Bhi02G001083 (gene) Wax gourd

Overview
NameBhi02G001083
Typegene
OrganismBenincasa hispida (Wax gourd)
DescriptionPhloem protein 2-like protein
Locationchr2 : 32069062 .. 32070452 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TCTCCTCCAAAGTCCAATTCTTTTAGTGGCAAACAAAAGAGAAAACAATGAGCACACAATTTGCGGCATTTCCGAGAGCTCTCACAATAGCATGGAGTGAAAACAACGAATACTGGAAATGGAACAAGGAGGAACGTTGCAGGTATAATCTTAAACCCAAATTTTATTTGTTCATTACCAAAAGCTTTCATTATTGTCCACTCTTTTGTTCTGTTCATAACAATATAAACTAATTATTAATTTCATTATGCATCAATGAGTGATAGACCGTGCTAGACTTCAATCACCCAATGGTAGAAGTCTATCGTGGTCTATCATTGATAGACGGTATCATTTTGCTATGTTTATAAATAAATTGGTTCATTTCCCTTTATTTGAAAACATTCTTATATCTTATGCTATATTATATTATTATGAGATATAAAAACATGTGATGAAGATCAATTTTGAATAAGCTTAATACATATGATTCACTTCTAAATAAATTAAAATAAAATAGGATTTGTTTTTTTTTTTTAAAGAAATTAGTTTTATCCCTAAAATAAGAGGAAGAATAATATAATTTAGTAAGAACGTGTTTGGTCGACTTTGGAGAAAGAAAGAGTTGCCTTTACTCAATGTAATCTCTCTCATTATGGTGTTTAAAAACTTGTAGTTATACAATCGAAGATGCAGAACTTCTTGAGGTATCTTGGTTTGATTGTTTCATTGACGTGAGTGCTTCTAGCTTAAAACAAAATACTTGATACACAGTAAATATGGAGGTGATGTTGAAAGATAATGCCAATGGATGGGACCTTCCTGTGACCAAGAAAATCGTGATGCTAGATGGGAGCGAGGAAGAGTCTAAAGAAATACTACAGAATAAGCCAAGAAATGAGTGGTTCAATATCTTGATAGGAAAAGTCTTACTACGGAGCAGTGGGTTGGTTCAATTTCAGCTGTCTCAACTTGGAAAACATTGGAAGTCAGGGATGATCATAAGAGCCCTGTAGTGAACGCATAAAAATGAGCCTGAGAATAATATGTTAAGAGATCAATATAAAGTAATAGAATGAAATGATAAATAATAGGTCCTTTTATTTCCAAGTAAGAAGGGTAAGTTTAGACACTTTATGTTTTAGTTATATGTTAAATGTTGAATACATGTGAAATGATAAATAATACAACCTTTTGCGTACTAGCAATAAGGTTAGTTTAAACACTTTAGTATGATTTTCAATCAAATATGTATTAATACCAAGATCTAAGTGAATCATGTTATTATTAATCATTTGAATTTACATAAGTTCTTTCCATCTAACTAGAATATAAGGAATAAACTAAAATCGTAGTACTCTTGATTGTACCATAGCACTTTCCTATTGTCATATTTAAGTCTGTAATAATGC

