Lsi06G000180 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi06G000180
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionGermin-like protein 2
Locationchr06 : 181267 .. 182377 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CATCCCACCAACCAAACAATAATCCATGGCCTCCATTGCTCCCATTTCTCTCCTCACCTTTGCTCTCATTCTCACAATTTCTGCTGCAGACCTTGACTTGCTTCAAGATATTTGTGTCGCGGATCTCGCTTCTGGTATTTTCAACTTTTACTCCCTCTCCATTTCTTCACCTCATGATCTTTAGTCTAAGTGACTAATTTTGATAGGGATTAAAGTGAACGGGTTTGTATGCAAAACAAACATATCTGCCACCGACTTCTTCTTCAATGGACTTGCCAACCCCGGCCTCACCAACACTACGTCAGGTGCAGTGGTCACTGGAGCCAATGTCCAAAAAATCCCAGGCCTCAACACTCTAGGAGTGTCCCTCGCTCGCATTGACTACACCCCTGGTGGCCTCAATCCACCCCACACACACCCACGTGCCACCGAGATAGTGTTCGTTCTTGAAGGCGAGCTAGACGTCGGCTTCATAACTACAACCAACGTGTTGATATCCAAGTCCATCAAGAAGGGAGAAATATTTGTTTTCCCAAAGGGATTGGTGCACTTCCAAAAGAACAATGGGAAGGACGCTGCTGCAGTGATTGCGGCATTCAACAGCCAATTACCAGGAACCCAGTCTATTGCTACCACTCTATTTGCAGCAACTCCTTCAGTGCCGGATGACGTACTCACCAAGGCTTTCCAAGTTGGAACCAAGGAAGTTGAGAAAATCAAGTCTCGCTTTGCCCCCAAGAACTAAAACAAATGCTTCTTTTACACCTATAGTTTGCCCCAACATCAACATATACATACACAAATATCCTACTTCACATTCATGTTTCTTTCATATTCATCATTGTACCAATCCTAAAAATATCATTGTTCGTTTGATATATATTCTGTTCTACTCCGAATCTCAAACACTTAAACTAAGTACTTAAACTAAGTAAGTAAACATTTTCTGAGAAACAAAGGCATTCCGAAATTGTATATCAATCAAGGATATAGGTACACATCTTTCATAAAAAATAAAAAGAAAAGGTTATGCATGTTGCATATCAAGCAAGAACGTCTAACAAAAGTACATCCTCATAATTAATTTTAGGCCAGGCGTACTTCATGATAA

mRNA sequence

CATCCCACCAACCAAACAATAATCCATGGCCTCCATTGCTCCCATTTCTCTCCTCACCTTTGCTCTCATTCTCACAATTTCTGCTGCAGACCTTGACTTGCTTCAAGATATTTGTGTCGCGGATCTCGCTTCTGGGATTAAAGTGAACGGGTTTGTATGCAAAACAAACATATCTGCCACCGACTTCTTCTTCAATGGACTTGCCAACCCCGGCCTCACCAACACTACGTCAGGTGCAGTGGTCACTGGAGCCAATGTCCAAAAAATCCCAGGCCTCAACACTCTAGGAGTGTCCCTCGCTCGCATTGACTACACCCCTGGTGGCCTCAATCCACCCCACACACACCCACGTGCCACCGAGATAGTGTTCGTTCTTGAAGGCGAGCTAGACGTCGGCTTCATAACTACAACCAACGTGTTGATATCCAAGTCCATCAAGAAGGGAGAAATATTTGTTTTCCCAAAGGGATTGGTGCACTTCCAAAAGAACAATGGGAAGGACGCTGCTGCAGTGATTGCGGCATTCAACAGCCAATTACCAGGAACCCAGTCTATTGCTACCACTCTATTTGCAGCAACTCCTTCAGTGCCGGATGACGTACTCACCAAGGCTTTCCAAGTTGGAACCAAGGAAGTTGAGAAAATCAAGTCTCGCTTTGCCCCCAAGAACTAAAACAAATGCTTCTTTTACACCTATAGTTTGCCCCAACATCAACATATACATACACAAATATCCTACTTCACATTCATGTTTCTTTCATATTCATCATTGTACCAATCCTAAAAATATCATTGTTCGTTTGATATATATTCTGTTCTACTCCGAATCTCAAACACTTAAACTAAGTACTTAAACTAAGTAAGTAAACATTTTCTGAGAAACAAAGGCATTCCGAAATTGTATATCAATCAAGGATATAGGTACACATCTTTCATAAAAAATAAAAAGAAAAGGTTATGCATGTTGCATATCAAGCAAGAACGTCTAACAAAAGTACATCCTCATAATTAATTTTAGGCCAGGCGTACTTCATGATAA

Coding sequence (CDS)

ATGGCCTCCATTGCTCCCATTTCTCTCCTCACCTTTGCTCTCATTCTCACAATTTCTGCTGCAGACCTTGACTTGCTTCAAGATATTTGTGTCGCGGATCTCGCTTCTGGGATTAAAGTGAACGGGTTTGTATGCAAAACAAACATATCTGCCACCGACTTCTTCTTCAATGGACTTGCCAACCCCGGCCTCACCAACACTACGTCAGGTGCAGTGGTCACTGGAGCCAATGTCCAAAAAATCCCAGGCCTCAACACTCTAGGAGTGTCCCTCGCTCGCATTGACTACACCCCTGGTGGCCTCAATCCACCCCACACACACCCACGTGCCACCGAGATAGTGTTCGTTCTTGAAGGCGAGCTAGACGTCGGCTTCATAACTACAACCAACGTGTTGATATCCAAGTCCATCAAGAAGGGAGAAATATTTGTTTTCCCAAAGGGATTGGTGCACTTCCAAAAGAACAATGGGAAGGACGCTGCTGCAGTGATTGCGGCATTCAACAGCCAATTACCAGGAACCCAGTCTATTGCTACCACTCTATTTGCAGCAACTCCTTCAGTGCCGGATGACGTACTCACCAAGGCTTTCCAAGTTGGAACCAAGGAAGTTGAGAAAATCAAGTCTCGCTTTGCCCCCAAGAACTAA

