Lsi06G006000 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi06G006000
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionTubulin beta-5 chain
Locationchr06 : 8222185 .. 8226750 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AATTTTCCCACTAAGATAAACTACAAATCAAATCTTCATATGGGCTTTAAATTTTCCTTTTTCCTTTTTGAGTTGCACTCAAATTTTCATAGTTGAAATTTACCCATCAAACAACCAACAATCTTCAAATTCAACAAAACCAGGCCAAGATTTGACCTTCCACCCTTTGATGCAAAATCCTTACCGCTCGAACTTCCATTAAATTCTTATATAAACCACCATCACTCTCACTTCTCAATTCACTCTCTTCTCCACTCCCAATCACCTGACTTGCCTCCCAATCACCTGACTTGCCTCCTACTCCACCGCCAGGTTCCGCCCTCTCCCGCCGGAACCCGCCCCATTTTGCCCTGTATCGCCGGAACCTCTCCGGTAAGTTTCAATTCTTCAGATCTGATTACCGCATTTGATTACTTGCTTGTATTAGATGTGGAAATTTTCATATCGGTGTTTTTTCGAACTGGGTTTTGCTTTATTGTCATATTCTTGCAACAAAATGTCATGAATCTGTTATTTGATCGGGTTTTTTGGAAATCGTTCTAGCTTTATGGTTATATTCTGGCACTGAAATGTCATGAATCTGTGATTTGGTTGAATTTCACTTCCGATCCAATGTTTATGATGATATTGACATGTATTCATTCAATGCAGAGGAGTTGTGTTTCGATTTCTTACTGATCTCATCTTGTTGATCTTGAATTTTTAATACTTGTGCGTGTGTGTTGTCTAATTTCGATACCAATTTAACTATGTGCTTAACTTCAGAGTGTTCTTGCGAGCAGTGAGAAGATGAGGGAGATTCTCCACGTTCAAGGAGGTCAGTGTGGTAACCAGATCGGATCCAAGTTTTGGGAAGTTTTGTGTGAGGAACATGGCATAGATCCGACTGGTCGATACACTGGAACCTCTGATTTGCAACTTGAACGTGTAAATGTGTACTACAATGAGGCTTCTTGCGGGCGTTATGTCCCTCGAGCCGTGCTCATGGATCTCGAGCCTGGTACCATGGACAGTGTGAGGACGGGTCCTTATGGACAAATCTTCAGGCCTGATAATTTCGTTTTTGGGCAATCTGGTGCTGGTAATAACTGGGCCAAGGGGCATTACACCGAAGGAGCAGAACTCATTGATGCTGTCCTTGACGTCGTGAGAAAGGAAGCCGAGAATTGTGATTGCCTTCAAGGTATAATCTATGTCTCAAATCATGTGTTTGATTAGATGTGATTGCTTGGATCTAATGAGAAGTGTTTAAGTTGAGGCCTTTAGATTTACAATTAGTCGTTTTGCTAATGTACCCTTTACTTTTATTTTTGGATGTTCATGTGGGATGAGATTTTAAGACATGATTGAGAGTGTCAAACAATGGATCCAATATCAAAATGCCTTTTTACTCCCACGTGCCTTGCATCTTTGTTTGAGTTATATACTTATAGTATAAAATATTATTAAACTCATTCAAATACTATGGTCTCTTCAATGAAACAACTTCCAAAAGTGCCAAAAAGTATGTTAACGTCTTCTTTTGCTACTTTACCTTTTGCTTTAATACTGTTTTCAAAAAAGTGTACTTGGGTATGTGTCCAAGTGTTAAGCACTTCTGAGCACATCTTCTTCATGGCCTTGCTTTGTTGTAAGGAAAGGTCAAGCCAAAGTCAACGAGGTCCATAGTTATTAATTAATTAATTAATTTGGTACACAAGAAGACGAATTTTTCTTCATTTTCTTACATCTAAGATCTGAAAACTTGTTCTTCTTTATTGATGAGAAGTCACTACATAATCAGGTCTTTCACGATAAGTCACTTTCTTGGTCGGCTCGTTTGGATTCTACTAGTCTTCTTGTATCCACTTGGTGTTCTCTATTCAAGGCTTTTTCAAATTATTCTATTTAGAATATTAGTTTGAATTGGAACACTTTTATTTATTCGGTTTAAGCTTTTTGTATCTTATTTCTTATCATGTTTTTTTACATTTTGAGCCATAGACTCTTTTCATTATATCAATGAAAGGTATTCTTTGGATTATTTCATTCATCAATAAAATATTTCTTATTCCAGAAAATTATATCAATGAAAGGTCATGTTTCCTTTCAGAAAACAAAAAAGAAAAAAAAAGATGGGAAGTCACTACAAATCGATACCTGTTTTCTTTATGTCATTTGTTTTTGTCTCAACTTTATTGAGAAGTCATAGCTTGCGTTTTGCGCCATTCATACTCGAGAATTTCTGTTACATAGAAAATATTACAGTTTCTTATCATGGGATTTCTGATTCATTAAGTGTTTTTAACTCAGTTTGGTTGCTTGGCATTTTTTTTGTGTCCTCACAGGTTTCCAAGTGTGCCATTCACTTGGTGGAGGCACTGGTTCTGGAATGGGGACTCTTTTGATATCCAAAATCAGAGAAGAATATCCGGACAGGATGTTGCTTACTTTCTCTGTCTTCCCTTCGCCAAAAGTGTCGGATACAGTTGTAGAACCGTACAATGCTACACTTTCCGTTCACCAGCTCGTTGAGAATGCAGATGAGTGCATGGTGCTGGACAATGAAGCATTATATGATATTTGCTTCAGGACTCTTAAGTTAACTACTCCTAGCTGTAAGTAAGGAGTTGATTCAGTATTTCAACCCGCTCTTATCTAAGTTGATGATTTAAGCCATGTTTGATAACGATTTCATTTTTCGTTTTCTGTTTTTGAAATTTATGTTTGTTTCCTTCCAAATTTTCAATTACGGTTTTCATTTTTGTTAAATAAACACTTGAGTTTTAGTCAAACATCTAAAAAAACACACTTGTTTTCTAAAACTATTTCTTTTAGTTTTCAAAATTTGGCTTGGTTTTTGAAAATATTCGTAGACTATGTATAACAAAACATAGAAACTTATGAATGAAAATAGTGTTTATAAGTTTAATTTTTAAAATCCAACACGAAAAATCAAATGGGGCCTTAGTTATTAAAATTCATGAAGACACATACCAATTGAAGTCAATCTTATAATGGCCATTCTAAGATGATGAAAGTATCTCCAATGTTTTTAGGTTCCCCTGTGAAAATTTAACTTCCTAACCTCTAAATTTAACTGCAAATAGATAACTTTATCTGTCATTCTATAATGTCCAATAATCTTACCTGAAACTTCAGATTAGAGCTGCACCTTATTTTACAATATACACTGGAACTTTCTGCTCCATTATATTTTTTCTCTTTCAAATAGAGATTTGCAAATGGCTACATGTTAAATGAGTTGTAAGATATGTCCATTAATTAAAAAATATGTTATTAATGTATCAAGCATTGCCAATAAAACTTCTCACAGCTCTTAGCAAAGCACAGGGCTATGCTTCATTTCACTCCTACGTACCCTTGAAAAGTGGTAACTAAATCTGTTTTGTTTTTGACTTCTTTGCTCTTGAAACAGTTGGGGATCTCAACCATTTAATTTCTGCTACAATGAGTGGGGTGACCTGCTGTCTCAGATTTCCTGGCCAGCTTAACTCCGACCTCAGAAAACTTGCTGTCAATCTAATTCCCTTCCCTCGTTTACACTTCTTCATGGTCGGATTTGCTCCTCTTACTTCACGTGGGTCACAGCTATATAGGGCGCTGACCGTCCCAGAGTTGACACAGCAAATGTGGGATTCTAAAAACATGATGTGCGCTGCAGATCCACGGCATGGCCGATACCTCACTGCCTCTGCCATGTTCAGGGGCAAGATGAGTACTAAAGAAGTTGATGAACAAATGATCAATGTTCAGAACAAGAATTCCTCATACTTCGTGGAGTGGATTCCAAACAATGTTAAATCCAGCGTTTGTGACATTGCTCCTAAAGGACTTTCCATGGCATCGACCTTCATCGGAAACTCAACCTCCATTCAGGAAATGTTCAGGCGTGTGAGCGAGCAGTTCACAGCCATGTTCAGGAGGAAGGCTTTCTTGCACTGGTACACTGGAGAAGGAATGGATGAAATGGAGTTCACTGAAGCAGAAAGCAACATGAACGATCTCGTTTCCGAGTATCAGCAGTACCAGGATGCCACAGCTGATGAGGAGTATTACGACGAGGAAGAGGAAGACCCTGAACAGGAGTAACTTCACTTACCTGTGAGTAATCTATAGTGTATGATGCCTGCCTATATATATATCTCCCTCTCTCTCTATATATATATGTGGTATTAGTGTTTAGCACAATTTCTGTGCTTCCTGTGGGTGTTTCCCTTTTTTCTTCTCATGTGTTGTTTCAGTATGCTGTTTTATTTGTAATGTTAGAGTTATCCCATCTTCACATTGTAGTTGAAGTTGTCAAGTAATGGGGAGAAATGAGGAGTATTTGTGTTTGTATGAGTTTTCACTTCAGGATTATCGATTGATTGTTTCACGATTACGTGCTTCATTCTTCAAGATTATGGTCTCAGCTTATTTTAAACTAACCACGAAACGAATTTTCATAGGGTTATAACTCTCACACTATAACCAAAACTCTTACAAAGGGGCAGAGCTATCGAGGAGGCTGGTAATTGCTCCCTTCTTAGCTTGTCTTAGGTTATATCGCTAAACTAGCCTATG

