Cla005136 (gene) Watermelon (97103) v1

Overview
NameCla005136
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionGermin-like protein 2 (AHRD V1 ***- Q0MYQ7_VITVI); contains Interpro domain(s) IPR014710 RmlC-like jelly roll fold
LocationChr3 : 28805780 .. 28806499 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCTCCATTACTCCCATTTCTCTCTTCACATTTGTTCTCCTTCTTGCAACTTCTGCTGCTGACATTGACTTGCTTCAAGATATTTGTGTCGCTGATCTCGCTTCTGGTATTTCCAATTTTTACTCCCTCTCCATTTCTTCACTTCATGATCTTTAGTCTAAGTGACTCATTTTGGTAGGGATTAAAGTGAACGGGTTTGTATGCAAAACAAACATATCTGCTACCGACTTCTTCTTTGACGGACTTGCCAACCCCGGTCTCACCAACACTACATCAGGCGCGGTGGTCACTGGAGCTAATGTCCAAAAAATCCCAGGCCTCAACACTCTAGGAGTGTCCCTCGCTCGCATTGATTACGCCCCTGGTGGCCTGAATCCACCCCACACACACCCACGTGCCACCGAGATAGTGTTCGTTCTTGAAGGCGAGCTAGATGTCGGCTTCATAACTACAGGCAACGTGTTGATATCCAAGTCCATCAAGAAGGGAGAAATATTTGTTTTCCCAAAGGGATTGGTGCACTTCCAGAAGAACAATGGGAAGGACGCTGCTGCAGTGGTTGCGGCATTCAACAGCCAATTGCCAGGAACTCAGTCCATAGCTACCACTCTATTTGCAACAACTCCTTCAGTGCCAAATGACGTACTCACCAAGGCTTTCCAAGTTGGAACCAAGGAAGTTGAGAAAATCAAGTCTCGCTTTGCCCCCAAAAACTAA

mRNA sequence

ATGGCCTCCATTACTCCCATTTCTCTCTTCACATTTGTTCTCCTTCTTGCAACTTCTGCTGCTGACATTGACTTGCTTCAAGATATTTGTGTCGCTGATCTCGCTTCTGGGATTAAAGTGAACGGGTTTGTATGCAAAACAAACATATCTGCTACCGACTTCTTCTTTGACGGACTTGCCAACCCCGGTCTCACCAACACTACATCAGGCGCGGTGGTCACTGGAGCTAATGTCCAAAAAATCCCAGGCCTCAACACTCTAGGAGTGTCCCTCGCTCGCATTGATTACGCCCCTGGTGGCCTGAATCCACCCCACACACACCCACGTGCCACCGAGATAGTGTTCGTTCTTGAAGGCGAGCTAGATGTCGGCTTCATAACTACAGGCAACGTGTTGATATCCAAGTCCATCAAGAAGGGAGAAATATTTGTTTTCCCAAAGGGATTGGTGCACTTCCAGAAGAACAATGGGAAGGACGCTGCTGCAGTGGTTGCGGCATTCAACAGCCAATTGCCAGGAACTCAGTCCATAGCTACCACTCTATTTGCAACAACTCCTTCAGTGCCAAATGACGTACTCACCAAGGCTTTCCAAGTTGGAACCAAGGAAGTTGAGAAAATCAAGTCTCGCTTTGCCCCCAAAAACTAA

Coding sequence (CDS)

ATGGCCTCCATTACTCCCATTTCTCTCTTCACATTTGTTCTCCTTCTTGCAACTTCTGCTGCTGACATTGACTTGCTTCAAGATATTTGTGTCGCTGATCTCGCTTCTGGGATTAAAGTGAACGGGTTTGTATGCAAAACAAACATATCTGCTACCGACTTCTTCTTTGACGGACTTGCCAACCCCGGTCTCACCAACACTACATCAGGCGCGGTGGTCACTGGAGCTAATGTCCAAAAAATCCCAGGCCTCAACACTCTAGGAGTGTCCCTCGCTCGCATTGATTACGCCCCTGGTGGCCTGAATCCACCCCACACACACCCACGTGCCACCGAGATAGTGTTCGTTCTTGAAGGCGAGCTAGATGTCGGCTTCATAACTACAGGCAACGTGTTGATATCCAAGTCCATCAAGAAGGGAGAAATATTTGTTTTCCCAAAGGGATTGGTGCACTTCCAGAAGAACAATGGGAAGGACGCTGCTGCAGTGGTTGCGGCATTCAACAGCCAATTGCCAGGAACTCAGTCCATAGCTACCACTCTATTTGCAACAACTCCTTCAGTGCCAAATGACGTACTCACCAAGGCTTTCCAAGTTGGAACCAAGGAAGTTGAGAAAATCAAGTCTCGCTTTGCCCCCAAAAACTAA