mRNA sequence

TCTCCTCCAAAGTCCAATTCTTTTAGTGGCAAACAAAAGAGAAAACAATGAGCACACAATTTGCGGCATTTCCGAGAGCTCTCACAATAGCATGGAGTGAAAACAACGAATACTGGAAATGGAACAAGGAGGAACGTTGCAGTTATACAATCGAAGATGCAGAACTTCTTGAGGTATCTTGGTTTGATTGTTTCATTGACGTGAGTGCTTCTAGCTTAAAACAAAATACTTGATACACAGTAAATATGGAGGTGATGTTGAAAGATAATGCCAATGGATGGGACCTTCCTGTGACCAAGAAAATCGTGATGCTAGATGGGAGCGAGGAAGAGTCTAAAGAAATACTACAGAATAAGCCAAGAAATGAGTGGTTCAATATCTTGATAGGAAAAGTCTTACTACGGAGCAGTGGGTTGGTTCAATTTCAGCTGTCTCAACTTGGAAAACATTGGAAGTCAGGGATGATCATAAGAGCCCTGTAGTGAACGCATAAAAATGAGCCTGAGAATAATATGTTAAGAGATCAATATAAAGTAATAGAATGAAATGATAAATAATAGGTCCTTTTATTTCCAAGTAAGAAGGGTAAGTTTAGACACTTTATGTTTTAGTTATATGTTAAATGTTGAATACATGTGAAATGATAAATAATACAACCTTTTGCGTACTAGCAATAAGGTTAGTTTAAACACTTTAGTATGATTTTCAATCAAATATGTATTAATACCAAGATCTAAGTGAATCATGTTATTATTAATCATTTGAATTTACATAAGTTCTTTCCATCTAACTAGAATATAAGGAATAAACTAAAATCGTAGTACTCTTGATTGTACCATAGCACTTTCCTATTGTCATATTTAAGTCTGTAATAATGC

Coding sequence (CDS)

ATGGAGGTGATGTTGAAAGATAATGCCAATGGATGGGACCTTCCTGTGACCAAGAAAATCGTGATGCTAGATGGGAGCGAGGAAGAGTCTAAAGAAATACTACAGAATAAGCCAAGAAATGAGTGGTTCAATATCTTGATAGGAAAAGTCTTACTACGGAGCAGTGGGTTGGTTCAATTTCAGCTGTCTCAACTTGGAAAACATTGGAAGTCAGGGATGATCATAAGAGCCCTGTAG

Protein sequence

MEVMLKDNANGWDLPVTKKIVMLDGSEEESKEILQNKPRNEWFNILIGKVLLRSSGLVQFQLSQLGKHWKSGMIIRAL
Homology
[Close]
BLAST of Bhi02G001083 vs. Swiss-Prot
Match: sp|C0HJV2|LEC_LUFAC (Lectin OS=Luffa acutangula OX=56866 PE=1 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 7.5e-09
Identity = 32/80 (40.00%), Postives = 51/80 (63.75%), Query Frame = 0 

Query: 2   EVMLKDNANGWDLPVTKKIVMLDGSEEESKEILQNKPRNEWFNILIGKVLL---RSSGLV 61
           EVML ++A+GW +PV  K+ M DGSE+ES+  LQ+KPR  WF I +G   +    + G +
Sbjct: 125 EVMLTNSASGWRIPVDVKLKMPDGSEQESQVNLQDKPRGVWFFISVGHFKISVGETIGNI 184

Query: 62  QFQLSQLGKHWKSGMIIRAL 79
           +F + Q  +  K G++++ L
Sbjct: 185 EFSIVQ-HQEAKRGLLVKGL 203

[Close]
BLAST of Bhi02G001083 vs. Swiss-Prot
Match: sp|O81865|P2A01_ARATH (Protein PHLOEM PROTEIN 2-LIKE A1 OS=Arabidopsis thaliana OX=3702 GN=PP2A1 PE=2 SV=1)

HSP 1 Score: 47.4 bits (111), Expect = 8.6e-05
Identity = 26/82 (31.71%), Postives = 45/82 (54.88%), Query Frame = 0 

Query: 2   EVMLKDNANGWDLPVTKKIVMLDGSE--EESKEILQNKPRNEWFNILIGKVLLRSS--GL 61
           +V L+D A GWD PV  K+V+ +G E  +E K  L+  PR +W ++ +G+ +   S  G 
Sbjct: 159 KVKLEDPAYGWDTPVNLKLVLPNGKEKPQEKKVSLRELPRYKWVDVRVGEFVPEKSAAGE 218

