Carg12926 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg12926
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Nucleotidase
Location	Cucurbita_argyrosperma_scaffold_052 : 122353 .. 125337 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGCTCATTCTTTGACGCGGAATCTTCGATCGTCTGATCTTCATATGCAATCCCTCCGTCCTTCTCAGCCACCGCTGTTCGATCGAAGCTTTCGAGGAAACAAATGCACTCGATTTGATCTCAAAGCTTGCGGTCAATCCCCCAAAGATAATTGCAGTAGCAGCTCGTTAGGGATCAATGCTAAGGGCCCGACACTTGTTCGTCGTCCACTGGTGCTTAACAACGTCGAGGTTGATTTAGTAGATGGAATTGATCGCAGATATTCTACCACTGTTCATGGAGAGACCCAATGGGGAAATCCTTTAACGTTCCATGACCTCTCTTCCAGGGACAAACTTGTTGTTGCTGTTGACATCGATGAGGGTTTGTATTTTCTTTCATCTCCTTCCCTGGATTTTAATTTTGTTTCTCGGATTTTCCCTTGTTCTTGTTCTTAATTCTTCTTCTGAATTCTCTGTTTACTAGTGGGTTTGGTGTCATGTGACAGAGACAGGACAACTCCAATTGAGATATTGTATGTTCATATAATCTAAGGACTAAATCTATGGAGTTGTTGACTTAGATTAATTAATTAATTTACTTGTTGACGACTTGCATAATTAAATTGATCTACACTGCATTAGCTAATGATTTTGCATGATCATGGCTACTTATTCTAGCCTGTTCTTGATTTGAGCTGAGAATTTGGTTATGCTAATCAATTATTGCACATGATAATTCTCGTAGTTCTCTGATCGAATACTTGTTTCTTTTTGTTGTTGTGTAGTTTTGGGAAACTTTGTCTCAGCTCTTAACAAGTTCGTTGCTGATCGATATTCTTCTAATCATTCAGTTTCGGAGTATCACGTCTATGAATTCTTCAGGGTATGATTATTTGTTGGGGTTTCCTTATGATTATTAGTACAATAGTCCTGAAGCTGTCCTGGGGAATGTCTAATATGAACCAGTCTGATTTAGGCTTTCGTTTCTGTTTCAGATATGGAATTGCTCTCGTGATGAAGGTACAGCTTTCTGGGATTGACTTTTAGTGACTTGTCGTCTATATCAAGATGGCTTTATTAATTATATATTGCTTATTGTTTTTCCTGATTGGAATCATACATTTGACTGATTGATGGTTGCATGTGGTTCTGAGATCTTGATTTATTTAATCTCTTTAAAAATATTCTTGACTATTTCCAAGCTTTCCATGTTGAATGAGTCCGAAATTGTAGGTTCACTGACACCATGTTATGTATTAGGCAGCATAAGCATCAATTGGTTGGTTTCATTACCTTTTCTTAGTTGAATAGATGGACCTTCCAGCATTATGTCCTTTAATATTTGTGAGTGTTCGGGCCGATTTGCGCACACTTTGACTCTTCTATTCTGATTGGGAAACCCCCTAATTTTACCTTCGTGTTAGAGCATACGTGATACAAAATAGTATATCTGTGATATCCCTCATTGGTTGGGGAGGAGAACAAACCACCATTTATAAGGGTGTGGAAACCTTTCCCTAGCAGACGCGTTTTAAAGCCTTGTGGGGAAGCCCGAAAGGGAAAGCCCAAAGAGGACAATATCTTACAATATCCTAATTTGTTTATCTTGAAAAAATATTGTTAGGATCCTTAAGTATGATCCTCTCTTGGGTTACATAATTGGCTTTGATATAAAGGTTTAAACTTTAGCATCGGAAAGGTATTTGTATACCAATGGCTTTAAGAAGGTATTTTTGGAATTCGTTCTTTGCTTCAACACTTTTTTGTCTAATCTTTGATATTGAATTTGGCCTTCGCACCTTGTGCTTTTAGAAGACAGTTCAGTTTACTGGTTTGAGAGATCTCTGTGTAACAGTCTTAAAACTTCTTTACAATTGCAATTGTGGAAACTGTTGAAAGGAACCTGAAACTAGTTAATCGTACGCTTTCGAAGGTTCGTGGAAACGTGCTTTATTTGCTCTGGGGAGCTAAAAGGCTGTGGGGTGATAGAAAAGCCTGTAACTGTGGAATGGTGATAAACCCCTTGAAAATTTCTGGAATTGGTATTTCAGAAGTTGACTCCAACAATTTTAGTCTGTTAGTTAATCTTGTGATCTAGAAAGTTTCAGACATAATCATATGGCACTTCTTATGTTAATATTTCCCAGTTTGTACTTCCTTTGTAGATTTGCACTTCTTTGAGAGAACTTTGCAGTCTTCAATGGAATTCGATGTGATTTTTACGCATGGAGAACTCTGGATCGATTTTTTCTTTACGCTCTTGAATCTGTTCATGAGATATTTCTGTCCATGGAAATATGTTTCTTAACTTGGTTGGTTGATTGGTTCTAAAACTTGTTTCCCTGCTTTACAGCTAATATTCGAGTTCACGAGTTCTTCAAGACACCATATTTCCAGTCTGGAATCTGGCCTATTCCCGGTGCACAGAGTACGCTTCTCAAGTTATCGAGATTCTGTCATCTTTCAGTCGTAACGTATGTATAGCTACATTGGATCATTTCGATACGGTATTGATTCCTTAATCGACGATGAACTGATCTCATTTGAACTAAGTTCAGGTCTCGGCAAAACGCAATCAAAGAGCACACGCTTAAGTGGATCGATAGGCACTATCCGGGACTGTTTCAGGAGATTCACTTCGGAAACCACTTTGCTCTGGATGGAGAGTCGAGATCAAAGGCGGAAATATGCAAGTATGTCAACACATCTTTCACTCTCTTTTATCACTTATTTTCCCATCCCTGGTAGAACAACATTCCCTATGGTGCAATATTTGTGATGAATTGGGACAGGTCTTTGGGAGCAAGCGTGCTAATTGACGATAACCCAAGATACGCAATCGAATGCGCTGAAGAGGGGATTCGAGTTCTACTTTTCGACTACGAGAACTCATATCCATGGTGCAAGACTGGGTATGAGGATCTGCCTGCCTTGGTCACCAAAGTTCACAACTGGGAGGACGTGGAGAAGCAGTTAACCTCATGGGTTCGTTCTTCTTAG