Protein sequence

MASITPISLFTFVLLLATSAADIDLLQDICVADLASGIKVNGFVCKTNISATDFFFDGLANPGLTNTTSGAVVTGANVQKIPGLNTLGVSLARIDYAPGGLNPPHTHPRATEIVFVLEGELDVGFITTGNVLISKSIKKGEIFVFPKGLVHFQKNNGKDAAAVVAAFNSQLPGTQSIATTLFATTPSVPNDVLTKAFQVGTKEVEKIKSRFAPKN
Homology
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BLAST of Cla005136 vs. Swiss-Prot
Match: GL52_ORYSJ (Germin-like protein 5-1 OS=Oryza sativa subsp. japonica GN=Os05g0277500 PE=2 SV=1)

HSP 1 Score: 300.8 bits (769), Expect = 1.2e-80
Identity = 149/207 (71.98%), Postives = 171/207 (82.61%), Query Frame = 1 

Query: 13  VLLLA-----TSAADIDLLQDICVADLASGIKVNGFVCKTNISATDFFFDGLANPGLTNT 72
           VLLLA     ++A D DLLQDICVADL S +KVNGF CK  ++  DF+F GLA  G TN 
Sbjct: 13  VLLLALLPTPSTAGDPDLLQDICVADLTSAVKVNGFACKAAVTEDDFYFKGLAAAGNTNN 72

Query: 73  TSGAVVTGANVQKIPGLNTLGVSLARIDYAPGGLNPPHTHPRATEIVFVLEGELDVGFIT 132
           T G+VVTGANV+K+PGLNTLGVS++RIDYAPGGLNPPHTHPRATE+VFVL+G LDVGFIT
Sbjct: 73  TYGSVVTGANVEKLPGLNTLGVSMSRIDYAPGGLNPPHTHPRATEMVFVLQGTLDVGFIT 132

Query: 133 TGNVLISKSIKKGEIFVFPKGLVHFQKNNGKDAAAVVAAFNSQLPGTQSIATTLFATTPS 192
           T N L +K+I  G++FVFP+GL+HFQKNNG   AAV++AFNSQLPGTQS+A TLFA +P 
Sbjct: 133 TANKLYTKTISAGDVFVFPRGLLHFQKNNGDTPAAVISAFNSQLPGTQSLAMTLFAASPE 192

Query: 193 VPNDVLTKAFQVGTKEVEKIKSRFAPK 215
           VP+ VLTKAFQVGTKEVEKIKSR APK
Sbjct: 193 VPDGVLTKAFQVGTKEVEKIKSRLAPK 219

[Close]
BLAST of Cla005136 vs. Swiss-Prot
Match: GL24_ARATH (Germin-like protein subfamily 2 member 4 OS=Arabidopsis thaliana GN=GLP10 PE=2 SV=1)

HSP 1 Score: 295.8 bits (756), Expect = 3.8e-79
Identity = 146/211 (69.19%), Postives = 171/211 (81.04%), Query Frame = 1 

Query: 10  FTFVLL---LATSAADIDLLQDICVADLASGIKVNGFVCK--TNISATDFFFDGLANPGL 69
           F F LL   +   A D D LQD+CVAD  SGIKVNGF CK  +NI+A+DFFF G+  P +
Sbjct: 8   FFFTLLSLNVIVLAYDPDTLQDLCVADRTSGIKVNGFTCKPESNITASDFFFAGIGKPAV 67

Query: 70  TNTTSGAVVTGANVQKIPGLNTLGVSLARIDYAPGGLNPPHTHPRATEIVFVLEGELDVG 129
            N T G+ VTGANV+KI GLNTLGVSLARIDYAPGGLNPPHTHPRATE++FVLEGELDVG
Sbjct: 68  VNNTVGSAVTGANVEKIAGLNTLGVSLARIDYAPGGLNPPHTHPRATEVIFVLEGELDVG 127

Query: 130 FITTGNVLISKSIKKGEIFVFPKGLVHFQKNNGK-DAAAVVAAFNSQLPGTQSIATTLFA 189
           FITT N L +K++KKGE+FVFP+GL+H+QKNN K   A+V++AFNSQLPGTQSIA TLF 
Sbjct: 128 FITTANKLFAKTVKKGEVFVFPRGLIHYQKNNDKAKPASVISAFNSQLPGTQSIAATLFT 187

Query: 190 TTPSVPNDVLTKAFQVGTKEVEKIKSRFAPK 215
            TP++P+ VLT  FQ+GTKE+EKIKS+FAPK
Sbjct: 188 ATPAIPDHVLTTTFQIGTKEIEKIKSKFAPK 218

[Close]
BLAST of Cla005136 vs. Swiss-Prot
Match: GL21_ARATH (Germin-like protein subfamily 2 member 1 OS=Arabidopsis thaliana GN=GLP4 PE=2 SV=2)

HSP 1 Score: 293.1 bits (749), Expect = 2.4e-78
Identity = 143/214 (66.82%), Postives = 171/214 (79.91%), Query Frame = 1 

Query: 3   SITPISLFTFVLLLATSAADIDLLQDICVADLASGIKVNGFVCK--TNISATDFFFDGLA 62
           ++T + L T V    +S+AD D+LQD+CVADL SGIK+NGF CK    +++ DFF  GLA
Sbjct: 5   TLTLLLLLTTVSFFISSSADPDMLQDLCVADLPSGIKINGFPCKDAATVTSADFFSQGLA 64

