Lsi06G007110 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi06G007110
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionJasmonate-induced protein
Locationchr06 : 11596668 .. 11599359 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TATAGCCTCAACGAAGTGTAAGATTTAGAAATTTCACTTCTCTTTCCATCTCTTAAATTGAGACCACTTGGTAAATATTAGTATTATTGCTTTCTCATACTGTCTTCGCCTTTGTTGGTTTTAATATATATAAACAATCATTAAATTTTTATTGTATATAAATTAATTTAAGAAAAAAAATCATTTTTTATTTTTTCCATCCGTATGTTACAGCTTGTTTCTATTGTTTTATAGTGTTAAAGTTTCTACCTTTATTATCTTATAACTTTTTTTTAATGTTTTTTTAAAGAGTTCTAAGTGAAAACTTTCACTTTTATTTTTTCTAATTTGAAACTATAGAAAACAAATGAATTAATAAAACAATTTTCTACTATTTAATAAATTTGCAAAAAAAAATAAATAAATATTTTTACTAAATAGATTTTTGTTCATTTTTCTTAAAAAGAATTGTGAAATAAGAATGATAACATGACATCCCTCTCCATTACTTTTAGCAAGTCTGATTTTATGGGTTTTTCTTTTCTATTTCAGATTATATATTTGAAGATGGTAAACAGTGTGTTTGGTAGTCCAATTACAGACGAAATTCTAAAAATCATGCCTGAATATGAAGGGAAGACAATAACACGTCGAGATAGAGCACATGTGGCACTTAATATGAAGAATGCTCAAGAAAAAGACAAACATGCTCGAGAATATGTACAAATGTTGAAGGAACAATGGGGAGATGGAGTTTCTACTCTTTGCTTAATTTATAATGCCACAGGTGATACCATAAAATTTGTTTGTGAACACAGTTGGTTTGGTGATATTGGGCCTGGTCCTTATCCAATGGATATTGCAAATGGTCAATGGGGCGGGTTTCTTCATGTTAAAAACTTTGGACCCACAGGCTCTTGTGGTGCTGTTATATATCGTGGTTTAAATAATGATGGTGTGCATTGTGATTGGATGACAGCATGGTCCAATCCCTTCTTTCGTCCATTTGCAAATAATGCGGTCAGTCGACTTTTTTCTAACCTATTCTTATGCAAATTCTTTTTTCTGTGTTTCATGCCTAGATTACTTTTTTCATTTGATTTTAGTACCTAAGTTTTTAAAAAATTCATTTCAAATGTTGAGTTTGTAACTGCGTACATTAAATTATAAAAAATTCAGATAGTTGGTAACTAGGGAAAATGTTTAACAAAATTTCATTAATTTTGAATAGAAAAAGTAATATATACGTCTATATATATAAACACATCAAATATTAAAAAATAAATCAAACTATTTATAAATACAGAAAAATTTTACTGTCCTATTAGTGATAAATTGTGATAGATCGGTTAAAAAATAAATCAAACTATTTATAAATACAGAAAAATTTTACTGTCCTATTAGTGATAAATTGTGATAGACTTCTATCGCGATCTATCATTGATAGACAAGAATTTTTTTTTTTTATATTTATAAATAGTTATATTTTTTTCTATTTATAATAATTTCTCTTTTTATTATTATTAAATTACTACTTTTTTTTCTAAGCAATGGCTAGTATGTCCTTTTGAATTTGGAAGGATATGAGAAAAAAATTGACAATACTATTAAGATTTATAATTAAATTGGTTTTGAATATGACAAAACATATCTGAAAAATAAATACAATTTTTACGTAATAAAAAACTTTGCAAAATTTTTATTATTTTGTTTTATTACCTACCTAAAAATAAGTTAAAAGAAATTTATATTAGTTAGAGTTCCTATTTTGCCAAAAATGATTAATTAGTGTTCCTTTCACAGTCTTCTTAAAGATTTGAAACTGATCAATTTGCTAAAATTTAAATGAATCAAATGTAAAATCTTTTAATTTGAATAAAAGAAAACGATATCGTGAATTCATTTTTAATTTTCAAAAGTTTAAATAATTTATTTCATACTCCAAGCTTTCAGCATTATAATTATTTTTTTCAACCTTAAAGATGGCATCAAATGATTGAGATAATCTCACTTTAACTTGAAAATTACTATAAACAGACAAAATATCAAACTATTTACAAATATAGAAAAATTTCATTCTATCAGTGATAGACCGCGATAGAATTCTATCGCTTTCTATCGCTCAAGCAAATAAATTCTATCGTCTGAGCGATAGAAAGCGATAGAATTCTATCGCGATCTATCAGTGATAGACTGTAAAATTTTTCAATATTTGTAAATAGTTTGACTTATTTTTCTATATTTGAAAAGAGCCCTTTATTATATCCATCAAACTAACTATCTAAATTAGATTTTTTTCGAACTATATGTGGAATGGAGGAATCAAACCACTGATTTTGTTCACAAATTTTAGTGGTAGAGATCTATAGTAAATGTAACAAACTTTTTCCTTTTAAAGTTCACTTACTGTTTGTGTTTTTTAGGCATACACCGAGATTCGAGAAGAAGGACATTATGTTAACCATGACCATTGGGAGTACATCTTTAACTTAGTAAAAGACTCTGGTCTTACTCATTTAGACAAGTGGAACAAATGTCTATCATATGCAAGTACAGGAAGTTATACCAGTCCCATATTTGAGGCAACATTCACTCTCGACGAGGCTTGAGTCTCTCTATGTGTGCACCTTAAAAAGAAATGCTTGAAACATTATAATTTATGTACTATTGAACCTATACCTATAAATAATTGCCCATGGGAACTTTTATCTTG

