Lsi06G006650 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi06G006650
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Jasmonate-induced protein
Location	chr06 : 10171540 .. 10173142 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCATGAATATCACGTAAAGACAATAACACGTCAAGATAGAGCACATGTGGCACTGAACTGGAAGCATGTTGAACATAAATACGAAAAGGCTCGAGATTATGTTAGAAAATTGAAAAGACAATGGGGAACTGGAGTCTCTACCCTTTACTTAATATATAATGCCACAGGAGATACCATAACATATGCTTGCGATCATGACTGGCATGGTCATGTTGGGCCCGGTCCTTATCCAACCGAGATTGAAAATGGTCAATGGGGTGGCGTTCTTCATGTCAAAACCGTTGGTGTTCCCTGTAGCTCTAGTGGCGCTGTGGTATATCATGGTCTAAATAATGATGATGCACATTGTGATTGGATGGCATCTTGGTCCAATTCATGGAATAGAGATTTTTGGAACAATACGGTGAGCCAATTTCCTTTTATGACCTAGAATTTTCATTTTTTATTACTAAACTTCTACAATATATTTTCCATTTTCTATTTTTAATTTAATTTACATGTTATATAATTAAGGTAAATTCAGTCTAATGATCCATAAAAATCACATATTTCATTTTAAATTCAGTCTGAAATATGTCTTCCAATAATCCATAAAAAAATGTTTTGTAAAAGAAAAACTATGTCAGGTTTAAGATTAAATTGATTTTAAATAATTAAAGACATGTTTGAAAGTGAATCACAATTCACAAAATGTAAAACTAATTTTAACCATTCAAATTCCCTCATGTACATACTTAAGTTTGTTATCATCTGACTTCAAACTTTAAAAAAAAATTAACAATAAATAAAAAACTATTTTTACATAATCAAAAAAATACTTCACAGAATTTTTACCTTGTTAACTAATCAATAATATTTAAAATAATTTTTATAGGAAAATTTTTAAAAATAGAAAAATAAGGAAAATTATTTACATAAAATAGCAAAATTTTTAGATAGTTGTGATAGACGCTGATAGAAGTCTATCAGGGTCTATCAGTGATAGAAATGATAGAATTCTATCACTGATAGATGCTGATAGAAGTCTATCAATGTCTATCGGTGTTTTTTTGCTATTTTCTATAAATAGTTTGACATTTTTTCTATCGGTAAAAATTTTCCATATTTTTATAATACTTAGAATTACATTTTACCAAAAATGCTTAATAGGTGTTCTTTCTTGAAAGTACTTTTAGAAAAAGAGCTCGAGTTGAAAAGAAGTACTCCAATATGTTTCAAAAGTCATCTTGCTAAATGTTAACAAATAAACAAGTCTAATTAAAATCGTTAATTTCAATCAAATAAAACAATGTTGTAAATTTATGTCTCAATGGTTAAATTATTTAAATTTCGTTCTGTTTTTTTTTTTAATCAGCGTATCATATTTATCTACTTTGTTTATTTTTAGTCTTTATTTATTATTTTGTGTTTGATAGGTATATACTGAGATTCATGAAAAATGGCATTATCATGGAAATAGCCATTGGAATGACATTTCTAATGCATTAGATAACTTGGGCGTCAACCACTCAAACGAATGGAATGGATGTGTATCAAAAATGGTTACAGAAAAGAGTACTAGTCTCTTATTAGAGGCAATATTCACTCTCGAGAATGCTTAA

mRNA sequence

ATGCATGAATATCACGTAAAGACAATAACACGTCAAGATAGAGCACATGTGGCACTGAACTGGAAGCATGTTGAACATAAATACGAAAAGGCTCGAGATTATGTTAGAAAATTGAAAAGACAATGGGGAACTGGAGTCTCTACCCTTTACTTAATATATAATGCCACAGGAGATACCATAACATATGCTTGCGATCATGACTGGCATGGTCATGTTGGGCCCGGTCCTTATCCAACCGAGATTGAAAATGGTCAATGGGGTGGCGTTCTTCATGTCAAAACCGTTGGTGTTCCCTGTAGCTCTAGTGGCGCTGTGGTATATCATGGTCTAAATAATGATGATGCACATTGTGATTGGATGGCATCTTGGTCCAATTCATGGAATAGAGATTTTTGGAACAATACGGTATATACTGAGATTCATGAAAAATGGCATTATCATGGAAATAGCCATTGGAATGACATTTCTAATGCATTAGATAACTTGGGCGTCAACCACTCAAACGAATGGAATGGATGTGTATCAAAAATGGTTACAGAAAAGAGTACTAGTCTCTTATTAGAGGCAATATTCACTCTCGAGAATGCTTAA