Query: 63  NPGLTNTTSGAVVTGANVQKIPGLNTLGVSLARIDYAPGGLNPPHTHPRATEIVFVLEGE 122
            PGLTN T GA+VTGANV  IPGLNTLGVSL+RIDYAPGGLNPPHTHPRATE+VFVLEG 
Sbjct: 65  KPGLTNNTFGALVTGANVMTIPGLNTLGVSLSRIDYAPGGLNPPHTHPRATEVVFVLEGT 124

Query: 123 LDVGFITTGNVLISKSIKKGEIFVFPKGLVHFQKNNGKDAAAVVAAFNSQLPGTQSIATT 182
           LDVGF+TT N LIS+S+KKG++F FPKGLVHFQKNNG   A+V+AAFNSQLPGTQS+  T
Sbjct: 125 LDVGFLTTANKLISQSLKKGDVFAFPKGLVHFQKNNGDVPASVIAAFNSQLPGTQSLGAT 184

Query: 183 LFATTPSVPNDVLTKAFQVGTKEVEKIKSRFAPK 215
           LF +TP VP+++L +AFQ     V+ IKS+F PK
Sbjct: 185 LFGSTPPVPDNILAQAFQTSPGTVKHIKSKFQPK 218

[Close]
BLAST of Cla005136 vs. Swiss-Prot
Match: RHRE_PEA (Rhicadhesin receptor OS=Pisum sativum GN=GER1 PE=1 SV=2)

HSP 1 Score: 292.4 bits (747), Expect = 4.2e-78
Identity = 150/210 (71.43%), Postives = 170/210 (80.95%), Query Frame = 1 

Query: 9   LFTFVLLLATSA--ADIDLLQDICVADLASGIKVNGFVCK--TNISATDFFFDGLANPGL 68
           L   VL  AT+A  AD D LQD+CVAD AS I VNGF CK  +N++A DFF + L   G 
Sbjct: 7   LLLVVLATATTATAADADALQDLCVADYASVILVNGFACKPASNVTAEDFFSNLLVKQGA 66

Query: 69  TNTTSGAVVTGANVQKIPGLNTLGVSLARIDYAPGGLNPPHTHPRATEIVFVLEGELDVG 128
           TN T G++VTGANVQ+IPGLNTLGVS+ARIDYAPGGLNPPHTHPRATE+VFVLEG+LDVG
Sbjct: 67  TNNTFGSLVTGANVQRIPGLNTLGVSMARIDYAPGGLNPPHTHPRATEMVFVLEGQLDVG 126

Query: 129 FITTGNVLISKSIKKGEIFVFPKGLVHFQKNNGKDAAAVVAAFNSQLPGTQSIATTLFAT 188
           FITT N LI+K+I KGE FVFPKGLVHFQKNNG + A V+A FNSQLPGT +I  TLF  
Sbjct: 127 FITTTNQLIAKTIAKGETFVFPKGLVHFQKNNGWEPATVIAGFNSQLPGTVNIPLTLFNA 186

Query: 189 TPSVPNDVLTKAFQVGTKEVEKIKSRFAPK 215
           TP VP++VLTKAFQ+GTKEV+KIKS+FAPK
Sbjct: 187 TPPVPDNVLTKAFQIGTKEVQKIKSKFAPK 216

[Close]
BLAST of Cla005136 vs. Swiss-Prot
Match: NEC1_NICLS (Nectarin-1 OS=Nicotiana langsdorffii x Nicotiana sanderae GN=NECI PE=1 SV=1)

HSP 1 Score: 286.6 bits (732), Expect = 2.3e-76
Identity = 136/194 (70.10%), Postives = 163/194 (84.02%), Query Frame = 1 

Query: 20  AADIDLLQDICVADLASGIKVNGFVCKTNISATDFFFDGLANPGLTNTTSGAVVTGANVQ 79
           AAD D+LQD+CVADL S +KVNGF CKTN +A DF    ++ PG TN   G+VVT ANV+
Sbjct: 32  AADEDMLQDVCVADLHSKVKVNGFPCKTNFTAADFSSLAISKPGATNNKFGSVVTTANVE 91

Query: 80  KIPGLNTLGVSLARIDYAPGGLNPPHTHPRATEIVFVLEGELDVGFITTGNVLISKSIKK 139
           ++PGLNTLGVSLARIDYAPGG+NPPHTHPRA+E+VFV+EGELDVGFITT NVL+SK I K
Sbjct: 92  QVPGLNTLGVSLARIDYAPGGINPPHTHPRASEMVFVMEGELDVGFITTANVLVSKKIIK 151

Query: 140 GEIFVFPKGLVHFQKNNGKDAAAVVAAFNSQLPGTQSIATTLFATTPSVPNDVLTKAFQV 199
           GE+FVFP+GLVHFQKNNG+  AAV++AFNSQLPGTQSI  TLF  +P VP+DVL + FQ+
Sbjct: 152 GEVFVFPRGLVHFQKNNGEVPAAVISAFNSQLPGTQSIPITLFGASPPVPDDVLAQTFQI 211

