASSLKLNVLYKATFVVKLKPNATGWNAPVKLEIVLPNGSKQESQEILQDKPRGEWLRILAGNFILNTPGLRGDIQFKIYQHGENLKTGLIVTGLVIEEA

Homology

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BLAST of Lsi06G007160 vs. Swiss-Prot
Match: LEC_LUFAC (Lectin OS=Luffa acutangula PE=1 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 1.3e-18
Identity = 51/116 (43.97%), Postives = 72/116 (62.07%), Query Frame = 1


Query: 13  VEEAHLNVASYVDIVGKKTASSLKLNVLYKATFVVKLKPNATGWNAPVKLEIVLPNGSKQ 72
           +E A L    +++IVG    S L   + Y+A F V L  +A+GW  PV +++ +P+GS+Q
Sbjct: 92  LEVAELIDVCWLNIVGNIETSVLSPGISYEAAFEVMLTNSASGWRIPVDVKLKMPDGSEQ 151

Query: 73  ESQEILQDKPRGEWLRILAGNFILNTPGLRGDIQFKIYQHGENLKTGLIVTGLVIE 129
           ESQ  LQDKPRG W  I  G+F ++     G+I+F I QH E  K GL+V GLVI+
Sbjct: 152 ESQVNLQDKPRGVWFFISVGHFKISVGETIGNIEFSIVQHQE-AKRGLLVKGLVIQ 206

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BLAST of Lsi06G007160 vs. Swiss-Prot
Match: P2A02_ARATH (Protein PHLOEM PROTEIN 2-LIKE A2 OS=Arabidopsis thaliana GN=PP2A2 PE=2 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 9.8e-14
Identity = 41/115 (35.65%), Postives = 66/115 (57.39%), Query Frame = 1


Query: 14  EEAHLNVASYVDIVGKKTASSLKLNVLYKATFVVKLKPNATGWNAPVKLEIVLPNGSKQE 73
           E A +   +++++VGK     L  N LY+  FVVKL  +A GW+  V  ++VLP G  +E
Sbjct: 76  EVAKMERVAWLEVVGKFETEKLTPNSLYEVVFVVKLIDSAKGWDFRVNFKLVLPTGETKE 135

Query: 74  SQEILQDKPRGEWLRILAGNFILNTPGLRGDIQFKIYQ-HGENLKTGLIVTGLVI 128
            +E +    R +W+ I AG F+++   L G I+F + +   +  K+GLIV G+ I
Sbjct: 136 RRENVNLLERNKWVEIPAGEFMISPEHLSGKIEFSMLEVKSDQWKSGLIVKGVAI 190

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BLAST of Lsi06G007160 vs. Swiss-Prot
Match: P2A01_ARATH (Protein PHLOEM PROTEIN 2-LIKE A1 OS=Arabidopsis thaliana GN=PP2A1 PE=2 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 2.2e-13
Identity = 42/118 (35.59%), Postives = 66/118 (55.93%), Query Frame = 1


Query: 13  VEEAHLNVASYVDIVGKKTASSLKLNVLYKATFVVKLKPNATGWNAPVKLEIVLPNGSK- 72
           VE   L    ++DI GK    +L   ++Y+  F VKL+  A GW+ PV L++VLPNG + 
Sbjct: 126 VEAVGLKNVCWLDITGKFDTRNLTPGIVYEVVFKVKLEDPAYGWDTPVNLKLVLPNGKEK 185

Query: 73  -QESQEILQDKPRGEWLRILAGNFILNTPGLRGDIQFKIYQHGENL-KTGLIVTGLVI 128
            QE +  L++ PR +W+ +  G F+       G+I F +Y+H   + K GL + G+ I
Sbjct: 186 PQEKKVSLRELPRYKWVDVRVGEFV-PEKSAAGEITFSMYEHAAGVWKKGLSLKGVAI 242

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BLAST of Lsi06G007160 vs. Swiss-Prot
Match: P2A04_ARATH (Uncharacterized protein PHLOEM PROTEIN 2-LIKE A4 OS=Arabidopsis thaliana GN=PP2A4 PE=4 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 9.1e-12
Identity = 37/102 (36.27%), Postives = 57/102 (55.88%), Query Frame = 1