mRNA sequence

ATGGCTGCTCATTCTTTGACGCGGAATCTTCGATCGTCTGATCTTCATATGCAATCCCTCCGTCCTTCTCAGCCACCGCTGTTCGATCGAAGCTTTCGAGGAAACAAATGCACTCGATTTGATCTCAAAGCTTGCGGTCAATCCCCCAAAGATAATTGCAGTAGCAGCTCGTTAGGGATCAATGCTAAGGGCCCGACACTTGTTCGTCGTCCACTGGTGCTTAACAACGTCGAGGTTGATTTAGTAGATGGAATTGATCGCAGATATTCTACCACTGTTCATGGAGAGACCCAATGGGGAAATCCTTTAACGTTCCATGACCTCTCTTCCAGGGACAAACTTGTTGTTGCTGTTGACATCGATGAGGTTTTGGGAAACTTTGTCTCAGCTCTTAACAAGTTCGTTGCTGATCGATATTCTTCTAATCATTCAGTTTCGGAGTATCACGTCTATGAATTCTTCAGGATATGGAATTGCTCTCGTGATGAAGCTAATATTCGAGTTCACGAGTTCTTCAAGACACCATATTTCCAGTCTGGAATCTGGCCTATTCCCGGTGCACAGAGTACGCTTCTCAAGTTATCGAGATTCTGTCATCTTTCAGTCGTAACGTCTCGGCAAAACGCAATCAAAGAGCACACGCTTAAGTGGATCGATAGGCACTATCCGGGACTGTTTCAGGAGATTCACTTCGGAAACCACTTTGCTCTGGATGGAGAGTCGAGATCAAAGGCGGAAATATGCAAGTCTTTGGGAGCAAGCGTGCTAATTGACGATAACCCAAGATACGCAATCGAATGCGCTGAAGAGGGGATTCGAGTTCTACTTTTCGACTACGAGAACTCATATCCATGGTGCAAGACTGGGTATGAGGATCTGCCTGCCTTGGTCACCAAAGTTCACAACTGGGAGGACGTGGAGAAGCAGTTAACCTCATGGGTTCGTTCTTCTTAG

Coding sequence (CDS)

ATGGCTGCTCATTCTTTGACGCGGAATCTTCGATCGTCTGATCTTCATATGCAATCCCTCCGTCCTTCTCAGCCACCGCTGTTCGATCGAAGCTTTCGAGGAAACAAATGCACTCGATTTGATCTCAAAGCTTGCGGTCAATCCCCCAAAGATAATTGCAGTAGCAGCTCGTTAGGGATCAATGCTAAGGGCCCGACACTTGTTCGTCGTCCACTGGTGCTTAACAACGTCGAGGTTGATTTAGTAGATGGAATTGATCGCAGATATTCTACCACTGTTCATGGAGAGACCCAATGGGGAAATCCTTTAACGTTCCATGACCTCTCTTCCAGGGACAAACTTGTTGTTGCTGTTGACATCGATGAGGTTTTGGGAAACTTTGTCTCAGCTCTTAACAAGTTCGTTGCTGATCGATATTCTTCTAATCATTCAGTTTCGGAGTATCACGTCTATGAATTCTTCAGGATATGGAATTGCTCTCGTGATGAAGCTAATATTCGAGTTCACGAGTTCTTCAAGACACCATATTTCCAGTCTGGAATCTGGCCTATTCCCGGTGCACAGAGTACGCTTCTCAAGTTATCGAGATTCTGTCATCTTTCAGTCGTAACGTCTCGGCAAAACGCAATCAAAGAGCACACGCTTAAGTGGATCGATAGGCACTATCCGGGACTGTTTCAGGAGATTCACTTCGGAAACCACTTTGCTCTGGATGGAGAGTCGAGATCAAAGGCGGAAATATGCAAGTCTTTGGGAGCAAGCGTGCTAATTGACGATAACCCAAGATACGCAATCGAATGCGCTGAAGAGGGGATTCGAGTTCTACTTTTCGACTACGAGAACTCATATCCATGGTGCAAGACTGGGTATGAGGATCTGCCTGCCTTGGTCACCAAAGTTCACAACTGGGAGGACGTGGAGAAGCAGTTAACCTCATGGGTTCGTTCTTCTTAG

Protein sequence

MAAHSLTRNLRSSDLHMQSLRPSQPPLFDRSFRGNKCTRFDLKACGQSPKDNCSSSSLGINAKGPTLVRRPLVLNNVEVDLVDGIDRRYSTTVHGETQWGNPLTFHDLSSRDKLVVAVDIDEVLGNFVSALNKFVADRYSSNHSVSEYHVYEFFRIWNCSRDEANIRVHEFFKTPYFQSGIWPIPGAQSTLLKLSRFCHLSVVTSRQNAIKEHTLKWIDRHYPGLFQEIHFGNHFALDGESRSKAEICKSLGASVLIDDNPRYAIECAEEGIRVLLFDYENSYPWCKTGYEDLPALVTKVHNWEDVEKQLTSWVRSS

Homology

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BLAST of Carg12926 vs. NCBI nr
Match: XP_022960665.1 (uncharacterized protein LOC111461387 [Cucurbita moschata])