Protein sequence

MASIAPISLLTFALILTISAADLDLLQDICVADLASGIKVNGFVCKTNISATDFFFNGLANPGLTNTTSGAVVTGANVQKIPGLNTLGVSLARIDYTPGGLNPPHTHPRATEIVFVLEGELDVGFITTTNVLISKSIKKGEIFVFPKGLVHFQKNNGKDAAAVIAAFNSQLPGTQSIATTLFAATPSVPDDVLTKAFQVGTKEVEKIKSRFAPKN
Homology
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BLAST of Lsi06G000180 vs. Swiss-Prot
Match: GL52_ORYSJ (Germin-like protein 5-1 OS=Oryza sativa subsp. japonica GN=Os05g0277500 PE=2 SV=1)

HSP 1 Score: 297.0 bits (759), Expect = 1.7e-79
Identity = 152/211 (72.04%), Postives = 176/211 (83.41%), Query Frame = 1 

Query: 5   APISLLTFALILTISAA-DLDLLQDICVADLASGIKVNGFVCKTNISATDFFFNGLANPG 64
           A +++L  AL+ T S A D DLLQDICVADL S +KVNGF CK  ++  DF+F GLA  G
Sbjct: 9   AVVAVLLLALLPTPSTAGDPDLLQDICVADLTSAVKVNGFACKAAVTEDDFYFKGLAAAG 68

Query: 65  LTNTTSGAVVTGANVQKIPGLNTLGVSLARIDYTPGGLNPPHTHPRATEIVFVLEGELDV 124
            TN T G+VVTGANV+K+PGLNTLGVS++RIDY PGGLNPPHTHPRATE+VFVL+G LDV
Sbjct: 69  NTNNTYGSVVTGANVEKLPGLNTLGVSMSRIDYAPGGLNPPHTHPRATEMVFVLQGTLDV 128

Query: 125 GFITTTNVLISKSIKKGEIFVFPKGLVHFQKNNGKDAAAVIAAFNSQLPGTQSIATTLFA 184
           GFITT N L +K+I  G++FVFP+GL+HFQKNNG   AAVI+AFNSQLPGTQS+A TLFA
Sbjct: 129 GFITTANKLYTKTISAGDVFVFPRGLLHFQKNNGDTPAAVISAFNSQLPGTQSLAMTLFA 188

Query: 185 ATPSVPDDVLTKAFQVGTKEVEKIKSRFAPK 215
           A+P VPD VLTKAFQVGTKEVEKIKSR APK
Sbjct: 189 ASPEVPDGVLTKAFQVGTKEVEKIKSRLAPK 219

[Close]
BLAST of Lsi06G000180 vs. Swiss-Prot
Match: RHRE_PEA (Rhicadhesin receptor OS=Pisum sativum GN=GER1 PE=1 SV=2)

HSP 1 Score: 295.4 bits (755), Expect = 4.9e-79
Identity = 155/216 (71.76%), Postives = 176/216 (81.48%), Query Frame = 1 

Query: 1   MASIAPISLLTFALILTISAADLDLLQDICVADLASGIKVNGFVCK--TNISATDFFFNG 60
           M  IA + L+  A   T +AAD D LQD+CVAD AS I VNGF CK  +N++A DFF N 
Sbjct: 1   MKLIAVLLLVVLATATTATAADADALQDLCVADYASVILVNGFACKPASNVTAEDFFSNL 60

Query: 61  LANPGLTNTTSGAVVTGANVQKIPGLNTLGVSLARIDYTPGGLNPPHTHPRATEIVFVLE 120
           L   G TN T G++VTGANVQ+IPGLNTLGVS+ARIDY PGGLNPPHTHPRATE+VFVLE
Sbjct: 61  LVKQGATNNTFGSLVTGANVQRIPGLNTLGVSMARIDYAPGGLNPPHTHPRATEMVFVLE 120

Query: 121 GELDVGFITTTNVLISKSIKKGEIFVFPKGLVHFQKNNGKDAAAVIAAFNSQLPGTQSIA 180
           G+LDVGFITTTN LI+K+I KGE FVFPKGLVHFQKNNG + A VIA FNSQLPGT +I 
Sbjct: 121 GQLDVGFITTTNQLIAKTIAKGETFVFPKGLVHFQKNNGWEPATVIAGFNSQLPGTVNIP 180

Query: 181 TTLFAATPSVPDDVLTKAFQVGTKEVEKIKSRFAPK 215
            TLF ATP VPD+VLTKAFQ+GTKEV+KIKS+FAPK
Sbjct: 181 LTLFNATPPVPDNVLTKAFQIGTKEVQKIKSKFAPK 216

[Close]
BLAST of Lsi06G000180 vs. Swiss-Prot
Match: GL24_ARATH (Germin-like protein subfamily 2 member 4 OS=Arabidopsis thaliana GN=GLP10 PE=2 SV=1)

HSP 1 Score: 291.6 bits (745), Expect = 7.1e-78
Identity = 145/205 (70.73%), Postives = 172/205 (83.90%), Query Frame = 1 

Query: 13  ALILTISAADLDLLQDICVADLASGIKVNGFVCK--TNISATDFFFNGLANPGLTNTTSG 72
           +L + + A D D LQD+CVAD  SGIKVNGF CK  +NI+A+DFFF G+  P + N T G
Sbjct: 14  SLNVIVLAYDPDTLQDLCVADRTSGIKVNGFTCKPESNITASDFFFAGIGKPAVVNNTVG 73

Query: 73  AVVTGANVQKIPGLNTLGVSLARIDYTPGGLNPPHTHPRATEIVFVLEGELDVGFITTTN 132
           + VTGANV+KI GLNTLGVSLARIDY PGGLNPPHTHPRATE++FVLEGELDVGFITT N
Sbjct: 74  SAVTGANVEKIAGLNTLGVSLARIDYAPGGLNPPHTHPRATEVIFVLEGELDVGFITTAN 133

Query: 133 VLISKSIKKGEIFVFPKGLVHFQKNNGK-DAAAVIAAFNSQLPGTQSIATTLFAATPSVP 192
            L +K++KKGE+FVFP+GL+H+QKNN K   A+VI+AFNSQLPGTQSIA TLF ATP++P
Sbjct: 134 KLFAKTVKKGEVFVFPRGLIHYQKNNDKAKPASVISAFNSQLPGTQSIAATLFTATPAIP 193

Query: 193 DDVLTKAFQVGTKEVEKIKSRFAPK 215
           D VLT  FQ+GTKE+EKIKS+FAPK
Sbjct: 194 DHVLTTTFQIGTKEIEKIKSKFAPK 218

[Close]
BLAST of Lsi06G000180 vs. Swiss-Prot
Match: GL21_ARATH (Germin-like protein subfamily 2 member 1 OS=Arabidopsis thaliana GN=GLP4 PE=2 SV=2)