Query: 12  VVEEAHLNVASYVDIVGKKTASSLKLNVLYKATFVVKLKPNATGWNAPVKLEIVLPNGSK 71
           +V+ A L    ++D+ GK     L L   Y+  +VVKL+  A+GWN PV L++ LP+G K
Sbjct: 44  LVDAAVLEAVCWLDVNGKFDTRELTLETTYEVVYVVKLEDTASGWNIPVNLKLTLPDGKK 103

Query: 72  --QESQEILQDKPRGEWLRILAGNFILNTPGLRGDIQFKIYQ 112
             QE    L++     W+ I AG F+  +P   G+I F +Y+
Sbjct: 104 RPQERSMCLKEHIGKRWIDISAGEFV-TSPDNAGEISFSMYE 144

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BLAST of Lsi06G007160 vs. Swiss-Prot
Match: P2A06_ARATH (Protein PHLOEM PROTEIN 2-LIKE A6 OS=Arabidopsis thaliana GN=PP2A6 PE=2 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 4.5e-11
Identity = 45/120 (37.50%), Postives = 65/120 (54.17%), Query Frame = 1


Query: 13  VEEAHLNVASYVDIVGKKTASSLKLNVLYKATFVVKLKPNATGWNAPV--KLEIVLPNG- 72
           +E A LN   ++ IVG  T  +L     Y+A FVVKL+ NA+GW  PV  KL++V  +G 
Sbjct: 269 IEIATLNKVYWLKIVGTITTENLTPGAKYEAVFVVKLENNASGWEQPVNLKLKVVQHDGD 328

Query: 73  -SKQESQEILQDKPRGEWLRILAGNFILNTPGLRGDIQFKIYQHGENL-KTGLIVTGLVI 128
             + +  E L D     W+ ILAG F++        I F +YQ+ +   K GL+V G+ I
Sbjct: 329 DDRVDRTENLNDYIGQNWVDILAGVFVVPPKTTPATIIFTMYQYEDKYKKKGLVVKGVAI 388

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BLAST of Lsi06G007160 vs. TrEMBL
Match: A0A067L678_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02619 PE=4 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 3.0e-17
Identity = 46/115 (40.00%), Postives = 70/115 (60.87%), Query Frame = 1


Query: 13  VEEAHLNVASYVDIVGKKTASSLKLNVLYKATFVVKLKPNATGWNAPVKLEIVLPNGSKQ 72
           VE A L+   ++D+ GK + S L   ++Y+  + VKL   A GW  P+ L++ LPNG  +
Sbjct: 63  VEVAKLSHVCWLDVRGKFSVSDLSPGIVYEIVYQVKLTNGADGWELPISLKLSLPNGVVR 122

Query: 73  ESQEILQDKPRGEWLRILAGNFILNTPGLRGDIQFKIYQHGENLKTGLIVTGLVI 128
           + Q +L +KPRGEW  +  GNF L   G  G++ F IY+HG + K GLI+ G ++
Sbjct: 123 QRQVVLLEKPRGEWTELSVGNF-LAEEGETGEVCFDIYEHGGHWKRGLIIRGAIL 176

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BLAST of Lsi06G007160 vs. TrEMBL
Match: A0A0A0KYP0_CUCSA (Phloem lectin OS=Cucumis sativus GN=Csa_4G501830 PE=4 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 1.1e-16
Identity = 50/118 (42.37%), Postives = 65/118 (55.08%), Query Frame = 1


Query: 11  YVVEEAHLNVASYVDIVGKKTASSLKLNVLYKATFVVKLKPNATGWNAPVKLEIVLPNGS 70
           Y +EEA L   S++D      AS  K ++ Y A+  V L  NA+GWN P+ LEI LP+GS
Sbjct: 36  YAIEEARLLQVSWLDCRWSMDASDFKQDIWYNASVEVMLTSNASGWNVPLHLEIELPDGS 95

Query: 71  KQESQEILQDKPRGEWLRILAGNFILNTPGLRGDIQFKIYQHGENLKTGLIVTGLVIE 129
           KQESQ +L  +    W +I  G FIL      G I+F  Y H  N K GL +  L I+
Sbjct: 96  KQESQIVLAGRQPNVWFKIPIGKFILGGSLTSGTIRFGFYNHEGNWKRGLNIRALAIQ 153

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BLAST of Lsi06G007160 vs. TrEMBL
Match: A0A0K9QP86_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_163150 PE=4 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 1.5e-16
Identity = 46/125 (36.80%), Postives = 75/125 (60.00%), Query Frame = 1