HSP 1 Score: 664.5 bits (1713), Expect = 1.8e-187
Identity = 316/317 (99.68%), Postives = 317/317 (100.00%), Query Frame = 0


Query: 1   MAAHSLTRNLRSSDLHMQSLRPSQPPLFDRSFRGNKCTRFDLKACGQSPKDNCSSSSLGI 60
           MAAHSLTRNLRSSDLHMQSLRPSQPPLFDRSFRGNKCTRFDLKACGQSPKDNCSSSSLGI
Sbjct: 1   MAAHSLTRNLRSSDLHMQSLRPSQPPLFDRSFRGNKCTRFDLKACGQSPKDNCSSSSLGI 60

Query: 61  NAKGPTLVRRPLVLNNVEVDLVDGIDRRYSTTVHGETQWGNPLTFHDLSSRDKLVVAVDI 120
           NAKGPTLVRRPLVLNNVEVDLVDGIDRRYSTTVHGETQWGNPLTFHDLSSRDKLVVAVD+
Sbjct: 61  NAKGPTLVRRPLVLNNVEVDLVDGIDRRYSTTVHGETQWGNPLTFHDLSSRDKLVVAVDV 120

Query: 121 DEVLGNFVSALNKFVADRYSSNHSVSEYHVYEFFRIWNCSRDEANIRVHEFFKTPYFQSG 180
           DEVLGNFVSALNKFVADRYSSNHSVSEYHVYEFFRIWNCSRDEANIRVHEFFKTPYFQSG
Sbjct: 121 DEVLGNFVSALNKFVADRYSSNHSVSEYHVYEFFRIWNCSRDEANIRVHEFFKTPYFQSG 180

Query: 181 IWPIPGAQSTLLKLSRFCHLSVVTSRQNAIKEHTLKWIDRHYPGLFQEIHFGNHFALDGE 240
           IWPIPGAQSTLLKLSRFCHLSVVTSRQNAIKEHTLKWIDRHYPGLFQEIHFGNHFALDGE
Sbjct: 181 IWPIPGAQSTLLKLSRFCHLSVVTSRQNAIKEHTLKWIDRHYPGLFQEIHFGNHFALDGE 240

Query: 241 SRSKAEICKSLGASVLIDDNPRYAIECAEEGIRVLLFDYENSYPWCKTGYEDLPALVTKV 300
           SRSKAEICKSLGASVLIDDNPRYAIECAEEGIRVLLFDYENSYPWCKTGYEDLPALVTKV
Sbjct: 241 SRSKAEICKSLGASVLIDDNPRYAIECAEEGIRVLLFDYENSYPWCKTGYEDLPALVTKV 300

Query: 301 HNWEDVEKQLTSWVRSS 318
           HNWEDVEKQLTSWVRSS
Sbjct: 301 HNWEDVEKQLTSWVRSS 317

[Close]

BLAST of Carg12926 vs. NCBI nr
Match: XP_023516299.1 (uncharacterized protein LOC111780197 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 652.9 bits (1683), Expect = 5.6e-184
Identity = 311/317 (98.11%), Postives = 313/317 (98.74%), Query Frame = 0


Query: 1   MAAHSLTRNLRSSDLHMQSLRPSQPPLFDRSFRGNKCTRFDLKACGQSPKDNCSSSSLGI 60
           MAAHSLTRNLRSSDLHMQSLRPSQPPLFDRSFRGN+CTRF LKACGQSPKDNCSSSSLGI
Sbjct: 1   MAAHSLTRNLRSSDLHMQSLRPSQPPLFDRSFRGNRCTRFGLKACGQSPKDNCSSSSLGI 60

Query: 61  NAKGPTLVRRPLVLNNVEVDLVDGIDRRYSTTVHGETQWGNPLTFHDLSSRDKLVVAVDI 120
           NAKGPTLVRRPLVLNNVEVDLVDGIDRRYSTTVHGETQWGNPLTFHDLSSRDKLVVAVDI
Sbjct: 61  NAKGPTLVRRPLVLNNVEVDLVDGIDRRYSTTVHGETQWGNPLTFHDLSSRDKLVVAVDI 120

Query: 121 DEVLGNFVSALNKFVADRYSSNHSVSEYHVYEFFRIWNCSRDEANIRVHEFFKTPYFQSG 180
           DEVLGNFVSALNKFVADRYSSNHSVSEYHVYEFFRIWNCSRDEANIRVHEFFKTPYFQSG
Sbjct: 121 DEVLGNFVSALNKFVADRYSSNHSVSEYHVYEFFRIWNCSRDEANIRVHEFFKTPYFQSG 180

Query: 181 IWPIPGAQSTLLKLSRFCHLSVVTSRQNAIKEHTLKWIDRHYPGLFQEIHFGNHFALDGE 240
           IWPIPGAQSTLLKLS FCHLSVVTSRQNAIKEHTLKWIDRHYPGLFQEIHFGNHFALDGE
Sbjct: 181 IWPIPGAQSTLLKLSTFCHLSVVTSRQNAIKEHTLKWIDRHYPGLFQEIHFGNHFALDGE 240

Query: 241 SRSKAEICKSLGASVLIDDNPRYAIECAEEGIRVLLFDYENSYPWCKTGYEDLPALVTKV 300
           SRSKAEICKSLGASVLIDDNPRYAIECAE GIRVLLFDYENSYPWCKTGYEDLPALVTKV
Sbjct: 241 SRSKAEICKSLGASVLIDDNPRYAIECAEAGIRVLLFDYENSYPWCKTGYEDLPALVTKV 300

Query: 301 HNWEDVEKQLTSWVRSS 318
           HNWEDVE+QLTSWVR S
Sbjct: 301 HNWEDVEQQLTSWVRCS 317

[Close]

BLAST of Carg12926 vs. NCBI nr
Match: XP_022987939.1 (uncharacterized protein LOC111485341 [Cucurbita maxima])