mRNA sequence

AATTTTCCCACTAAGATAAACTACAAATCAAATCTTCATATGGGCTTTAAATTTTCCTTTTTCCTTTTTGAGTTGCACTCAAATTTTCATAGTTGAAATTTACCCATCAAACAACCAACAATCTTCAAATTCAACAAAACCAGGCCAAGATTTGACCTTCCACCCTTTGATGCAAAATCCTTACCGCTCGAACTTCCATTAAATTCTTATATAAACCACCATCACTCTCACTTCTCAATTCACTCTCTTCTCCACTCCCAATCACCTGACTTGCCTCCCAATCACCTGACTTGCCTCCTACTCCACCGCCAGGTTCCGCCCTCTCCCGCCGGAACCCGCCCCATTTTGCCCTGTATCGCCGGAACCTCTCCGAGTGTTCTTGCGAGCAGTGAGAAGATGAGGGAGATTCTCCACGTTCAAGGAGGTCAGTGTGGTAACCAGATCGGATCCAAGTTTTGGGAAGTTTTGTGTGAGGAACATGGCATAGATCCGACTGGTCGATACACTGGAACCTCTGATTTGCAACTTGAACGTGTAAATGTGTACTACAATGAGGCTTCTTGCGGGCGTTATGTCCCTCGAGCCGTGCTCATGGATCTCGAGCCTGGTACCATGGACAGTGTGAGGACGGGTCCTTATGGACAAATCTTCAGGCCTGATAATTTCGTTTTTGGGCAATCTGGTGCTGGTAATAACTGGGCCAAGGGGCATTACACCGAAGGAGCAGAACTCATTGATGCTGTCCTTGACGTCGTGAGAAAGGAAGCCGAGAATTGTGATTGCCTTCAAGGTTTCCAAGTGTGCCATTCACTTGGTGGAGGCACTGGTTCTGGAATGGGGACTCTTTTGATATCCAAAATCAGAGAAGAATATCCGGACAGGATGTTGCTTACTTTCTCTGTCTTCCCTTCGCCAAAAGTGTCGGATACAGTTGTAGAACCGTACAATGCTACACTTTCCGTTCACCAGCTCGTTGAGAATGCAGATGAGTGCATGGTGCTGGACAATGAAGCATTATATGATATTTGCTTCAGGACTCTTAAGTTAACTACTCCTAGCTTTGGGGATCTCAACCATTTAATTTCTGCTACAATGAGTGGGGTGACCTGCTGTCTCAGATTTCCTGGCCAGCTTAACTCCGACCTCAGAAAACTTGCTGTCAATCTAATTCCCTTCCCTCGTTTACACTTCTTCATGGTCGGATTTGCTCCTCTTACTTCACGTGGGTCACAGCTATATAGGGCGCTGACCGTCCCAGAGTTGACACAGCAAATGTGGGATTCTAAAAACATGATGTGCGCTGCAGATCCACGGCATGGCCGATACCTCACTGCCTCTGCCATGTTCAGGGGCAAGATGAGTACTAAAGAAGTTGATGAACAAATGATCAATGTTCAGAACAAGAATTCCTCATACTTCGTGGAGTGGATTCCAAACAATGTTAAATCCAGCGTTTGTGACATTGCTCCTAAAGGACTTTCCATGGCATCGACCTTCATCGGAAACTCAACCTCCATTCAGGAAATGTTCAGGCGTGTGAGCGAGCAGTTCACAGCCATGTTCAGGAGGAAGGCTTTCTTGCACTGGTACACTGGAGAAGGAATGGATGAAATGGAGTTCACTGAAGCAGAAAGCAACATGAACGATCTCGTTTCCGAGTATCAGCAGTACCAGGATGCCACAGCTGATGAGGAGTATTACGACGAGGAAGAGGAAGACCCTGAACAGGAGTAACTTCACTTACCTGGTTATAACTCTCACACTATAACCAAAACTCTTACAAAGGGGCAGAGCTATCGAGGAGGCTGGTAATTGCTCCCTTCTTAGCTTGTCTTAGGTTATATCGCTAAACTAGCCTATG