Query: 5   TGAGRHYVVEEAHLNVASYVDIVGKKTASSLKLNVLYKATFVVKLKPNATGWNAPVKLEI 64
           T    H  +  A L   +++++ G+   + L   V Y+  F++ L+  + GW+ PV   +
Sbjct: 23  TQTSDHGNITIAQLRNVAWLEVHGRLHTTHLTPGVTYQVAFLIMLEYASYGWDVPVNFRL 82

Query: 65  VLPNGSKQESQEILQDKPRGEWLRILAGNFILNTPGLRGDIQFKIYQH-GENLKTGLIVT 124
            LPNG+KQE +E   +KP+GEWLRI AG F +++P   G+I+F +Y++ G + K GLIV 
Sbjct: 83  TLPNGNKQEHKENFNEKPKGEWLRIPAGEFKVSSPENVGEIEFSLYEYDGGSWKKGLIVK 142

Query: 125 GLVIE 129
             +IE
Sbjct: 143 SAIIE 147

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BLAST of Lsi06G007160 vs. TrEMBL
Match: Q8LK69_CUCSA (17 kDa phloem lectin OS=Cucumis sativus GN=Lec17-7 PE=4 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 1.9e-16
Identity = 50/118 (42.37%), Postives = 65/118 (55.08%), Query Frame = 1


Query: 11  YVVEEAHLNVASYVDIVGKKTASSLKLNVLYKATFVVKLKPNATGWNAPVKLEIVLPNGS 70
           Y +EEA L   S++D      AS  K ++ Y A+  V L  NA+GWN P+ LEI LP+GS
Sbjct: 36  YAIEEARLLQVSWLDCRWSMDASDFKQDIWYNASVEVMLTSNASGWNVPLHLEIELPDGS 95

Query: 71  KQESQEILQDKPRGEWLRILAGNFILNTPGLRGDIQFKIYQHGENLKTGLIVTGLVIE 129
           KQESQ +L  +    W +I  G FIL      G I+F  Y H  N K GL +  L I+
Sbjct: 96  KQESQIVLAGRQPNVWFKIPIGKFILRGSLTSGTIRFGFYNHEGNWKRGLNIRTLAIQ 153

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BLAST of Lsi06G007160 vs. TrEMBL
Match: A0A0D2T373_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G193600 PE=4 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 2.5e-16
Identity = 47/117 (40.17%), Postives = 67/117 (57.26%), Query Frame = 1


Query: 13  VEEAHLNVASYVDIVGKKTASSLKLNVLYKATFVVKLKPNATGWNAPVKLEIVLPNGSKQ 72
           +E A L+   ++D+ GK   S L    LY+  + VKL   A+GW  PVKL + LPNG  Q
Sbjct: 45  IEVAKLSHVCWLDVRGKLKISELSPATLYEVVYEVKLTKGASGWELPVKLRLSLPNGIVQ 104

Query: 73  ESQEILQDKPRGEWLRILAGNFIL--NTPGLRGDIQFKIYQHGENLKTGLIVTGLVI 128
           E Q  L  KPRG+W+ +  G+F    N     G++ F  YQHG + K+GL+V G ++
Sbjct: 105 ERQVSLLQKPRGQWMELNVGSFHTPDNEDDETGEVCFDFYQHGGHWKSGLVVKGAIL 161

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BLAST of Lsi06G007160 vs. TAIR10
Match: AT4G19840.1 (AT4G19840.1 phloem protein 2-A1)

HSP 1 Score: 76.6 bits (187), Expect = 1.2e-14
Identity = 42/118 (35.59%), Postives = 66/118 (55.93%), Query Frame = 1


Query: 13  VEEAHLNVASYVDIVGKKTASSLKLNVLYKATFVVKLKPNATGWNAPVKLEIVLPNGSK- 72
           VE   L    ++DI GK    +L   ++Y+  F VKL+  A GW+ PV L++VLPNG + 
Sbjct: 126 VEAVGLKNVCWLDITGKFDTRNLTPGIVYEVVFKVKLEDPAYGWDTPVNLKLVLPNGKEK 185