HSP 1 Score: 649.8 bits (1675), Expect = 4.7e-183
Identity = 309/317 (97.48%), Postives = 313/317 (98.74%), Query Frame = 0


Query: 1   MAAHSLTRNLRSSDLHMQSLRPSQPPLFDRSFRGNKCTRFDLKACGQSPKDNCSSSSLGI 60
           MAAHSLTRNLRSSDLHMQS+RPSQPPLFDRSFRGN+CTRF LKACGQSPKDNCSSSSLGI
Sbjct: 1   MAAHSLTRNLRSSDLHMQSIRPSQPPLFDRSFRGNRCTRFGLKACGQSPKDNCSSSSLGI 60

Query: 61  NAKGPTLVRRPLVLNNVEVDLVDGIDRRYSTTVHGETQWGNPLTFHDLSSRDKLVVAVDI 120
           NAKGPTLVRRPLVLNNVEVDLVDGID RYSTTVHGETQWGNPLTFHDLSSRDKLVVAVDI
Sbjct: 61  NAKGPTLVRRPLVLNNVEVDLVDGIDGRYSTTVHGETQWGNPLTFHDLSSRDKLVVAVDI 120

Query: 121 DEVLGNFVSALNKFVADRYSSNHSVSEYHVYEFFRIWNCSRDEANIRVHEFFKTPYFQSG 180
           DEVLGNFVSALNKFVAD+YSSNHSVSEYHVYEFFRIWNCSRDEANIRVHEFFKTPYFQSG
Sbjct: 121 DEVLGNFVSALNKFVADQYSSNHSVSEYHVYEFFRIWNCSRDEANIRVHEFFKTPYFQSG 180

Query: 181 IWPIPGAQSTLLKLSRFCHLSVVTSRQNAIKEHTLKWIDRHYPGLFQEIHFGNHFALDGE 240
           IWPIPGAQS LLKLSRFCHLSVVTSRQNAIKEHTLKWIDRHYPGLFQEIHFGNHFALDGE
Sbjct: 181 IWPIPGAQSMLLKLSRFCHLSVVTSRQNAIKEHTLKWIDRHYPGLFQEIHFGNHFALDGE 240

Query: 241 SRSKAEICKSLGASVLIDDNPRYAIECAEEGIRVLLFDYENSYPWCKTGYEDLPALVTKV 300
           SRSKAEICKSLGASVLIDDNPRYAIECAE GIRVLLFDYENSYPWCKTGYEDLPALVTKV
Sbjct: 241 SRSKAEICKSLGASVLIDDNPRYAIECAEAGIRVLLFDYENSYPWCKTGYEDLPALVTKV 300

Query: 301 HNWEDVEKQLTSWVRSS 318
           HNWEDVE+QLTSWVRSS
Sbjct: 301 HNWEDVEQQLTSWVRSS 317

[Close]

BLAST of Carg12926 vs. NCBI nr
Match: XP_022929499.1 (uncharacterized protein LOC111436047 [Cucurbita moschata] >XP_022929507.1 uncharacterized protein LOC111436047 [Cucurbita moschata])

HSP 1 Score: 565.8 bits (1457), Expect = 9.0e-158
Identity = 277/330 (83.94%), Postives = 290/330 (87.88%), Query Frame = 0


Query: 1   MAAHSLTRNLRSSDLHMQSLRPSQPPLFD-------------RSFRGNKCTRFDLKACGQ 60
           MAAHSLTRNL SS  HMQS RPSQP LF+             RSFR N+C RF L+AC Q
Sbjct: 1   MAAHSLTRNLCSSHFHMQSHRPSQPLLFENCCGFPISAELVLRSFRRNRCNRFGLRACVQ 60

Query: 61  SPKDNCSSSSLGINAKGPTLVRRPLVLNNVEVDLVDGIDRRYSTTVHGETQWGNPLTFHD 120
           S KDNCS+ SLG NAKGPT VRRP VLNNVE+DLVDGIDRRYSTTV GE QWGNPLTFHD
Sbjct: 61  SHKDNCSNGSLGTNAKGPTPVRRPQVLNNVEIDLVDGIDRRYSTTVQGEPQWGNPLTFHD 120

Query: 121 LSSRDKLVVAVDIDEVLGNFVSALNKFVADRYSSNHSVSEYHVYEFFRIWNCSRDEANIR 180
           LSSR KLVVAVD+DEVLGNFVSALNKFVADRYSSNHSVSEYHVYEFFRIWNCSRDEAN R
Sbjct: 121 LSSRGKLVVAVDVDEVLGNFVSALNKFVADRYSSNHSVSEYHVYEFFRIWNCSRDEANHR 180

Query: 181 VHEFFKTPYFQSGIWPIPGAQSTLLKLSRFCHLSVVTSRQNAIKEHTLKWIDRHYPGLFQ 240
           VHEFFKTPYF+ GIWPIPGAQSTLLKLSRFCHLSVVTSRQNAIKEHTL+WID+H+PGLFQ
Sbjct: 181 VHEFFKTPYFKVGIWPIPGAQSTLLKLSRFCHLSVVTSRQNAIKEHTLEWIDKHFPGLFQ 240

Query: 241 EIHFGNHFALDGESRSKAEICKSLGASVLIDDNPRYAIECAEEGIRVLLFDYENSYPWCK 300
           EIHFGNHFALDG SRSK EICKSLGA+VLIDDNPRYAIECA+ GIRVLLFDYENSYPWCK
Sbjct: 241 EIHFGNHFALDGVSRSKEEICKSLGATVLIDDNPRYAIECAKAGIRVLLFDYENSYPWCK 300

Query: 301 TGYEDLPALVTKVHNWEDVEKQLTSWVRSS 318
           T  EDLP LVTKV+NWEDVEKQLTS V SS
Sbjct: 301 TETEDLPPLVTKVYNWEDVEKQLTSLVLSS 330