Coding sequence (CDS)

ATGCATGAATATCACGTAAAGACAATAACACGTCAAGATAGAGCACATGTGGCACTGAACTGGAAGCATGTTGAACATAAATACGAAAAGGCTCGAGATTATGTTAGAAAATTGAAAAGACAATGGGGAACTGGAGTCTCTACCCTTTACTTAATATATAATGCCACAGGAGATACCATAACATATGCTTGCGATCATGACTGGCATGGTCATGTTGGGCCCGGTCCTTATCCAACCGAGATTGAAAATGGTCAATGGGGTGGCGTTCTTCATGTCAAAACCGTTGGTGTTCCCTGTAGCTCTAGTGGCGCTGTGGTATATCATGGTCTAAATAATGATGATGCACATTGTGATTGGATGGCATCTTGGTCCAATTCATGGAATAGAGATTTTTGGAACAATACGGTATATACTGAGATTCATGAAAAATGGCATTATCATGGAAATAGCCATTGGAATGACATTTCTAATGCATTAGATAACTTGGGCGTCAACCACTCAAACGAATGGAATGGATGTGTATCAAAAATGGTTACAGAAAAGAGTACTAGTCTCTTATTAGAGGCAATATTCACTCTCGAGAATGCTTAA

Protein sequence

MHEYHVKTITRQDRAHVALNWKHVEHKYEKARDYVRKLKRQWGTGVSTLYLIYNATGDTITYACDHDWHGHVGPGPYPTEIENGQWGGVLHVKTVGVPCSSSGAVVYHGLNNDDAHCDWMASWSNSWNRDFWNNTVYTEIHEKWHYHGNSHWNDISNALDNLGVNHSNEWNGCVSKMVTEKSTSLLLEAIFTLENA

Homology

[Close]

BLAST of Lsi06G006650 vs. Swiss-Prot
Match: JI23_HORVU (23 kDa jasmonate-induced protein OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 5.2e-27
Identity = 70/185 (37.84%), Postives = 102/185 (55.14%), Query Frame = 1


Query: 9   ITRQDRAHVALNWKHVEHKYEKARDYVRKLKRQWGTGVSTLYLIYNATGDTITYACDHDW 68
           IT++D A  A+   +   K   A+ +V  LK ++G G++   L+YNATG T+ +A  +DW
Sbjct: 25  ITQKDVADYAMKMINAGGKDVNAQKFVDNLKERYGNGIAVKCLLYNATGATLNFAKYNDW 84

Query: 69  HGHVGPGPYPTEIENGQWGGVLHVKTVGVPCSSSGAVVYHG-LNNDDAHCDWMASWSNSW 128
           HGH+   PYP++I+NGQWG  LHV   G    S+GAVVY   + +  + CDW+ SW+  +
Sbjct: 85  HGHIYDTPYPSDIQNGQWGAFLHVHPSGAAAGSAGAVVYRSKIPSSSSSCDWLFSWTVPY 144

Query: 129 NRDFWNNTVYTEIHEKWHYHGNSHWNDISNA-LDNLGVNHSNEWNGCVSKMVTEKSTSLL 188
                 N VYTEI E+ HY     W+ I N  L N  V   +   G VSK    + T++ 
Sbjct: 145 ---IGGNGVYTEIREEGHYPSVGSWDYIYNVKLKNSSVTSIDSNYGYVSKADIGEGTTMN 204

Query: 189 LEAIF 192
              +F
Sbjct: 205 ARGVF 206

[Close]

BLAST of Lsi06G006650 vs. TrEMBL
Match: A0A097BU21_CITLA (23 kDa jasmonate-induced protein OS=Citrullus lanatus PE=2 SV=1)

HSP 1 Score: 250.4 bits (638), Expect = 1.8e-63
Identity = 118/196 (60.20%), Postives = 141/196 (71.94%), Query Frame = 1