Query: 73  -QESQEILQDKPRGEWLRILAGNFILNTPGLRGDIQFKIYQHGENL-KTGLIVTGLVI 128
            QE +  L++ PR +W+ +  G F+       G+I F +Y+H   + K GL + G+ I
Sbjct: 186 PQEKKVSLRELPRYKWVDVRVGEFV-PEKSAAGEITFSMYEHAAGVWKKGLSLKGVAI 242

[Close]

BLAST of Lsi06G007160 vs. TAIR10
Match: AT1G33920.1 (AT1G33920.1 phloem protein 2-A4)

HSP 1 Score: 71.2 bits (173), Expect = 5.2e-13
Identity = 37/102 (36.27%), Postives = 57/102 (55.88%), Query Frame = 1


Query: 12  VVEEAHLNVASYVDIVGKKTASSLKLNVLYKATFVVKLKPNATGWNAPVKLEIVLPNGSK 71
           +V+ A L    ++D+ GK     L L   Y+  +VVKL+  A+GWN PV L++ LP+G K
Sbjct: 44  LVDAAVLEAVCWLDVNGKFDTRELTLETTYEVVYVVKLEDTASGWNIPVNLKLTLPDGKK 103

Query: 72  --QESQEILQDKPRGEWLRILAGNFILNTPGLRGDIQFKIYQ 112
             QE    L++     W+ I AG F+  +P   G+I F +Y+
Sbjct: 104 RPQERSMCLKEHIGKRWIDISAGEFV-TSPDNAGEISFSMYE 144

[Close]

BLAST of Lsi06G007160 vs. TAIR10
Match: AT4G19850.2 (AT4G19850.2 lectin-related)

HSP 1 Score: 70.9 bits (172), Expect = 6.7e-13
Identity = 39/120 (32.50%), Postives = 63/120 (52.50%), Query Frame = 1


Query: 14  EEAHLNVASYVDIVGKKTASSLKLNVLYKATFVVKLKPNATGWNAPVKLEIVLPNGSKQE 73
           E A +   +++++VGK     L  N LY+  FVVKL  +A GW+  V  ++VLP G  +E
Sbjct: 101 EVAKMERVAWLEVVGKFETEKLTPNSLYEVVFVVKLIDSAKGWDFRVNFKLVLPTGETKE 160

Query: 74  SQEILQDKPRGEWLRILAGNFILNTPGLRGDIQF---KIYQHGENLKTGLIVTGLVIEEA 131
            +E +    R +W+ I AG F+++   L G I+    K+     N  T  I+  + + EA
Sbjct: 161 RRENVNLLERNKWVEIPAGEFMISPEHLSGKIEIRKSKLVSLNNNKNTKFIMMMIYVHEA 220

[Close]

BLAST of Lsi06G007160 vs. TAIR10
Match: AT5G45080.1 (AT5G45080.1 phloem protein 2-A6)

HSP 1 Score: 68.9 bits (167), Expect = 2.6e-12
Identity = 45/120 (37.50%), Postives = 65/120 (54.17%), Query Frame = 1


Query: 13  VEEAHLNVASYVDIVGKKTASSLKLNVLYKATFVVKLKPNATGWNAPV--KLEIVLPNG- 72
           +E A LN   ++ IVG  T  +L     Y+A FVVKL+ NA+GW  PV  KL++V  +G 
Sbjct: 269 IEIATLNKVYWLKIVGTITTENLTPGAKYEAVFVVKLENNASGWEQPVNLKLKVVQHDGD 328

Query: 73  -SKQESQEILQDKPRGEWLRILAGNFILNTPGLRGDIQFKIYQHGENL-KTGLIVTGLVI 128
             + +  E L D     W+ ILAG F++        I F +YQ+ +   K GL+V G+ I
Sbjct: 329 DDRVDRTENLNDYIGQNWVDILAGVFVVPPKTTPATIIFTMYQYEDKYKKKGLVVKGVAI 388

[Close]

BLAST of Lsi06G007160 vs. TAIR10
Match: AT1G65390.1 (AT1G65390.1 phloem protein 2 A5)

HSP 1 Score: 59.3 bits (142), Expect = 2.0e-09
Identity = 43/119 (36.13%), Postives = 60/119 (50.42%), Query Frame = 1


Query: 12  VVEEAHLNVASYVDIVGKKTASSLKLNVLYKATFVVKLKPNATGWNAPVKLEIVLPN--G 71
           V+E A L  AS++D+ GK     L     Y+  FVVKL+     W   VKL++ LPN   
Sbjct: 291 VMEIAFLKSASWLDVAGKFDTRYLTPRTRYEVVFVVKLE-YTFEWETLVKLKLDLPNTWE 350