HSP 1 Score: 282.7 bits (722), Expect = 3.3e-75
Identity = 143/208 (68.75%), Postives = 166/208 (79.81%), Query Frame = 1 

Query: 9   LLTFALILTISAADLDLLQDICVADLASGIKVNGFVCK--TNISATDFFFNGLANPGLTN 68
           LLT       S+AD D+LQD+CVADL SGIK+NGF CK    +++ DFF  GLA PGLTN
Sbjct: 11  LLTTVSFFISSSADPDMLQDLCVADLPSGIKINGFPCKDAATVTSADFFSQGLAKPGLTN 70

Query: 69  TTSGAVVTGANVQKIPGLNTLGVSLARIDYTPGGLNPPHTHPRATEIVFVLEGELDVGFI 128
            T GA+VTGANV  IPGLNTLGVSL+RIDY PGGLNPPHTHPRATE+VFVLEG LDVGF+
Sbjct: 71  NTFGALVTGANVMTIPGLNTLGVSLSRIDYAPGGLNPPHTHPRATEVVFVLEGTLDVGFL 130

Query: 129 TTTNVLISKSIKKGEIFVFPKGLVHFQKNNGKDAAAVIAAFNSQLPGTQSIATTLFAATP 188
           TT N LIS+S+KKG++F FPKGLVHFQKNNG   A+VIAAFNSQLPGTQS+  TLF +TP
Sbjct: 131 TTANKLISQSLKKGDVFAFPKGLVHFQKNNGDVPASVIAAFNSQLPGTQSLGATLFGSTP 190

Query: 189 SVPDDVLTKAFQVGTKEVEKIKSRFAPK 215
            VPD++L +AFQ     V+ IKS+F PK
Sbjct: 191 PVPDNILAQAFQTSPGTVKHIKSKFQPK 218

[Close]
BLAST of Lsi06G000180 vs. Swiss-Prot
Match: NEC1_NICLS (Nectarin-1 OS=Nicotiana langsdorffii x Nicotiana sanderae GN=NECI PE=1 SV=1)

HSP 1 Score: 282.0 bits (720), Expect = 5.6e-75
Identity = 141/210 (67.14%), Postives = 172/210 (81.90%), Query Frame = 1 

Query: 4   IAPISLLTFALILTISAADLDLLQDICVADLASGIKVNGFVCKTNISATDFFFNGLANPG 63
           +A + LL  ++     AAD D+LQD+CVADL S +KVNGF CKTN +A DF    ++ PG
Sbjct: 16  MAILFLLAISIDRYCFAADEDMLQDVCVADLHSKVKVNGFPCKTNFTAADFSSLAISKPG 75

Query: 64  LTNTTSGAVVTGANVQKIPGLNTLGVSLARIDYTPGGLNPPHTHPRATEIVFVLEGELDV 123
            TN   G+VVT ANV+++PGLNTLGVSLARIDY PGG+NPPHTHPRA+E+VFV+EGELDV
Sbjct: 76  ATNNKFGSVVTTANVEQVPGLNTLGVSLARIDYAPGGINPPHTHPRASEMVFVMEGELDV 135

Query: 124 GFITTTNVLISKSIKKGEIFVFPKGLVHFQKNNGKDAAAVIAAFNSQLPGTQSIATTLFA 183
           GFITT NVL+SK I KGE+FVFP+GLVHFQKNNG+  AAVI+AFNSQLPGTQSI  TLF 
Sbjct: 136 GFITTANVLVSKKIIKGEVFVFPRGLVHFQKNNGEVPAAVISAFNSQLPGTQSIPITLFG 195

Query: 184 ATPSVPDDVLTKAFQVGTKEVEKIKSRFAP 214
           A+P VPDDVL + FQ+ T++V++IKS+FAP
Sbjct: 196 ASPPVPDDVLAQTFQINTEDVQQIKSKFAP 225

[Close]
BLAST of Lsi06G000180 vs. TrEMBL
Match: A0A0A0LK24_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G035370 PE=3 SV=1)

HSP 1 Score: 333.6 bits (854), Expect = 1.8e-88
Identity = 170/197 (86.29%), Postives = 178/197 (90.36%), Query Frame = 1 

Query: 18  ISAADLDLLQDICVADLASGIKVNGFVCKTNISATDFFFNGLANPGLTNTTSGAVVTGAN 77
           I+AAD DLLQD+CVADLASGIKVNGF CK+N SA DFFFNGLA PG TN T G+ VTGAN
Sbjct: 21  ITAADPDLLQDVCVADLASGIKVNGFTCKSNFSADDFFFNGLAKPGATNNTLGSRVTGAN 80

Query: 78  VQKIPGLNTLGVSLARIDYTPGGLNPPHTHPRATEIVFVLEGELDVGFITTTNVLISKSI 137
           VQ IPGLNTLGVSLARIDY PGGLNPPHTHPRATEIVFVLEG+LDVGFITT NVL+SKSI
Sbjct: 81  VQSIPGLNTLGVSLARIDYAPGGLNPPHTHPRATEIVFVLEGQLDVGFITTGNVLVSKSI 140

Query: 138 KKGEIFVFPKGLVHFQKNNGKDAAAVIAAFNSQLPGTQSIATTLFAATPSVPDDVLTKAF 197
           KKGEIFVFPKGLVHFQKNNGK  AAVIAAFNSQ PGTQSIA  LFAA+P VPD+VLTKAF
Sbjct: 141 KKGEIFVFPKGLVHFQKNNGKVPAAVIAAFNSQFPGTQSIAAALFAASPPVPDNVLTKAF 200

Query: 198 QVGTKEVEKIKSRFAPK 215
           QVGTKEVEKIKSR APK
Sbjct: 201 QVGTKEVEKIKSRLAPK 217

[Close]
BLAST of Lsi06G000180 vs. TrEMBL
Match: Q0MYQ7_VITVI (Germin-like protein 2 OS=Vitis vinifera GN=VIT_14s0060g00120 PE=2 SV=1)

HSP 1 Score: 328.9 bits (842), Expect = 4.5e-87
Identity = 169/216 (78.24%), Postives = 192/216 (88.89%), Query Frame = 1 

Query: 1   MASIAPISLLTFALILTISAADLDLLQDICVADLASGIKVNGFVCK--TNISATDFFFNG 60
           MA++  + ++T A+     AAD D+LQD+CVADL SG+KVNGF CK  TNI+ATDFFF+G
Sbjct: 1   MAAVVALFVITLAVFSGTVAADPDMLQDVCVADLTSGVKVNGFSCKDATNITATDFFFDG 60