[Close]

BLAST of Carg12926 vs. NCBI nr
Match: XP_022967795.1 (uncharacterized protein LOC111467200 [Cucurbita maxima])

HSP 1 Score: 563.5 bits (1451), Expect = 4.4e-157
Identity = 276/330 (83.64%), Postives = 289/330 (87.58%), Query Frame = 0


Query: 1   MAAHSLTRNLRSSDLHMQSLRPSQPPLFD-------------RSFRGNKCTRFDLKACGQ 60
           MAAHSLTRNL SS  HMQS RPSQP LF+             RSFR N+C RF L+AC Q
Sbjct: 1   MAAHSLTRNLCSSHFHMQSHRPSQPLLFENCCAFPISAELVLRSFRRNRCNRFGLRACVQ 60

Query: 61  SPKDNCSSSSLGINAKGPTLVRRPLVLNNVEVDLVDGIDRRYSTTVHGETQWGNPLTFHD 120
           S KDNCS+ SLG NAKGPT VRRP VLNNVE+DLVDGIDRRYSTTV GE QWGNPLTFHD
Sbjct: 61  SHKDNCSNGSLGTNAKGPTPVRRPQVLNNVEIDLVDGIDRRYSTTVQGEPQWGNPLTFHD 120

Query: 121 LSSRDKLVVAVDIDEVLGNFVSALNKFVADRYSSNHSVSEYHVYEFFRIWNCSRDEANIR 180
           LSSR KLVVAVD+DEVLGNFVSALNKFVADRYSSNHSVSEYHVYEFFRIW CSRDEAN R
Sbjct: 121 LSSRGKLVVAVDVDEVLGNFVSALNKFVADRYSSNHSVSEYHVYEFFRIWKCSRDEANHR 180

Query: 181 VHEFFKTPYFQSGIWPIPGAQSTLLKLSRFCHLSVVTSRQNAIKEHTLKWIDRHYPGLFQ 240
           VHEFFKTPYF+ GIWPIPGAQSTLLKLSRFCHLSVVTSRQNAIKEHTL+WI++H+PGLFQ
Sbjct: 181 VHEFFKTPYFKVGIWPIPGAQSTLLKLSRFCHLSVVTSRQNAIKEHTLEWIEKHFPGLFQ 240

Query: 241 EIHFGNHFALDGESRSKAEICKSLGASVLIDDNPRYAIECAEEGIRVLLFDYENSYPWCK 300
           EIHFGNHFALDG SRSK EICKSLGA+VLIDDNPRYAIECAE GIRVLLFDYENSYPWCK
Sbjct: 241 EIHFGNHFALDGVSRSKEEICKSLGATVLIDDNPRYAIECAEAGIRVLLFDYENSYPWCK 300

Query: 301 TGYEDLPALVTKVHNWEDVEKQLTSWVRSS 318
           T  EDLP LVTKV+NWEDVEKQLTS V SS
Sbjct: 301 TETEDLPPLVTKVYNWEDVEKQLTSLVLSS 330

[Close]

BLAST of Carg12926 vs. TAIR10
Match: AT4G33140.1 (Haloacid dehalogenase-like hydrolase (HAD) superfamily protein)

HSP 1 Score: 332.8 bits (852), Expect = 2.3e-91
Identity = 151/201 (75.12%), Postives = 177/201 (88.06%), Query Frame = 0


Query: 112 DKLVVAVDIDEVLGNFVSALNKFVADRYSSNHSVSEYHVYEFFRIWNCSRDEANIRVHEF 171
           DK+VVAVDIDEVLGNFVSALN+F+ADRY SNHSVSEYHVYEFF+IWNCSR+EA++RVHEF
Sbjct: 147 DKIVVAVDIDEVLGNFVSALNRFIADRYLSNHSVSEYHVYEFFKIWNCSRNEADLRVHEF 206

Query: 172 FKTPYFQSGIWPIPGAQSTLLKLSRFCHLSVVTSRQNAIKEHTLKWIDRHYPGLFQEIHF 231
           FKT YF+ GI P+PGA  TL KLS++C +SVVTSRQNAIKEHTL+WI+ H+PGLF++IHF
Sbjct: 207 FKTSYFKKGIHPLPGAHKTLHKLSKYCDMSVVTSRQNAIKEHTLEWIEIHFPGLFKQIHF 266

Query: 232 GNHFALDGESRSKAEICKSLGASVLIDDNPRYAIECAEEGIRVLLFDYENSYPWCKTGYE 291
           GNHFAL GESR K+EIC+S GA +LIDDNPRYA ECA  G++VLLFDYENSYPW KT   
Sbjct: 267 GNHFALHGESRPKSEICRSFGAEILIDDNPRYAEECANIGMKVLLFDYENSYPWSKTESV 326

Query: 292 DLPALVTKVHNWEDVEKQLTS 313
           D   LVT+VHNWE+VE+Q+ S
Sbjct: 327 DRHPLVTRVHNWEEVEQQILS 347

[Close]

BLAST of Carg12926 vs. TrEMBL
Match: tr|A0A1S3BQG9|A0A1S3BQG9_CUCME (uncharacterized protein LOC103492406 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103492406 PE=4 SV=1)

HSP 1 Score: 543.5 bits (1399), Expect = 3.1e-151
Identity = 261/327 (79.82%), Postives = 285/327 (87.16%), Query Frame = 0


Query: 1   MAAHSLTRNLRSSDLHMQSLRPSQPPLFD-------------RSFRGNKCTRFDLKACGQ 60
           MAA+S+T+N RSS  HMQS R  QP LF+             R F GN+CT F LKAC Q
Sbjct: 1   MAAYSMTQNFRSSHFHMQSHRAPQPLLFERCCGLPITGELVLRGFSGNRCTGFGLKACVQ 60