Query: 72  SKQESQEILQDKPRGEWLRILAGNFILNTPGLRGDIQFKIYQHGENL-KTGLIVTGLVI 128
             QE    + D    +WL I  G F  +   + G+I F +Y+H   L K+GL V G+ I
Sbjct: 351 KPQEQSVDMFDYISDQWLDIPVGEFTTSKKNV-GEISFAMYEHECQLWKSGLFVKGVTI 407

[Close]

BLAST of Lsi06G007160 vs. NCBI nr
Match: gi|802585221|ref|XP_012070309.1| (PREDICTED: protein PHLOEM PROTEIN 2-LIKE A1-like [Jatropha curcas])

HSP 1 Score: 96.3 bits (238), Expect = 4.2e-17
Identity = 46/115 (40.00%), Postives = 70/115 (60.87%), Query Frame = 1


Query: 13  VEEAHLNVASYVDIVGKKTASSLKLNVLYKATFVVKLKPNATGWNAPVKLEIVLPNGSKQ 72
           VE A L+   ++D+ GK + S L   ++Y+  + VKL   A GW  P+ L++ LPNG  +
Sbjct: 63  VEVAKLSHVCWLDVRGKFSVSDLSPGIVYEIVYQVKLTNGADGWELPISLKLSLPNGVVR 122

Query: 73  ESQEILQDKPRGEWLRILAGNFILNTPGLRGDIQFKIYQHGENLKTGLIVTGLVI 128
           + Q +L +KPRGEW  +  GNF L   G  G++ F IY+HG + K GLI+ G ++
Sbjct: 123 QRQVVLLEKPRGEWTELSVGNF-LAEEGETGEVCFDIYEHGGHWKRGLIIRGAIL 176

[Close]

BLAST of Lsi06G007160 vs. NCBI nr
Match: gi|702355413|ref|XP_010058634.1| (PREDICTED: protein PHLOEM PROTEIN 2-LIKE A1-like [Eucalyptus grandis])

HSP 1 Score: 95.1 bits (235), Expect = 9.4e-17
Identity = 42/115 (36.52%), Postives = 72/115 (62.61%), Query Frame = 1


Query: 13  VEEAHLNVASYVDIVGKKTASSLKLNVLYKATFVVKLKPNATGWNAPVKLEIVLPNGSKQ 72
           VE A L    ++D+ G+   S L L  +Y+  FV+ ++P+  GW  PV + + LP+G+KQ
Sbjct: 38  VEMAELLNVCWLDVHGRFYVSKLSLGTIYEVAFVILMRPSGDGWQIPVNIRLTLPDGTKQ 97

Query: 73  ESQEILQDKPRGEWLRILAGNFILNTPGLRGDIQFKIYQHGENLKTGLIVTGLVI 128
           E +E L +KPRG+W+ I AG  +  +    G+++  +++HG + K GL+V G++I
Sbjct: 98  EHKENLMEKPRGDWIEIKAGE-LSTSKHKEGEMEVSMFEHGGHWKRGLVVKGVLI 151

[Close]

BLAST of Lsi06G007160 vs. NCBI nr
Match: gi|659121464|ref|XP_008460673.1| (PREDICTED: uncharacterized protein PHLOEM PROTEIN 2-LIKE A4-like [Cucumis melo])

HSP 1 Score: 94.4 bits (233), Expect = 1.6e-16
Identity = 49/118 (41.53%), Postives = 70/118 (59.32%), Query Frame = 1


Query: 11  YVVEEAHLNVASYVDIVGKKTASSLKLNVLYKATFVVKLKPNATGWNAPVKLEIVLPNGS 70
           Y +EEA L   S++D      +SS K +V Y A+  V +   A+GWN P+ +EI +P+GS
Sbjct: 36  YPIEEARLLQVSWLDCRWTMDSSSFKQDVWYNASVDVMMTNTASGWNIPLNIEIDMPDGS 95

Query: 71  KQESQEILQDKPRGEWLRILAGNFILNTPGLRGDIQFKIYQHGENLKTGLIVTGLVIE 129
           KQESQ +L  K    W +I  G FI+++    G I+F  Y HG + K GLIV  L+I+
Sbjct: 96  KQESQIVLAGKQPNVWFKIPLGKFIISSSVTSGIIRFGFYNHGGHWKRGLIVRALLIQ 153