Query: 1   MHEYHVKTITRQDRAHVALNWKHVEHKYEKARDYVRKLKRQWGTGVSTLYLIYNATGDTI 60
           M +Y  K ITR+DRAHVALN K+ + K + AR+YV +LK+QWGTGVSTL LIYNATGDTI
Sbjct: 18  MPDYEGKKITRRDRAHVALNMKNAQDKDKNAREYVERLKQQWGTGVSTLCLIYNATGDTI 77

Query: 61  TYACDHDWHGHVGPGPYPTEIENGQWGGVLHVKTVGVPCSSSGAVVYHGLNNDDAHCDWM 120
            +  +H WHGH+GPGPYP EI NGQWGG LHVKT G    SS A VY GLNND   CDWM
Sbjct: 78  KFVVEHSWHGHIGPGPYPIEIANGQWGGFLHVKTSGTATGSSAACVYRGLNNDGVVCDWM 137

Query: 121 ASWSNSWNRDFWNNTVYTEIHEKWHYHGNSHWNDISNALDNLGVNHSNEWNGCVSKMVTE 180
            +WSN WNR   +NT YTEI E+ HY  N HWN ISN L + G++ S++WN CVS + T 
Sbjct: 138 LAWSNPWNRSSSDNTAYTEIREEGHYTKNDHWNYISNLLYDSGLSSSDKWNKCVSNVTTG 197

Query: 181 KSTSLLLEAIFTLENA 197
             TS + E I TL++A
Sbjct: 198 SDTSPIFEGILTLQDA 213

[Close]

BLAST of Lsi06G006650 vs. TrEMBL
Match: A0A0A0M0F4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G642550 PE=4 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 2.5e-52
Identity = 102/194 (52.58%), Postives = 137/194 (70.62%), Query Frame = 1


Query: 1   MHEYHVKTITRQDRAHVALNWKHVEHKYEKARDYVRKLKRQWGTGVSTLYLIYNATGDTI 60
           M +Y  K ITR+DRA+VALN K+ + K + A+DYV KL+ +WG+GV+TL LIYNATGDTI
Sbjct: 18  MPDYEGKVITRRDRAYVALNMKNAQGKDKDAQDYVEKLREEWGSGVATLCLIYNATGDTI 77

Query: 61  TYACDHDWHGHVGPGPYPTEIENGQWGGVLHVKTVGVPCSSSGAVVYHGLNNDDAHCDWM 120
            + C++ WHGH+GP PYP+EIENGQWG  LHVKT  VP  S+ + VY G NN+   CDWM
Sbjct: 78  KFVCEYSWHGHIGPSPYPSEIENGQWGAFLHVKTAVVPSGSAASCVYRGQNNNGQLCDWM 137

Query: 121 ASWSNSWNRDFWNNTVYTEIHEKWHYHG-NSHWNDISNALDNLGVNHSNEWNGCVSKMVT 180
            +WSN ++R F +N  YTEI E+ HY   + +W  I + L++L  +H ++WNGC+S + T
Sbjct: 138 VAWSNPYHRLFADNKAYTEIREQGHYEAPHDYWEYIFSLLNDL--SHRDKWNGCLSNVST 197

Query: 181 EKSTSLLLEAIFTL 194
              T+ L   IFTL
Sbjct: 198 GSDTNPLCVGIFTL 209

[Close]

BLAST of Lsi06G006650 vs. TrEMBL
Match: M5XVI7_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa022968mg PE=4 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 4.6e-38
Identity = 91/187 (48.66%), Postives = 113/187 (60.43%), Query Frame = 1


Query: 7   KTITRQDRAHVALNWKHVEHKYEKARDYVRKLKRQWGTGVSTLYLIYNATGDTITYACDH 66
           K I R++RAHVALN ++ E K   AR+YV  LK+Q G GVSTL L+YNATGDTI      
Sbjct: 1   KKIGRKERAHVALNMENAEGKDINARNYVENLKKQSGYGVSTLCLVYNATGDTIRLVASK 60

Query: 67  DWHGHVGPGPYPTEIENGQWGGVLHV-KTVGVPCSSS-GAVVYHGLNNDDAHCDWMASWS 126
           DW+G++G  PYPT+I NGQWG  LHV KT G+    S  AV Y G NN+  +CDW+  W 
Sbjct: 61  DWYGNIGRAPYPTQIANGQWGAFLHVIKTSGMATGGSVAAVAYRGKNNNGNNCDWLLGWR 120