Query: 61  LANPGLTNTTSGAVVTGANVQKIPGLNTLGVSLARIDYTPGGLNPPHTHPRATEIVFVLE 120
           LA PGLTN + G++VTGANVQKIPGLNTLGVSL+RIDY PGGLNPPHTHPRATE+VFVLE
Sbjct: 61  LAKPGLTNNSMGSLVTGANVQKIPGLNTLGVSLSRIDYAPGGLNPPHTHPRATEMVFVLE 120

Query: 121 GELDVGFITTTNVLISKSIKKGEIFVFPKGLVHFQKNNGKDAAAVIAAFNSQLPGTQSIA 180
           GELDVGFITT+N LISKSIKKGEIFVFPKGLVHFQKNNG+  AAVI+AFNSQLPGTQSIA
Sbjct: 121 GELDVGFITTSNTLISKSIKKGEIFVFPKGLVHFQKNNGEVPAAVISAFNSQLPGTQSIA 180

Query: 181 TTLFAATPSVPDDVLTKAFQVGTKEVEKIKSRFAPK 215
            +LFAA+P VP++VLTKAFQVGTKEVEKIKSR APK
Sbjct: 181 VSLFAASPPVPNNVLTKAFQVGTKEVEKIKSRLAPK 216

[Close]
BLAST of Lsi06G000180 vs. TrEMBL
Match: B9RFS5_RICCO (Rhicadhesin receptor, putative OS=Ricinus communis GN=RCOM_1437110 PE=3 SV=1)

HSP 1 Score: 327.0 bits (837), Expect = 1.7e-86
Identity = 166/214 (77.57%), Postives = 188/214 (87.85%), Query Frame = 1 

Query: 1   MASIAPISLLTFALILTISAADLDLLQDICVADLASGIKVNGFVCKTNISATDFFFNGLA 60
           MA+   + ++ F ++L+  AAD DLLQD+CVADL SGIK+NGFVCK NI+A DF+ N LA
Sbjct: 1   MAATVALFVMAFGIVLSSVAADPDLLQDVCVADLTSGIKINGFVCKENITAEDFYSNVLA 60

Query: 61  NPGLTNTTSGAVVTGANVQKIPGLNTLGVSLARIDYTPGGLNPPHTHPRATEIVFVLEGE 120
            PGLTN T G++VTGANVQKIPGLNTLGVS++RIDY PGGLNPPHTHPRATE+VFVLEG+
Sbjct: 61  KPGLTNNTLGSLVTGANVQKIPGLNTLGVSMSRIDYAPGGLNPPHTHPRATEMVFVLEGQ 120

Query: 121 LDVGFITTTNVLISKSIKKGEIFVFPKGLVHFQKNNGKDAAAVIAAFNSQLPGTQSIATT 180
           LDVGFITT NVLISK+I KGEIFVFP+GLVHFQ+NNGK  AAVIAAFNSQLPGTQ+IA T
Sbjct: 121 LDVGFITTGNVLISKTISKGEIFVFPRGLVHFQQNNGKYPAAVIAAFNSQLPGTQAIAAT 180

Query: 181 LFAATPSVPDDVLTKAFQVGTKEVEKIKSRFAPK 215
           LFAATP VPD VLTKAFQVGTKEV+KIKSR APK
Sbjct: 181 LFAATPPVPDHVLTKAFQVGTKEVQKIKSRLAPK 214

[Close]
BLAST of Lsi06G000180 vs. TrEMBL
Match: A9PF73_POPTR (Rhicadhesin receptor family protein OS=Populus trichocarpa GN=POPTR_0005s00310g PE=2 SV=1)

HSP 1 Score: 325.9 bits (834), Expect = 3.8e-86
Identity = 171/215 (79.53%), Postives = 186/215 (86.51%), Query Frame = 1 

Query: 4   IAPISLLTFALILTISA---ADLDLLQDICVADLASGIKVNGFVCKTNISATDFFFNGLA 63
           +A +SLL   L L + A   AD DLLQD+CVADL+SG+KVNGF CK NISA DFFF GLA
Sbjct: 6   VAYLSLLYMTLGLVLVATVSADPDLLQDVCVADLSSGVKVNGFTCKENISAEDFFFAGLA 65

Query: 64  NPGLTNTTSGAVVTGANVQKIPGLNTLGVSLARIDYTPGGLNPPHTHPRATEIVFVLEGE 123
            PGLTN T G++VT ANVQKIPGLNTLGVS++RIDY PGGLNPPHTHPRATE+VFVLEG+
Sbjct: 66  KPGLTNNTFGSLVTAANVQKIPGLNTLGVSMSRIDYAPGGLNPPHTHPRATEMVFVLEGQ 125

Query: 124 LDVGFITTTNVLISKSIKKGEIFVFPKGLVHFQKNNGKDAAAVIAAFNSQLPGTQSIATT 183
           LDVGFITT NVLISK+IK GE FVFPKGLVHFQKNNG+ +AAVIAAFNSQLPGTQSIA T
Sbjct: 126 LDVGFITTANVLISKTIKVGETFVFPKGLVHFQKNNGQVSAAVIAAFNSQLPGTQSIAAT 185

Query: 184 LFAATPSVPDDVLTKAFQVGTKEVEKIKSRFAPKN 216
           LFAA P VPD VLTKAFQVGTKEV KIKSRFAPKN
Sbjct: 186 LFAAQPPVPDHVLTKAFQVGTKEVRKIKSRFAPKN 220

[Close]
BLAST of Lsi06G000180 vs. TrEMBL
Match: A0A022R6S0_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a013478mg PE=3 SV=1)

HSP 1 Score: 324.7 bits (831), Expect = 8.4e-86
Identity = 160/208 (76.92%), Postives = 183/208 (87.98%), Query Frame = 1 

Query: 7   ISLLTFALILTISAADLDLLQDICVADLASGIKVNGFVCKTNISATDFFFNGLANPGLTN 66
           +++L   ++ +  +AD ++LQDICVADL S +KVNGF CK+N++A DFFF GLA P LTN
Sbjct: 11  VTMLAMFMLSSTVSADPEMLQDICVADLTSAVKVNGFTCKSNVTADDFFFAGLAKPALTN 70

Query: 67  TTSGAVVTGANVQKIPGLNTLGVSLARIDYTPGGLNPPHTHPRATEIVFVLEGELDVGFI 126
           TT+GA VTGANVQ+IPGLNTLGVSL RIDY PGGLNPPHTHPRATE+VFVLEGELDVGFI
Sbjct: 71  TTTGAAVTGANVQRIPGLNTLGVSLGRIDYAPGGLNPPHTHPRATEVVFVLEGELDVGFI 130