Query: 62  VQFQL-SQLGKHWKSGMIIRAL 79
           + F +       WK G+ ++ +
Sbjct: 219 ITFSMYEHAAGVWKKGLSLKGV 240

[Close]
BLAST of Bhi02G001083 vs. TAIR10
Match: AT4G19840.1 (phloem protein 2-A1)

HSP 1 Score: 47.4 bits (111), Expect = 4.8e-06
Identity = 26/82 (31.71%), Postives = 45/82 (54.88%), Query Frame = 0 

Query: 2   EVMLKDNANGWDLPVTKKIVMLDGSE--EESKEILQNKPRNEWFNILIGKVLLRSS--GL 61
           +V L+D A GWD PV  K+V+ +G E  +E K  L+  PR +W ++ +G+ +   S  G 
Sbjct: 159 KVKLEDPAYGWDTPVNLKLVLPNGKEKPQEKKVSLRELPRYKWVDVRVGEFVPEKSAAGE 218

Query: 62  VQFQL-SQLGKHWKSGMIIRAL 79
           + F +       WK G+ ++ +
Sbjct: 219 ITFSMYEHAAGVWKKGLSLKGV 240

[Close]
BLAST of Bhi02G001083 vs. TrEMBL
Match: tr|A0A2U1NK83|A0A2U1NK83_ARTAN (Phloem protein 2-A1 OS=Artemisia annua OX=35608 GN=CTI12_AA256670 PE=4 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 4.1e-12
Identity = 32/78 (41.03%), Postives = 55/78 (70.51%), Query Frame = 0 

Query: 3   VMLKDNANGWDLPVTKKIVMLDGSEEESKEILQNKPRNEWFNILIGKVLL--RSSGLVQF 62
           VML D ANGW++P+  ++V+ DGS++E KE +  KPR++WF I +G+ ++  +  G V+F
Sbjct: 158 VMLNDRANGWEVPINIRLVLPDGSKQEHKENIMEKPRSKWFEIPVGEFMVGAKKGGFVEF 217

Query: 63  QLSQLGKHWKSGMIIRAL 79
            L Q G +WK G++++ +
Sbjct: 218 SLYQQGINWKKGLLVKGV 235

[Close]
BLAST of Bhi02G001083 vs. TrEMBL
Match: tr|Q8L4J1|Q8L4J1_CUCME (17 kDa phloem lectin Lec17-1 OS=Cucumis melo OX=3656 GN=LEC17 PE=2 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 4.6e-11
Identity = 35/81 (43.21%), Postives = 55/81 (67.90%), Query Frame = 0 

Query: 1   MEVMLKDNANGWDLPVTKKIVMLDGSEEESKEILQNKPRNEWFNILIGKVLLR---SSGL 60
           +EVM+ + A+GWD+P+  +I M DGS++ES+ +L  K  N WF I +GK ++    +SG+
Sbjct: 70  IEVMMANTASGWDIPLNLEIDMPDGSKQESQIVLAGKQPNVWFKIPLGKFIISGSVTSGI 129

Query: 61  VQFQLSQLGKHWKSGMIIRAL 79
           ++F     G HWK G+I+RAL
Sbjct: 130 LRFGFYNHGGHWKRGLIVRAL 150

[Close]
BLAST of Bhi02G001083 vs. TrEMBL
Match: tr|A0A1S3CQ49|A0A1S3CQ49_CUCME (uncharacterized protein PHLOEM PROTEIN 2-LIKE A4-like OS=Cucumis melo OX=3656 GN=LOC103503411 PE=4 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 1.0e-10
Identity = 35/81 (43.21%), Postives = 54/81 (66.67%), Query Frame = 0 