Query: 127 NSWNRDFWNNT--VYTEIHEKWHYHGNSHWNDISNALDNLGVNHSNEWNGCVSKMVTEKS 186
           N WN     +T  VYTEI E  HY     W  + N+L   GV  S  WNGC S + +  S
Sbjct: 121 NPWNGPLSTSTNKVYTEIREARHYEPAGVWPGVYNSLVGSGVCSSGTWNGCFSTISSGCS 180

Query: 187 TSLLLEA 190
            + L E+
Sbjct: 181 ITKLHES 187

[Close]

BLAST of Lsi06G006650 vs. TrEMBL
Match: M5X699_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa020548mg PE=4 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 1.3e-37
Identity = 94/197 (47.72%), Postives = 117/197 (59.39%), Query Frame = 1


Query: 1   MHEYHVKTITRQDRAHVALNWKHVEHKYEKARDYVRKLKRQWGTGVSTLYLIYNATGDTI 60
           M EY +K I R DRA VAL  K+V  K  KA  +V  LK+Q G G+STL LIYNATGDT+
Sbjct: 18  MPEYKLKAIERNDRAKVALQMKNVGDKDLKALTFVENLKKQHGDGISTLCLIYNATGDTL 77

Query: 61  TYACDHDWHGHVGPGPYPTEIENGQWGGVLHVKTVGVPCSSSGAVVYHGLNNDDAHCDWM 120
           TY+   DW GH+G  PYPT I NGQWG  LHV+ +G P  S   VVY+G N D      +
Sbjct: 78  TYSISKDWCGHIGHFPYPTLIANGQWGAFLHVQKLGTPEGSVATVVYNGKNKDGEDRGRL 137

Query: 121 ASWSNSWNRDFWNNTVYTEIHEKWHYHGNSHWND-ISNALDNLGVNHSNEWNGCVSKMVT 180
            +WSN  NR  + N V+TE     HY  N  W   I + +D  G   S +W GC S + T
Sbjct: 138 LAWSN--NRVAYKNKVFTESRTAEHYLDNVGWIPLIYDYVDKSGTYKSEKWGGCFSTIST 197

Query: 181 EKSTSLLLEAIFTLENA 197
              TS ++EAIF L++A
Sbjct: 198 GYGTSPIVEAIFMLDDA 212

[Close]

BLAST of Lsi06G006650 vs. TrEMBL
Match: M0T1C5_MUSAM (Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 7.3e-36
Identity = 83/185 (44.86%), Postives = 109/185 (58.92%), Query Frame = 1


Query: 11  RQDRAHVALNWKHVEHKYEKARDYVRKLKRQWGTGVSTLYLIYNATGDTITYACDHDWHG 70
           R+ R  +AL+ +   +KYE A  YVR++K +WGTGVSTL L+YNATG+ +T    HDW G
Sbjct: 44  RKLRVAMALDTQMEGNKYESALKYVREMKERWGTGVSTLCLVYNATGEPLTLHSTHDWWG 103

Query: 71  HV-GPGPYPTEIENGQWGGVLHVKTVGVPCSSSGAVVYHGLNNDDAHCDWMASWSNSWNR 130
           H+    PYPT+I NGQWG  LHVK  G P  S+ AVVY G N+     D +  W N WN+
Sbjct: 104 HIYDQSPYPTQIGNGQWGAYLHVKRSGTPDGSNAAVVYRGKNDVGDDTDSLLFWDNPWNK 163

Query: 131 DFWNNTVYTEIHEKWHYHGNSHWNDISNALDNLGVNHSNEWNGCVSKMVTEKSTSLLLEA 190
             ++N  Y EI++   Y+ N  W  I++   N G  H   W GCVS +V E  T+   EA
Sbjct: 164 ASYSNKAYAEINQA-GYYDNIDWGVIASKGSNAGPQHRAAWKGCVSTVVIESGTTAKFEA 223

Query: 191 IFTLE 195
             T E
Sbjct: 224 TLTFE 227

[Close]

BLAST of Lsi06G006650 vs. NCBI nr
Match: gi|694188379|gb|AIS71930.1| (23 kDa jasmonate-induced protein [Citrullus lanatus])