Query: 200 GTKEVEKIKSRFAP 214
            T++V++IKS+FAP
Sbjct: 212 NTEDVQQIKSKFAP 225

[Close]
BLAST of Cla005136 vs. TrEMBL
Match: Q0MYQ7_VITVI (Germin-like protein 2 OS=Vitis vinifera GN=VIT_14s0060g00120 PE=2 SV=1)

HSP 1 Score: 342.0 bits (876), Expect = 5.1e-91
Identity = 170/216 (78.70%), Postives = 190/216 (87.96%), Query Frame = 1 

Query: 1   MASITPISLFTFVLLLATSAADIDLLQDICVADLASGIKVNGFVCK--TNISATDFFFDG 60
           MA++  + + T  +   T AAD D+LQD+CVADL SG+KVNGF CK  TNI+ATDFFFDG
Sbjct: 1   MAAVVALFVITLAVFSGTVAADPDMLQDVCVADLTSGVKVNGFSCKDATNITATDFFFDG 60

Query: 61  LANPGLTNTTSGAVVTGANVQKIPGLNTLGVSLARIDYAPGGLNPPHTHPRATEIVFVLE 120
           LA PGLTN + G++VTGANVQKIPGLNTLGVSL+RIDYAPGGLNPPHTHPRATE+VFVLE
Sbjct: 61  LAKPGLTNNSMGSLVTGANVQKIPGLNTLGVSLSRIDYAPGGLNPPHTHPRATEMVFVLE 120

Query: 121 GELDVGFITTGNVLISKSIKKGEIFVFPKGLVHFQKNNGKDAAAVVAAFNSQLPGTQSIA 180
           GELDVGFITT N LISKSIKKGEIFVFPKGLVHFQKNNG+  AAV++AFNSQLPGTQSIA
Sbjct: 121 GELDVGFITTSNTLISKSIKKGEIFVFPKGLVHFQKNNGEVPAAVISAFNSQLPGTQSIA 180

Query: 181 TTLFATTPSVPNDVLTKAFQVGTKEVEKIKSRFAPK 215
            +LFA +P VPN+VLTKAFQVGTKEVEKIKSR APK
Sbjct: 181 VSLFAASPPVPNNVLTKAFQVGTKEVEKIKSRLAPK 216

[Close]
BLAST of Cla005136 vs. TrEMBL
Match: A0A0A0LK24_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G035370 PE=3 SV=1)

HSP 1 Score: 337.8 bits (865), Expect = 9.6e-90
Identity = 170/208 (81.73%), Postives = 184/208 (88.46%), Query Frame = 1 

Query: 7   ISLFTFVLLLATSAADIDLLQDICVADLASGIKVNGFVCKTNISATDFFFDGLANPGLTN 66
           ++ F FV+    +AAD DLLQD+CVADLASGIKVNGF CK+N SA DFFF+GLA PG TN
Sbjct: 14  LAFFFFVI----TAADPDLLQDVCVADLASGIKVNGFTCKSNFSADDFFFNGLAKPGATN 73

Query: 67  TTSGAVVTGANVQKIPGLNTLGVSLARIDYAPGGLNPPHTHPRATEIVFVLEGELDVGFI 126
            T G+ VTGANVQ IPGLNTLGVSLARIDYAPGGLNPPHTHPRATEIVFVLEG+LDVGFI
Sbjct: 74  NTLGSRVTGANVQSIPGLNTLGVSLARIDYAPGGLNPPHTHPRATEIVFVLEGQLDVGFI 133

Query: 127 TTGNVLISKSIKKGEIFVFPKGLVHFQKNNGKDAAAVVAAFNSQLPGTQSIATTLFATTP 186
           TTGNVL+SKSIKKGEIFVFPKGLVHFQKNNGK  AAV+AAFNSQ PGTQSIA  LFA +P
Sbjct: 134 TTGNVLVSKSIKKGEIFVFPKGLVHFQKNNGKVPAAVIAAFNSQFPGTQSIAAALFAASP 193

Query: 187 SVPNDVLTKAFQVGTKEVEKIKSRFAPK 215
            VP++VLTKAFQVGTKEVEKIKSR APK
Sbjct: 194 PVPDNVLTKAFQVGTKEVEKIKSRLAPK 217

[Close]
BLAST of Cla005136 vs. TrEMBL
Match: A9PF73_POPTR (Rhicadhesin receptor family protein OS=Populus trichocarpa GN=POPTR_0005s00310g PE=2 SV=1)

HSP 1 Score: 334.3 bits (856), Expect = 1.1e-88
Identity = 165/203 (81.28%), Postives = 183/203 (90.15%), Query Frame = 1 

Query: 13  VLLLATSAADIDLLQDICVADLASGIKVNGFVCKTNISATDFFFDGLANPGLTNTTSGAV 72
           ++L+AT +AD DLLQD+CVADL+SG+KVNGF CK NISA DFFF GLA PGLTN T G++
Sbjct: 18  LVLVATVSADPDLLQDVCVADLSSGVKVNGFTCKENISAEDFFFAGLAKPGLTNNTFGSL 77