Query: 61  SPKDNCSSSSLGINAKGPTLVRRPLVLNNVEVDLVDGIDRRYSTTVHGETQWGNPLTFHD 120
           SPKDN S+ S G+NAKGPTLVRRP +LN+V++DLVDGIDRR+S++VH E +WGNPLTFH+
Sbjct: 61  SPKDNYSNGSFGLNAKGPTLVRRPQLLNSVDIDLVDGIDRRFSSSVHEEPKWGNPLTFHE 120

Query: 121 LSSRDKLVVAVDIDEVLGNFVSALNKFVADRYSSNHSVSEYHVYEFFRIWNCSRDEANIR 180
            SSRDKLVVAVDIDEVLGNFVSALNKFVAD YSS+HSVSEYHVYEFFRIW CSRDEANIR
Sbjct: 121 FSSRDKLVVAVDIDEVLGNFVSALNKFVADHYSSHHSVSEYHVYEFFRIWKCSRDEANIR 180

Query: 181 VHEFFKTPYFQSGIWPIPGAQSTLLKLSRFCHLSVVTSRQNAIKEHTLKWIDRHYPGLFQ 240
           VHEFFKTPYF++GIWPIPGAQSTLLKLSRFCHLSVVTSRQNAIKEHTL+WI++HYPGLFQ
Sbjct: 181 VHEFFKTPYFKTGIWPIPGAQSTLLKLSRFCHLSVVTSRQNAIKEHTLEWIEKHYPGLFQ 240

Query: 241 EIHFGNHFALDGESRSKAEICKSLGASVLIDDNPRYAIECAEEGIRVLLFDYENSYPWCK 300
           EIHFGNHFALDGESRSKAEICKSLGASVLIDDNPRYAIECAE GIRVLLFDYENSYPWCK
Sbjct: 241 EIHFGNHFALDGESRSKAEICKSLGASVLIDDNPRYAIECAEAGIRVLLFDYENSYPWCK 300

Query: 301 TGYEDLPALVTKVHNWEDVEKQLTSWV 315
           T   +LP LVTKVHNWE+VEK L S V
Sbjct: 301 TECGNLPPLVTKVHNWEEVEKHLASCV 327

[Close]

BLAST of Carg12926 vs. TrEMBL
Match: tr|A0A1S3BRK7|A0A1S3BRK7_CUCME (uncharacterized protein LOC103492406 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103492406 PE=4 SV=1)

HSP 1 Score: 536.6 bits (1381), Expect = 3.8e-149
Identity = 257/322 (79.81%), Postives = 280/322 (86.96%), Query Frame = 0


Query: 6   LTRNLRSSDLHMQSLRPSQPPLFD-------------RSFRGNKCTRFDLKACGQSPKDN 65
           +T+N RSS  HMQS R  QP LF+             R F GN+CT F LKAC QSPKDN
Sbjct: 1   MTQNFRSSHFHMQSHRAPQPLLFERCCGLPITGELVLRGFSGNRCTGFGLKACVQSPKDN 60

Query: 66  CSSSSLGINAKGPTLVRRPLVLNNVEVDLVDGIDRRYSTTVHGETQWGNPLTFHDLSSRD 125
            S+ S G+NAKGPTLVRRP +LN+V++DLVDGIDRR+S++VH E +WGNPLTFH+ SSRD
Sbjct: 61  YSNGSFGLNAKGPTLVRRPQLLNSVDIDLVDGIDRRFSSSVHEEPKWGNPLTFHEFSSRD 120

Query: 126 KLVVAVDIDEVLGNFVSALNKFVADRYSSNHSVSEYHVYEFFRIWNCSRDEANIRVHEFF 185
           KLVVAVDIDEVLGNFVSALNKFVAD YSS+HSVSEYHVYEFFRIW CSRDEANIRVHEFF
Sbjct: 121 KLVVAVDIDEVLGNFVSALNKFVADHYSSHHSVSEYHVYEFFRIWKCSRDEANIRVHEFF 180

Query: 186 KTPYFQSGIWPIPGAQSTLLKLSRFCHLSVVTSRQNAIKEHTLKWIDRHYPGLFQEIHFG 245
           KTPYF++GIWPIPGAQSTLLKLSRFCHLSVVTSRQNAIKEHTL+WI++HYPGLFQEIHFG
Sbjct: 181 KTPYFKTGIWPIPGAQSTLLKLSRFCHLSVVTSRQNAIKEHTLEWIEKHYPGLFQEIHFG 240

Query: 246 NHFALDGESRSKAEICKSLGASVLIDDNPRYAIECAEEGIRVLLFDYENSYPWCKTGYED 305
           NHFALDGESRSKAEICKSLGASVLIDDNPRYAIECAE GIRVLLFDYENSYPWCKT   +
Sbjct: 241 NHFALDGESRSKAEICKSLGASVLIDDNPRYAIECAEAGIRVLLFDYENSYPWCKTECGN 300

Query: 306 LPALVTKVHNWEDVEKQLTSWV 315
           LP LVTKVHNWE+VEK L S V
Sbjct: 301 LPPLVTKVHNWEEVEKHLASCV 322

[Close]

BLAST of Carg12926 vs. TrEMBL
Match: tr|A0A0A0LX27|A0A0A0LX27_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G598340 PE=4 SV=1)

HSP 1 Score: 528.5 bits (1360), Expect = 1.0e-146
Identity = 258/330 (78.18%), Postives = 281/330 (85.15%), Query Frame = 0


Query: 1   MAAHSLTRNLRSSDLHMQSLRPSQPPLFD-------------RSFRGNKCTRFDLKACGQ 60
           MAA+S+T+NLR S   MQ  R  Q  LF+             R F GN+CT F LKAC Q
Sbjct: 20  MAAYSMTQNLRLSHFDMQPHRAPQQLLFERCCGLPITGELVLRGFSGNRCTGFSLKACAQ 79