HSP 1 Score: 250.4 bits (638), Expect = 2.6e-63
Identity = 118/196 (60.20%), Postives = 141/196 (71.94%), Query Frame = 1


Query: 1   MHEYHVKTITRQDRAHVALNWKHVEHKYEKARDYVRKLKRQWGTGVSTLYLIYNATGDTI 60
           M +Y  K ITR+DRAHVALN K+ + K + AR+YV +LK+QWGTGVSTL LIYNATGDTI
Sbjct: 18  MPDYEGKKITRRDRAHVALNMKNAQDKDKNAREYVERLKQQWGTGVSTLCLIYNATGDTI 77

Query: 61  TYACDHDWHGHVGPGPYPTEIENGQWGGVLHVKTVGVPCSSSGAVVYHGLNNDDAHCDWM 120
            +  +H WHGH+GPGPYP EI NGQWGG LHVKT G    SS A VY GLNND   CDWM
Sbjct: 78  KFVVEHSWHGHIGPGPYPIEIANGQWGGFLHVKTSGTATGSSAACVYRGLNNDGVVCDWM 137

Query: 121 ASWSNSWNRDFWNNTVYTEIHEKWHYHGNSHWNDISNALDNLGVNHSNEWNGCVSKMVTE 180
            +WSN WNR   +NT YTEI E+ HY  N HWN ISN L + G++ S++WN CVS + T 
Sbjct: 138 LAWSNPWNRSSSDNTAYTEIREEGHYTKNDHWNYISNLLYDSGLSSSDKWNKCVSNVTTG 197

Query: 181 KSTSLLLEAIFTLENA 197
             TS + E I TL++A
Sbjct: 198 SDTSPIFEGILTLQDA 213

[Close]

BLAST of Lsi06G006650 vs. NCBI nr
Match: gi|659086035|ref|XP_008443732.1| (PREDICTED: 23 kDa jasmonate-induced protein-like [Cucumis melo])

HSP 1 Score: 237.3 bits (604), Expect = 2.3e-59
Identity = 112/195 (57.44%), Postives = 137/195 (70.26%), Query Frame = 1


Query: 1   MHEYHVKTITRQDRAHVALNWKHVEHKYEKARDYVRKLKRQWGTGVSTLYLIYNATGDTI 60
           M EY  KTITR+DRA+VA N K+ ++K   ARD+V KL+ +WG GV+TL LIYNATGDTI
Sbjct: 18  MPEYEGKTITRRDRAYVAFNMKNAQNKDRSARDHVEKLREEWGHGVATLCLIYNATGDTI 77

Query: 61  TYACDHDWHGHVGPGPYPTEIENGQWGGVLHVKTVGVPCSSSGAVVYHGLNNDDAHCDWM 120
           T+ C+H WHGH+G GPYP+EI NGQWG  LHVKT  VP  S+GA VY GLNN    CDWM
Sbjct: 78  TFVCEHSWHGHIGSGPYPSEIANGQWGAFLHVKTAVVPSGSAGACVYRGLNNYGEVCDWM 137

Query: 121 ASWSNSWNRDFWNNTVYTEIHEKWHYHGNSHWNDISNALDNLGVNHSNEWNGCVSKMVTE 180
            +WSN + R F +NT YTEI EK HY  + HW  I + L+N  + HS+EWN C SK+ T 
Sbjct: 138 VAWSNPYYRLFADNTAYTEIREKGHYEAHDHWEYIFDLLNNSSLIHSDEWNKCQSKVSTG 197

Query: 181 KSTSLLLEAIFTLEN 196
             T+ + E I TL N
Sbjct: 198 NDTNPIFEGILTLSN 212

[Close]

BLAST of Lsi06G006650 vs. NCBI nr
Match: gi|743780066|ref|XP_010920410.1| (PREDICTED: 23 kDa jasmonate-induced protein-like [Elaeis guineensis])

HSP 1 Score: 216.1 bits (549), Expect = 5.5e-53
Identity = 107/195 (54.87%), Postives = 128/195 (65.64%), Query Frame = 1


Query: 3   EYHVK-TITRQDRAHVALNWKHVEHKYEKARDYVRKLKRQWGTGVSTLYLIYNATGDTIT 62
           EY  K  IT  DRA VALN K+  +K   AR +V  LK ++G GVSTL L+YNATG T+ 
Sbjct: 20  EYKDKPVITATDRATVALNMKNAGNKDVNARKFVENLKERYGNGVSTLCLVYNATGGTLN 79