Query: 127 TTTNVLISKSIKKGEIFVFPKGLVHFQKNNGKDAAAVIAAFNSQLPGTQSIATTLFAATP 186
           TT N+L SK+IKKGE+FVFPKGLVHFQKNNGK  AAV+AAFNSQLPGTQSIA TLFAA P
Sbjct: 131 TTANILYSKTIKKGEVFVFPKGLVHFQKNNGKSNAAVVAAFNSQLPGTQSIAATLFAAAP 190

Query: 187 SVPDDVLTKAFQVGTKEVEKIKSRFAPK 215
            VPD+VLT AFQVGTKEV+KIKS+FAPK
Sbjct: 191 PVPDNVLTTAFQVGTKEVQKIKSKFAPK 218

[Close]
BLAST of Lsi06G000180 vs. TAIR10
Match: AT3G62020.1 (AT3G62020.1 germin-like protein 10)

HSP 1 Score: 291.6 bits (745), Expect = 4.0e-79
Identity = 145/205 (70.73%), Postives = 172/205 (83.90%), Query Frame = 1 

Query: 13  ALILTISAADLDLLQDICVADLASGIKVNGFVCK--TNISATDFFFNGLANPGLTNTTSG 72
           +L + + A D D LQD+CVAD  SGIKVNGF CK  +NI+A+DFFF G+  P + N T G
Sbjct: 14  SLNVIVLAYDPDTLQDLCVADRTSGIKVNGFTCKPESNITASDFFFAGIGKPAVVNNTVG 73

Query: 73  AVVTGANVQKIPGLNTLGVSLARIDYTPGGLNPPHTHPRATEIVFVLEGELDVGFITTTN 132
           + VTGANV+KI GLNTLGVSLARIDY PGGLNPPHTHPRATE++FVLEGELDVGFITT N
Sbjct: 74  SAVTGANVEKIAGLNTLGVSLARIDYAPGGLNPPHTHPRATEVIFVLEGELDVGFITTAN 133

Query: 133 VLISKSIKKGEIFVFPKGLVHFQKNNGK-DAAAVIAAFNSQLPGTQSIATTLFAATPSVP 192
            L +K++KKGE+FVFP+GL+H+QKNN K   A+VI+AFNSQLPGTQSIA TLF ATP++P
Sbjct: 134 KLFAKTVKKGEVFVFPRGLIHYQKNNDKAKPASVISAFNSQLPGTQSIAATLFTATPAIP 193

Query: 193 DDVLTKAFQVGTKEVEKIKSRFAPK 215
           D VLT  FQ+GTKE+EKIKS+FAPK
Sbjct: 194 DHVLTTTFQIGTKEIEKIKSKFAPK 218

[Close]
BLAST of Lsi06G000180 vs. TAIR10
Match: AT1G09560.1 (AT1G09560.1 germin-like protein 5)

HSP 1 Score: 282.7 bits (722), Expect = 1.9e-76
Identity = 143/208 (68.75%), Postives = 166/208 (79.81%), Query Frame = 1 

Query: 9   LLTFALILTISAADLDLLQDICVADLASGIKVNGFVCK--TNISATDFFFNGLANPGLTN 68
           LLT       S+AD D+LQD+CVADL SGIK+NGF CK    +++ DFF  GLA PGLTN
Sbjct: 11  LLTTVSFFISSSADPDMLQDLCVADLPSGIKINGFPCKDAATVTSADFFSQGLAKPGLTN 70

Query: 69  TTSGAVVTGANVQKIPGLNTLGVSLARIDYTPGGLNPPHTHPRATEIVFVLEGELDVGFI 128
            T GA+VTGANV  IPGLNTLGVSL+RIDY PGGLNPPHTHPRATE+VFVLEG LDVGF+
Sbjct: 71  NTFGALVTGANVMTIPGLNTLGVSLSRIDYAPGGLNPPHTHPRATEVVFVLEGTLDVGFL 130

Query: 129 TTTNVLISKSIKKGEIFVFPKGLVHFQKNNGKDAAAVIAAFNSQLPGTQSIATTLFAATP 188
           TT N LIS+S+KKG++F FPKGLVHFQKNNG   A+VIAAFNSQLPGTQS+  TLF +TP
Sbjct: 131 TTANKLISQSLKKGDVFAFPKGLVHFQKNNGDVPASVIAAFNSQLPGTQSLGATLFGSTP 190

Query: 189 SVPDDVLTKAFQVGTKEVEKIKSRFAPK 215
            VPD++L +AFQ     V+ IKS+F PK
Sbjct: 191 PVPDNILAQAFQTSPGTVKHIKSKFQPK 218

[Close]
BLAST of Lsi06G000180 vs. TAIR10
Match: AT1G02335.1 (AT1G02335.1 germin-like protein subfamily 2 member 2 precursor)

HSP 1 Score: 279.6 bits (714), Expect = 1.6e-75
Identity = 142/213 (66.67%), Postives = 173/213 (81.22%), Query Frame = 1 

Query: 4   IAPISLLTFALILTISAADLDLLQDICVADLASGIKVNGFVCKT--NISATDFFFNGLAN 63
           I+ I  L+  +I +I A D D LQD+CVAD + G K+NGF CK   NI+ +DFFF G++ 
Sbjct: 6   ISIIIALSCIMITSIRAYDPDALQDLCVADKSHGTKLNGFPCKETLNITESDFFFAGISK 65

Query: 64  PGLTNTTSGAVVTGANVQKIPGLNTLGVSLARIDYTPGGLNPPHTHPRATEIVFVLEGEL 123
           P + N+T G+ VTGANV+KIPGLNTL VSLARIDY PGGLNPPHTHPRATE+V+VLEGEL
Sbjct: 66  PAVINSTMGSAVTGANVEKIPGLNTLSVSLARIDYAPGGLNPPHTHPRATEVVYVLEGEL 125

Query: 124 DVGFITTTNVLISKSIKKGEIFVFPKGLVHFQKNNGKDAAAVIAAFNSQLPGTQSIATTL 183
           +VGFITT N L +K+IK GE+FVFP+GLVHFQKNNGK  A+V++AFNSQLPGT S+A TL
Sbjct: 126 EVGFITTANKLFTKTIKIGEVFVFPRGLVHFQKNNGKSPASVLSAFNSQLPGTASVAATL 185