Query: 73  VTGANVQKIPGLNTLGVSLARIDYAPGGLNPPHTHPRATEIVFVLEGELDVGFITTGNVL 132
           VT ANVQKIPGLNTLGVS++RIDYAPGGLNPPHTHPRATE+VFVLEG+LDVGFITT NVL
Sbjct: 78  VTAANVQKIPGLNTLGVSMSRIDYAPGGLNPPHTHPRATEMVFVLEGQLDVGFITTANVL 137

Query: 133 ISKSIKKGEIFVFPKGLVHFQKNNGKDAAAVVAAFNSQLPGTQSIATTLFATTPSVPNDV 192
           ISK+IK GE FVFPKGLVHFQKNNG+ +AAV+AAFNSQLPGTQSIA TLFA  P VP+ V
Sbjct: 138 ISKTIKVGETFVFPKGLVHFQKNNGQVSAAVIAAFNSQLPGTQSIAATLFAAQPPVPDHV 197

Query: 193 LTKAFQVGTKEVEKIKSRFAPKN 216
           LTKAFQVGTKEV KIKSRFAPKN
Sbjct: 198 LTKAFQVGTKEVRKIKSRFAPKN 220

[Close]
BLAST of Cla005136 vs. TrEMBL
Match: B9RFS5_RICCO (Rhicadhesin receptor, putative OS=Ricinus communis GN=RCOM_1437110 PE=3 SV=1)

HSP 1 Score: 333.6 bits (854), Expect = 1.8e-88
Identity = 164/214 (76.64%), Postives = 189/214 (88.32%), Query Frame = 1 

Query: 1   MASITPISLFTFVLLLATSAADIDLLQDICVADLASGIKVNGFVCKTNISATDFFFDGLA 60
           MA+   + +  F ++L++ AAD DLLQD+CVADL SGIK+NGFVCK NI+A DF+ + LA
Sbjct: 1   MAATVALFVMAFGIVLSSVAADPDLLQDVCVADLTSGIKINGFVCKENITAEDFYSNVLA 60

Query: 61  NPGLTNTTSGAVVTGANVQKIPGLNTLGVSLARIDYAPGGLNPPHTHPRATEIVFVLEGE 120
            PGLTN T G++VTGANVQKIPGLNTLGVS++RIDYAPGGLNPPHTHPRATE+VFVLEG+
Sbjct: 61  KPGLTNNTLGSLVTGANVQKIPGLNTLGVSMSRIDYAPGGLNPPHTHPRATEMVFVLEGQ 120

Query: 121 LDVGFITTGNVLISKSIKKGEIFVFPKGLVHFQKNNGKDAAAVVAAFNSQLPGTQSIATT 180
           LDVGFITTGNVLISK+I KGEIFVFP+GLVHFQ+NNGK  AAV+AAFNSQLPGTQ+IA T
Sbjct: 121 LDVGFITTGNVLISKTISKGEIFVFPRGLVHFQQNNGKYPAAVIAAFNSQLPGTQAIAAT 180

Query: 181 LFATTPSVPNDVLTKAFQVGTKEVEKIKSRFAPK 215
           LFA TP VP+ VLTKAFQVGTKEV+KIKSR APK
Sbjct: 181 LFAATPPVPDHVLTKAFQVGTKEVQKIKSRLAPK 214

[Close]
BLAST of Cla005136 vs. TrEMBL
Match: A0A022R6S0_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a013478mg PE=3 SV=1)

HSP 1 Score: 333.6 bits (854), Expect = 1.8e-88
Identity = 161/208 (77.40%), Postives = 183/208 (87.98%), Query Frame = 1 

Query: 7   ISLFTFVLLLATSAADIDLLQDICVADLASGIKVNGFVCKTNISATDFFFDGLANPGLTN 66
           +++    +L +T +AD ++LQDICVADL S +KVNGF CK+N++A DFFF GLA P LTN
Sbjct: 11  VTMLAMFMLSSTVSADPEMLQDICVADLTSAVKVNGFTCKSNVTADDFFFAGLAKPALTN 70

Query: 67  TTSGAVVTGANVQKIPGLNTLGVSLARIDYAPGGLNPPHTHPRATEIVFVLEGELDVGFI 126
           TT+GA VTGANVQ+IPGLNTLGVSL RIDYAPGGLNPPHTHPRATE+VFVLEGELDVGFI
Sbjct: 71  TTTGAAVTGANVQRIPGLNTLGVSLGRIDYAPGGLNPPHTHPRATEVVFVLEGELDVGFI 130

Query: 127 TTGNVLISKSIKKGEIFVFPKGLVHFQKNNGKDAAAVVAAFNSQLPGTQSIATTLFATTP 186
           TT N+L SK+IKKGE+FVFPKGLVHFQKNNGK  AAVVAAFNSQLPGTQSIA TLFA  P
Sbjct: 131 TTANILYSKTIKKGEVFVFPKGLVHFQKNNGKSNAAVVAAFNSQLPGTQSIAATLFAAAP 190

Query: 187 SVPNDVLTKAFQVGTKEVEKIKSRFAPK 215
            VP++VLT AFQVGTKEV+KIKS+FAPK
Sbjct: 191 PVPDNVLTTAFQVGTKEVQKIKSKFAPK 218

[Close]
BLAST of Cla005136 vs. NCBI nr
Match: gi|526118000|ref|NP_001267914.1| (germin-like protein 2 precursor [Vitis vinifera])