Coding sequence (CDS)

ATGAGGGAGATTCTCCACGTTCAAGGAGGTCAGTGTGGTAACCAGATCGGATCCAAGTTTTGGGAAGTTTTGTGTGAGGAACATGGCATAGATCCGACTGGTCGATACACTGGAACCTCTGATTTGCAACTTGAACGTGTAAATGTGTACTACAATGAGGCTTCTTGCGGGCGTTATGTCCCTCGAGCCGTGCTCATGGATCTCGAGCCTGGTACCATGGACAGTGTGAGGACGGGTCCTTATGGACAAATCTTCAGGCCTGATAATTTCGTTTTTGGGCAATCTGGTGCTGGTAATAACTGGGCCAAGGGGCATTACACCGAAGGAGCAGAACTCATTGATGCTGTCCTTGACGTCGTGAGAAAGGAAGCCGAGAATTGTGATTGCCTTCAAGGTTTCCAAGTGTGCCATTCACTTGGTGGAGGCACTGGTTCTGGAATGGGGACTCTTTTGATATCCAAAATCAGAGAAGAATATCCGGACAGGATGTTGCTTACTTTCTCTGTCTTCCCTTCGCCAAAAGTGTCGGATACAGTTGTAGAACCGTACAATGCTACACTTTCCGTTCACCAGCTCGTTGAGAATGCAGATGAGTGCATGGTGCTGGACAATGAAGCATTATATGATATTTGCTTCAGGACTCTTAAGTTAACTACTCCTAGCTTTGGGGATCTCAACCATTTAATTTCTGCTACAATGAGTGGGGTGACCTGCTGTCTCAGATTTCCTGGCCAGCTTAACTCCGACCTCAGAAAACTTGCTGTCAATCTAATTCCCTTCCCTCGTTTACACTTCTTCATGGTCGGATTTGCTCCTCTTACTTCACGTGGGTCACAGCTATATAGGGCGCTGACCGTCCCAGAGTTGACACAGCAAATGTGGGATTCTAAAAACATGATGTGCGCTGCAGATCCACGGCATGGCCGATACCTCACTGCCTCTGCCATGTTCAGGGGCAAGATGAGTACTAAAGAAGTTGATGAACAAATGATCAATGTTCAGAACAAGAATTCCTCATACTTCGTGGAGTGGATTCCAAACAATGTTAAATCCAGCGTTTGTGACATTGCTCCTAAAGGACTTTCCATGGCATCGACCTTCATCGGAAACTCAACCTCCATTCAGGAAATGTTCAGGCGTGTGAGCGAGCAGTTCACAGCCATGTTCAGGAGGAAGGCTTTCTTGCACTGGTACACTGGAGAAGGAATGGATGAAATGGAGTTCACTGAAGCAGAAAGCAACATGAACGATCTCGTTTCCGAGTATCAGCAGTACCAGGATGCCACAGCTGATGAGGAGTATTACGACGAGGAAGAGGAAGACCCTGAACAGGAGTAA

Protein sequence

MREILHVQGGQCGNQIGSKFWEVLCEEHGIDPTGRYTGTSDLQLERVNVYYNEASCGRYVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMLLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQLYRALTVPELTQQMWDSKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAPKGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATADEEYYDEEEEDPEQE
Homology
[Close]
BLAST of Lsi06G006000 vs. Swiss-Prot
Match: TBB6_ARATH (Tubulin beta-6 chain OS=Arabidopsis thaliana GN=TUBB6 PE=2 SV=1)

HSP 1 Score: 882.5 bits (2279), Expect = 2.0e-255
Identity = 428/444 (96.40%), Postives = 437/444 (98.42%), Query Frame = 1 

Query: 1   MREILHVQGGQCGNQIGSKFWEVLCEEHGIDPTGRYTGTSDLQLERVNVYYNEASCGRYV 60
           MREILH+QGGQCGNQIGSKFWEV+C+EHGIDPTGRY G SDLQLERVNVYYNEASCGRYV
Sbjct: 1   MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGNSDLQLERVNVYYNEASCGRYV 60

Query: 61  PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV 120
           PRA+LMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV
Sbjct: 61  PRAILMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMLLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRM+LTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240

Query: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQLYRALTVPELTQQMWDSKNMM 300
           RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQ YRALTVPELTQQMWDSKNMM
Sbjct: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDSKNMM 300

Query: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAPKG 360
           CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAP+G
Sbjct: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAPRG 360

Query: 361 LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
           LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361 LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 421 EYQQYQDATADEEYYDEEEEDPEQ 445
           EYQQYQDATAD+E   EE+ED E+
Sbjct: 421 EYQQYQDATADDEGEYEEDEDEEE 444

[Close]
BLAST of Lsi06G006000 vs. Swiss-Prot
Match: TBB6_MAIZE (Tubulin beta-6 chain OS=Zea mays GN=TUBB6 PE=2 SV=1)

HSP 1 Score: 882.5 bits (2279), Expect = 2.0e-255
Identity = 425/440 (96.59%), Postives = 436/440 (99.09%), Query Frame = 1 

Query: 1   MREILHVQGGQCGNQIGSKFWEVLCEEHGIDPTGRYTGTSDLQLERVNVYYNEASCGRYV 60
           MREILH+QGGQCGNQIG+KFWEV+C+EHGIDPTGRYTG SDLQLERVNVYYNEASCGR+V
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVVCDEHGIDPTGRYTGNSDLQLERVNVYYNEASCGRFV 60

Query: 61  PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV 120
           PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELID+VLDVV
Sbjct: 61  PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMLLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRM+LTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240

Query: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQLYRALTVPELTQQMWDSKNMM 300
           RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQ YRALTVPELTQQMWD+KNMM
Sbjct: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMM 300

Query: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAPKG 360
           CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDI P+G
Sbjct: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRG 360

Query: 361 LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
           LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361 LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 421 EYQQYQDATADEEYYDEEEE 441
           EYQQYQDATADEE Y++EEE
Sbjct: 421 EYQQYQDATADEEEYEDEEE 440

[Close]
BLAST of Lsi06G006000 vs. Swiss-Prot
Match: TBB1_ORYSJ (Tubulin beta-1 chain OS=Oryza sativa subsp. japonica GN=TUBB1 PE=2 SV=2)

HSP 1 Score: 882.1 bits (2278), Expect = 2.6e-255
Identity = 430/447 (96.20%), Postives = 439/447 (98.21%), Query Frame = 1 