Query: 1   MEVMLKDNANGWDLPVTKKIVMLDGSEEESKEILQNKPRNEWFNILIGKVLLR---SSGL 60
           +EVM+ + A+GWD+P+  +I M DGS++ES+ +L  K  N WF I +GK ++    +SG 
Sbjct: 70  IEVMMANTASGWDIPLNLEIDMPDGSKQESQIVLAGKQPNVWFKIPLGKFIISGSVTSGR 129

Query: 61  VQFQLSQLGKHWKSGMIIRAL 79
           ++F     G HWK G+I+RAL
Sbjct: 130 IRFGCYNHGGHWKRGLIVRAL 150

[Close]
BLAST of Bhi02G001083 vs. TrEMBL
Match: tr|A0A1S3CE66|A0A1S3CE66_CUCME (uncharacterized protein PHLOEM PROTEIN 2-LIKE A4-like OS=Cucumis melo OX=3656 GN=LOC103499442 PE=4 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 1.3e-10
Identity = 34/81 (41.98%), Postives = 55/81 (67.90%), Query Frame = 0 

Query: 1   MEVMLKDNANGWDLPVTKKIVMLDGSEEESKEILQNKPRNEWFNILIGKVLLRS---SGL 60
           ++VM+ + A+GW++P+  +I M DGS++ES+ +L  K  N WF I +GK ++ S   SG+
Sbjct: 70  VDVMMTNTASGWNIPLNIEIDMPDGSKQESQIVLAGKQPNVWFKIPLGKFIISSSVTSGI 129

Query: 61  VQFQLSQLGKHWKSGMIIRAL 79
           ++F     G HWK G+I+RAL
Sbjct: 130 IRFGFYNHGGHWKRGLIVRAL 150

[Close]
BLAST of Bhi02G001083 vs. TrEMBL
Match: tr|Q8LK96|Q8LK96_CUCME (17 kDa phloem lectin Lec17-3 OS=Cucumis melo OX=3656 PE=2 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 1.7e-10
Identity = 34/81 (41.98%), Postives = 54/81 (66.67%), Query Frame = 0 

Query: 1   MEVMLKDNANGWDLPVTKKIVMLDGSEEESKEILQNKPRNEWFNILIGKVLLR---SSGL 60
           +EVM+ + A+GWD+P+  +I M DGS++ES+ +L  K  N WF I +GK ++    +SG+
Sbjct: 70  IEVMMANTASGWDIPLNLEIDMPDGSKQESQIVLAGKQPNVWFKIPLGKFIISGSVTSGI 129

Query: 61  VQFQLSQLGKHWKSGMIIRAL 79
           ++F     G HWK G+ +RAL
Sbjct: 130 LRFGFYNHGGHWKRGLTVRAL 150

[Close]
BLAST of Bhi02G001083 vs. NCBI nr
Match: PWA73923.1 (phloem protein 2-A1 [Artemisia annua])

HSP 1 Score: 79.3 bits (194), Expect = 6.3e-12
Identity = 32/78 (41.03%), Postives = 55/78 (70.51%), Query Frame = 0 

Query: 3   VMLKDNANGWDLPVTKKIVMLDGSEEESKEILQNKPRNEWFNILIGKVLL--RSSGLVQF 62
           VML D ANGW++P+  ++V+ DGS++E KE +  KPR++WF I +G+ ++  +  G V+F
Sbjct: 158 VMLNDRANGWEVPINIRLVLPDGSKQEHKENIMEKPRSKWFEIPVGEFMVGAKKGGFVEF 217

Query: 63  QLSQLGKHWKSGMIIRAL 79
            L Q G +WK G++++ +
Sbjct: 218 SLYQQGINWKKGLLVKGV 235

[Close]
BLAST of Bhi02G001083 vs. NCBI nr
Match: NP_001292578.1 (uncharacterized protein LOC103503105 [Cucumis melo] >AAM74923.1 17 kDa phloem lectin Lec17-1 [Cucumis melo] >AAM77341.1 17 kDa phloem lectin [Cucumis melo])