Query: 63  YACDHDWHGHVGPGPYPTEIENGQWGGVLHVKTVGVPCSSSGAVVYHGLNNDDAHCDWMA 122
           +   HDWHGH+G  PYP +I+NGQWG  LHV T G    SS AVVY G N     CDWM 
Sbjct: 80  FVLSHDWHGHIGESPYPQQIDNGQWGAYLHVHTSGAAVGSSAAVVYRGKNEGGTTCDWMF 139

Query: 123 SWSNSWNRDFWNNTVYTEIHEKWHYHGNSHWNDISNALDNLGVNHSNEWNGCVSKMVTEK 182
            WSN WNR   +NTVYTEI E  HY  N+HWN I + ++  G+ HS+ WNGCVS + T  
Sbjct: 140 GWSNPWNRWGNDNTVYTEIREYRHYEDNNHWNYIQDKVEGSGLTHSDTWNGCVSTVATGS 199

Query: 183 STSLLLEAIFTLENA 197
           STS +L+AI TLENA
Sbjct: 200 STSPILQAILTLENA 214

[Close]

BLAST of Lsi06G006650 vs. NCBI nr
Match: gi|700211516|gb|KGN66612.1| (hypothetical protein Csa_1G642550 [Cucumis sativus])

HSP 1 Score: 213.4 bits (542), Expect = 3.6e-52
Identity = 102/194 (52.58%), Postives = 137/194 (70.62%), Query Frame = 1


Query: 1   MHEYHVKTITRQDRAHVALNWKHVEHKYEKARDYVRKLKRQWGTGVSTLYLIYNATGDTI 60
           M +Y  K ITR+DRA+VALN K+ + K + A+DYV KL+ +WG+GV+TL LIYNATGDTI
Sbjct: 18  MPDYEGKVITRRDRAYVALNMKNAQGKDKDAQDYVEKLREEWGSGVATLCLIYNATGDTI 77

Query: 61  TYACDHDWHGHVGPGPYPTEIENGQWGGVLHVKTVGVPCSSSGAVVYHGLNNDDAHCDWM 120
            + C++ WHGH+GP PYP+EIENGQWG  LHVKT  VP  S+ + VY G NN+   CDWM
Sbjct: 78  KFVCEYSWHGHIGPSPYPSEIENGQWGAFLHVKTAVVPSGSAASCVYRGQNNNGQLCDWM 137

Query: 121 ASWSNSWNRDFWNNTVYTEIHEKWHYHG-NSHWNDISNALDNLGVNHSNEWNGCVSKMVT 180
            +WSN ++R F +N  YTEI E+ HY   + +W  I + L++L  +H ++WNGC+S + T
Sbjct: 138 VAWSNPYHRLFADNKAYTEIREQGHYEAPHDYWEYIFSLLNDL--SHRDKWNGCLSNVST 197

Query: 181 EKSTSLLLEAIFTL 194
              T+ L   IFTL
Sbjct: 198 GSDTNPLCVGIFTL 209

[Close]

BLAST of Lsi06G006650 vs. NCBI nr
Match: gi|1009173940|ref|XP_015868084.1| (PREDICTED: 23 kDa jasmonate-induced protein-like [Ziziphus jujuba])

HSP 1 Score: 204.1 bits (518), Expect = 2.2e-49
Identity = 101/189 (53.44%), Postives = 122/189 (64.55%), Query Frame = 1


Query: 7   KTITRQDRAHVALNWKHVEHKYEKARDYVRKLKRQWGTGVSTLYLIYNATGDTITYACDH 66
           +TIT  DRA VAL +K+ E K   A  YV KLK  +G GVSTL LIYNATGD +T+   H
Sbjct: 25  ETITATDRAQVALQYKNTEDKDTDALTYVDKLKNSYGNGVSTLCLIYNATGDALTFINSH 84

Query: 67  DWHGHVGPGPYPTEIENGQWGGVLHVKTVGVPCSSSGAVVYHGLNNDDAHCDWMASWSNS 126
           DW+GH+G  PYP+ +ENGQWG  LHV   G    S  A VY G N D   CDWM SW+N 
Sbjct: 85  DWYGHIGDAPYPSRLENGQWGAYLHVHDSGAASGSVAATVYRGKNGDGDECDWMISWNNP 144