mRNA sequence

TATAGCCTCAACGAAGTGTAAGATTTAGAAATTTCACTTCTCTTTCCATCTCTTAAATTGAGACCACTTGATTATATATTTGAAGATGGTAAACAGTGTGTTTGGTAGTCCAATTACAGACGAAATTCTAAAAATCATGCCTGAATATGAAGGGAAGACAATAACACGTCGAGATAGAGCACATGTGGCACTTAATATGAAGAATGCTCAAGAAAAAGACAAACATGCTCGAGAATATGTACAAATGTTGAAGGAACAATGGGGAGATGGAGTTTCTACTCTTTGCTTAATTTATAATGCCACAGGTGATACCATAAAATTTGTTTGTGAACACAGTTGGTTTGGTGATATTGGGCCTGGTCCTTATCCAATGGATATTGCAAATGGTCAATGGGGCGGGTTTCTTCATGTTAAAAACTTTGGACCCACAGGCTCTTGTGGTGCTGTTATATATCGTGGTTTAAATAATGATGGTGTGCATTGTGATTGGATGACAGCATGGTCCAATCCCTTCTTTCGTCCATTTGCAAATAATGCGGCATACACCGAGATTCGAGAAGAAGGACATTATGTTAACCATGACCATTGGGAGTACATCTTTAACTTAGTAAAAGACTCTGGTCTTACTCATTTAGACAAGTGGAACAAATGTCTATCATATGCAAGTACAGGAAGTTATACCAGTCCCATATTTGAGGCAACATTCACTCTCGACGAGGCTTGAGTCTCTCTATGTGTGCACCTTAAAAAGAAATGCTTGAAACATTATAATTTATGTACTATTGAACCTATACCTATAAATAATTGCCCATGGGAACTTTTATCTTG

Coding sequence (CDS)

ATGGTAAACAGTGTGTTTGGTAGTCCAATTACAGACGAAATTCTAAAAATCATGCCTGAATATGAAGGGAAGACAATAACACGTCGAGATAGAGCACATGTGGCACTTAATATGAAGAATGCTCAAGAAAAAGACAAACATGCTCGAGAATATGTACAAATGTTGAAGGAACAATGGGGAGATGGAGTTTCTACTCTTTGCTTAATTTATAATGCCACAGGTGATACCATAAAATTTGTTTGTGAACACAGTTGGTTTGGTGATATTGGGCCTGGTCCTTATCCAATGGATATTGCAAATGGTCAATGGGGCGGGTTTCTTCATGTTAAAAACTTTGGACCCACAGGCTCTTGTGGTGCTGTTATATATCGTGGTTTAAATAATGATGGTGTGCATTGTGATTGGATGACAGCATGGTCCAATCCCTTCTTTCGTCCATTTGCAAATAATGCGGCATACACCGAGATTCGAGAAGAAGGACATTATGTTAACCATGACCATTGGGAGTACATCTTTAACTTAGTAAAAGACTCTGGTCTTACTCATTTAGACAAGTGGAACAAATGTCTATCATATGCAAGTACAGGAAGTTATACCAGTCCCATATTTGAGGCAACATTCACTCTCGACGAGGCTTGA