HSP 1 Score: 75.9 bits (185), Expect = 6.9e-11
Identity = 35/81 (43.21%), Postives = 55/81 (67.90%), Query Frame = 0 

Query: 1   MEVMLKDNANGWDLPVTKKIVMLDGSEEESKEILQNKPRNEWFNILIGKVLLR---SSGL 60
           +EVM+ + A+GWD+P+  +I M DGS++ES+ +L  K  N WF I +GK ++    +SG+
Sbjct: 70  IEVMMANTASGWDIPLNLEIDMPDGSKQESQIVLAGKQPNVWFKIPLGKFIISGSVTSGI 129

Query: 61  VQFQLSQLGKHWKSGMIIRAL 79
           ++F     G HWK G+I+RAL
Sbjct: 130 LRFGFYNHGGHWKRGLIVRAL 150

[Close]
BLAST of Bhi02G001083 vs. NCBI nr
Match: XP_008465821.1 (PREDICTED: uncharacterized protein PHLOEM PROTEIN 2-LIKE A4-like [Cucumis melo])

HSP 1 Score: 74.7 bits (182), Expect = 1.5e-10
Identity = 35/81 (43.21%), Postives = 54/81 (66.67%), Query Frame = 0 

Query: 1   MEVMLKDNANGWDLPVTKKIVMLDGSEEESKEILQNKPRNEWFNILIGKVLLR---SSGL 60
           +EVM+ + A+GWD+P+  +I M DGS++ES+ +L  K  N WF I +GK ++    +SG 
Sbjct: 70  IEVMMANTASGWDIPLNLEIDMPDGSKQESQIVLAGKQPNVWFKIPLGKFIISGSVTSGR 129

Query: 61  VQFQLSQLGKHWKSGMIIRAL 79
           ++F     G HWK G+I+RAL
Sbjct: 130 IRFGCYNHGGHWKRGLIVRAL 150

[Close]
BLAST of Bhi02G001083 vs. NCBI nr
Match: XP_008460673.1 (PREDICTED: uncharacterized protein PHLOEM PROTEIN 2-LIKE A4-like [Cucumis melo])

HSP 1 Score: 74.3 bits (181), Expect = 2.0e-10
Identity = 34/81 (41.98%), Postives = 55/81 (67.90%), Query Frame = 0 

Query: 1   MEVMLKDNANGWDLPVTKKIVMLDGSEEESKEILQNKPRNEWFNILIGKVLLRS---SGL 60
           ++VM+ + A+GW++P+  +I M DGS++ES+ +L  K  N WF I +GK ++ S   SG+
Sbjct: 70  VDVMMTNTASGWNIPLNIEIDMPDGSKQESQIVLAGKQPNVWFKIPLGKFIISSSVTSGI 129

Query: 61  VQFQLSQLGKHWKSGMIIRAL 79
           ++F     G HWK G+I+RAL
Sbjct: 130 IRFGFYNHGGHWKRGLIVRAL 150

[Close]
BLAST of Bhi02G001083 vs. NCBI nr
Match: AAM74924.1 (17 kDa phloem lectin Lec17-3 [Cucumis melo])

HSP 1 Score: 73.9 bits (180), Expect = 2.6e-10
Identity = 34/81 (41.98%), Postives = 54/81 (66.67%), Query Frame = 0 

Query: 1   MEVMLKDNANGWDLPVTKKIVMLDGSEEESKEILQNKPRNEWFNILIGKVLLR---SSGL 60
           +EVM+ + A+GWD+P+  +I M DGS++ES+ +L  K  N WF I +GK ++    +SG+
Sbjct: 70  IEVMMANTASGWDIPLNLEIDMPDGSKQESQIVLAGKQPNVWFKIPLGKFIISGSVTSGI 129