Query: 184 FAATPSVPDDVLTKAFQVGTKEVEKIKSRFAPK 215
           FAA P++P+DVLTK FQVG+K V+KIK R A K
Sbjct: 186 FAAEPALPEDVLTKTFQVGSKMVDKIKERLATK 218

[Close]
BLAST of Lsi06G000180 vs. TAIR10
Match: AT5G26700.1 (AT5G26700.1 RmlC-like cupins superfamily protein)

HSP 1 Score: 252.3 bits (643), Expect = 2.7e-67
Identity = 126/216 (58.33%), Postives = 169/216 (78.24%), Query Frame = 1 

Query: 1   MASIAPISLLTFALILTISAADLDLLQDICVADLASGIKVNGFVCK--TNISATDFFFNG 60
           MAS A   L+    +L ++ A  ++LQD+CVADL++ +KVNG+ CK  T I+  DF+F G
Sbjct: 1   MASFAT-HLVVVVTMLFVAMASAEMLQDVCVADLSNAVKVNGYTCKDSTQITPEDFYFKG 60

Query: 61  LANPGLTNTTSGAVVTGANVQKIPGLNTLGVSLARIDYTPGGLNPPHTHPRATEIVFVLE 120
           LAN   TNT++G+VVTGANV+K+PGLNTLG+S++RIDY P GLNPPH HPRA+EI+FVLE
Sbjct: 61  LANIAATNTSTGSVVTGANVEKLPGLNTLGLSMSRIDYAPNGLNPPHVHPRASEIIFVLE 120

Query: 121 GELDVGFITTTNVLISKSIKKGEIFVFPKGLVHFQKNNGKDAAAVIAAFNSQLPGTQSIA 180
           G+L VGF+TT   LI+K++ KG++F FPKGL+HFQKN     A+V+AAF+SQLPGTQS+ 
Sbjct: 121 GQLYVGFVTTAGKLIAKNLNKGDVFTFPKGLIHFQKNIANSPASVLAAFDSQLPGTQSLV 180

Query: 181 TTLFAATPSVPDDVLTKAFQVGTKEVEKIKSRFAPK 215
            +LF A   +PDD+L K+FQ+  K+V+KIK R+APK
Sbjct: 181 ASLFGA---LPDDILAKSFQLKHKQVKKIKLRYAPK 212

[Close]
BLAST of Lsi06G000180 vs. TAIR10
Match: AT3G05930.1 (AT3G05930.1 germin-like protein 8)

HSP 1 Score: 242.3 bits (617), Expect = 2.8e-64
Identity = 123/216 (56.94%), Postives = 163/216 (75.46%), Query Frame = 1 

Query: 3   SIAPISLLTFALILT-ISAADLDLLQDICVADLASGIKVNGFVCK--TNISATDFFFNGL 62
           S+ PI  +TF L+   ++ AD ++LQD CVADL++G+KVNG+ CK    ++  DF+F GL
Sbjct: 4   SMIPI-FVTFMLVAAHMALADTNMLQDFCVADLSNGLKVNGYPCKDPAKVTPEDFYFIGL 63

Query: 63  ANPGLT-NTTSGAVVTGANVQKIPGLNTLGVSLARIDYTPGGLNPPHTHPRATEIVFVLE 122
           A    T N++ G+ VTGANV+K+PGLNTLGVS++RIDY PGGLNPPH HPRA+E +FVLE
Sbjct: 64  ATAAATANSSMGSAVTGANVEKVPGLNTLGVSISRIDYAPGGLNPPHLHPRASEAIFVLE 123

Query: 123 GELDVGFITTTNVLISKSIKKGEIFVFPKGLVHFQKNNGKDAAAVIAAFNSQLPGTQSIA 182
           G L VGF+TTT  LISK + KG++FVFPK L+HFQ+N  K  A+V+AAF+SQLPGTQ + 
Sbjct: 124 GRLFVGFLTTTGKLISKHVNKGDVFVFPKALLHFQQNPNKAPASVLAAFDSQLPGTQVVG 183

Query: 183 TTLFAATPSVPDDVLTKAFQVGTKEVEKIKSRFAPK 215
            +LF + P +PDD+L KAF     E++KIK +F PK
Sbjct: 184 PSLFGSNPPIPDDLLAKAFGAAAPEIQKIKGKFPPK 218

[Close]
BLAST of Lsi06G000180 vs. NCBI nr
Match: gi|449453984|ref|XP_004144736.1| (PREDICTED: germin-like protein 5-1 [Cucumis sativus])

HSP 1 Score: 333.6 bits (854), Expect = 2.6e-88
Identity = 170/197 (86.29%), Postives = 178/197 (90.36%), Query Frame = 1 

Query: 18  ISAADLDLLQDICVADLASGIKVNGFVCKTNISATDFFFNGLANPGLTNTTSGAVVTGAN 77
           I+AAD DLLQD+CVADLASGIKVNGF CK+N SA DFFFNGLA PG TN T G+ VTGAN
Sbjct: 21  ITAADPDLLQDVCVADLASGIKVNGFTCKSNFSADDFFFNGLAKPGATNNTLGSRVTGAN 80

Query: 78  VQKIPGLNTLGVSLARIDYTPGGLNPPHTHPRATEIVFVLEGELDVGFITTTNVLISKSI 137
           VQ IPGLNTLGVSLARIDY PGGLNPPHTHPRATEIVFVLEG+LDVGFITT NVL+SKSI
Sbjct: 81  VQSIPGLNTLGVSLARIDYAPGGLNPPHTHPRATEIVFVLEGQLDVGFITTGNVLVSKSI 140

Query: 138 KKGEIFVFPKGLVHFQKNNGKDAAAVIAAFNSQLPGTQSIATTLFAATPSVPDDVLTKAF 197
           KKGEIFVFPKGLVHFQKNNGK  AAVIAAFNSQ PGTQSIA  LFAA+P VPD+VLTKAF
Sbjct: 141 KKGEIFVFPKGLVHFQKNNGKVPAAVIAAFNSQFPGTQSIAAALFAASPPVPDNVLTKAF 200

Query: 198 QVGTKEVEKIKSRFAPK 215
           QVGTKEVEKIKSR APK
Sbjct: 201 QVGTKEVEKIKSRLAPK 217

[Close]
BLAST of Lsi06G000180 vs. NCBI nr
Match: gi|1009116464|ref|XP_015874786.1| (PREDICTED: germin-like protein subfamily 2 member 1 [Ziziphus jujuba])