[Close]

BLAST of Lsi06G007160 vs. NCBI nr
Match: gi|778694948|ref|XP_011653899.1| (PREDICTED: protein PHLOEM PROTEIN 2-LIKE A1 [Cucumis sativus])

HSP 1 Score: 94.4 bits (233), Expect = 1.6e-16
Identity = 50/118 (42.37%), Postives = 65/118 (55.08%), Query Frame = 1


Query: 11  YVVEEAHLNVASYVDIVGKKTASSLKLNVLYKATFVVKLKPNATGWNAPVKLEIVLPNGS 70
           Y +EEA L   S++D      AS  K ++ Y A+  V L  NA+GWN P+ LEI LP+GS
Sbjct: 36  YAIEEARLLQVSWLDCRWSMDASDFKQDIWYNASVEVMLTSNASGWNVPLHLEIELPDGS 95

Query: 71  KQESQEILQDKPRGEWLRILAGNFILNTPGLRGDIQFKIYQHGENLKTGLIVTGLVIE 129
           KQESQ +L  +    W +I  G FIL      G I+F  Y H  N K GL +  L I+
Sbjct: 96  KQESQIVLAGRQPNVWFKIPIGKFILGGSLTSGTIRFGFYNHEGNWKRGLNIRALAIQ 153

[Close]

BLAST of Lsi06G007160 vs. NCBI nr
Match: gi|902174101|gb|KNA08366.1| (hypothetical protein SOVF_163150 [Spinacia oleracea])

HSP 1 Score: 94.0 bits (232), Expect = 2.1e-16
Identity = 46/125 (36.80%), Postives = 75/125 (60.00%), Query Frame = 1


Query: 5   TGAGRHYVVEEAHLNVASYVDIVGKKTASSLKLNVLYKATFVVKLKPNATGWNAPVKLEI 64
           T    H  +  A L   +++++ G+   + L   V Y+  F++ L+  + GW+ PV   +
Sbjct: 23  TQTSDHGNITIAQLRNVAWLEVHGRLHTTHLTPGVTYQVAFLIMLEYASYGWDVPVNFRL 82

Query: 65  VLPNGSKQESQEILQDKPRGEWLRILAGNFILNTPGLRGDIQFKIYQH-GENLKTGLIVT 124
            LPNG+KQE +E   +KP+GEWLRI AG F +++P   G+I+F +Y++ G + K GLIV 
Sbjct: 83  TLPNGNKQEHKENFNEKPKGEWLRIPAGEFKVSSPENVGEIEFSLYEYDGGSWKKGLIVK 142

Query: 125 GLVIE 129
             +IE
Sbjct: 143 SAIIE 147

The following BLAST results are available for this feature:

BLAST of Lsi06G007160 vs. Swiss-Prot


Match Name	E-value	Identity	Description
LEC_LUFAC	1.3e-18	43.97	Lectin OS=Luffa acutangula PE=1 SV=1	[more]
P2A02_ARATH	9.8e-14	35.65	Protein PHLOEM PROTEIN 2-LIKE A2 OS=Arabidopsis thaliana GN=PP2A2 PE=2 SV=1	[more]
P2A01_ARATH	2.2e-13	35.59	Protein PHLOEM PROTEIN 2-LIKE A1 OS=Arabidopsis thaliana GN=PP2A1 PE=2 SV=1	[more]
P2A04_ARATH	9.1e-12	36.27	Uncharacterized protein PHLOEM PROTEIN 2-LIKE A4 OS=Arabidopsis thaliana GN=PP2A...	[more]
P2A06_ARATH	4.5e-11	37.50	Protein PHLOEM PROTEIN 2-LIKE A6 OS=Arabidopsis thaliana GN=PP2A6 PE=2 SV=1	[more]

BLAST of Lsi06G007160 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A067L678_JATCU	3.0e-17	40.00	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02619 PE=4 SV=1	[more]
A0A0A0KYP0_CUCSA	1.1e-16	42.37	Phloem lectin OS=Cucumis sativus GN=Csa_4G501830 PE=4 SV=1	[more]
A0A0K9QP86_SPIOL	1.5e-16	36.80	Uncharacterized protein OS=Spinacia oleracea GN=SOVF_163150 PE=4 SV=1	[more]
Q8LK69_CUCSA	1.9e-16	42.37	17 kDa phloem lectin OS=Cucumis sativus GN=Lec17-7 PE=4 SV=1	[more]
A0A0D2T373_GOSRA	2.5e-16	40.17	Uncharacterized protein OS=Gossypium raimondii GN=B456_008G193600 PE=4 SV=1	[more]