HSP 1 Score: 342.0 bits (876), Expect = 7.3e-91
Identity = 170/216 (78.70%), Postives = 190/216 (87.96%), Query Frame = 1 

Query: 1   MASITPISLFTFVLLLATSAADIDLLQDICVADLASGIKVNGFVCK--TNISATDFFFDG 60
           MA++  + + T  +   T AAD D+LQD+CVADL SG+KVNGF CK  TNI+ATDFFFDG
Sbjct: 1   MAAVVALFVITLAVFSGTVAADPDMLQDVCVADLTSGVKVNGFSCKDATNITATDFFFDG 60

Query: 61  LANPGLTNTTSGAVVTGANVQKIPGLNTLGVSLARIDYAPGGLNPPHTHPRATEIVFVLE 120
           LA PGLTN + G++VTGANVQKIPGLNTLGVSL+RIDYAPGGLNPPHTHPRATE+VFVLE
Sbjct: 61  LAKPGLTNNSMGSLVTGANVQKIPGLNTLGVSLSRIDYAPGGLNPPHTHPRATEMVFVLE 120

Query: 121 GELDVGFITTGNVLISKSIKKGEIFVFPKGLVHFQKNNGKDAAAVVAAFNSQLPGTQSIA 180
           GELDVGFITT N LISKSIKKGEIFVFPKGLVHFQKNNG+  AAV++AFNSQLPGTQSIA
Sbjct: 121 GELDVGFITTSNTLISKSIKKGEIFVFPKGLVHFQKNNGEVPAAVISAFNSQLPGTQSIA 180

Query: 181 TTLFATTPSVPNDVLTKAFQVGTKEVEKIKSRFAPK 215
            +LFA +P VPN+VLTKAFQVGTKEVEKIKSR APK
Sbjct: 181 VSLFAASPPVPNNVLTKAFQVGTKEVEKIKSRLAPK 216

[Close]
BLAST of Cla005136 vs. NCBI nr
Match: gi|1009116464|ref|XP_015874786.1| (PREDICTED: germin-like protein subfamily 2 member 1 [Ziziphus jujuba])

HSP 1 Score: 339.3 bits (869), Expect = 4.8e-90
Identity = 168/216 (77.78%), Postives = 188/216 (87.04%), Query Frame = 1 

Query: 1   MASITPISLFTFVLLLATSAADIDLLQDICVADLASGIKVNGFVCK--TNISATDFFFDG 60
           MA+I  + + TF  + ATS AD DLLQD+CVA+L S +K+NGF CK   N+++ DFFF G
Sbjct: 1   MAAILALFVMTFAAVFATSVADPDLLQDVCVAELKSAVKLNGFTCKDIANVTSEDFFFAG 60

Query: 61  LANPGLTNTTSGAVVTGANVQKIPGLNTLGVSLARIDYAPGGLNPPHTHPRATEIVFVLE 120
           LA PG TN T G++VTGANV+KIPGLNTLGVSL+RIDYAPGGLNPPHTHPRATEIVFVLE
Sbjct: 61  LAKPGPTNNTFGSLVTGANVEKIPGLNTLGVSLSRIDYAPGGLNPPHTHPRATEIVFVLE 120

Query: 121 GELDVGFITTGNVLISKSIKKGEIFVFPKGLVHFQKNNGKDAAAVVAAFNSQLPGTQSIA 180
           GELDVGFITT N+LISKSIKKGEIFVFPKGLVHFQKNNGKD AAV+AAFNSQLPGTQSI 
Sbjct: 121 GELDVGFITTSNMLISKSIKKGEIFVFPKGLVHFQKNNGKDTAAVIAAFNSQLPGTQSIG 180

Query: 181 TTLFATTPSVPNDVLTKAFQVGTKEVEKIKSRFAPK 215
            TLFA  P VP++VLTKAFQVGTKE+EKIKSRFAPK
Sbjct: 181 ATLFAAKPEVPDNVLTKAFQVGTKEIEKIKSRFAPK 216

[Close]
BLAST of Cla005136 vs. NCBI nr
Match: gi|449453984|ref|XP_004144736.1| (PREDICTED: germin-like protein 5-1 [Cucumis sativus])

HSP 1 Score: 337.8 bits (865), Expect = 1.4e-89
Identity = 170/208 (81.73%), Postives = 184/208 (88.46%), Query Frame = 1 

Query: 7   ISLFTFVLLLATSAADIDLLQDICVADLASGIKVNGFVCKTNISATDFFFDGLANPGLTN 66
           ++ F FV+    +AAD DLLQD+CVADLASGIKVNGF CK+N SA DFFF+GLA PG TN
Sbjct: 14  LAFFFFVI----TAADPDLLQDVCVADLASGIKVNGFTCKSNFSADDFFFNGLAKPGATN 73

Query: 67  TTSGAVVTGANVQKIPGLNTLGVSLARIDYAPGGLNPPHTHPRATEIVFVLEGELDVGFI 126
            T G+ VTGANVQ IPGLNTLGVSLARIDYAPGGLNPPHTHPRATEIVFVLEG+LDVGFI
Sbjct: 74  NTLGSRVTGANVQSIPGLNTLGVSLARIDYAPGGLNPPHTHPRATEIVFVLEGQLDVGFI 133