HSP 1 Score: 332.0 bits (850), Expect = 7.6e-88
Identity = 169/216 (78.24%), Postives = 189/216 (87.50%), Query Frame = 1 

Query: 1   MASIAPISLLTFALILTISAADLDLLQDICVADLASGIKVNGFVCK--TNISATDFFFNG 60
           MA+I  + ++TFA +   S AD DLLQD+CVA+L S +K+NGF CK   N+++ DFFF G
Sbjct: 1   MAAILALFVMTFAAVFATSVADPDLLQDVCVAELKSAVKLNGFTCKDIANVTSEDFFFAG 60

Query: 61  LANPGLTNTTSGAVVTGANVQKIPGLNTLGVSLARIDYTPGGLNPPHTHPRATEIVFVLE 120
           LA PG TN T G++VTGANV+KIPGLNTLGVSL+RIDY PGGLNPPHTHPRATEIVFVLE
Sbjct: 61  LAKPGPTNNTFGSLVTGANVEKIPGLNTLGVSLSRIDYAPGGLNPPHTHPRATEIVFVLE 120

Query: 121 GELDVGFITTTNVLISKSIKKGEIFVFPKGLVHFQKNNGKDAAAVIAAFNSQLPGTQSIA 180
           GELDVGFITT+N+LISKSIKKGEIFVFPKGLVHFQKNNGKD AAVIAAFNSQLPGTQSI 
Sbjct: 121 GELDVGFITTSNMLISKSIKKGEIFVFPKGLVHFQKNNGKDTAAVIAAFNSQLPGTQSIG 180

Query: 181 TTLFAATPSVPDDVLTKAFQVGTKEVEKIKSRFAPK 215
            TLFAA P VPD+VLTKAFQVGTKE+EKIKSRFAPK
Sbjct: 181 ATLFAAKPEVPDNVLTKAFQVGTKEIEKIKSRFAPK 216

[Close]
BLAST of Lsi06G000180 vs. NCBI nr
Match: gi|747089175|ref|XP_011092215.1| (PREDICTED: germin-like protein 5-1 [Sesamum indicum])

HSP 1 Score: 330.1 bits (845), Expect = 2.9e-87
Identity = 161/195 (82.56%), Postives = 179/195 (91.79%), Query Frame = 1 

Query: 21  ADLDLLQDICVADLASGIKVNGFVCKTNISATDFFFNGLANPGLTNTTSGAVVTGANVQK 80
           AD D+LQD+CVADL SG+KVNGF CK+N +A DFFF G+A PG TNTT+G++VTGANV+K
Sbjct: 19  ADPDMLQDVCVADLTSGVKVNGFPCKSNFTAEDFFFAGIAKPGATNTTTGSLVTGANVEK 78

Query: 81  IPGLNTLGVSLARIDYTPGGLNPPHTHPRATEIVFVLEGELDVGFITTTNVLISKSIKKG 140
           IPGLNTLGVSL+RIDY PGGLNPPHTHPRATE+VFVL GELDVGFITT+N LISKSIK+G
Sbjct: 79  IPGLNTLGVSLSRIDYAPGGLNPPHTHPRATEMVFVLYGELDVGFITTSNTLISKSIKEG 138

Query: 141 EIFVFPKGLVHFQKNNGKDAAAVIAAFNSQLPGTQSIATTLFAATPSVPDDVLTKAFQVG 200
           E+F FPKGLVHFQKNNGK  AAVI+AFNSQLPGTQSIA TLFAA P+VPDDVLTKAFQVG
Sbjct: 139 EVFAFPKGLVHFQKNNGKQPAAVISAFNSQLPGTQSIAATLFAAKPAVPDDVLTKAFQVG 198

Query: 201 TKEVEKIKSRFAPKN 216
           TKE+EKIKSRFAPKN
Sbjct: 199 TKEIEKIKSRFAPKN 213

[Close]
BLAST of Lsi06G000180 vs. NCBI nr
Match: gi|659070031|ref|XP_008453001.1| (PREDICTED: germin-like protein 5-1 [Cucumis melo])

HSP 1 Score: 330.1 bits (845), Expect = 2.9e-87
Identity = 173/210 (82.38%), Postives = 184/210 (87.62%), Query Frame = 1 

Query: 8   SLLTFALIL---TISAADLDLLQDICVADLASGIKVNGFVCKTNISATDFFFNGLANPGL 67
           +L T +L L    ++AAD DLLQD+CVADLASGIKVNGF CK+N SA DFFFNGLA  GL
Sbjct: 9   ALFTASLALFFFVVTAADPDLLQDVCVADLASGIKVNGFTCKSNFSADDFFFNGLAKSGL 68

Query: 68  TNTTSGAVVTGANVQKIPGLNTLGVSLARIDYTPGGLNPPHTHPRATEIVFVLEGELDVG 127
           TN T G+ VTGANVQ IPGLNTLGVSLARIDY PGGLNPPHTHPRATEIVFVLEG+LDVG
Sbjct: 69  TNNTLGSRVTGANVQSIPGLNTLGVSLARIDYAPGGLNPPHTHPRATEIVFVLEGQLDVG 128

Query: 128 FITTTNVLISKSIKKGEIFVFPKGLVHFQKNNGKDAAAVIAAFNSQLPGTQSIATTLFAA 187
           FITT NVL+SKSIKKGEIFVFPKGLVHFQKNNGK  AAVIAAFNSQ PGTQSIA  LFAA
Sbjct: 129 FITTGNVLVSKSIKKGEIFVFPKGLVHFQKNNGKVPAAVIAAFNSQFPGTQSIAAALFAA 188

Query: 188 TPSVPDDVLTKAFQVGTKEVEKIKSRFAPK 215
           +P VPD+VLTKAFQVGTKEVEKIKSR APK
Sbjct: 189 SPPVPDNVLTKAFQVGTKEVEKIKSRLAPK 218

[Close]
BLAST of Lsi06G000180 vs. NCBI nr
Match: gi|526118000|ref|NP_001267914.1| (germin-like protein 2 precursor [Vitis vinifera])

HSP 1 Score: 328.9 bits (842), Expect = 6.4e-87
Identity = 169/216 (78.24%), Postives = 192/216 (88.89%), Query Frame = 1 

Query: 1   MASIAPISLLTFALILTISAADLDLLQDICVADLASGIKVNGFVCK--TNISATDFFFNG 60
           MA++  + ++T A+     AAD D+LQD+CVADL SG+KVNGF CK  TNI+ATDFFF+G
Sbjct: 1   MAAVVALFVITLAVFSGTVAADPDMLQDVCVADLTSGVKVNGFSCKDATNITATDFFFDG 60