Query: 61  VQFQLSQLGKHWKSGMIIRAL 79
           ++F     G HWK G+ +RAL
Sbjct: 130 LRFGFYNHGGHWKRGLTVRAL 150

The following BLAST results are available for this feature:
BLAST of Bhi02G001083 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|C0HJV2|LEC_LUFAC7.5e-0940.00Lectin OS=Luffa acutangula OX=56866 PE=1 SV=1[more]
sp|O81865|P2A01_ARATH8.6e-0531.71Protein PHLOEM PROTEIN 2-LIKE A1 OS=Arabidopsis thaliana OX=3702 GN=PP2A1 PE=2 S... [more]
BLAST of Bhi02G001083 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G19840.14.8e-0631.71phloem protein 2-A1[more]
BLAST of Bhi02G001083 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A2U1NK83|A0A2U1NK83_ARTAN4.1e-1241.03Phloem protein 2-A1 OS=Artemisia annua OX=35608 GN=CTI12_AA256670 PE=4 SV=1[more]
tr|Q8L4J1|Q8L4J1_CUCME4.6e-1143.2117 kDa phloem lectin Lec17-1 OS=Cucumis melo OX=3656 GN=LEC17 PE=2 SV=1[more]
tr|A0A1S3CQ49|A0A1S3CQ49_CUCME1.0e-1043.21uncharacterized protein PHLOEM PROTEIN 2-LIKE A4-like OS=Cucumis melo OX=3656 GN... [more]
tr|A0A1S3CE66|A0A1S3CE66_CUCME1.3e-1041.98uncharacterized protein PHLOEM PROTEIN 2-LIKE A4-like OS=Cucumis melo OX=3656 GN... [more]
tr|Q8LK96|Q8LK96_CUCME1.7e-1041.9817 kDa phloem lectin Lec17-3 OS=Cucumis melo OX=3656 PE=2 SV=1[more]
BLAST of Bhi02G001083 vs. NCBI nr
Match NameE-valueIdentityDescription
PWA73923.16.3e-1241.03phloem protein 2-A1 [Artemisia annua][more]
NP_001292578.16.9e-1143.21uncharacterized protein LOC103503105 [Cucumis melo] >AAM74923.1 17 kDa phloem le... [more]
XP_008465821.11.5e-1043.21PREDICTED: uncharacterized protein PHLOEM PROTEIN 2-LIKE A4-like [Cucumis melo][more]
XP_008460673.12.0e-1041.98PREDICTED: uncharacterized protein PHLOEM PROTEIN 2-LIKE A4-like [Cucumis melo][more]
AAM74924.12.6e-1041.9817 kDa phloem lectin Lec17-3 [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR025886PP2-like
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi02M001083Bhi02M001083mRNA


InterPro
Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025886Phloem protein 2-likePFAMPF14299PP2coord: 3..76
e-value: 1.3E-5
score: 25.3
NoneNo IPR availablePANTHERPTHR32278FAMILY NOT NAMEDcoord: 2..77
NoneNo IPR availablePANTHERPTHR32278:SF3SUBFAMILY NOT NAMEDcoord: 2..77

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Bhi02G001083Lsi06G007160Bottle gourd (USVL1VR-Ls)lsiwgoB521
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Bhi02G001083Cucumber (Gy14) v2cgybwgoB103
Bhi02G001083Cucurbita maxima (Rimu)cmawgoB0085
Bhi02G001083Cucurbita maxima (Rimu)cmawgoB0169
Bhi02G001083Cucurbita moschata (Rifu)cmowgoB0162
Bhi02G001083Wild cucumber (PI 183967)cpiwgoB111
Bhi02G001083Cucumber (Chinese Long) v3cucwgoB115
Bhi02G001083Cucumber (Chinese Long) v3cucwgoB118
Bhi02G001083Cucumber (Chinese Long) v2cuwgoB110
Bhi02G001083Bottle gourd (USVL1VR-Ls)lsiwgoB511
Bhi02G001083Melon (DHL92) v3.6.1medwgoB310