Query: 1   MREILHVQGGQCGNQIGSKFWEVLCEEHGIDPTGRYTGTSDLQLERVNVYYNEASCGRYV 60
           MREILH+QGGQCGNQIGSKFWEV+C+EHGIDPTGRY GTSDLQLERVNVYYNEASCGR+V
Sbjct: 1   MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGTSDLQLERVNVYYNEASCGRFV 60

Query: 61  PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV 120
           PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELID+VLDVV
Sbjct: 61  PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMLLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRM+LTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240

Query: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQLYRALTVPELTQQMWDSKNMM 300
           RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQ YRALTVPELTQQMWD+KNMM
Sbjct: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMM 300

Query: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAPKG 360
           CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDI P+G
Sbjct: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRG 360

Query: 361 LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
           LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361 LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 421 EYQQYQDATADEE--YYDEEEEDPEQE 446
           EYQQYQDATADEE  Y DEEE+ PE E
Sbjct: 421 EYQQYQDATADEEGDYEDEEEQVPEDE 447

[Close]
BLAST of Lsi06G006000 vs. Swiss-Prot
Match: TBB1_WHEAT (Tubulin beta-1 chain OS=Triticum aestivum GN=TUBB1 PE=2 SV=1)

HSP 1 Score: 881.7 bits (2277), Expect = 3.3e-255
Identity = 429/445 (96.40%), Postives = 438/445 (98.43%), Query Frame = 1 

Query: 1   MREILHVQGGQCGNQIGSKFWEVLCEEHGIDPTGRYTGTSDLQLERVNVYYNEASCGRYV 60
           MREILH+QGGQCGNQIGSKFWEV+C+EHGIDPTGRY GTSDLQLERVNVYYNEASCGR+V
Sbjct: 1   MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGTSDLQLERVNVYYNEASCGRFV 60

Query: 61  PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV 120
           PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELID+VLDVV
Sbjct: 61  PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMLLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRM+LTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240

Query: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQLYRALTVPELTQQMWDSKNMM 300
           RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQ+YR LTVPELTQQMWDSKNMM
Sbjct: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQMYRPLTVPELTQQMWDSKNMM 300

Query: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAPKG 360
           CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDI P+G
Sbjct: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRG 360

Query: 361 LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
           LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361 LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 421 EYQQYQDATADEEYYDEEEEDPEQE 446
           EYQQYQDATADEE   EEEE+ EQE
Sbjct: 421 EYQQYQDATADEEGEYEEEEELEQE 445

[Close]
BLAST of Lsi06G006000 vs. Swiss-Prot
Match: TBB5_WHEAT (Tubulin beta-5 chain OS=Triticum aestivum GN=TUBB5 PE=2 SV=1)

HSP 1 Score: 879.0 bits (2270), Expect = 2.2e-254
Identity = 426/447 (95.30%), Postives = 440/447 (98.43%), Query Frame = 1 

Query: 1   MREILHVQGGQCGNQIGSKFWEVLCEEHGIDPTGRYTGTSDLQLERVNVYYNEASCGRYV 60
           MREILH+QGGQCGNQIGSKFWEV+C+EHGIDPTGRY GTSDLQLERVNVYYNEASCGR+V
Sbjct: 1   MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGTSDLQLERVNVYYNEASCGRFV 60

Query: 61  PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV 120
           PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELID+VLDVV
Sbjct: 61  PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMLLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRM+LTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240

Query: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQLYRALTVPELTQQMWDSKNMM 300
           RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQ+YR+LTVPELTQQMWDSKNMM
Sbjct: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQMYRSLTVPELTQQMWDSKNMM 300

Query: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAPKG 360
           CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAP+G
Sbjct: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAPRG 360

Query: 361 LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
           LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV+
Sbjct: 361 LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVA 420

Query: 421 EYQQYQDATADEE---YYDEEEEDPEQ 445
           EYQQYQDATADEE   Y DE++ D ++
Sbjct: 421 EYQQYQDATADEEEELYEDEDDADLQE 447

[Close]
BLAST of Lsi06G006000 vs. TrEMBL
Match: A0A0A0LXT7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G629200 PE=3 SV=1)

HSP 1 Score: 894.4 bits (2310), Expect = 5.5e-257
Identity = 441/447 (98.66%), Postives = 443/447 (99.11%), Query Frame = 1 

Query: 1   MREILHVQGGQCGNQIGSKFWEVLCEEHGIDPTGRYTGTSDLQLERVNVYYNEASCGRYV 60
           MREILHVQGGQCGNQIGSKFWEVLC+EHGIDPTGRYTGTSDLQLERVNVYYNEASCGRYV
Sbjct: 1   MREILHVQGGQCGNQIGSKFWEVLCDEHGIDPTGRYTGTSDLQLERVNVYYNEASCGRYV 60

Query: 61  PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV 120
           PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMLLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMLLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMLLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240

Query: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQLYRALTVPELTQQMWDSKNMM 300
           RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQLYRALTVPELTQQMWDSKNMM
Sbjct: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQLYRALTVPELTQQMWDSKNMM 300

Query: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAPKG 360
           CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAPKG
Sbjct: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAPKG 360

Query: 361 LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
           LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361 LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 421 EYQQYQDATA-DEEY-YDEEEEDPEQE 446
           EYQQYQDATA DEEY Y+EEEE PE E
Sbjct: 421 EYQQYQDATADDEEYNYEEEEEIPEHE 447

[Close]
BLAST of Lsi06G006000 vs. TrEMBL
Match: A0A097CPK2_LINUS (Beta-tubulin 6b OS=Linum usitatissimum GN=TUB_6b PE=2 SV=1)

HSP 1 Score: 885.6 bits (2287), Expect = 2.6e-254
Identity = 430/444 (96.85%), Postives = 439/444 (98.87%), Query Frame = 1 

Query: 1   MREILHVQGGQCGNQIGSKFWEVLCEEHGIDPTGRYTGTSDLQLERVNVYYNEASCGRYV 60
           MREILH+QGGQCGNQIGSKFWEV+C+EHGIDPTGRYTGT+D+QLERVNVYYNEASCGRYV
Sbjct: 1   MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYTGTTDVQLERVNVYYNEASCGRYV 60

Query: 61  PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV 120
           PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMLLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRM+LTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240

Query: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQLYRALTVPELTQQMWDSKNMM 300
           RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQ YRALTVPELTQQMWDSKNMM
Sbjct: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDSKNMM 300

Query: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAPKG 360
           CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCD+ P+G
Sbjct: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDVPPRG 360

Query: 361 LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
           LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361 LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 421 EYQQYQDATADEEY-YDEEEEDPE 444
           EYQQYQDATADEE  YDEEEE+ E
Sbjct: 421 EYQQYQDATADEELDYDEEEEEEE 444

[Close]
BLAST of Lsi06G006000 vs. TrEMBL
Match: K7UNP2_MAIZE (Uncharacterized protein (Fragment) OS=Zea mays GN=magi9825 PE=3 SV=1)