Query: 61  LANPGLTNTTSGAVVTGANVQKIPGLNTLGVSLARIDYTPGGLNPPHTHPRATEIVFVLE 120
           LA PGLTN + G++VTGANVQKIPGLNTLGVSL+RIDY PGGLNPPHTHPRATE+VFVLE
Sbjct: 61  LAKPGLTNNSMGSLVTGANVQKIPGLNTLGVSLSRIDYAPGGLNPPHTHPRATEMVFVLE 120

Query: 121 GELDVGFITTTNVLISKSIKKGEIFVFPKGLVHFQKNNGKDAAAVIAAFNSQLPGTQSIA 180
           GELDVGFITT+N LISKSIKKGEIFVFPKGLVHFQKNNG+  AAVI+AFNSQLPGTQSIA
Sbjct: 121 GELDVGFITTSNTLISKSIKKGEIFVFPKGLVHFQKNNGEVPAAVISAFNSQLPGTQSIA 180

Query: 181 TTLFAATPSVPDDVLTKAFQVGTKEVEKIKSRFAPK 215
            +LFAA+P VP++VLTKAFQVGTKEVEKIKSR APK
Sbjct: 181 VSLFAASPPVPNNVLTKAFQVGTKEVEKIKSRLAPK 216

The following BLAST results are available for this feature:
BLAST of Lsi06G000180 vs. Swiss-Prot
Match NameE-valueIdentityDescription
GL52_ORYSJ1.7e-7972.04Germin-like protein 5-1 OS=Oryza sativa subsp. japonica GN=Os05g0277500 PE=2 SV=... [more]
RHRE_PEA4.9e-7971.76Rhicadhesin receptor OS=Pisum sativum GN=GER1 PE=1 SV=2[more]
GL24_ARATH7.1e-7870.73Germin-like protein subfamily 2 member 4 OS=Arabidopsis thaliana GN=GLP10 PE=2 S... [more]
GL21_ARATH3.3e-7568.75Germin-like protein subfamily 2 member 1 OS=Arabidopsis thaliana GN=GLP4 PE=2 SV... [more]
NEC1_NICLS5.6e-7567.14Nectarin-1 OS=Nicotiana langsdorffii x Nicotiana sanderae GN=NECI PE=1 SV=1[more]
BLAST of Lsi06G000180 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LK24_CUCSA1.8e-8886.29Uncharacterized protein OS=Cucumis sativus GN=Csa_2G035370 PE=3 SV=1[more]
Q0MYQ7_VITVI4.5e-8778.24Germin-like protein 2 OS=Vitis vinifera GN=VIT_14s0060g00120 PE=2 SV=1[more]
B9RFS5_RICCO1.7e-8677.57Rhicadhesin receptor, putative OS=Ricinus communis GN=RCOM_1437110 PE=3 SV=1[more]
A9PF73_POPTR3.8e-8679.53Rhicadhesin receptor family protein OS=Populus trichocarpa GN=POPTR_0005s00310g ... [more]
A0A022R6S0_ERYGU8.4e-8676.92Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a013478mg PE=3 SV=1[more]
BLAST of Lsi06G000180 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G62020.14.0e-7970.73 germin-like protein 10[more]
AT1G09560.11.9e-7668.75 germin-like protein 5[more]
AT1G02335.11.6e-7566.67 germin-like protein subfamily 2 member 2 precursor[more]
AT5G26700.12.7e-6758.33 RmlC-like cupins superfamily protein[more]
AT3G05930.12.8e-6456.94 germin-like protein 8[more]
BLAST of Lsi06G000180 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449453984|ref|XP_004144736.1|2.6e-8886.29PREDICTED: germin-like protein 5-1 [Cucumis sativus][more]
gi|1009116464|ref|XP_015874786.1|7.6e-8878.24PREDICTED: germin-like protein subfamily 2 member 1 [Ziziphus jujuba][more]
gi|747089175|ref|XP_011092215.1|2.9e-8782.56PREDICTED: germin-like protein 5-1 [Sesamum indicum][more]
gi|659070031|ref|XP_008453001.1|2.9e-8782.38PREDICTED: germin-like protein 5-1 [Cucumis melo][more]
gi|526118000|ref|NP_001267914.1|6.4e-8778.24germin-like protein 2 precursor [Vitis vinifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0045735nutrient reservoir activity
GO:0030145manganese ion binding
Vocabulary: INTERPRO
TermDefinition
IPR019780Germin_Mn-BS
IPR014710RmlC-like_jellyroll
IPR011051RmlC_Cupin_sf
IPR006045Cupin_1
IPR001929Germin
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0046487 glyoxylate metabolic process
biological_process GO:0033609 oxalate metabolic process
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0010497 plasmodesmata-mediated intercellular transport
biological_process GO:2000280 regulation of root development
biological_process GO:0019430 removal of superoxide radicals
biological_process GO:0008150 biological_process
cellular_component GO:0005618 cell wall
cellular_component GO:0005576 extracellular region
cellular_component GO:0009506 plasmodesma
cellular_component GO:0005575 cellular_component
molecular_function GO:0030145 manganese ion binding
molecular_function GO:0045735 nutrient reservoir activity
molecular_function GO:0046564 oxalate decarboxylase activity
molecular_function GO:0004784 superoxide dismutase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi06G000180.1Lsi06G000180.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001929GerminPRINTSPR00325GERMINcoord: 105..125
score: 8.9E-27coord: 135..155
score: 8.9E-27coord: 168..183
score: 8.9
IPR006045Cupin 1PFAMPF00190Cupin_1coord: 59..204
score: 2.4
IPR006045Cupin 1SMARTSM00835Cupin_1_3coord: 57..205
score: 1.7
IPR011051RmlC-like cupin domainunknownSSF51182RmlC-like cupinscoord: 23..212
score: 3.65
IPR014710RmlC-like jelly roll foldGENE3DG3DSA:2.60.120.10coord: 22..213
score: 8.7
IPR019780Germin, manganese binding sitePROSITEPS00725GERMINcoord: 100..113
scor
NoneNo IPR availablePANTHERPTHR31238FAMILY NOT NAMEDcoord: 2..215
score: 2.7E
NoneNo IPR availablePANTHERPTHR31238:SF39GERMIN-LIKE PROTEIN SUBFAMILY 2 MEMBER 1-RELATEDcoord: 2..215
score: 2.7E