Query: 127 TTGNVLISKSIKKGEIFVFPKGLVHFQKNNGKDAAAVVAAFNSQLPGTQSIATTLFATTP 186
           TTGNVL+SKSIKKGEIFVFPKGLVHFQKNNGK  AAV+AAFNSQ PGTQSIA  LFA +P
Sbjct: 134 TTGNVLVSKSIKKGEIFVFPKGLVHFQKNNGKVPAAVIAAFNSQFPGTQSIAAALFAASP 193

Query: 187 SVPNDVLTKAFQVGTKEVEKIKSRFAPK 215
            VP++VLTKAFQVGTKEVEKIKSR APK
Sbjct: 194 PVPDNVLTKAFQVGTKEVEKIKSRLAPK 217

[Close]
BLAST of Cla005136 vs. NCBI nr
Match: gi|659070031|ref|XP_008453001.1| (PREDICTED: germin-like protein 5-1 [Cucumis melo])

HSP 1 Score: 337.8 bits (865), Expect = 1.4e-89
Identity = 171/208 (82.21%), Postives = 185/208 (88.94%), Query Frame = 1 

Query: 7   ISLFTFVLLLATSAADIDLLQDICVADLASGIKVNGFVCKTNISATDFFFDGLANPGLTN 66
           ++LF FV+    +AAD DLLQD+CVADLASGIKVNGF CK+N SA DFFF+GLA  GLTN
Sbjct: 15  LALFFFVV----TAADPDLLQDVCVADLASGIKVNGFTCKSNFSADDFFFNGLAKSGLTN 74

Query: 67  TTSGAVVTGANVQKIPGLNTLGVSLARIDYAPGGLNPPHTHPRATEIVFVLEGELDVGFI 126
            T G+ VTGANVQ IPGLNTLGVSLARIDYAPGGLNPPHTHPRATEIVFVLEG+LDVGFI
Sbjct: 75  NTLGSRVTGANVQSIPGLNTLGVSLARIDYAPGGLNPPHTHPRATEIVFVLEGQLDVGFI 134

Query: 127 TTGNVLISKSIKKGEIFVFPKGLVHFQKNNGKDAAAVVAAFNSQLPGTQSIATTLFATTP 186
           TTGNVL+SKSIKKGEIFVFPKGLVHFQKNNGK  AAV+AAFNSQ PGTQSIA  LFA +P
Sbjct: 135 TTGNVLVSKSIKKGEIFVFPKGLVHFQKNNGKVPAAVIAAFNSQFPGTQSIAAALFAASP 194

Query: 187 SVPNDVLTKAFQVGTKEVEKIKSRFAPK 215
            VP++VLTKAFQVGTKEVEKIKSR APK
Sbjct: 195 PVPDNVLTKAFQVGTKEVEKIKSRLAPK 218

[Close]
BLAST of Cla005136 vs. NCBI nr
Match: gi|566168527|ref|XP_006382248.1| (rhicadhesin receptor family protein [Populus trichocarpa])

HSP 1 Score: 334.3 bits (856), Expect = 1.5e-88
Identity = 165/203 (81.28%), Postives = 183/203 (90.15%), Query Frame = 1 

Query: 13  VLLLATSAADIDLLQDICVADLASGIKVNGFVCKTNISATDFFFDGLANPGLTNTTSGAV 72
           ++L+AT +AD DLLQD+CVADL+SG+KVNGF CK NISA DFFF GLA PGLTN T G++
Sbjct: 18  LVLVATVSADPDLLQDVCVADLSSGVKVNGFTCKENISAEDFFFAGLAKPGLTNNTFGSL 77

Query: 73  VTGANVQKIPGLNTLGVSLARIDYAPGGLNPPHTHPRATEIVFVLEGELDVGFITTGNVL 132
           VT ANVQKIPGLNTLGVS++RIDYAPGGLNPPHTHPRATE+VFVLEG+LDVGFITT NVL
Sbjct: 78  VTAANVQKIPGLNTLGVSMSRIDYAPGGLNPPHTHPRATEMVFVLEGQLDVGFITTANVL 137

Query: 133 ISKSIKKGEIFVFPKGLVHFQKNNGKDAAAVVAAFNSQLPGTQSIATTLFATTPSVPNDV 192
           ISK+IK GE FVFPKGLVHFQKNNG+ +AAV+AAFNSQLPGTQSIA TLFA  P VP+ V
Sbjct: 138 ISKTIKVGETFVFPKGLVHFQKNNGQVSAAVIAAFNSQLPGTQSIAATLFAAQPPVPDHV 197

Query: 193 LTKAFQVGTKEVEKIKSRFAPKN 216
           LTKAFQVGTKEV KIKSRFAPKN
Sbjct: 198 LTKAFQVGTKEVRKIKSRFAPKN 220

The following BLAST results are available for this feature:
BLAST of Cla005136 vs. Swiss-Prot
Match NameE-valueIdentityDescription
GL52_ORYSJ1.2e-8071.98Germin-like protein 5-1 OS=Oryza sativa subsp. japonica GN=Os05g0277500 PE=2 SV=... [more]
GL24_ARATH3.8e-7969.19Germin-like protein subfamily 2 member 4 OS=Arabidopsis thaliana GN=GLP10 PE=2 S... [more]
GL21_ARATH2.4e-7866.82Germin-like protein subfamily 2 member 1 OS=Arabidopsis thaliana GN=GLP4 PE=2 SV... [more]
RHRE_PEA4.2e-7871.43Rhicadhesin receptor OS=Pisum sativum GN=GER1 PE=1 SV=2[more]
NEC1_NICLS2.3e-7670.10Nectarin-1 OS=Nicotiana langsdorffii x Nicotiana sanderae GN=NECI PE=1 SV=1[more]
BLAST of Cla005136 vs. TrEMBL
Match NameE-valueIdentityDescription
Q0MYQ7_VITVI5.1e-9178.70Germin-like protein 2 OS=Vitis vinifera GN=VIT_14s0060g00120 PE=2 SV=1[more]
A0A0A0LK24_CUCSA9.6e-9081.73Uncharacterized protein OS=Cucumis sativus GN=Csa_2G035370 PE=3 SV=1[more]
A9PF73_POPTR1.1e-8881.28Rhicadhesin receptor family protein OS=Populus trichocarpa GN=POPTR_0005s00310g ... [more]
B9RFS5_RICCO1.8e-8876.64Rhicadhesin receptor, putative OS=Ricinus communis GN=RCOM_1437110 PE=3 SV=1[more]
A0A022R6S0_ERYGU1.8e-8877.40Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a013478mg PE=3 SV=1[more]
BLAST of Cla005136 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|526118000|ref|NP_001267914.1|7.3e-9178.70germin-like protein 2 precursor [Vitis vinifera][more]
gi|1009116464|ref|XP_015874786.1|4.8e-9077.78PREDICTED: germin-like protein subfamily 2 member 1 [Ziziphus jujuba][more]
gi|449453984|ref|XP_004144736.1|1.4e-8981.73PREDICTED: germin-like protein 5-1 [Cucumis sativus][more]
gi|659070031|ref|XP_008453001.1|1.4e-8982.21PREDICTED: germin-like protein 5-1 [Cucumis melo][more]
gi|566168527|ref|XP_006382248.1|1.5e-8881.28rhicadhesin receptor family protein [Populus trichocarpa][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001929Germin
IPR006045Cupin_1
IPR011051RmlC_Cupin_sf
IPR014710RmlC-like_jellyroll
IPR019780Germin_Mn-BS
Vocabulary: Molecular Function
TermDefinition
GO:0030145manganese ion binding
GO:0045735nutrient reservoir activity
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0046487 glyoxylate metabolic process
biological_process GO:2000280 regulation of root development
biological_process GO:0006412 translation
biological_process GO:0043039 tRNA aminoacylation
biological_process GO:0006418 tRNA aminoacylation for protein translation
biological_process GO:0019430 removal of superoxide radicals
biological_process GO:0010497 plasmodesmata-mediated intercellular transport
biological_process GO:0033609 oxalate metabolic process
cellular_component GO:0005576 extracellular region
cellular_component GO:0009506 plasmodesma
cellular_component GO:0005618 cell wall
cellular_component GO:0005737 cytoplasm
molecular_function GO:0004812 aminoacyl-tRNA ligase activity
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0016876 ligase activity, forming aminoacyl-tRNA and related compounds
molecular_function GO:0005524 ATP binding
molecular_function GO:0004784 superoxide dismutase activity
molecular_function GO:0045735 nutrient reservoir activity
molecular_function GO:0030145 manganese ion binding
molecular_function GO:0046564 oxalate decarboxylase activity
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
WMU08093watermelon EST collection version 2.0transcribed_cluster
WMU16972watermelon unigene v2 vs TrEMBLtranscribed_cluster
WMU57744watermelon EST collection version 2.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla005136Cla005136.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
WMU16972WMU16972transcribed_cluster
WMU08093WMU08093transcribed_cluster
WMU57744WMU57744transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001929GerminPRINTSPR00325GERMINcoord: 105..125
score: 8.9E-27coord: 135..155
score: 8.9E-27coord: 168..183
score: 8.9
IPR006045Cupin 1PFAMPF00190Cupin_1coord: 59..204
score: 2.5
IPR006045Cupin 1SMARTSM00835Cupin_1_3coord: 57..205
score: 1.0
IPR011051RmlC-like cupin domainunknownSSF51182RmlC-like cupinscoord: 24..212
score: 1.03
IPR014710RmlC-like jelly roll foldGENE3DG3DSA:2.60.120.10coord: 22..213
score: 3.3
IPR019780Germin, manganese binding sitePROSITEPS00725GERMINcoord: 100..113
scor
NoneNo IPR availablePANTHERPTHR31238FAMILY NOT NAMEDcoord: 2..215
score: 3.2E
NoneNo IPR availablePANTHERPTHR31238:SF39GERMIN-LIKE PROTEIN SUBFAMILY 2 MEMBER 1-RELATEDcoord: 2..215
score: 3.2E