Protein sequence

MVNSVFGSPITDEILKIMPEYEGKTITRRDRAHVALNMKNAQEKDKHAREYVQMLKEQWGDGVSTLCLIYNATGDTIKFVCEHSWFGDIGPGPYPMDIANGQWGGFLHVKNFGPTGSCGAVIYRGLNNDGVHCDWMTAWSNPFFRPFANNAAYTEIREEGHYVNHDHWEYIFNLVKDSGLTHLDKWNKCLSYASTGSYTSPIFEATFTLDEA
Homology
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BLAST of Lsi06G007110 vs. Swiss-Prot
Match: JI23_HORVU (23 kDa jasmonate-induced protein OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 5.8e-40
Identity = 87/203 (42.86%), Postives = 126/203 (62.07%), Query Frame = 1 

Query: 1   MVNSVFGSPITDEILKIMPEYEGKTITRRDRAHVALNMKNAQEKDKHAREYVQMLKEQWG 60
           M + VFG+PI+ + +    EY+ + IT++D A  A+ M NA  KD +A+++V  LKE++G
Sbjct: 1   MASGVFGTPISAQTVIATGEYK-EPITQKDVADYAMKMINAGGKDVNAQKFVDNLKERYG 60

Query: 61  DGVSTLCLIYNATGDTIKFVCEHSWFGDIGPGPYPMDIANGQWGGFLHVKNFG-PTGSCG 120
           +G++  CL+YNATG T+ F   + W G I   PYP DI NGQWG FLHV   G   GS G
Sbjct: 61  NGIAVKCLLYNATGATLNFAKYNDWHGHIYDTPYPSDIQNGQWGAFLHVHPSGAAAGSAG 120

Query: 121 AVIYRG-LNNDGVHCDWMTAWSNPFFRPFANNAAYTEIREEGHYVNHDHWEYIFNL-VKD 180
           AV+YR  + +    CDW+ +W+ P+      N  YTEIREEGHY +   W+YI+N+ +K+
Sbjct: 121 AVVYRSKIPSSSSSCDWLFSWTVPY---IGGNGVYTEIREEGHYPSVGSWDYIYNVKLKN 180

Query: 181 SGLTHLDKWNKCLSYASTGSYTS 201
           S +T +D     +S A  G  T+
Sbjct: 181 SSVTSIDSNYGYVSKADIGEGTT 199

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BLAST of Lsi06G007110 vs. TrEMBL
Match: A0A097BU21_CITLA (23 kDa jasmonate-induced protein OS=Citrullus lanatus PE=2 SV=1)

HSP 1 Score: 332.8 bits (852), Expect = 3.1e-88
Identity = 155/213 (72.77%), Postives = 175/213 (82.16%), Query Frame = 1 

Query: 1   MVNSVFGSPITDEILKIMPEYEGKTITRRDRAHVALNMKNAQEKDKHAREYVQMLKEQWG 60
           M  +VFG+PIT+E L  MP+YEGK ITRRDRAHVALNMKNAQ+KDK+AREYV+ LK+QWG
Sbjct: 1   MAYNVFGNPITNETLAAMPDYEGKKITRRDRAHVALNMKNAQDKDKNAREYVERLKQQWG 60

Query: 61  DGVSTLCLIYNATGDTIKFVCEHSWFGDIGPGPYPMDIANGQWGGFLHVKNFG-PTGSCG 120
            GVSTLCLIYNATGDTIKFV EHSW G IGPGPYP++IANGQWGGFLHVK  G  TGS  
Sbjct: 61  TGVSTLCLIYNATGDTIKFVVEHSWHGHIGPGPYPIEIANGQWGGFLHVKTSGTATGSSA 120