BLAST of Lsi06G007160 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G19840.1	1.2e-14	35.59	phloem protein 2-A1	[more]
AT1G33920.1	5.2e-13	36.27	phloem protein 2-A4	[more]
AT4G19850.2	6.7e-13	32.50	lectin-related	[more]
AT5G45080.1	2.6e-12	37.50	phloem protein 2-A6	[more]
AT1G65390.1	2.0e-09	36.13	phloem protein 2 A5	[more]

BLAST of Lsi06G007160 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|802585221\|ref\|XP_012070309.1\|	4.2e-17	40.00	PREDICTED: protein PHLOEM PROTEIN 2-LIKE A1-like [Jatropha curcas]	[more]
gi\|702355413\|ref\|XP_010058634.1\|	9.4e-17	36.52	PREDICTED: protein PHLOEM PROTEIN 2-LIKE A1-like [Eucalyptus grandis]	[more]
gi\|659121464\|ref\|XP_008460673.1\|	1.6e-16	41.53	PREDICTED: uncharacterized protein PHLOEM PROTEIN 2-LIKE A4-like [Cucumis melo]	[more]
gi\|778694948\|ref\|XP_011653899.1\|	1.6e-16	42.37	PREDICTED: protein PHLOEM PROTEIN 2-LIKE A1 [Cucumis sativus]	[more]
gi\|902174101\|gb\|KNA08366.1\|	2.1e-16	36.80	hypothetical protein SOVF_163150 [Spinacia oleracea]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR025886	PP2-like

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi06G007160.1	Lsi06G007160.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025886	Phloem protein 2-like	PFAM	PF14299	PP2	coord: 13..128 score: 1.2
None	No IPR available	PANTHER	PTHR32278	FAMILY NOT NAMED	coord: 13..128 score: 2.9
None	No IPR available	PANTHER	PTHR32278:SF3	SUBFAMILY NOT NAMED	coord: 13..128 score: 2.9

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi06G007160	Bhi02G001083	Wax gourd	lsiwgoB521

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi06G007160	Cucumber (Gy14) v1	cgylsiB573
Lsi06G007160	Cucurbita maxima (Rimu)	cmalsiB073
Lsi06G007160	Cucurbita maxima (Rimu)	cmalsiB128
Lsi06G007160	Cucurbita moschata (Rifu)	cmolsiB059
Lsi06G007160	Cucurbita moschata (Rifu)	cmolsiB118
Lsi06G007160	Cucurbita pepo (Zucchini)	cpelsiB017
Lsi06G007160	Cucurbita pepo (Zucchini)	cpelsiB299
Lsi06G007160	Wild cucumber (PI 183967)	cpilsiB059
Lsi06G007160	Wild cucumber (PI 183967)	cpilsiB080
Lsi06G007160	Cucumber (Chinese Long) v2	culsiB058
Lsi06G007160	Cucumber (Chinese Long) v2	culsiB082
Lsi06G007160	Melon (DHL92) v3.5.1	lsimeB398
Lsi06G007160	Watermelon (Charleston Gray)	lsiwcgB361
Lsi06G007160	Watermelon (Charleston Gray)	lsiwcgB365
Lsi06G007160	Watermelon (97103) v1	lsiwmB391
Lsi06G007160	Watermelon (97103) v1	lsiwmB399
Lsi06G007160	Cucumber (Gy14) v2	cgyblsiB055
Lsi06G007160	Cucumber (Gy14) v2	cgyblsiB076
Lsi06G007160	Melon (DHL92) v3.6.1	lsimedB420
Lsi06G007160	Silver-seed gourd	carlsiB886
Lsi06G007160	Cucumber (Chinese Long) v3	cuclsiB068
Lsi06G007160	Cucumber (Chinese Long) v3	cuclsiB090
Lsi06G007160	Watermelon (97103) v2	lsiwmbB362
Lsi06G007160	Watermelon (97103) v2	lsiwmbB366