HSP 1 Score: 885.2 bits (2286), Expect = 3.4e-254
Identity = 427/441 (96.83%), Postives = 437/441 (99.09%), Query Frame = 1 

Query: 1   MREILHVQGGQCGNQIGSKFWEVLCEEHGIDPTGRYTGTSDLQLERVNVYYNEASCGRYV 60
           MREILH+QGGQCGNQIGSKFWEV+C+EHGIDPTGRY GTSDLQLERVNVYYNEASCGR+V
Sbjct: 1   MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGTSDLQLERVNVYYNEASCGRFV 60

Query: 61  PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV 120
           PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELID+VLDVV
Sbjct: 61  PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMLLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRM+LTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240

Query: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQLYRALTVPELTQQMWDSKNMM 300
           RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQ YRALTVPELTQQMWD+KNMM
Sbjct: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMM 300

Query: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAPKG 360
           CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDI P+G
Sbjct: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRG 360

Query: 361 LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
           LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361 LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 421 EYQQYQDATADEEYYDEEEED 442
           EYQQYQDATADEE Y++EEED
Sbjct: 421 EYQQYQDATADEEEYEDEEED 441

[Close]
BLAST of Lsi06G006000 vs. TrEMBL
Match: A7KQH4_EUCGR (Beta-tubulin OS=Eucalyptus grandis GN=TUB5 PE=2 SV=1)

HSP 1 Score: 884.8 bits (2285), Expect = 4.4e-254
Identity = 430/445 (96.63%), Postives = 439/445 (98.65%), Query Frame = 1 

Query: 1   MREILHVQGGQCGNQIGSKFWEVLCEEHGIDPTGRYTGTSDLQLERVNVYYNEASCGRYV 60
           MREILHVQGGQCGNQIGSKFWEV+C+EHGIDPTGRYTGTSDLQLERVNVYYNEASCGR+V
Sbjct: 1   MREILHVQGGQCGNQIGSKFWEVVCDEHGIDPTGRYTGTSDLQLERVNVYYNEASCGRFV 60

Query: 61  PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV 120
           PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMLLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQ+CHSLGGGTGSGMGTLLISKIREEYPDRM+LTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQICHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240

Query: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQLYRALTVPELTQQMWDSKNMM 300
           RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQ YRALTVPELTQQMWD+KNMM
Sbjct: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMM 300

Query: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAPKG 360
           CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDI P+G
Sbjct: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRG 360

Query: 361 LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
           LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361 LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 421 EYQQYQDATADEEYYDEEEEDPEQE 446
           EYQQYQDATADEE   E+EED EQ+
Sbjct: 421 EYQQYQDATADEELEYEDEEDAEQD 445

[Close]
BLAST of Lsi06G006000 vs. TrEMBL
Match: A0A0D3EG04_BRAOL (Uncharacterized protein (Fragment) OS=Brassica oleracea var. oleracea GN=TUB6 PE=3 SV=1)

HSP 1 Score: 884.4 bits (2284), Expect = 5.7e-254
Identity = 431/445 (96.85%), Postives = 438/445 (98.43%), Query Frame = 1 

Query: 1   MREILHVQGGQCGNQIGSKFWEVLCEEHGIDPTGRYTGTSDLQLERVNVYYNEASCGRYV 60
           MREILH+QGGQCGNQIGSKFWEV+C+EHGIDPTGRYTG SDLQLERVNVYYNEASCGRYV
Sbjct: 37  MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYTGNSDLQLERVNVYYNEASCGRYV 96

Query: 61  PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV 120
           PRA+LMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV
Sbjct: 97  PRAILMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV 156

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMLLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRM+LTFSVFPSPKVSDTVV
Sbjct: 157 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 216

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL
Sbjct: 217 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 276

Query: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQLYRALTVPELTQQMWDSKNMM 300
           RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQ YRALTVPELTQQMWDSKNMM
Sbjct: 277 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDSKNMM 336

Query: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAPKG 360
           CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAP+G
Sbjct: 337 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAPRG 396

Query: 361 LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
           LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 397 LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 456

Query: 421 EYQQYQDATADEEYYDEEEEDPEQE 446
           EYQQYQDATADEE   EEEE+ E E
Sbjct: 457 EYQQYQDATADEEGEYEEEEEEEVE 481

[Close]
BLAST of Lsi06G006000 vs. TAIR10
Match: AT5G12250.1 (AT5G12250.1 beta-6 tubulin)

HSP 1 Score: 882.5 bits (2279), Expect = 1.1e-256
Identity = 428/444 (96.40%), Postives = 437/444 (98.42%), Query Frame = 1 

Query: 1   MREILHVQGGQCGNQIGSKFWEVLCEEHGIDPTGRYTGTSDLQLERVNVYYNEASCGRYV 60
           MREILH+QGGQCGNQIGSKFWEV+C+EHGIDPTGRY G SDLQLERVNVYYNEASCGRYV
Sbjct: 1   MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGNSDLQLERVNVYYNEASCGRYV 60

Query: 61  PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV 120
           PRA+LMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV
Sbjct: 61  PRAILMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMLLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRM+LTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240

Query: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQLYRALTVPELTQQMWDSKNMM 300
           RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQ YRALTVPELTQQMWDSKNMM
Sbjct: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDSKNMM 300

Query: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAPKG 360
           CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAP+G
Sbjct: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAPRG 360

Query: 361 LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
           LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361 LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 421 EYQQYQDATADEEYYDEEEEDPEQ 445
           EYQQYQDATAD+E   EE+ED E+
Sbjct: 421 EYQQYQDATADDEGEYEEDEDEEE 444

[Close]
BLAST of Lsi06G006000 vs. TAIR10
Match: AT5G62700.1 (AT5G62700.1 tubulin beta chain 3)

HSP 1 Score: 867.1 bits (2239), Expect = 4.8e-252
Identity = 421/447 (94.18%), Postives = 435/447 (97.32%), Query Frame = 1 

Query: 1   MREILHVQGGQCGNQIGSKFWEVLCEEHGIDPTGRYTGTSDLQLERVNVYYNEASCGRYV 60
           MREILH+QGGQCGNQIG+KFWEV+C EHGIDPTGRYTG SDLQLER+NVYYNEASCGR+V
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60

Query: 61  PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV 120
           PRAVLMDLEPGTMDS+R+GPYGQ FRPDNFVFGQSGAGNNWAKGHYTEGAELID+VLDVV
Sbjct: 61  PRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMLLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRM+LTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240

Query: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQLYRALTVPELTQQMWDSKNMM 300
           RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQ YR+LTVPELTQQMWDSKNMM
Sbjct: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTVPELTQQMWDSKNMM 300

Query: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAPKG 360
           CAADPRHGRYLTASAMFRGKMSTKEVDEQM+NVQNKNSSYFVEWIPNNVKS+VCDI P G
Sbjct: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPTG 360

Query: 361 LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
           L MASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361 LKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 421 EYQQYQDATADEE--YYDEEEEDPEQE 446
           EYQQYQDATADEE  Y DEEE + +QE
Sbjct: 421 EYQQYQDATADEEGDYEDEEEGEYQQE 447

[Close]
BLAST of Lsi06G006000 vs. TAIR10
Match: AT5G62690.1 (AT5G62690.1 tubulin beta chain 2)

HSP 1 Score: 867.1 bits (2239), Expect = 4.8e-252
Identity = 421/447 (94.18%), Postives = 435/447 (97.32%), Query Frame = 1 

Query: 1   MREILHVQGGQCGNQIGSKFWEVLCEEHGIDPTGRYTGTSDLQLERVNVYYNEASCGRYV 60
           MREILH+QGGQCGNQIG+KFWEV+C EHGIDPTGRYTG SDLQLER+NVYYNEASCGR+V
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60

Query: 61  PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV 120
           PRAVLMDLEPGTMDS+R+GPYGQ FRPDNFVFGQSGAGNNWAKGHYTEGAELID+VLDVV
Sbjct: 61  PRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMLLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRM+LTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240

Query: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQLYRALTVPELTQQMWDSKNMM 300
           RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQ YR+LTVPELTQQMWDSKNMM
Sbjct: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTVPELTQQMWDSKNMM 300

Query: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAPKG 360
           CAADPRHGRYLTASAMFRGKMSTKEVDEQM+NVQNKNSSYFVEWIPNNVKS+VCDI P G
Sbjct: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPTG 360

Query: 361 LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
           L MASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361 LKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 421 EYQQYQDATADEE--YYDEEEEDPEQE 446
           EYQQYQDATADEE  Y DEEE + +QE
Sbjct: 421 EYQQYQDATADEEGDYEDEEEGEYQQE 447

[Close]
BLAST of Lsi06G006000 vs. TAIR10
Match: AT5G23860.1 (AT5G23860.1 tubulin beta 8)

HSP 1 Score: 860.9 bits (2223), Expect = 3.4e-250
Identity = 419/448 (93.53%), Postives = 434/448 (96.88%), Query Frame = 1 

Query: 1   MREILHVQGGQCGNQIGSKFWEVLCEEHGIDPTGRYTGTSDLQLERVNVYYNEASCGRYV 60
           MREILH+QGGQCGNQIG+KFWEV+C EHGID TGRY G +DLQLERVNVYYNEASCGR+V
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGENDLQLERVNVYYNEASCGRFV 60

Query: 61  PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV 120
           PRAVLMDLEPGTMDSVR+GPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELID+VLDVV
Sbjct: 61  PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMLLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRM+LTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240

Query: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQLYRALTVPELTQQMWDSKNMM 300
           RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQ YRALTVPELTQQMWD+KNMM
Sbjct: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMM 300

Query: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAPKG 360
           CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKS+VCDI P G
Sbjct: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIPPTG 360

Query: 361 LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
           L MASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361 LKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 421 EYQQYQDATADEE---YYDEEEEDPEQE 446
           EYQQYQDATADEE    Y+E+E + ++E
Sbjct: 421 EYQQYQDATADEEEGYEYEEDEVEVQEE 448

[Close]
BLAST of Lsi06G006000 vs. TAIR10
Match: AT2G29550.1 (AT2G29550.1 tubulin beta-7 chain)

HSP 1 Score: 857.1 bits (2213), Expect = 5.0e-249
Identity = 419/446 (93.95%), Postives = 432/446 (96.86%), Query Frame = 1 

Query: 1   MREILHVQGGQCGNQIGSKFWEVLCEEHGIDPTGRYTGTSDLQLERVNVYYNEASCGRYV 60
           MREILH+QGGQCGNQIGSKFWEV+  EHGID TGRY G S+LQLERVNVYYNEASCGRYV
Sbjct: 1   MREILHIQGGQCGNQIGSKFWEVVNLEHGIDQTGRYVGDSELQLERVNVYYNEASCGRYV 60

Query: 61  PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV 120
           PRAVLMDLEPGTMDSVR+GPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELID+VLDVV
Sbjct: 61  PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMLLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRM++TFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL+TPSFGDLNHLISATMSGVTCCL
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCCL 240

Query: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQLYRALTVPELTQQMWDSKNMM 300
           RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQ YR LTVPELTQQMWD+KNMM
Sbjct: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRNLTVPELTQQMWDAKNMM 300

Query: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAPKG 360
           CAADPRHGRYLTASAMFRGKMSTKEVDEQM+NVQNKNSSYFVEWIPNNVKS+VCDI P G
Sbjct: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPTG 360

Query: 361 LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
           L MASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361 LKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 421 EYQQYQDATADEE-YYDEEEEDPEQE 446
           EYQQYQDATADEE  Y+EEE + EQE
Sbjct: 421 EYQQYQDATADEEGEYEEEEAEYEQE 446

[Close]
BLAST of Lsi06G006000 vs. NCBI nr
Match: gi|449442596|ref|XP_004139067.1| (PREDICTED: tubulin beta-6 chain [Cucumis sativus])

HSP 1 Score: 894.4 bits (2310), Expect = 7.9e-257
Identity = 441/447 (98.66%), Postives = 443/447 (99.11%), Query Frame = 1 

Query: 1   MREILHVQGGQCGNQIGSKFWEVLCEEHGIDPTGRYTGTSDLQLERVNVYYNEASCGRYV 60
           MREILHVQGGQCGNQIGSKFWEVLC+EHGIDPTGRYTGTSDLQLERVNVYYNEASCGRYV
Sbjct: 1   MREILHVQGGQCGNQIGSKFWEVLCDEHGIDPTGRYTGTSDLQLERVNVYYNEASCGRYV 60

Query: 61  PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV 120
           PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMLLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMLLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMLLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240

Query: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQLYRALTVPELTQQMWDSKNMM 300
           RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQLYRALTVPELTQQMWDSKNMM
Sbjct: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQLYRALTVPELTQQMWDSKNMM 300

Query: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAPKG 360
           CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAPKG
Sbjct: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAPKG 360

Query: 361 LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
           LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361 LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 421 EYQQYQDATA-DEEY-YDEEEEDPEQE 446
           EYQQYQDATA DEEY Y+EEEE PE E
Sbjct: 421 EYQQYQDATADDEEYNYEEEEEIPEHE 447

[Close]
BLAST of Lsi06G006000 vs. NCBI nr
Match: gi|659098849|ref|XP_008450322.1| (PREDICTED: tubulin beta-6 chain [Cucumis melo])

HSP 1 Score: 891.7 bits (2303), Expect = 5.1e-256
Identity = 439/447 (98.21%), Postives = 443/447 (99.11%), Query Frame = 1 