Query: 61  SPKDNCSSSSLGINAKGPTLVRRPLVLNNVEVDLVDGIDRRYSTTVHGETQWGNPLTFHD 120
           SP+DN S+ S G NAKGPTL RRP +LN+V+ +LVDGIDRR+S++VH E +WGNPLTFH+
Sbjct: 80  SPQDNYSNGSFGFNAKGPTLARRPQLLNSVD-NLVDGIDRRFSSSVHEEPKWGNPLTFHE 139

Query: 121 LSSRDKLVVAVDIDEVLGNFVSALNKFVADRYSSNHSVSEYHVYEFFRIWNCSRDEANIR 180
           +SSRDKLVVAVDIDEVLGNFVSALNKFVADRYSSNHSVSEYHVYEFFRIW CSRDEANIR
Sbjct: 140 ISSRDKLVVAVDIDEVLGNFVSALNKFVADRYSSNHSVSEYHVYEFFRIWKCSRDEANIR 199

Query: 181 VHEFFKTPYFQSGIWPIPGAQSTLLKLSRFCHLSVVTSRQNAIKEHTLKWIDRHYPGLFQ 240
           VHEFFKTPYF++GIWPIPGAQSTLLKLSRFCHLSVVTSRQNAIKEHTL+WI++HY GLFQ
Sbjct: 200 VHEFFKTPYFKTGIWPIPGAQSTLLKLSRFCHLSVVTSRQNAIKEHTLEWIEKHYQGLFQ 259

Query: 241 EIHFGNHFALDGESRSKAEICKSLGASVLIDDNPRYAIECAEEGIRVLLFDYENSYPWCK 300
           EIHFGNHFALDGESRSKAEICKS GASVLIDDNPRYAIECAE GIRVLLFDYENSYPWCK
Sbjct: 260 EIHFGNHFALDGESRSKAEICKSFGASVLIDDNPRYAIECAEAGIRVLLFDYENSYPWCK 319

Query: 301 TGYEDLPALVTKVHNWEDVEKQLTSWVRSS 318
           T   DLP LVTKVHNWE+VEKQL S V  S
Sbjct: 320 TECGDLPPLVTKVHNWEEVEKQLASCVLPS 348

[Close]

BLAST of Carg12926 vs. TrEMBL
Match: tr|A0A2I4EXJ0|A0A2I4EXJ0_9ROSI (uncharacterized protein LOC108993585 OS=Juglans regia OX=51240 GN=LOC108993585 PE=4 SV=1)

HSP 1 Score: 378.3 bits (970), Expect = 1.8e-101
Identity = 178/252 (70.63%), Postives = 208/252 (82.54%), Query Frame = 0


Query: 72  LVLNNVEVDLVDGIDRRYSTTV-------HGETQWGNPLTFHDLSSRDKLVVAVDIDEVL 131
           L + ++E+ L DG    ++ T        HG ++ G+PL F D    DK+VVAVD+DEVL
Sbjct: 128 LPVRDLEIGLQDGTASPHNATATANQNQQHGASRHGSPLGFPDRHLPDKIVVAVDVDEVL 187

Query: 132 GNFVSALNKFVADRYSSNHSVSEYHVYEFFRIWNCSRDEANIRVHEFFKTPYFQSGIWPI 191
           GNFVSALN+F+ADRY SNHS+SEYHVYEFF+IWNCSRDEA+IRVHEFFKTPYF++GI PI
Sbjct: 188 GNFVSALNRFIADRYFSNHSISEYHVYEFFKIWNCSRDEADIRVHEFFKTPYFKTGIHPI 247

Query: 192 PGAQSTLLKLSRFCHLSVVTSRQNAIKEHTLKWIDRHYPGLFQEIHFGNHFALDGESRSK 251
           PGA+  L  LSRFC+LSVVTSRQNAIK+HT+ WI++HYPGLFQEIHFGNHFALDG SR K
Sbjct: 248 PGARRALHTLSRFCNLSVVTSRQNAIKDHTIDWIEKHYPGLFQEIHFGNHFALDGVSRPK 307

Query: 252 AEICKSLGASVLIDDNPRYAIECAEEGIRVLLFDYENSYPWCKTGYEDLPALVTKVHNWE 311
           +EIC+SLGA+VLIDDNPRYAIECAE GIRVLLFDYENSYPWCKT   +   LVTKVHNW 
Sbjct: 308 SEICRSLGANVLIDDNPRYAIECAEIGIRVLLFDYENSYPWCKTESVNQHPLVTKVHNWA 367

Query: 312 DVEKQLTSWVRS 317
           +VEKQL SW+ S
Sbjct: 368 EVEKQLMSWIVS 379

[Close]

BLAST of Carg12926 vs. TrEMBL
Match: tr|A0A218WNG7|A0A218WNG7_PUNGR (Uncharacterized protein OS=Punica granatum OX=22663 GN=CDL15_Pgr013229 PE=4 SV=1)

HSP 1 Score: 376.3 bits (965), Expect = 6.7e-101
Identity = 187/275 (68.00%), Postives = 216/275 (78.55%), Query Frame = 0


Query: 42  LKACGQSPKDNCSSSSLGINAKGPTLVRRPLVLNNVEVDLVDGIDRRYSTTVHGETQWGN 101
           +K C  S  D   SSSL    + P      L L NVEV + D  D R    V+G  QWG+
Sbjct: 62  IKGCFNSVSD---SSSL---FQKPQSGAPRLTLRNVEVGIEDEKDAR---LVNGR-QWGS 121

Query: 102 PLTFHDLSSRDKLVVAVDIDEVLGNFVSALNKFVADRYSSNHSVSEYHVYEFFRIWNCSR 161
           PL F   +S +K+VVAVD+DEVLGNFVSALN+F+ADRYSSNHSVSEYHVYEF++IWNCSR
Sbjct: 122 PLCFPSSTSPEKIVVAVDVDEVLGNFVSALNRFIADRYSSNHSVSEYHVYEFYKIWNCSR 181

Query: 162 DEANIRVHEFFKTPYFQSGIWPIPGAQSTLLKLSRFCHLSVVTSRQNAIKEHTLKWIDRH 221
           DEA++RVHEFFKTPYF+ GI PIPGA++ L KLS FC LSVVTSRQNAIK+HT++WI++H
Sbjct: 182 DEADLRVHEFFKTPYFRMGIHPIPGARTALHKLSSFCKLSVVTSRQNAIKDHTIRWIEKH 241

Query: 222 YPGLFQEIHFGNHFALDGESRSKAEICKSLGASVLIDDNPRYAIECAEEGIRVLLFDYEN 281
           YPGLF EIHFGNHFALDG SR K+EIC+SLGA VLIDDNPRYAIECA  GIRVLLFDY+N
Sbjct: 242 YPGLFHEIHFGNHFALDGVSRPKSEICRSLGAKVLIDDNPRYAIECASVGIRVLLFDYKN 301

Query: 282 SYPWCKTGYEDLPALVTKVHNWEDVEKQLTSWVRS 317
           SYPWCKT       LVTKVHNW +VE+QL SW+ S
Sbjct: 302 SYPWCKTESIHGHPLVTKVHNWGEVEQQLVSWIVS 326

The following BLAST results are available for this feature:

BLAST of Carg12926 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022960665.1	1.8e-187	99.68	uncharacterized protein LOC111461387 [Cucurbita moschata]	[more]
XP_023516299.1	5.6e-184	98.11	uncharacterized protein LOC111780197 [Cucurbita pepo subsp. pepo]	[more]
XP_022987939.1	4.7e-183	97.48	uncharacterized protein LOC111485341 [Cucurbita maxima]	[more]
XP_022929499.1	9.0e-158	83.94	uncharacterized protein LOC111436047 [Cucurbita moschata] >XP_022929507.1 unchar...	[more]
XP_022967795.1	4.4e-157	83.64	uncharacterized protein LOC111467200 [Cucurbita maxima]	[more]

BLAST of Carg12926 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G33140.1	2.3e-91	75.12	Haloacid dehalogenase-like hydrolase (HAD) superfamily protein	[more]

BLAST of Carg12926 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg12926 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BQG9\|A0A1S3BQG9_CUCME	3.1e-151	79.82	uncharacterized protein LOC103492406 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A1S3BRK7\|A0A1S3BRK7_CUCME	3.8e-149	79.81	uncharacterized protein LOC103492406 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A0A0LX27\|A0A0A0LX27_CUCSA	1.0e-146	78.18	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G598340 PE=4 SV=1	[more]
tr\|A0A2I4EXJ0\|A0A2I4EXJ0_9ROSI	1.8e-101	70.63	uncharacterized protein LOC108993585 OS=Juglans regia OX=51240 GN=LOC108993585 P...	[more]
tr\|A0A218WNG7\|A0A218WNG7_PUNGR	6.7e-101	68.00	Uncharacterized protein OS=Punica granatum OX=22663 GN=CDL15_Pgr013229 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0008253	5'-nucleotidase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0009264	deoxyribonucleotide catabolic process

Vocabulary: **INTERPRO**
Term	Definition
IPR036412	HAD-like_sf
IPR010708	5'(3')-deoxyribonucleotidase
IPR023214	HAD_sf

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009264	deoxyribonucleotide catabolic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0008253	5'-nucleotidase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg12926-RA	Carg12926-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR023214	HAD superfamily	GENE3D	G3DSA:3.40.50.1000		coord: 96..311 e-value: 2.2E-8 score: 35.7
IPR010708	5'(3')-deoxyribonucleotidase	PFAM	PF06941	NT5C	coord: 114..280 e-value: 2.2E-14 score: 53.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..28
None	No IPR available	PANTHER	PTHR35134	FAMILY NOT NAMED	coord: 91..315
IPR036412	HAD-like superfamily	SUPERFAMILY	SSF56784	HAD-like	coord: 162..310 coord: 102..132

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg12926	Cla011125	Watermelon (97103) v1	carwmB0090
Carg12926	Csa1G598340	Cucumber (Chinese Long) v2	carcuB0101
Carg12926	MELO3C015557	Melon (DHL92) v3.5.1	carmeB0096
Carg12926	ClCG03G014710	Watermelon (Charleston Gray)	carwcgB0094
Carg12926	CSPI01G29060	Wild cucumber (PI 183967)	carcpiB0106
Carg12926	Cucsa.142110	Cucumber (Gy14) v1	carcgyB0112
Carg12926	CmaCh11G007640	Cucurbita maxima (Rimu)	carcmaB0120
Carg12926	CmaCh10G007990	Cucurbita maxima (Rimu)	carcmaB0119
Carg12926	CmoCh11G007730	Cucurbita moschata (Rifu)	carcmoB0129
Carg12926	CmoCh10G008260	Cucurbita moschata (Rifu)	carcmoB0128
Carg12926	Lsi06G003740	Bottle gourd (USVL1VR-Ls)	carlsiB086
Carg12926	Cp4.1LG18g02840	Cucurbita pepo (Zucchini)	carcpeB0138
Carg12926	Cp4.1LG04g11390	Cucurbita pepo (Zucchini)	carcpeB0141
Carg12926	CsGy1G028280	Cucumber (Gy14) v2	carcgybB0101
Carg12926	MELO3C015557.2	Melon (DHL92) v3.6.1	carmedB0098
Carg12926	CsaV3_1G041450	Cucumber (Chinese Long) v3	carcucB0109
Carg12926	Cla97C03G064940	Watermelon (97103) v2	carwmbB0094
Carg12926	Bhi02G001471	Wax gourd	carwgoB0110

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg12926	Carg25197	Silver-seed gourd	carcarB103

The following block(s) are covering this gene:

None