Query: 121 AVIYRGLNNDGVHCDWMTAWSNPFFRPFANNAAYTEIREEGHYVNHDHWEYIFNLVKDSG 180
           A +YRGLNNDGV CDWM AWSNP+ R  ++N AYTEIREEGHY  +DHW YI NL+ DSG
Sbjct: 121 ACVYRGLNNDGVVCDWMLAWSNPWNRSSSDNTAYTEIREEGHYTKNDHWNYISNLLYDSG 180

Query: 181 LTHLDKWNKCLSYASTGSYTSPIFEATFTLDEA 213
           L+  DKWNKC+S  +TGS TSPIFE   TL +A
Sbjct: 181 LSSSDKWNKCVSNVTTGSDTSPIFEGILTLQDA 213

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BLAST of Lsi06G007110 vs. TrEMBL
Match: A0A0A0M0F4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G642550 PE=4 SV=1)

HSP 1 Score: 298.1 bits (762), Expect = 8.3e-78
Identity = 139/211 (65.88%), Postives = 167/211 (79.15%), Query Frame = 1 

Query: 1   MVNSVFGSPITDEILKIMPEYEGKTITRRDRAHVALNMKNAQEKDKHAREYVQMLKEQWG 60
           M ++VFG+PIT+  L+ MP+YEGK ITRRDRA+VALNMKNAQ KDK A++YV+ L+E+WG
Sbjct: 1   MADNVFGNPITNSTLQAMPDYEGKVITRRDRAYVALNMKNAQGKDKDAQDYVEKLREEWG 60

Query: 61  DGVSTLCLIYNATGDTIKFVCEHSWFGDIGPGPYPMDIANGQWGGFLHVKN-FGPTGSCG 120
            GV+TLCLIYNATGDTIKFVCE+SW G IGP PYP +I NGQWG FLHVK    P+GS  
Sbjct: 61  SGVATLCLIYNATGDTIKFVCEYSWHGHIGPSPYPSEIENGQWGAFLHVKTAVVPSGSAA 120

Query: 121 AVIYRGLNNDGVHCDWMTAWSNPFFRPFANNAAYTEIREEGHY-VNHDHWEYIFNLVKDS 180
           + +YRG NN+G  CDWM AWSNP+ R FA+N AYTEIRE+GHY   HD+WEYIF+L+ D 
Sbjct: 121 SCVYRGQNNNGQLCDWMVAWSNPYHRLFADNKAYTEIREQGHYEAPHDYWEYIFSLLND- 180

Query: 181 GLTHLDKWNKCLSYASTGSYTSPIFEATFTL 210
            L+H DKWN CLS  STGS T+P+    FTL
Sbjct: 181 -LSHRDKWNGCLSNVSTGSDTNPLCVGIFTL 209

[Close]
BLAST of Lsi06G007110 vs. TrEMBL
Match: M5X699_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa020548mg PE=4 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 5.3e-48
Identity = 108/214 (50.47%), Postives = 130/214 (60.75%), Query Frame = 1 

Query: 1   MVNSVFGSPITDEILKIMPEYEGKTITRRDRAHVALNMKNAQEKDKHAREYVQMLKEQWG 60
           M  +VFG+PI +  LK MPEY+ K I R DRA VAL MKN  +KD  A  +V+ LK+Q G
Sbjct: 1   MAYNVFGNPIQNSTLKGMPEYKLKAIERNDRAKVALQMKNVGDKDLKALTFVENLKKQHG 60

Query: 61  DGVSTLCLIYNATGDTIKFVCEHSWFGDIGPGPYPMDIANGQWGGFLHVKNFG-PTGSCG 120
           DG+STLCLIYNATGDT+ +     W G IG  PYP  IANGQWG FLHV+  G P GS  
Sbjct: 61  DGISTLCLIYNATGDTLTYSISKDWCGHIGHFPYPTLIANGQWGAFLHVQKLGTPEGSVA 120