Query: 1   MREILHVQGGQCGNQIGSKFWEVLCEEHGIDPTGRYTGTSDLQLERVNVYYNEASCGRYV 60
           MREILHVQGGQCGNQIGSKFWEVLC+EHGIDPTGRYTGTSDLQLERVNVYYNEASCGRYV
Sbjct: 1   MREILHVQGGQCGNQIGSKFWEVLCDEHGIDPTGRYTGTSDLQLERVNVYYNEASCGRYV 60

Query: 61  PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV 120
           PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMLLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMLLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMLLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240

Query: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQLYRALTVPELTQQMWDSKNMM 300
           RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQLYRALTVPELTQQMWDSKNMM
Sbjct: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQLYRALTVPELTQQMWDSKNMM 300

Query: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAPKG 360
           CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAPKG
Sbjct: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAPKG 360

Query: 361 LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
           LS+ASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361 LSIASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 421 EYQQYQDATA-DEEY-YDEEEEDPEQE 446
           EYQQYQDATA D+EY Y+EEEE PE E
Sbjct: 421 EYQQYQDATADDDEYNYEEEEEIPEHE 447

[Close]
BLAST of Lsi06G006000 vs. NCBI nr
Match: gi|695032563|ref|XP_009403832.1| (PREDICTED: tubulin beta-1 chain-like [Musa acuminata subsp. malaccensis])

HSP 1 Score: 885.6 bits (2287), Expect = 3.7e-254
Identity = 432/446 (96.86%), Postives = 441/446 (98.88%), Query Frame = 1 

Query: 1   MREILHVQGGQCGNQIGSKFWEVLCEEHGIDPTGRYTGTSDLQLERVNVYYNEASCGRYV 60
           MREILHVQGGQCGNQIGSKFWEV+C+EHGIDPTG+YTGTSDLQLERVNVYYNEASCGRYV
Sbjct: 1   MREILHVQGGQCGNQIGSKFWEVVCDEHGIDPTGQYTGTSDLQLERVNVYYNEASCGRYV 60

Query: 61  PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV 120
           PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELID+VLDVV
Sbjct: 61  PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMLLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMLLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMLLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240

Query: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQLYRALTVPELTQQMWDSKNMM 300
           RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQ YRALTVPELTQQMWD+KNMM
Sbjct: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMM 300

Query: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAPKG 360
           CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDI P+G
Sbjct: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRG 360

Query: 361 LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
           LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361 LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 421 EYQQYQDATAD-EEYYDEEEEDPEQE 446
           EYQQYQDATAD EEYY++EEE+  QE
Sbjct: 421 EYQQYQDATADEEEYYEDEEEEVPQE 446

[Close]
BLAST of Lsi06G006000 vs. NCBI nr
Match: gi|695101954|gb|AIS84173.1| (beta-tubulin 6b [Linum usitatissimum])

HSP 1 Score: 885.6 bits (2287), Expect = 3.7e-254
Identity = 430/444 (96.85%), Postives = 439/444 (98.87%), Query Frame = 1 

Query: 1   MREILHVQGGQCGNQIGSKFWEVLCEEHGIDPTGRYTGTSDLQLERVNVYYNEASCGRYV 60
           MREILH+QGGQCGNQIGSKFWEV+C+EHGIDPTGRYTGT+D+QLERVNVYYNEASCGRYV
Sbjct: 1   MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYTGTTDVQLERVNVYYNEASCGRYV 60

Query: 61  PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV 120
           PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMLLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRM+LTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240

Query: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQLYRALTVPELTQQMWDSKNMM 300
           RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQ YRALTVPELTQQMWDSKNMM
Sbjct: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDSKNMM 300

Query: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAPKG 360
           CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCD+ P+G
Sbjct: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDVPPRG 360

Query: 361 LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
           LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361 LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 421 EYQQYQDATADEEY-YDEEEEDPE 444
           EYQQYQDATADEE  YDEEEE+ E
Sbjct: 421 EYQQYQDATADEELDYDEEEEEEE 444

[Close]
BLAST of Lsi06G006000 vs. NCBI nr
Match: gi|413946855|gb|AFW79504.1| (hypothetical protein ZEAMMB73_908177, partial [Zea mays])

HSP 1 Score: 885.2 bits (2286), Expect = 4.8e-254
Identity = 427/441 (96.83%), Postives = 437/441 (99.09%), Query Frame = 1 

Query: 1   MREILHVQGGQCGNQIGSKFWEVLCEEHGIDPTGRYTGTSDLQLERVNVYYNEASCGRYV 60
           MREILH+QGGQCGNQIGSKFWEV+C+EHGIDPTGRY GTSDLQLERVNVYYNEASCGR+V
Sbjct: 1   MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGTSDLQLERVNVYYNEASCGRFV 60

Query: 61  PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV 120
           PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELID+VLDVV
Sbjct: 61  PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMLLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRM+LTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240

Query: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQLYRALTVPELTQQMWDSKNMM 300
           RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQ YRALTVPELTQQMWD+KNMM
Sbjct: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMM 300

Query: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAPKG 360
           CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDI P+G
Sbjct: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRG 360

Query: 361 LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
           LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361 LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 421 EYQQYQDATADEEYYDEEEED 442
           EYQQYQDATADEE Y++EEED
Sbjct: 421 EYQQYQDATADEEEYEDEEED 441