Query: 127 WNRDFWNNTVYTEIHEKWHYHGNSHWNDISNALDNLGVNHSNEWNGCVSKMVTEKSTSLL 186
           WNR F+NNTVYTEI E  HY  N +W  I + L + G+ + + WNGC S + T  STS  
Sbjct: 145 WNRWFFNNTVYTEIREAHHYE-NDYWGYIYDKLKDCGLVNHDTWNGCYSTVTTGSSTSPK 204

Query: 187 LEAIFTLEN 196
           LEA+ TLE+
Sbjct: 205 LEAVLTLES 212

The following BLAST results are available for this feature:

BLAST of Lsi06G006650 vs. Swiss-Prot


Match Name	E-value	Identity	Description
JI23_HORVU	5.2e-27	37.84	23 kDa jasmonate-induced protein OS=Hordeum vulgare PE=2 SV=1	[more]

BLAST of Lsi06G006650 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A097BU21_CITLA	1.8e-63	60.20	23 kDa jasmonate-induced protein OS=Citrullus lanatus PE=2 SV=1	[more]
A0A0A0M0F4_CUCSA	2.5e-52	52.58	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G642550 PE=4 SV=1	[more]
M5XVI7_PRUPE	4.6e-38	48.66	Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa022968mg PE=4 S...	[more]
M5X699_PRUPE	1.3e-37	47.72	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa020548mg PE=4 SV=1	[more]
M0T1C5_MUSAM	7.3e-36	44.86	Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1	[more]

BLAST of Lsi06G006650 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of Lsi06G006650 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|694188379\|gb\|AIS71930.1\|	2.6e-63	60.20	23 kDa jasmonate-induced protein [Citrullus lanatus]	[more]
gi\|659086035\|ref\|XP_008443732.1\|	2.3e-59	57.44	PREDICTED: 23 kDa jasmonate-induced protein-like [Cucumis melo]	[more]
gi\|743780066\|ref\|XP_010920410.1\|	5.5e-53	54.87	PREDICTED: 23 kDa jasmonate-induced protein-like [Elaeis guineensis]	[more]
gi\|700211516\|gb\|KGN66612.1\|	3.6e-52	52.58	hypothetical protein Csa_1G642550 [Cucumis sativus]	[more]
gi\|1009173940\|ref\|XP_015868084.1\|	2.2e-49	53.44	PREDICTED: 23 kDa jasmonate-induced protein-like [Ziziphus jujuba]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi06G006650.1	Lsi06G006650.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36482	FAMILY NOT NAMED	coord: 3..195 score: 1.7
None	No IPR available	PANTHER	PTHR36482:SF2	SUBFAMILY NOT NAMED	coord: 3..195 score: 1.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi06G006650	ClCG03G010090	Watermelon (Charleston Gray)	lsiwcgB361
Lsi06G006650	Bhi02G001068	Wax gourd	lsiwgoB511
Lsi06G006650	Bhi02G001137	Wax gourd	lsiwgoB521

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi06G006650	Melon (DHL92) v3.6.1	lsimedB420
Lsi06G006650	Silver-seed gourd	carlsiB485
Lsi06G006650	Silver-seed gourd	carlsiB886
Lsi06G006650	Cucumber (Chinese Long) v3	cuclsiB068
Lsi06G006650	Cucumber (Gy14) v1	cgylsiB573
Lsi06G006650	Cucurbita maxima (Rimu)	cmalsiB073
Lsi06G006650	Cucurbita maxima (Rimu)	cmalsiB128
Lsi06G006650	Cucurbita moschata (Rifu)	cmolsiB059
Lsi06G006650	Cucurbita moschata (Rifu)	cmolsiB118
Lsi06G006650	Cucurbita pepo (Zucchini)	cpelsiB017
Lsi06G006650	Cucurbita pepo (Zucchini)	cpelsiB299
Lsi06G006650	Wild cucumber (PI 183967)	cpilsiB059
Lsi06G006650	Cucumber (Chinese Long) v2	culsiB058
Lsi06G006650	Melon (DHL92) v3.5.1	lsimeB398
Lsi06G006650	Cucumber (Gy14) v2	cgyblsiB055