Query: 121 AVIYRGLNNDGVHCDWMTAWSNPFFRPFANNAAYTEIREEGHYVNHDHW-EYIFNLVKDS 180
            V+Y G N DG     + AWSN   R    N  +TE R   HY+++  W   I++ V  S
Sbjct: 121 TVVYNGKNKDGEDRGRLLAWSNN--RVAYKNKVFTESRTAEHYLDNVGWIPLIYDYVDKS 180

Query: 181 GLTHLDKWNKCLSYASTGSYTSPIFEATFTLDEA 213
           G    +KW  C S  STG  TSPI EA F LD+A
Sbjct: 181 GTYKSEKWGGCFSTISTGYGTSPIVEAIFMLDDA 212

[Close]
BLAST of Lsi06G007110 vs. TrEMBL
Match: M5XVI7_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa022968mg PE=4 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 4.9e-46
Identity = 95/188 (50.53%), Postives = 119/188 (63.30%), Query Frame = 1 

Query: 24  KTITRRDRAHVALNMKNAQEKDKHAREYVQMLKEQWGDGVSTLCLIYNATGDTIKFVCEH 83
           K I R++RAHVALNM+NA+ KD +AR YV+ LK+Q G GVSTLCL+YNATGDTI+ V   
Sbjct: 1   KKIGRKERAHVALNMENAEGKDINARNYVENLKKQSGYGVSTLCLVYNATGDTIRLVASK 60

Query: 84  SWFGDIGPGPYPMDIANGQWGGFLHV---KNFGPTGSCGAVIYRGLNNDGVHCDWMTAWS 143
            W+G+IG  PYP  IANGQWG FLHV         GS  AV YRG NN+G +CDW+  W 
Sbjct: 61  DWYGNIGRAPYPTQIANGQWGAFLHVIKTSGMATGGSVAAVAYRGKNNNGNNCDWLLGWR 120

Query: 144 NPFFRPF--ANNAAYTEIREEGHYVNHDHWEYIFNLVKDSGLTHLDKWNKCLSYASTGSY 203
           NP+  P   + N  YTEIRE  HY     W  ++N +  SG+     WN C S  S+G  
Sbjct: 121 NPWNGPLSTSTNKVYTEIREARHYEPAGVWPGVYNSLVGSGVCSSGTWNGCFSTISSGCS 180

Query: 204 TSPIFEAT 207
            + + E+T
Sbjct: 181 ITKLHEST 188

[Close]
BLAST of Lsi06G007110 vs. TrEMBL
Match: M0T1C4_MUSAM (Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 1.3e-38
Identity = 92/210 (43.81%), Postives = 123/210 (58.57%), Query Frame = 1 

Query: 3   NSVFGSPITDEILKIMPEYEGKTITRRDRAHVALNMKNAQEKDKHAREYVQMLKEQWGDG 62
           N+VFG PITDE L+ + EY  K   R+ R  +AL+ +    K + A +YV+ +KE+WG G
Sbjct: 21  NNVFGDPITDETLEGVTEYAKKL--RKLRVAMALDTQMKGNKYESALKYVREMKERWGTG 80

Query: 63  VSTLCLIYNATGDTIKFVCEHSWFGDI-GPGPYPMDIANGQWGGFLHVKNFG-PTGSCGA 122
           VSTLCL+YNATG+ +     H W+G I    PYPM I NGQWG +LHVK  G P GS  A
Sbjct: 81  VSTLCLVYNATGEPLTLHSTHDWWGHIYDQSPYPMRIGNGQWGAYLHVKRSGTPDGSNAA 140

Query: 123 VIYRGLNNDGVHCDWMTAWSNPFFRPFANNAAYTEIREEGHYVNHDHWEYIFNLVKDSGL 182
           V+YRG N+ G   D +  W NP+ +   +N AY EI + G+Y N D W  I     ++G 
Sbjct: 141 VVYRGKNDGGDDTDSLLFWDNPWNKASYSNQAYAEINQAGYYDNID-WGVIAGKGSNAGP 200

Query: 183 THLDKWNKCLSYASTGSYTSPIFEATFTLD 211
            +   W  C+S     S T+  FEAT T +
Sbjct: 201 QYRAAWKGCVSTVVIESGTTAKFEATLTFE 227