The following BLAST results are available for this feature:
BLAST of Lsi06G006000 vs. Swiss-Prot
Match NameE-valueIdentityDescription
TBB6_ARATH2.0e-25596.40Tubulin beta-6 chain OS=Arabidopsis thaliana GN=TUBB6 PE=2 SV=1[more]
TBB6_MAIZE2.0e-25596.59Tubulin beta-6 chain OS=Zea mays GN=TUBB6 PE=2 SV=1[more]
TBB1_ORYSJ2.6e-25596.20Tubulin beta-1 chain OS=Oryza sativa subsp. japonica GN=TUBB1 PE=2 SV=2[more]
TBB1_WHEAT3.3e-25596.40Tubulin beta-1 chain OS=Triticum aestivum GN=TUBB1 PE=2 SV=1[more]
TBB5_WHEAT2.2e-25495.30Tubulin beta-5 chain OS=Triticum aestivum GN=TUBB5 PE=2 SV=1[more]
BLAST of Lsi06G006000 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LXT7_CUCSA5.5e-25798.66Uncharacterized protein OS=Cucumis sativus GN=Csa_1G629200 PE=3 SV=1[more]
A0A097CPK2_LINUS2.6e-25496.85Beta-tubulin 6b OS=Linum usitatissimum GN=TUB_6b PE=2 SV=1[more]
K7UNP2_MAIZE3.4e-25496.83Uncharacterized protein (Fragment) OS=Zea mays GN=magi9825 PE=3 SV=1[more]
A7KQH4_EUCGR4.4e-25496.63Beta-tubulin OS=Eucalyptus grandis GN=TUB5 PE=2 SV=1[more]
A0A0D3EG04_BRAOL5.7e-25496.85Uncharacterized protein (Fragment) OS=Brassica oleracea var. oleracea GN=TUB6 PE... [more]
BLAST of Lsi06G006000 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G12250.11.1e-25696.40 beta-6 tubulin[more]
AT5G62700.14.8e-25294.18 tubulin beta chain 3[more]
AT5G62690.14.8e-25294.18 tubulin beta chain 2[more]
AT5G23860.13.4e-25093.53 tubulin beta 8[more]
AT2G29550.15.0e-24993.95 tubulin beta-7 chain[more]
BLAST of Lsi06G006000 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449442596|ref|XP_004139067.1|7.9e-25798.66PREDICTED: tubulin beta-6 chain [Cucumis sativus][more]
gi|659098849|ref|XP_008450322.1|5.1e-25698.21PREDICTED: tubulin beta-6 chain [Cucumis melo][more]
gi|695032563|ref|XP_009403832.1|3.7e-25496.86PREDICTED: tubulin beta-1 chain-like [Musa acuminata subsp. malaccensis][more]
gi|695101954|gb|AIS84173.1|3.7e-25496.85beta-tubulin 6b [Linum usitatissimum][more]
gi|413946855|gb|AFW79504.1|4.8e-25496.83hypothetical protein ZEAMMB73_908177, partial [Zea mays][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003924GTPase activity
GO:0005525GTP binding
GO:0005200structural constituent of cytoskeleton
Vocabulary: Biological Process
TermDefinition
GO:0007017microtubule-based process
Vocabulary: Cellular Component
TermDefinition
GO:0005874microtubule
Vocabulary: INTERPRO
TermDefinition
IPR023123Tubulin_C
IPR018316Tubulin/FtsZ_2-layer-sand-dom
IPR017975Tubulin_CS
IPR013838Beta-tubulin_BS
IPR008280Tub_FtsZ_C
IPR003008Tubulin_FtsZ_GTPase
IPR002453Beta_tubulin
IPR000217Tubulin
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007017 microtubule-based process
biological_process GO:0009740 gibberellic acid mediated signaling pathway
biological_process GO:0008152 metabolic process
biological_process GO:0006833 water transport
biological_process GO:0016126 sterol biosynthetic process
biological_process GO:0010162 seed dormancy process
biological_process GO:0048767 root hair elongation
biological_process GO:0009266 response to temperature stimulus
biological_process GO:0046686 response to cadmium ion
biological_process GO:0010498 proteasomal protein catabolic process
biological_process GO:0000271 polysaccharide biosynthetic process
biological_process GO:0009825 multidimensional cell growth
biological_process GO:0006972 hyperosmotic response
biological_process GO:0007030 Golgi organization
biological_process GO:0006096 glycolytic process
biological_process GO:0006094 gluconeogenesis
biological_process GO:0007010 cytoskeleton organization
biological_process GO:0051258 protein polymerization
biological_process GO:0006084 acetyl-CoA metabolic process
biological_process GO:0009409 response to cold
biological_process GO:0009651 response to salt stress
biological_process GO:0019344 cysteine biosynthetic process
biological_process GO:0007018 microtubule-based movement
biological_process GO:0043481 anthocyanin accumulation in tissues in response to UV light
biological_process GO:0016132 brassinosteroid biosynthetic process
biological_process GO:0009932 cell tip growth
biological_process GO:0071555 cell wall organization
cellular_component GO:0043234 protein complex
cellular_component GO:0005886 plasma membrane
cellular_component GO:0005874 microtubule
cellular_component GO:0005737 cytoplasm
cellular_component GO:0009536 plastid
molecular_function GO:0005200 structural constituent of cytoskeleton
molecular_function GO:0005525 GTP binding
molecular_function GO:0003924 GTPase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi06G006000.1Lsi06G006000.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000217TubulinPRINTSPR01161TUBULINcoord: 10..30
score: 3.0E-105coord: 132..150
score: 3.0E-105coord: 93..104
score: 3.0E-105coord: 151..172
score: 3.0E-105coord: 190..210
score: 3.0E-105coord: 176..189
score: 3.0E-105coord: 370..398
score: 3.0E-105coord: 51..70
score: 3.0E-105coord: 106..130
score: 3.0E
IPR000217TubulinPANTHERPTHR11588TUBULINcoord: 5..442
score:
IPR002453Beta tubulinPRINTSPR01163BETATUBULINcoord: 265..281
score: 3.1E-119coord: 412..430
score: 3.1E-119coord: 212..224
score: 3.1E-119coord: 329..343
score: 3.1E-119coord: 245..258
score: 3.1E-119coord: 347..370
score: 3.1E-119coord: 41..58
score: 3.1E-119coord: 230..239
score: 3.1E-119coord: 88..99
score: 3.1E-119coord: 108..126
score: 3.1E-119coord: 311..329
score: 3.1E-119coord: 377..388
score: 3.1E-119coord: 152..164
score: 3.1E
IPR003008Tubulin/FtsZ, GTPase domainGENE3DG3DSA:3.40.50.1440coord: 1..263
score: 1.0E
IPR003008Tubulin/FtsZ, GTPase domainPFAMPF00091Tubulincoord: 3..211
score: 3.0
IPR003008Tubulin/FtsZ, GTPase domainSMARTSM00864Tubulin_4coord: 47..244
score: 1.8
IPR003008Tubulin/FtsZ, GTPase domainunknownSSF52490Tubulin nucleotide-binding domain-likecoord: 1..243
score: 3.14E
IPR008280Tubulin/FtsZ, C-terminalunknownSSF55307Tubulin C-terminal domain-likecoord: 244..429
score: 2.08
IPR013838Beta tubulin, autoregulation binding sitePROSITEPS00228TUBULIN_B_AUTOREGcoord: 1..4
scor
IPR017975Tubulin, conserved sitePROSITEPS00227TUBULINcoord: 140..146
scor
IPR018316Tubulin/FtsZ, 2-layer sandwich domainGENE3DG3DSA:3.30.1330.20coord: 264..373
score: 2.7
IPR018316Tubulin/FtsZ, 2-layer sandwich domainPFAMPF03953Tubulin_Ccoord: 261..381
score: 7.1
IPR018316Tubulin/FtsZ, 2-layer sandwich domainSMARTSM00865Tubulin_C_4coord: 246..383
score: 2.6
IPR023123Tubulin, C-terminalGENE3DG3DSA:1.10.287.600coord: 374..430
score: 1.5
NoneNo IPR availableunknownCoilCoilcoord: 408..428
scor
NoneNo IPR availablePANTHERPTHR11588:SF106TUBULIN BETA-6 CHAINcoord: 5..442
score: