Lsi06G003740 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi06G003740
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Haloacid dehalogenase-like hydrolase superfamily protein
Location	chr06 : 4139503 .. 4142528 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTAAATCGTAGAGGCTCCTTCAATCAAATACTGTACTATGCTCGATTTCCTTTAATGGCGGCTGCTCATTCCTTGACGCAAAATCTTCGATCGTCTCATTTTCATATGCAATCGCATCGTCCTTCTCAACCATTGCTATTTGAACGGTGTTGTGGATTACCCATTACTGGAGAGCTTGTTCTTCGTAGTTTTCCAGCAAATAGATGCACTCGATTTGGTCTCAAAGCTTGTGTTCAATCCCCCAAAGATAATTACAGTAACAGCTCTTTGGGGATCAATGCTAAGGGCCCAACACTTGCCCATCGTCCACAGCTGCTTAACAATGTCGATATTGATTTAGTTGATGGAATTGATCGCAGATATTCTACTACCGTTCATGAGGAGCCCCAATGGGGAAAAAATCCTTTAACTTTTCATGATTTCTCTTCCAGGGACAAACTTGTTGTTGCTGTTGACATCGATGAGGGTTTGTCTTTTTTTTCTCCTTCCCTGGATTTTCATTTCTGTTTCTCTGACCTTCTCCACTGTAAAGCTGCTTCTTCTTCCTCTGAATTCTCTGTTTACAAGGGGGTTTGATGTTCTGTGACAGAGACAGGAAAAATCCAATATTGTAGGATGATGTAAACTAAGTGACTAAATTTATGGAATGGTTGACTTAGATTAATTAATTAATTTATTCATTGACGACTTAGATAAATTAGATTTGAGCTACACTTCATTAGCTAATGACTTTGCATGTGCTATATTCTCTTAGTACTCTGATCGAATGCTTGTTTCTTTTTGTTGTGTAGTTTTAGGAAACTTTGTCTCGGCTCTAAACAAGTTTGTTGCTGATCGTTATTCTTCAAATCATTCTGTTTCGGAGTATCATGTCTATGAATTCTTCAGGGTATTATTATGTTTCTTTGTCTTATTTTTGGGGTTTCCTTTTGATTATTAACGTCTGGGGAACGTCTAATATGCATCAGTTTGATTTAGGCTTTCGTTTCTGTTTCAGATATGGAAGTGCTCTCGTGATGAAGGTACAACTTTTGGTGATTGACTTTTAACTCACTTGTCATTTGATCAAGATGGCTTTATAATTATATAATGCTTATTGTTTTTCCTGAGTGGAGTCGTGTATTTGACTGATTGATGGTTGCATGTGGTTCTGAGATCTTTATTTATTTCTTTTTTCTTTTTTGAAAATATTTTTTACTATTTCCAAGCTTTCCATGTTGAATGAGTCTGATATTGTAGGTTTGCTAGCACCACATTTTGTATTAGGAAGCATAAGCGTCAAGTGGTTGGTTTCATGACCTTTTCTTAGTTGAATAATTGGACCTTGCAGCAATTTTTTTAATGTCTTTGAGTTTCCGGGCCTGTTTGTGTGCACTATTGCTGTTCTTACATTTGTGTTATTGCATGTGTTTTACAAAATACGATCTTGTAGTTTGTTCTTGATGGTTCTCGTGGAAAAATATACTTTGGGAAAATTACTAATTTTTTAGTGAGAGTTTCAAAAGCAAAATGGTTTGAGATCATGTCATCAATGTGCTCAAAGTATGCGTCTTCTTTTGGGTTATGTAATTGACTTTAATAAAAAGGTTTAGATTTTAGCATAGAAAAGGTATTTGTATACCAATGGCTTCTAAAGATTTTTGCTTATAGAAGGTATTTTGTGGTAAACTTTATTTGGTTTAACGCTTTTGTCTAATCTTGGCTATTGAATTTAGCTTTTGCACCTTGTACTTTTAGCAAACAATTCAATGTAAAATGAACGATTTGCTTTATTTTATTTTTTATTTTTTTGAGTGATATGAAGTCTGTAATTGTGTGCTGATGGCAAAGGTTTTTGTTTGTTGGTTAATCTTGCGATCTATAAATTTCAGGCTCAAAATTGTATGACACTCATGTAAATTTGCACTTCTTTGAGTGTACTTTGCAGTCTAAATGAAATACAATGCGTGATTTTTACACATGGAGAACTCTGGACTGATTTTATATTTTATTTTTACGCTCTTGAAGCTGTTTTTGAGACATTTCTGTCCATGGAAACTGTCTCAACTTGGTTGGTTGATTGGTTCTGATAATTGTTTCCCTTCTTTCCAGCTAATATTCGAGTTCACGAGTTCTTCAAGACACCATATTTCAAGACTGGAATCTGGCCTATACCCGGAGCTCAGAGCACGCTCCTCAAGTTATCAAGATTCTGTCACCTATCAGTCGTAACGTATGTATAGCTACATTGGATCATTTTGATATGGTACCAATTCCTTCCACTAGACGTTGAACTGATCTCATTTGAACTAATTTTAGGTCTCGACAAAATGCGATCAAAGAACACACGCTTGAGTGGATCGAGAAGCACTATCCAGGACTGTTTCAGGAGATTCACTTTGGAAACCACTTTGCTCTAGATGGAGAATCCAGATCAAAGGCAGAAATATGCAAGTATGTCAACGAATTATTACACATTTACCATTTTTTTTCTCATCAAGTAAAACAACGCTCACTAATGAGTTGCTTTTAAATTTTTGTGGCGTCATGGGCGGTCTTACCGAGCAGGTCGTTGGGAGCAAGCGTGCTAATAGATGATAACCCAAGATATGCAATTGAATGCGCTGAAGCGGGGATTCGAGTTCTACTTTTCGACTACGAGAATTCGTATCCATGGTGCAAGACTGAATGCGAGGATCTGCCTCCCTTAGTCTCTAAAGTTCACAATTGGGAAGAAGTGGAGAAGCAATTAGCTTCTTGTGTTCTTTCTTCTTAAAGCAATTAGTTTTTAGCAAAATAGGAATGCTGTTTTATTTATTAATATGAAATGTGGGATTTTGTGGGTTGGAGGTAGTAGGAACTTAGGAAATGCTGATGATGTAATTTTTTAAGGTTTAGCATTAAACCCAACTTTCATTATCCCTTAATTTAATTTCATCACTTTTCTAACAAAGTGTGTAATGTCTGTCTCTCATTTTGTCTCCTCAATGAGCATATGTTTATTCAAGACTAGAATTCAAATTCAAATTGATGTTTTTGCTCAA

mRNA sequence

ATGTTAAATCGTAGAGGCTCCTTCAATCAAATACTGTACTATGCTCGATTTCCTTTAATGGCGGCTGCTCATTCCTTGACGCAAAATCTTCGATCGTCTCATTTTCATATGCAATCGCATCGTCCTTCTCAACCATTGCTATTTGAACGGTGTTGTGGATTACCCATTACTGGAGAGCTTGTTCTTCGTAGTTTTCCAGCAAATAGATGCACTCGATTTGGTCTCAAAGCTTGTGTTCAATCCCCCAAAGATAATTACAGTAACAGCTCTTTGGGGATCAATGCTAAGGGCCCAACACTTGCCCATCGTCCACAGCTGCTTAACAATGTCGATATTGATTTAGTTGATGGAATTGATCGCAGATATTCTACTACCGTTCATGAGGAGCCCCAATGGGGAAAAAATCCTTTAACTTTTCATGATTTCTCTTCCAGGGACAAACTTGTTGTTGCTGTTGACATCGATGAGGTTTTAGGAAACTTTGTCTCGGCTCTAAACAAGTTTGTTGCTGATCGTTATTCTTCAAATCATTCTGTTTCGGAGTATCATGTCTATGAATTCTTCAGGATATGGAAGTGCTCTCGTGATGAAGCTAATATTCGAGTTCACGAGTTCTTCAAGACACCATATTTCAAGACTGGAATCTGGCCTATACCCGGAGCTCAGAGCACGCTCCTCAAGTTATCAAGATTCTGTCACCTATCAGTCGTAACGTCTCGACAAAATGCGATCAAAGAACACACGCTTGAGTGGATCGAGAAGCACTATCCAGGACTGTTTCAGGAGATTCACTTTGGAAACCACTTTGCTCTAGATGGAGAATCCAGATCAAAGGCAGAAATATGCAAGTCGTTGGGAGCAAGCGTGCTAATAGATGATAACCCAAGATATGCAATTGAATGCGCTGAAGCGGGGATTCGAGTTCTACTTTTCGACTACGAGAATTCGTATCCATGGTGCAAGACTGAATGCGAGGATCTGCCTCCCTTAGTCTCTAAAGTTCACAATTGGGAAGAAGTGGAGAAGCAATTAGCTTCTTGTGTTCTTTCTTCTTAAAGCAATTAGTTTTTAGCAAAATAGGAATGCTGTTTTATTTATTAATATGAAATGTGGGATTTTGTGGGTTGGAGGTAGTAGGAACTTAGGAAATGCTGATGATGTAATTTTTTAAGGTTTAGCATTAAACCCAACTTTCATTATCCCTTAATTTAATTTCATCACTTTTCTAACAAAGTGTGTAATGTCTGTCTCTCATTTTGTCTCCTCAATGAGCATATGTTTATTCAAGACTAGAATTCAAATTCAAATTGATGTTTTTGCTCAA

Coding sequence (CDS)

ATGTTAAATCGTAGAGGCTCCTTCAATCAAATACTGTACTATGCTCGATTTCCTTTAATGGCGGCTGCTCATTCCTTGACGCAAAATCTTCGATCGTCTCATTTTCATATGCAATCGCATCGTCCTTCTCAACCATTGCTATTTGAACGGTGTTGTGGATTACCCATTACTGGAGAGCTTGTTCTTCGTAGTTTTCCAGCAAATAGATGCACTCGATTTGGTCTCAAAGCTTGTGTTCAATCCCCCAAAGATAATTACAGTAACAGCTCTTTGGGGATCAATGCTAAGGGCCCAACACTTGCCCATCGTCCACAGCTGCTTAACAATGTCGATATTGATTTAGTTGATGGAATTGATCGCAGATATTCTACTACCGTTCATGAGGAGCCCCAATGGGGAAAAAATCCTTTAACTTTTCATGATTTCTCTTCCAGGGACAAACTTGTTGTTGCTGTTGACATCGATGAGGTTTTAGGAAACTTTGTCTCGGCTCTAAACAAGTTTGTTGCTGATCGTTATTCTTCAAATCATTCTGTTTCGGAGTATCATGTCTATGAATTCTTCAGGATATGGAAGTGCTCTCGTGATGAAGCTAATATTCGAGTTCACGAGTTCTTCAAGACACCATATTTCAAGACTGGAATCTGGCCTATACCCGGAGCTCAGAGCACGCTCCTCAAGTTATCAAGATTCTGTCACCTATCAGTCGTAACGTCTCGACAAAATGCGATCAAAGAACACACGCTTGAGTGGATCGAGAAGCACTATCCAGGACTGTTTCAGGAGATTCACTTTGGAAACCACTTTGCTCTAGATGGAGAATCCAGATCAAAGGCAGAAATATGCAAGTCGTTGGGAGCAAGCGTGCTAATAGATGATAACCCAAGATATGCAATTGAATGCGCTGAAGCGGGGATTCGAGTTCTACTTTTCGACTACGAGAATTCGTATCCATGGTGCAAGACTGAATGCGAGGATCTGCCTCCCTTAGTCTCTAAAGTTCACAATTGGGAAGAAGTGGAGAAGCAATTAGCTTCTTGTGTTCTTTCTTCTTAA

Protein sequence

MLNRRGSFNQILYYARFPLMAAAHSLTQNLRSSHFHMQSHRPSQPLLFERCCGLPITGELVLRSFPANRCTRFGLKACVQSPKDNYSNSSLGINAKGPTLAHRPQLLNNVDIDLVDGIDRRYSTTVHEEPQWGKNPLTFHDFSSRDKLVVAVDIDEVLGNFVSALNKFVADRYSSNHSVSEYHVYEFFRIWKCSRDEANIRVHEFFKTPYFKTGIWPIPGAQSTLLKLSRFCHLSVVTSRQNAIKEHTLEWIEKHYPGLFQEIHFGNHFALDGESRSKAEICKSLGASVLIDDNPRYAIECAEAGIRVLLFDYENSYPWCKTECEDLPPLVSKVHNWEEVEKQLASCVLSS

Homology

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BLAST of Lsi06G003740 vs. TrEMBL
Match: A0A0A0LX27_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G598340 PE=4 SV=1)

HSP 1 Score: 647.1 bits (1668), Expect = 1.2e-182
Identity = 314/351 (89.46%), Postives = 325/351 (92.59%), Query Frame = 1


Query: 1   MLNRRGSFNQILYYARFPLMAAAHSLTQNLRSSHFHMQSHRPSQPLLFERCCGLPITGEL 60
           MLN R SFNQILYYARFPLMAA +S+TQNLR SHF MQ HR  Q LLFERCCGLPITGEL
Sbjct: 1   MLNCRRSFNQILYYARFPLMAA-YSMTQNLRLSHFDMQPHRAPQQLLFERCCGLPITGEL 60

Query: 61  VLRSFPANRCTRFGLKACVQSPKDNYSNSSLGINAKGPTLAHRPQLLNNVDIDLVDGIDR 120
           VLR F  NRCT F LKAC QSP+DNYSN S G NAKGPTLA RPQLLN+VD +LVDGIDR
Sbjct: 61  VLRGFSGNRCTGFSLKACAQSPQDNYSNGSFGFNAKGPTLARRPQLLNSVD-NLVDGIDR 120

Query: 121 RYSTTVHEEPQWGKNPLTFHDFSSRDKLVVAVDIDEVLGNFVSALNKFVADRYSSNHSVS 180
           R+S++VHEEP+WG NPLTFH+ SSRDKLVVAVDIDEVLGNFVSALNKFVADRYSSNHSVS
Sbjct: 121 RFSSSVHEEPKWG-NPLTFHEISSRDKLVVAVDIDEVLGNFVSALNKFVADRYSSNHSVS 180

Query: 181 EYHVYEFFRIWKCSRDEANIRVHEFFKTPYFKTGIWPIPGAQSTLLKLSRFCHLSVVTSR 240
           EYHVYEFFRIWKCSRDEANIRVHEFFKTPYFKTGIWPIPGAQSTLLKLSRFCHLSVVTSR
Sbjct: 181 EYHVYEFFRIWKCSRDEANIRVHEFFKTPYFKTGIWPIPGAQSTLLKLSRFCHLSVVTSR 240

Query: 241 QNAIKEHTLEWIEKHYPGLFQEIHFGNHFALDGESRSKAEICKSLGASVLIDDNPRYAIE 300
           QNAIKEHTLEWIEKHY GLFQEIHFGNHFALDGESRSKAEICKS GASVLIDDNPRYAIE
Sbjct: 241 QNAIKEHTLEWIEKHYQGLFQEIHFGNHFALDGESRSKAEICKSFGASVLIDDNPRYAIE 300

Query: 301 CAEAGIRVLLFDYENSYPWCKTECEDLPPLVSKVHNWEEVEKQLASCVLSS 352
           CAEAGIRVLLFDYENSYPWCKTEC DLPPLV+KVHNWEEVEKQLASCVL S
Sbjct: 301 CAEAGIRVLLFDYENSYPWCKTECGDLPPLVTKVHNWEEVEKQLASCVLPS 348

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BLAST of Lsi06G003740 vs. TrEMBL
Match: A0A0D2UBP6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_010G094600 PE=4 SV=1)

HSP 1 Score: 379.4 bits (973), Expect = 4.7e-102
Identity = 194/324 (59.88%), Postives = 228/324 (70.37%), Query Frame = 1


Query: 40  HRPSQPLLFERCCGLPITGELV-LRSFPANRCTRFGLKACVQSPKDNYSNSSLGINAKG- 99
           H  + P    RC      G+LV L ++  +RC   G        K N + SSL +  K  
Sbjct: 41  HLHTSPKDQRRC--FQFLGKLVPLENYNVSRCGSGG------GFKFNKAASSLNLTVKSC 100

Query: 100 ----------PTLAHRPQLLNNVDIDLVDGIDRRYSTTVHEEPQWGKNPLTFHDFSSRDK 159
                       LA   QL   ++I   D   +R +T         +  L F D    +K
Sbjct: 101 LNDSPRKWDQKALAFASQLARELEISKHDEPQKRANTVADSRGLSQRGTLDFPDKPLPEK 160

Query: 160 LVVAVDIDEVLGNFVSALNKFVADRYSSNHSVSEYHVYEFFRIWKCSRDEANIRVHEFFK 219
           +VVAVD+DEVLGNFVSALN+F+ADRYS NHSVSEYHVYEFFRIW CSRDEA+IRVHEFFK
Sbjct: 161 IVVAVDVDEVLGNFVSALNRFIADRYSLNHSVSEYHVYEFFRIWNCSRDEADIRVHEFFK 220

Query: 220 TPYFKTGIWPIPGAQSTLLKLSRFCHLSVVTSRQNAIKEHTLEWIEKHYPGLFQEIHFGN 279
           TPYFK GI P+PGAQ  L KLSRFC+LSVVTSRQN IK+HT+EW+EKHYPGLF EIHFGN
Sbjct: 221 TPYFKNGIHPLPGAQRALHKLSRFCNLSVVTSRQNVIKDHTIEWLEKHYPGLFHEIHFGN 280

Query: 280 HFALDGESRSKAEICKSLGASVLIDDNPRYAIECAEAGIRVLLFDYENSYPWCKTECEDL 339
           HFALDGESR K+EIC+ LGA +LIDDNPRYAIECA+ GIRVLLFDYENSYPWCKT+  D 
Sbjct: 281 HFALDGESRPKSEICRLLGAKILIDDNPRYAIECAQVGIRVLLFDYENSYPWCKTQSIDE 340

Query: 340 PPLVSKVHNWEEVEKQLASCVLSS 352
            PLV+KVH+WEEVE+Q+AS ++SS
Sbjct: 341 HPLVTKVHSWEEVEQQIASWIISS 356

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BLAST of Lsi06G003740 vs. TrEMBL
Match: A0A0B0PP69_GOSAR (Putative 5'(3')-deoxyribonucleotidase OS=Gossypium arboreum GN=F383_08015 PE=4 SV=1)

HSP 1 Score: 377.5 bits (968), Expect = 1.8e-101
Identity = 193/324 (59.57%), Postives = 228/324 (70.37%), Query Frame = 1


Query: 40  HRPSQPLLFERCCGLPITGELV-LRSFPANRCTRFGLKACVQSPKDNYSNSSLGINAKG- 99
           H  + P    RC      G+LV L ++  +RC   G        K N + S L +  K  
Sbjct: 41  HLHTSPNDQRRC--FQFLGKLVPLENYNVSRCGSGG------DFKFNKAASGLNLTVKSC 100

Query: 100 ----------PTLAHRPQLLNNVDIDLVDGIDRRYSTTVHEEPQWGKNPLTFHDFSSRDK 159
                       LA   QL + ++I   D   +R +T         +  L F D    +K
Sbjct: 101 LNDSPRKWDQKALAFASQLASELEISKHDEPQKRANTVADSRGLSQRGTLDFPDKPLPEK 160

Query: 160 LVVAVDIDEVLGNFVSALNKFVADRYSSNHSVSEYHVYEFFRIWKCSRDEANIRVHEFFK 219
           +VVAVD+DEVLGNFVSALN+F+ADRYS NHSVSEYHVYEFFRIW CSRDEA+IRVHEFFK
Sbjct: 161 IVVAVDVDEVLGNFVSALNRFIADRYSLNHSVSEYHVYEFFRIWNCSRDEADIRVHEFFK 220

Query: 220 TPYFKTGIWPIPGAQSTLLKLSRFCHLSVVTSRQNAIKEHTLEWIEKHYPGLFQEIHFGN 279
           TPYFK GI P+PGAQ  L KLSRFC+LSVVTSRQN IK+HT+EW+EKHYPGLF EIHFGN
Sbjct: 221 TPYFKNGIHPLPGAQRALHKLSRFCNLSVVTSRQNVIKDHTIEWLEKHYPGLFHEIHFGN 280

Query: 280 HFALDGESRSKAEICKSLGASVLIDDNPRYAIECAEAGIRVLLFDYENSYPWCKTECEDL 339
           HFALDGESR K+EIC+ LGA +LIDDNPRYAIECA+ GIRVLLFDYENSYPWCKT+  D 
Sbjct: 281 HFALDGESRPKSEICRLLGAKILIDDNPRYAIECAQVGIRVLLFDYENSYPWCKTQSIDE 340

Query: 340 PPLVSKVHNWEEVEKQLASCVLSS 352
            PLV+KVH+WEEVE+Q+AS ++SS
Sbjct: 341 HPLVTKVHSWEEVEQQIASWIVSS 356

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BLAST of Lsi06G003740 vs. TrEMBL
Match: F6HGY9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0016g00260 PE=4 SV=1)

HSP 1 Score: 369.8 bits (948), Expect = 3.7e-99
Identity = 186/277 (67.15%), Postives = 215/277 (77.62%), Query Frame = 1


Query: 75  LKACVQSPKDNYSNSSLGINAKGPTLAHRPQLLNNVDIDLVD-GIDRRYSTTVHEEPQWG 134
           ++ C  S K     +  G  A     +++ Q+L + +I L D GI   +  + H     G
Sbjct: 53  MRGCSDSNKRRVDRNGHGAFAH----SYQQQVLRDFEIGLPDAGIPTGHGASHH-----G 112

Query: 135 KNPLTFHDFSSRDKLVVAVDIDEVLGNFVSALNKFVADRYSSNHSVSEYHVYEFFRIWKC 194
           K  L F      +K+VVAVD+DEVLGNFVSALN+F+ADRYS  HSVSEYHVYEFF+IW C
Sbjct: 113 KL-LGFPLRPLPEKIVVAVDVDEVLGNFVSALNRFIADRYSLKHSVSEYHVYEFFKIWNC 172

Query: 195 SRDEANIRVHEFFKTPYFKTGIWPIPGAQSTLLKLSRFCHLSVVTSRQNAIKEHTLEWIE 254
           SRDEA+IRVHEFFKT YFKTGI PIPGAQ  L KLSRFC+LS+VTSRQNAIK+HT+EWIE
Sbjct: 173 SRDEADIRVHEFFKTSYFKTGIHPIPGAQQALHKLSRFCNLSIVTSRQNAIKDHTIEWIE 232

Query: 255 KHYPGLFQEIHFGNHFALDGESRSKAEICKSLGASVLIDDNPRYAIECAEAGIRVLLFDY 314
           KHYPGLFQEIHFGNHFALDGESR K+EIC+SLGA VLIDDNPRYAIECAE GIRVLLFDY
Sbjct: 233 KHYPGLFQEIHFGNHFALDGESRPKSEICRSLGAKVLIDDNPRYAIECAEIGIRVLLFDY 292

Query: 315 ENSYPWCKTECEDLPPLVSKVHNWEEVEKQLASCVLS 351
           ENSYPWCKTE     PLV+KVH+WEEVE+QL S ++S
Sbjct: 293 ENSYPWCKTESVSQHPLVTKVHDWEEVEQQLVSWIVS 319

[Close]

BLAST of Lsi06G003740 vs. TrEMBL
Match: V4UJ58_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10008817mg PE=4 SV=1)

HSP 1 Score: 369.0 bits (946), Expect = 6.4e-99
Identity = 178/275 (64.73%), Postives = 210/275 (76.36%), Query Frame = 1


Query: 75  LKACVQSPKDNYSNSSLGINAKGPTLAHRPQLLNNVDIDLVDGIDRRYSTTVHEEPQWGK 134
           L+ C  S     + +   + A  P     PQ + +++I   +G             + G 
Sbjct: 77  LRGCFDSTNRVNAGADQKVGAFAP-----PQRVPHLEIAAAEGCTDARLVNGRGSSERG- 136

Query: 135 NPLTFHDFSSRDKLVVAVDIDEVLGNFVSALNKFVADRYSSNHSVSEYHVYEFFRIWKCS 194
           NPL F D     K+VVAVD+DEVLGNFVSALN+F+ADRYS NHSVSEYHVYEFF+IW CS
Sbjct: 137 NPLGFFDSHLHGKIVVAVDVDEVLGNFVSALNRFIADRYSLNHSVSEYHVYEFFKIWNCS 196

Query: 195 RDEANIRVHEFFKTPYFKTGIWPIPGAQSTLLKLSRFCHLSVVTSRQNAIKEHTLEWIEK 254
           RDEA++RVHEFFKTPYFKTGI P+PGAQ  L KLSR+C+LSVVTSRQ+ IK+HT+EWIEK
Sbjct: 197 RDEADLRVHEFFKTPYFKTGIHPLPGAQKALHKLSRYCNLSVVTSRQHVIKDHTIEWIEK 256

Query: 255 HYPGLFQEIHFGNHFALDGESRSKAEICKSLGASVLIDDNPRYAIECAEAGIRVLLFDYE 314
           HYPGLFQEIHFGNHFAL G+SR K+EIC+SLGA VLIDDNPRYAIECAE GI+VLLFDYE
Sbjct: 257 HYPGLFQEIHFGNHFALAGKSRPKSEICRSLGAKVLIDDNPRYAIECAEVGIKVLLFDYE 316

Query: 315 NSYPWCKTECEDLPPLVSKVHNWEEVEKQLASCVL 350
           NSYPWCKT+     PLV+KVHNWEEVE+QL S ++
Sbjct: 317 NSYPWCKTDSVHQHPLVTKVHNWEEVEQQLVSWIV 345

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BLAST of Lsi06G003740 vs. TAIR10
Match: AT4G33140.1 (AT4G33140.1 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein)

HSP 1 Score: 344.0 bits (881), Expect = 1.1e-94
Identity = 157/209 (75.12%), Postives = 181/209 (86.60%), Query Frame = 1


Query: 142 FSSRDKLVVAVDIDEVLGNFVSALNKFVADRYSSNHSVSEYHVYEFFRIWKCSRDEANIR 201
           F   DK+VVAVDIDEVLGNFVSALN+F+ADRY SNHSVSEYHVYEFF+IW CSR+EA++R
Sbjct: 143 FQGNDKIVVAVDIDEVLGNFVSALNRFIADRYLSNHSVSEYHVYEFFKIWNCSRNEADLR 202

Query: 202 VHEFFKTPYFKTGIWPIPGAQSTLLKLSRFCHLSVVTSRQNAIKEHTLEWIEKHYPGLFQ 261
           VHEFFKT YFK GI P+PGA  TL KLS++C +SVVTSRQNAIKEHTLEWIE H+PGLF+
Sbjct: 203 VHEFFKTSYFKKGIHPLPGAHKTLHKLSKYCDMSVVTSRQNAIKEHTLEWIEIHFPGLFK 262

Query: 262 EIHFGNHFALDGESRSKAEICKSLGASVLIDDNPRYAIECAEAGIRVLLFDYENSYPWCK 321
           +IHFGNHFAL GESR K+EIC+S GA +LIDDNPRYA ECA  G++VLLFDYENSYPW K
Sbjct: 263 QIHFGNHFALHGESRPKSEICRSFGAEILIDDNPRYAEECANIGMKVLLFDYENSYPWSK 322

Query: 322 TECEDLPPLVSKVHNWEEVEKQLASCVLS 351
           TE  D  PLV++VHNWEEVE+Q+ S  +S
Sbjct: 323 TESVDRHPLVTRVHNWEEVEQQILSLAVS 351

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BLAST of Lsi06G003740 vs. NCBI nr
Match: gi|778663259|ref|XP_011660045.1| (PREDICTED: uncharacterized protein LOC101215456 [Cucumis sativus])

HSP 1 Score: 647.1 bits (1668), Expect = 1.7e-182
Identity = 314/351 (89.46%), Postives = 325/351 (92.59%), Query Frame = 1


Query: 1   MLNRRGSFNQILYYARFPLMAAAHSLTQNLRSSHFHMQSHRPSQPLLFERCCGLPITGEL 60
           MLN R SFNQILYYARFPLMAA +S+TQNLR SHF MQ HR  Q LLFERCCGLPITGEL
Sbjct: 1   MLNCRRSFNQILYYARFPLMAA-YSMTQNLRLSHFDMQPHRAPQQLLFERCCGLPITGEL 60

Query: 61  VLRSFPANRCTRFGLKACVQSPKDNYSNSSLGINAKGPTLAHRPQLLNNVDIDLVDGIDR 120
           VLR F  NRCT F LKAC QSP+DNYSN S G NAKGPTLA RPQLLN+VD +LVDGIDR
Sbjct: 61  VLRGFSGNRCTGFSLKACAQSPQDNYSNGSFGFNAKGPTLARRPQLLNSVD-NLVDGIDR 120

Query: 121 RYSTTVHEEPQWGKNPLTFHDFSSRDKLVVAVDIDEVLGNFVSALNKFVADRYSSNHSVS 180
           R+S++VHEEP+WG NPLTFH+ SSRDKLVVAVDIDEVLGNFVSALNKFVADRYSSNHSVS
Sbjct: 121 RFSSSVHEEPKWG-NPLTFHEISSRDKLVVAVDIDEVLGNFVSALNKFVADRYSSNHSVS 180

Query: 181 EYHVYEFFRIWKCSRDEANIRVHEFFKTPYFKTGIWPIPGAQSTLLKLSRFCHLSVVTSR 240
           EYHVYEFFRIWKCSRDEANIRVHEFFKTPYFKTGIWPIPGAQSTLLKLSRFCHLSVVTSR
Sbjct: 181 EYHVYEFFRIWKCSRDEANIRVHEFFKTPYFKTGIWPIPGAQSTLLKLSRFCHLSVVTSR 240

Query: 241 QNAIKEHTLEWIEKHYPGLFQEIHFGNHFALDGESRSKAEICKSLGASVLIDDNPRYAIE 300
           QNAIKEHTLEWIEKHY GLFQEIHFGNHFALDGESRSKAEICKS GASVLIDDNPRYAIE
Sbjct: 241 QNAIKEHTLEWIEKHYQGLFQEIHFGNHFALDGESRSKAEICKSFGASVLIDDNPRYAIE 300

Query: 301 CAEAGIRVLLFDYENSYPWCKTECEDLPPLVSKVHNWEEVEKQLASCVLSS 352
           CAEAGIRVLLFDYENSYPWCKTEC DLPPLV+KVHNWEEVEKQLASCVL S
Sbjct: 301 CAEAGIRVLLFDYENSYPWCKTECGDLPPLVTKVHNWEEVEKQLASCVLPS 348

[Close]

BLAST of Lsi06G003740 vs. NCBI nr
Match: gi|659100208|ref|XP_008450982.1| (PREDICTED: uncharacterized protein LOC103492406 isoform X1 [Cucumis melo])

HSP 1 Score: 638.3 bits (1645), Expect = 8.1e-180
Identity = 301/328 (91.77%), Postives = 313/328 (95.43%), Query Frame = 1


Query: 22  AAHSLTQNLRSSHFHMQSHRPSQPLLFERCCGLPITGELVLRSFPANRCTRFGLKACVQS 81
           AA+S+TQN RSSHFHMQSHR  QPLLFERCCGLPITGELVLR F  NRCT FGLKACVQS
Sbjct: 2   AAYSMTQNFRSSHFHMQSHRAPQPLLFERCCGLPITGELVLRGFSGNRCTGFGLKACVQS 61

Query: 82  PKDNYSNSSLGINAKGPTLAHRPQLLNNVDIDLVDGIDRRYSTTVHEEPQWGKNPLTFHD 141
           PKDNYSN S G+NAKGPTL  RPQLLN+VDIDLVDGIDRR+S++VHEEP+WG NPLTFH+
Sbjct: 62  PKDNYSNGSFGLNAKGPTLVRRPQLLNSVDIDLVDGIDRRFSSSVHEEPKWG-NPLTFHE 121

Query: 142 FSSRDKLVVAVDIDEVLGNFVSALNKFVADRYSSNHSVSEYHVYEFFRIWKCSRDEANIR 201
           FSSRDKLVVAVDIDEVLGNFVSALNKFVAD YSS+HSVSEYHVYEFFRIWKCSRDEANIR
Sbjct: 122 FSSRDKLVVAVDIDEVLGNFVSALNKFVADHYSSHHSVSEYHVYEFFRIWKCSRDEANIR 181

Query: 202 VHEFFKTPYFKTGIWPIPGAQSTLLKLSRFCHLSVVTSRQNAIKEHTLEWIEKHYPGLFQ 261
           VHEFFKTPYFKTGIWPIPGAQSTLLKLSRFCHLSVVTSRQNAIKEHTLEWIEKHYPGLFQ
Sbjct: 182 VHEFFKTPYFKTGIWPIPGAQSTLLKLSRFCHLSVVTSRQNAIKEHTLEWIEKHYPGLFQ 241

Query: 262 EIHFGNHFALDGESRSKAEICKSLGASVLIDDNPRYAIECAEAGIRVLLFDYENSYPWCK 321
           EIHFGNHFALDGESRSKAEICKSLGASVLIDDNPRYAIECAEAGIRVLLFDYENSYPWCK
Sbjct: 242 EIHFGNHFALDGESRSKAEICKSLGASVLIDDNPRYAIECAEAGIRVLLFDYENSYPWCK 301

Query: 322 TECEDLPPLVSKVHNWEEVEKQLASCVL 350
           TEC +LPPLV+KVHNWEEVEK LASCVL
Sbjct: 302 TECGNLPPLVTKVHNWEEVEKHLASCVL 328

[Close]

BLAST of Lsi06G003740 vs. NCBI nr
Match: gi|659100214|ref|XP_008450985.1| (PREDICTED: uncharacterized protein LOC103492406 isoform X2 [Cucumis melo])

HSP 1 Score: 632.9 bits (1631), Expect = 3.4e-178
Identity = 298/324 (91.98%), Postives = 309/324 (95.37%), Query Frame = 1


Query: 26  LTQNLRSSHFHMQSHRPSQPLLFERCCGLPITGELVLRSFPANRCTRFGLKACVQSPKDN 85
           +TQN RSSHFHMQSHR  QPLLFERCCGLPITGELVLR F  NRCT FGLKACVQSPKDN
Sbjct: 1   MTQNFRSSHFHMQSHRAPQPLLFERCCGLPITGELVLRGFSGNRCTGFGLKACVQSPKDN 60

Query: 86  YSNSSLGINAKGPTLAHRPQLLNNVDIDLVDGIDRRYSTTVHEEPQWGKNPLTFHDFSSR 145
           YSN S G+NAKGPTL  RPQLLN+VDIDLVDGIDRR+S++VHEEP+WG NPLTFH+FSSR
Sbjct: 61  YSNGSFGLNAKGPTLVRRPQLLNSVDIDLVDGIDRRFSSSVHEEPKWG-NPLTFHEFSSR 120

Query: 146 DKLVVAVDIDEVLGNFVSALNKFVADRYSSNHSVSEYHVYEFFRIWKCSRDEANIRVHEF 205
           DKLVVAVDIDEVLGNFVSALNKFVAD YSS+HSVSEYHVYEFFRIWKCSRDEANIRVHEF
Sbjct: 121 DKLVVAVDIDEVLGNFVSALNKFVADHYSSHHSVSEYHVYEFFRIWKCSRDEANIRVHEF 180

Query: 206 FKTPYFKTGIWPIPGAQSTLLKLSRFCHLSVVTSRQNAIKEHTLEWIEKHYPGLFQEIHF 265
           FKTPYFKTGIWPIPGAQSTLLKLSRFCHLSVVTSRQNAIKEHTLEWIEKHYPGLFQEIHF
Sbjct: 181 FKTPYFKTGIWPIPGAQSTLLKLSRFCHLSVVTSRQNAIKEHTLEWIEKHYPGLFQEIHF 240

Query: 266 GNHFALDGESRSKAEICKSLGASVLIDDNPRYAIECAEAGIRVLLFDYENSYPWCKTECE 325
           GNHFALDGESRSKAEICKSLGASVLIDDNPRYAIECAEAGIRVLLFDYENSYPWCKTEC 
Sbjct: 241 GNHFALDGESRSKAEICKSLGASVLIDDNPRYAIECAEAGIRVLLFDYENSYPWCKTECG 300

Query: 326 DLPPLVSKVHNWEEVEKQLASCVL 350
           +LPPLV+KVHNWEEVEK LASCVL
Sbjct: 301 NLPPLVTKVHNWEEVEKHLASCVL 323

[Close]

BLAST of Lsi06G003740 vs. NCBI nr
Match: gi|823234128|ref|XP_012449700.1| (PREDICTED: uncharacterized protein LOC105772792 [Gossypium raimondii])

HSP 1 Score: 379.4 bits (973), Expect = 6.8e-102
Identity = 194/324 (59.88%), Postives = 228/324 (70.37%), Query Frame = 1


Query: 40  HRPSQPLLFERCCGLPITGELV-LRSFPANRCTRFGLKACVQSPKDNYSNSSLGINAKG- 99
           H  + P    RC      G+LV L ++  +RC   G        K N + SSL +  K  
Sbjct: 41  HLHTSPKDQRRC--FQFLGKLVPLENYNVSRCGSGG------GFKFNKAASSLNLTVKSC 100

Query: 100 ----------PTLAHRPQLLNNVDIDLVDGIDRRYSTTVHEEPQWGKNPLTFHDFSSRDK 159
                       LA   QL   ++I   D   +R +T         +  L F D    +K
Sbjct: 101 LNDSPRKWDQKALAFASQLARELEISKHDEPQKRANTVADSRGLSQRGTLDFPDKPLPEK 160

Query: 160 LVVAVDIDEVLGNFVSALNKFVADRYSSNHSVSEYHVYEFFRIWKCSRDEANIRVHEFFK 219
           +VVAVD+DEVLGNFVSALN+F+ADRYS NHSVSEYHVYEFFRIW CSRDEA+IRVHEFFK
Sbjct: 161 IVVAVDVDEVLGNFVSALNRFIADRYSLNHSVSEYHVYEFFRIWNCSRDEADIRVHEFFK 220

Query: 220 TPYFKTGIWPIPGAQSTLLKLSRFCHLSVVTSRQNAIKEHTLEWIEKHYPGLFQEIHFGN 279
           TPYFK GI P+PGAQ  L KLSRFC+LSVVTSRQN IK+HT+EW+EKHYPGLF EIHFGN
Sbjct: 221 TPYFKNGIHPLPGAQRALHKLSRFCNLSVVTSRQNVIKDHTIEWLEKHYPGLFHEIHFGN 280

Query: 280 HFALDGESRSKAEICKSLGASVLIDDNPRYAIECAEAGIRVLLFDYENSYPWCKTECEDL 339
           HFALDGESR K+EIC+ LGA +LIDDNPRYAIECA+ GIRVLLFDYENSYPWCKT+  D 
Sbjct: 281 HFALDGESRPKSEICRLLGAKILIDDNPRYAIECAQVGIRVLLFDYENSYPWCKTQSIDE 340

Query: 340 PPLVSKVHNWEEVEKQLASCVLSS 352
            PLV+KVH+WEEVE+Q+AS ++SS
Sbjct: 341 HPLVTKVHSWEEVEQQIASWIISS 356

[Close]

BLAST of Lsi06G003740 vs. NCBI nr
Match: gi|728846791|gb|KHG26234.1| (Putative 5'(3')-deoxyribonucleotidase [Gossypium arboreum])

HSP 1 Score: 377.5 bits (968), Expect = 2.6e-101
Identity = 193/324 (59.57%), Postives = 228/324 (70.37%), Query Frame = 1


Query: 40  HRPSQPLLFERCCGLPITGELV-LRSFPANRCTRFGLKACVQSPKDNYSNSSLGINAKG- 99
           H  + P    RC      G+LV L ++  +RC   G        K N + S L +  K  
Sbjct: 41  HLHTSPNDQRRC--FQFLGKLVPLENYNVSRCGSGG------DFKFNKAASGLNLTVKSC 100

Query: 100 ----------PTLAHRPQLLNNVDIDLVDGIDRRYSTTVHEEPQWGKNPLTFHDFSSRDK 159
                       LA   QL + ++I   D   +R +T         +  L F D    +K
Sbjct: 101 LNDSPRKWDQKALAFASQLASELEISKHDEPQKRANTVADSRGLSQRGTLDFPDKPLPEK 160

Query: 160 LVVAVDIDEVLGNFVSALNKFVADRYSSNHSVSEYHVYEFFRIWKCSRDEANIRVHEFFK 219
           +VVAVD+DEVLGNFVSALN+F+ADRYS NHSVSEYHVYEFFRIW CSRDEA+IRVHEFFK
Sbjct: 161 IVVAVDVDEVLGNFVSALNRFIADRYSLNHSVSEYHVYEFFRIWNCSRDEADIRVHEFFK 220

Query: 220 TPYFKTGIWPIPGAQSTLLKLSRFCHLSVVTSRQNAIKEHTLEWIEKHYPGLFQEIHFGN 279
           TPYFK GI P+PGAQ  L KLSRFC+LSVVTSRQN IK+HT+EW+EKHYPGLF EIHFGN
Sbjct: 221 TPYFKNGIHPLPGAQRALHKLSRFCNLSVVTSRQNVIKDHTIEWLEKHYPGLFHEIHFGN 280

Query: 280 HFALDGESRSKAEICKSLGASVLIDDNPRYAIECAEAGIRVLLFDYENSYPWCKTECEDL 339
           HFALDGESR K+EIC+ LGA +LIDDNPRYAIECA+ GIRVLLFDYENSYPWCKT+  D 
Sbjct: 281 HFALDGESRPKSEICRLLGAKILIDDNPRYAIECAQVGIRVLLFDYENSYPWCKTQSIDE 340

Query: 340 PPLVSKVHNWEEVEKQLASCVLSS 352
            PLV+KVH+WEEVE+Q+AS ++SS
Sbjct: 341 HPLVTKVHSWEEVEQQIASWIVSS 356

The following BLAST results are available for this feature:

BLAST of Lsi06G003740 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Lsi06G003740 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LX27_CUCSA	1.2e-182	89.46	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G598340 PE=4 SV=1	[more]
A0A0D2UBP6_GOSRA	4.7e-102	59.88	Uncharacterized protein OS=Gossypium raimondii GN=B456_010G094600 PE=4 SV=1	[more]
A0A0B0PP69_GOSAR	1.8e-101	59.57	Putative 5'(3')-deoxyribonucleotidase OS=Gossypium arboreum GN=F383_08015 PE=4 S...	[more]
F6HGY9_VITVI	3.7e-99	67.15	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0016g00260 PE=4 SV=...	[more]
V4UJ58_9ROSI	6.4e-99	64.73	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10008817mg PE=4 SV=1	[more]

BLAST of Lsi06G003740 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G33140.1	1.1e-94	75.12	Haloacid dehalogenase-like hydrolase (HAD) superfamily protein	[more]

BLAST of Lsi06G003740 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778663259\|ref\|XP_011660045.1\|	1.7e-182	89.46	PREDICTED: uncharacterized protein LOC101215456 [Cucumis sativus]	[more]
gi\|659100208\|ref\|XP_008450982.1\|	8.1e-180	91.77	PREDICTED: uncharacterized protein LOC103492406 isoform X1 [Cucumis melo]	[more]
gi\|659100214\|ref\|XP_008450985.1\|	3.4e-178	91.98	PREDICTED: uncharacterized protein LOC103492406 isoform X2 [Cucumis melo]	[more]
gi\|823234128\|ref\|XP_012449700.1\|	6.8e-102	59.88	PREDICTED: uncharacterized protein LOC105772792 [Gossypium raimondii]	[more]
gi\|728846791\|gb\|KHG26234.1\|	2.6e-101	59.57	Putative 5'(3')-deoxyribonucleotidase [Gossypium arboreum]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0009264	deoxyribonucleotide catabolic process

Vocabulary: **Molecular Function**
Term	Definition
GO:0008253	5'-nucleotidase activity

Vocabulary: **INTERPRO**
Term	Definition
IPR023214	HAD_sf
IPR010708	5'(3')-deoxyribonucleotidase

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009264	deoxyribonucleotide catabolic process
biological_process	GO:0016311	dephosphorylation
biological_process	GO:0006470	protein dephosphorylation
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0008253	5'-nucleotidase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi06G003740.1	Lsi06G003740.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010708	5'(3')-deoxyribonucleotidase	PFAM	PF06941	NT5C	coord: 148..341 score: 1.2
IPR023214	HAD-like domain	GENE3D	G3DSA:3.40.50.1000		coord: 201..345 score: 7.9
IPR023214	HAD-like domain	unknown	SSF56784	HAD-like	coord: 136..166 score: 1.11E-13coord: 196..345 score: 1.11
None	No IPR available	PANTHER	PTHR35134	FAMILY NOT NAMED	coord: 107..346 score: 3.9E
None	No IPR available	PANTHER	PTHR35134:SF2	SUBFAMILY NOT NAMED	coord: 107..346 score: 3.9E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi06G003740	Csa1G598340	Cucumber (Chinese Long) v2	culsiB058
Lsi06G003740	CSPI01G29060	Wild cucumber (PI 183967)	cpilsiB059
Lsi06G003740	Cucsa.142110	Cucumber (Gy14) v1	cgylsiB230
Lsi06G003740	CmaCh10G007990	Cucurbita maxima (Rimu)	cmalsiB063
Lsi06G003740	CmaCh11G007640	Cucurbita maxima (Rimu)	cmalsiB128
Lsi06G003740	CmoCh11G007730	Cucurbita moschata (Rifu)	cmolsiB118
Lsi06G003740	CmoCh10G008260	Cucurbita moschata (Rifu)	cmolsiB050
Lsi06G003740	Cla011125	Watermelon (97103) v1	lsiwmB396
Lsi06G003740	MELO3C015557	Melon (DHL92) v3.5.1	lsimeB396
Lsi06G003740	ClCG03G014710	Watermelon (Charleston Gray)	lsiwcgB364
Lsi06G003740	MELO3C015557.2	Melon (DHL92) v3.6.1	lsimedB418
Lsi06G003740	Cla97C03G064940	Watermelon (97103) v2	lsiwmbB365
Lsi06G003740	Bhi02G001471	Wax gourd	lsiwgoB517
Lsi06G003740	Cp4.1LG04g11390	Cucurbita pepo (Zucchini)	cpelsiB563
Lsi06G003740	Cp4.1LG18g02840	Cucurbita pepo (Zucchini)	cpelsiB305
Lsi06G003740	CsGy1G028280	Cucumber (Gy14) v2	cgyblsiB055
Lsi06G003740	Carg12926	Silver-seed gourd	carlsiB086
Lsi06G003740	Carg25197	Silver-seed gourd	carlsiB452
Lsi06G003740	CsaV3_1G041450	Cucumber (Chinese Long) v3	cuclsiB068

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None