[Close]
BLAST of Lsi06G007110 vs. NCBI nr
Match: gi|694188379|gb|AIS71930.1| (23 kDa jasmonate-induced protein [Citrullus lanatus])

HSP 1 Score: 332.8 bits (852), Expect = 4.4e-88
Identity = 155/213 (72.77%), Postives = 175/213 (82.16%), Query Frame = 1 

Query: 1   MVNSVFGSPITDEILKIMPEYEGKTITRRDRAHVALNMKNAQEKDKHAREYVQMLKEQWG 60
           M  +VFG+PIT+E L  MP+YEGK ITRRDRAHVALNMKNAQ+KDK+AREYV+ LK+QWG
Sbjct: 1   MAYNVFGNPITNETLAAMPDYEGKKITRRDRAHVALNMKNAQDKDKNAREYVERLKQQWG 60

Query: 61  DGVSTLCLIYNATGDTIKFVCEHSWFGDIGPGPYPMDIANGQWGGFLHVKNFG-PTGSCG 120
            GVSTLCLIYNATGDTIKFV EHSW G IGPGPYP++IANGQWGGFLHVK  G  TGS  
Sbjct: 61  TGVSTLCLIYNATGDTIKFVVEHSWHGHIGPGPYPIEIANGQWGGFLHVKTSGTATGSSA 120

Query: 121 AVIYRGLNNDGVHCDWMTAWSNPFFRPFANNAAYTEIREEGHYVNHDHWEYIFNLVKDSG 180
           A +YRGLNNDGV CDWM AWSNP+ R  ++N AYTEIREEGHY  +DHW YI NL+ DSG
Sbjct: 121 ACVYRGLNNDGVVCDWMLAWSNPWNRSSSDNTAYTEIREEGHYTKNDHWNYISNLLYDSG 180

Query: 181 LTHLDKWNKCLSYASTGSYTSPIFEATFTLDEA 213
           L+  DKWNKC+S  +TGS TSPIFE   TL +A
Sbjct: 181 LSSSDKWNKCVSNVTTGSDTSPIFEGILTLQDA 213

[Close]
BLAST of Lsi06G007110 vs. NCBI nr
Match: gi|659086035|ref|XP_008443732.1| (PREDICTED: 23 kDa jasmonate-induced protein-like [Cucumis melo])

HSP 1 Score: 317.8 bits (813), Expect = 1.5e-83
Identity = 144/210 (68.57%), Postives = 170/210 (80.95%), Query Frame = 1 

Query: 1   MVNSVFGSPITDEILKIMPEYEGKTITRRDRAHVALNMKNAQEKDKHAREYVQMLKEQWG 60
           M ++VFG+PIT+  L+ MPEYEGKTITRRDRA+VA NMKNAQ KD+ AR++V+ L+E+WG
Sbjct: 1   MADNVFGNPITNSTLQAMPEYEGKTITRRDRAYVAFNMKNAQNKDRSARDHVEKLREEWG 60

Query: 61  DGVSTLCLIYNATGDTIKFVCEHSWFGDIGPGPYPMDIANGQWGGFLHVKN-FGPTGSCG 120
            GV+TLCLIYNATGDTI FVCEHSW G IG GPYP +IANGQWG FLHVK    P+GS G
Sbjct: 61  HGVATLCLIYNATGDTITFVCEHSWHGHIGSGPYPSEIANGQWGAFLHVKTAVVPSGSAG 120

Query: 121 AVIYRGLNNDGVHCDWMTAWSNPFFRPFANNAAYTEIREEGHYVNHDHWEYIFNLVKDSG 180
           A +YRGLNN G  CDWM AWSNP++R FA+N AYTEIRE+GHY  HDHWEYIF+L+ +S 
Sbjct: 121 ACVYRGLNNYGEVCDWMVAWSNPYYRLFADNTAYTEIREKGHYEAHDHWEYIFDLLNNSS 180

Query: 181 LTHLDKWNKCLSYASTGSYTSPIFEATFTL 210
           L H D+WNKC S  STG+ T+PIFE   TL
Sbjct: 181 LIHSDEWNKCQSKVSTGNDTNPIFEGILTL 210

[Close]
BLAST of Lsi06G007110 vs. NCBI nr
Match: gi|700211516|gb|KGN66612.1| (hypothetical protein Csa_1G642550 [Cucumis sativus])

HSP 1 Score: 298.1 bits (762), Expect = 1.2e-77
Identity = 139/211 (65.88%), Postives = 167/211 (79.15%), Query Frame = 1 

Query: 1   MVNSVFGSPITDEILKIMPEYEGKTITRRDRAHVALNMKNAQEKDKHAREYVQMLKEQWG 60
           M ++VFG+PIT+  L+ MP+YEGK ITRRDRA+VALNMKNAQ KDK A++YV+ L+E+WG
Sbjct: 1   MADNVFGNPITNSTLQAMPDYEGKVITRRDRAYVALNMKNAQGKDKDAQDYVEKLREEWG 60

Query: 61  DGVSTLCLIYNATGDTIKFVCEHSWFGDIGPGPYPMDIANGQWGGFLHVKN-FGPTGSCG 120
            GV+TLCLIYNATGDTIKFVCE+SW G IGP PYP +I NGQWG FLHVK    P+GS  
Sbjct: 61  SGVATLCLIYNATGDTIKFVCEYSWHGHIGPSPYPSEIENGQWGAFLHVKTAVVPSGSAA 120

Query: 121 AVIYRGLNNDGVHCDWMTAWSNPFFRPFANNAAYTEIREEGHY-VNHDHWEYIFNLVKDS 180
           + +YRG NN+G  CDWM AWSNP+ R FA+N AYTEIRE+GHY   HD+WEYIF+L+ D 
Sbjct: 121 SCVYRGQNNNGQLCDWMVAWSNPYHRLFADNKAYTEIREQGHYEAPHDYWEYIFSLLND- 180

Query: 181 GLTHLDKWNKCLSYASTGSYTSPIFEATFTL 210
            L+H DKWN CLS  STGS T+P+    FTL
Sbjct: 181 -LSHRDKWNGCLSNVSTGSDTNPLCVGIFTL 209

[Close]
BLAST of Lsi06G007110 vs. NCBI nr
Match: gi|743780066|ref|XP_010920410.1| (PREDICTED: 23 kDa jasmonate-induced protein-like [Elaeis guineensis])

HSP 1 Score: 251.9 bits (642), Expect = 9.8e-64
Identity = 121/214 (56.54%), Postives = 150/214 (70.09%), Query Frame = 1 

Query: 1   MVNSVFGSPITDEILKIMPEYEGK-TITRRDRAHVALNMKNAQEKDKHAREYVQMLKEQW 60
           M ++VFG+PITD+ L+ +PEY+ K  IT  DRA VALNMKNA  KD +AR++V+ LKE++
Sbjct: 1   MASNVFGNPITDQTLRGLPEYKDKPVITATDRATVALNMKNAGNKDVNARKFVENLKERY 60

Query: 61  GDGVSTLCLIYNATGDTIKFVCEHSWFGDIGPGPYPMDIANGQWGGFLHVKNFG-PTGSC 120
           G+GVSTLCL+YNATG T+ FV  H W G IG  PYP  I NGQWG +LHV   G   GS 
Sbjct: 61  GNGVSTLCLVYNATGGTLNFVLSHDWHGHIGESPYPQQIDNGQWGAYLHVHTSGAAVGSS 120

Query: 121 GAVIYRGLNNDGVHCDWMTAWSNPFFRPFANNAAYTEIREEGHYVNHDHWEYIFNLVKDS 180
            AV+YRG N  G  CDWM  WSNP+ R   +N  YTEIRE  HY +++HW YI + V+ S
Sbjct: 121 AAVVYRGKNEGGTTCDWMFGWSNPWNRWGNDNTVYTEIREYRHYEDNNHWNYIQDKVEGS 180

Query: 181 GLTHLDKWNKCLSYASTGSYTSPIFEATFTLDEA 213
           GLTH D WN C+S  +TGS TSPI +A  TL+ A
Sbjct: 181 GLTHSDTWNGCVSTVATGSSTSPILQAILTLENA 214

[Close]
BLAST of Lsi06G007110 vs. NCBI nr
Match: gi|1009157728|ref|XP_015896910.1| (PREDICTED: 23 kDa jasmonate-induced protein-like [Ziziphus jujuba])

HSP 1 Score: 250.0 bits (637), Expect = 3.7e-63
Identity = 120/210 (57.14%), Postives = 149/210 (70.95%), Query Frame = 1 

Query: 1   MVNSVFGSPITDEILKIMPEYEGKTITRRDRAHVALNMKNAQEKDKHAREYVQMLKEQWG 60
           M ++VFG+PIT   L+ MPEY GK ITR DRAHVALNMKNA+ KD +AR++V+ LKE++G
Sbjct: 1   MGSNVFGNPITTATLEAMPEYIGKVITRTDRAHVALNMKNAEGKDVNARKFVENLKERYG 60

Query: 61  DGVSTLCLIYNATGDTIKFVCEHSWFGDIGPGPYPMDIANGQWGGFLHVKNFG-PTGSCG 120
           +GVSTLCLIYNATGDT+K V  H W G IG  PYP +IANGQWG +LHVK  G  TGS  
Sbjct: 61  NGVSTLCLIYNATGDTLKHVGYHDWRGHIGESPYPNEIANGQWGAYLHVKTSGAATGSIA 120

Query: 121 AVIYRGLNNDGVHCDWMTAWSNPFFRPFANNAAYTEIREEGHYVNHDHWEYIFNLVKDSG 180
           A +YRG N  G  CDWM +W NP+      N  YTEIR EGH+   DHW+YI+N++ +  
Sbjct: 121 ATVYRGKNEAGKDCDWMLSWYNPW---SGKNRVYTEIR-EGHHYEEDHWDYIYNILSNKE 180

Query: 181 LTHLDKWNKCLSYASTGSYTSPIFEATFTL 210
           L++ + WN C+S  +TG  TSPIFE    L
Sbjct: 181 LSYTETWNGCISTVTTGVSTSPIFEGIMKL 206

The following BLAST results are available for this feature:
BLAST of Lsi06G007110 vs. Swiss-Prot
Match NameE-valueIdentityDescription
JI23_HORVU5.8e-4042.8623 kDa jasmonate-induced protein OS=Hordeum vulgare PE=2 SV=1[more]
BLAST of Lsi06G007110 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A097BU21_CITLA3.1e-8872.7723 kDa jasmonate-induced protein OS=Citrullus lanatus PE=2 SV=1[more]
A0A0A0M0F4_CUCSA8.3e-7865.88Uncharacterized protein OS=Cucumis sativus GN=Csa_1G642550 PE=4 SV=1[more]
M5X699_PRUPE5.3e-4850.47Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa020548mg PE=4 SV=1[more]
M5XVI7_PRUPE4.9e-4650.53Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa022968mg PE=4 S... [more]
M0T1C4_MUSAM1.3e-3843.81Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1[more]
BLAST of Lsi06G007110 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of Lsi06G007110 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|694188379|gb|AIS71930.1|4.4e-8872.7723 kDa jasmonate-induced protein [Citrullus lanatus][more]
gi|659086035|ref|XP_008443732.1|1.5e-8368.57PREDICTED: 23 kDa jasmonate-induced protein-like [Cucumis melo][more]
gi|700211516|gb|KGN66612.1|1.2e-7765.88hypothetical protein Csa_1G642550 [Cucumis sativus][more]
gi|743780066|ref|XP_010920410.1|9.8e-6456.54PREDICTED: 23 kDa jasmonate-induced protein-like [Elaeis guineensis][more]
gi|1009157728|ref|XP_015896910.1|3.7e-6357.14PREDICTED: 23 kDa jasmonate-induced protein-like [Ziziphus jujuba][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi06G007110.1Lsi06G007110.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR36482FAMILY NOT NAMEDcoord: 2..211
score: 1.7
NoneNo IPR availablePANTHERPTHR36482:SF2SUBFAMILY NOT NAMEDcoord: 2..211
score: 1.7