Lsi05G021990 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi05G021990
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionSquamosa promoter-binding-like protein 7
Locationchr05 : 28564386 .. 28567278 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTAGAAAGAAAGCATATAGGATTTAGAGAGGTAGAATTAAGGAAAAATGAAAGGAAGTCACATATTGAGGATATTTGTTAGTTGTTATGTTAATGGTAAGTGGTAAGGCATTTGTTGTCGCCAGTTTCCCCCTGTACTGGCCTCTACTCTCTCTGTCTGTGCAATGGTGCAGCAGCTTTTCTTCCACTCACTTTAACCCTTCCCATTGGGGATTTACAATTATATCACAGAAGACTCTTCACTGCTTCTCTCTCTCTGACTCTGTTTTTCCCGACATCAACCTCTTCTTTCCCTCTTTTGGTATAAATTCCCCAACCCCATCTCCCTCTTTCTCCTGTCACCATAACACAACCCAATCCCACCATTATTCACTGCTCTCTTTTCCTTGAACTTCCTTCCTTCCTTCCTCCCTCTTTTCCTGCCAATTCCTAAAATGGAGATGGAGATTTGCGGCAACTTGATGGGACACTCCAATCCCACCAGAGACCATAATCCCAACGCCACTAATCTTTCCTGGCCCAATACTAACATTTGGGAGCTCAATTCCGAACCCATCTCCTCCTCTGCCCACGCCCTCTGGCTCCAACCCCACGACGCCGGCCACCGCCAGTTTCTCTACGCCGGAGACCATCAGCCCCCCCATTTCCACCCAGACCCCCATCTCATGTGCTTGAAGCTCGGCAAGAGGCACTACTTCGAGGACGCCAACGCGCCCTCCGTCGTCGGAGGTTTCGCCGCCGTGGGGAAGAGAGGGAAGGCGTTTTACGGCGGCGATGGAGGGGGTTACGGGCCAGTTCCGAGCAGTGTACCCCGGTGCCAAGTGGAGGGATGCCACGTGGCGCTGGTGAACGCTAAGGACTACCACCGTAGGCATAGGGTTTGTGAGATGCACTCAAAGGCTCCCAAAGTCGTGGTGGTTGGCTTAGAGCAGAGGTTCTGCCAGCAGTGTAGCAGGTCCTCTCCCACTTATTTTGGAGCACGAATGGGTTATTATAGTCTACATGTTATAATAATATATAGTTAGAGTTAAAACTATTTTAATCTAGATTACAATATTCTGTGTTTAGTATATAAGTCTTGGCAGAAAATAGTAAACACTTAACCAAGTGAGAAAGTAAAGAGTGATTTGAAATAATAATACTATCGTTTTAATTATACATAGGTTACAATAGTTGGAAATAACAACTATTATAATTGGAGAAATTTCTTTTTAGTTTTTACATGATACCATAATTAAATTTTATTTATGAATACTAAATAACAACAGTTGGGTAATTTTTTTAGGTTTCATGTGATTTCTGAATTTGATGATTCGAAGAGGAGCTGTAGGAGGAGACTAGCAGGCCACAATGAGAGAAGAAGGAAGAGCTCTCATGAATCTGTTGCAGCAAGGAACTGCAACCAAGGTACCAAGTTCCTTTATTTTTCACTTCAATTATATTCTTGATGACCGAGATGAACATGGACATAGTTCAACAATAATTGACATATATCTTTCTTTTTGTAAAAGTTTTATTATCATATTATTTTGGGTGAGAGGGTTTTGTAAGTATTGTGTGTAATAAGAAAGTTGAGGTGAAAAGAGGTTGGAAATGGAAGGTATAAACTAAAAAAGTATAGAAGTGAACATGGAATTTGAACTTTAATTGTTGGATAAAGCATGTTGATGAATAATGATTTAAGAAGGAACGCACTTACTCAATCATGGCTTTTCAGAAGAATTGGAGAGTAGCTGTTCCCCAATTCCCAATTATTATCTTTTGTTCTTTTGTACAACAAGGCAACGAATAAAAGGAGACGAAGAAGAAAGACGATTTTTAGTTTCCTCCTTCTTCAACATCAAACTTTTTAAACTGAGAAAGGGACACAAAGAAAAGGACTCCTCTTCATATTTTTCAATTTACTTTTTATCACCTTTAAACTTTACTGCCTTAATTATTCCCCTTTTTTAAATAAGCGTTTATTCATTTTATTAACCACAATTTATTCGCTGTTTTAACTCTATACAATATTTGTAATTATTTGATTTTTAGGTTTTCATACCAATGTTTTATCAAAACTAAAATAAAAATCGTTTTTAAAAATTTGTTTTTACTTTGGTAACTTCACTAAAAATTTAAATGATTCTTCAAGGAATATGAAAACTTGAGGAGGAAACAAATAGACGTATAAAAACACGTAGAACTAAGTTTAATTAAAAAAAAAATTACAATCAAACTAATTTTGCCCTAAAAATTGGGGGAAATTGCAGAAAACAAGTCGATGACAGGTGGAATTGCATGCATACCATCCCCGACGGGACGTGCTCTCTCTCTTCTGTCATCGAAGAACGAATCATGGGCCACCTCCTCGGAGCTCTCCCTGAGGTCGAGCGCAGCGCTCCGGGAACTTATAGCGGAGAATCGCGCCGCCATCCTCGCTCGGCAGTTGATTCTCGACAGAGATTGGCATTCAAACCACACGGTGGCGGCGGATGATTTCGGAGGATGCGTCGTTGGATTCCATCAGCAGCAGGGATTGTATTGGGAGCAGCAGCAACAGAGCTGGGAGAGGATGAATGAAAATGGCGGTTCGCACGTGACGCTGGATCTGATGCAGGCGCCGAGCACGGCGTTTGGGCTGCTGTCTGTGAGAGGGAAATCGAAAGAAGAAGATGAAGAATGTTGCGAGCTATGGAACTCCTTCAACGATCACGACTCTCATGTCGTTTAAAATTATATTATAATTTATAATTATAAATGTATATGGTTGTGGAATCATTAACATTTGGAAGCTCTATAATTCTTTTTTCATCACTCGCATCATTTCTTTTCTTTTCCCACCTATTTTTCTACACTTTTTTTATTTTTCATTTTTCATTTTTCATTTTTGTTGCTGATGAATTCAACCATTG

mRNA sequence

TTAGAAAGAAAGCATATAGGATTTAGAGAGGTAGAATTAAGGAAAAATGAAAGGAAGTCACATATTGAGGATATTTGTTAGTTGTTATGTTAATGGTAAGTGGTAAGGCATTTGTTGTCGCCAGTTTCCCCCTGTACTGGCCTCTACTCTCTCTGTCTGTGCAATGGTGCAGCAGCTTTTCTTCCACTCACTTTAACCCTTCCCATTGGGGATTTACAATTATATCACAGAAGACTCTTCACTGCTTCTCTCTCTCTGACTCTGTTTTTCCCGACATCAACCTCTTCTTTCCCTCTTTTGGTATAAATTCCCCAACCCCATCTCCCTCTTTCTCCTGTCACCATAACACAACCCAATCCCACCATTATTCACTGCTCTCTTTTCCTTGAACTTCCTTCCTTCCTTCCTCCCTCTTTTCCTGCCAATTCCTAAAATGGAGATGGAGATTTGCGGCAACTTGATGGGACACTCCAATCCCACCAGAGACCATAATCCCAACGCCACTAATCTTTCCTGGCCCAATACTAACATTTGGGAGCTCAATTCCGAACCCATCTCCTCCTCTGCCCACGCCCTCTGGCTCCAACCCCACGACGCCGGCCACCGCCAGTTTCTCTACGCCGGAGACCATCAGCCCCCCCATTTCCACCCAGACCCCCATCTCATGTGCTTGAAGCTCGGCAAGAGGCACTACTTCGAGGACGCCAACGCGCCCTCCGTCGTCGGAGGTTTCGCCGCCGTGGGGAAGAGAGGGAAGGCGTTTTACGGCGGCGATGGAGGGGGTTACGGGCCAGTTCCGAGCAGTGTACCCCGGTGCCAAGTGGAGGGATGCCACGTGGCGCTGGTGAACGCTAAGGACTACCACCGTAGGCATAGGGTTTGTGAGATGCACTCAAAGGCTCCCAAAGTCGTGGTGGTTGGCTTAGAGCAGAGGTTCTGCCAGCAGTGTAGCAGGTTTCATGTGATTTCTGAATTTGATGATTCGAAGAGGAGCTGTAGGAGGAGACTAGCAGGCCACAATGAGAGAAGAAGGAAGAGCTCTCATGAATCTGTTGCAGCAAGGAACTGCAACCAAGGGTTTTGTAAGTATTGTGTGTAATAAGAAAGTTGAGGTGAAAAGAGAAAACAAGTCGATGACAGGTGGAATTGCATGCATACCATCCCCGACGGGACGTGCTCTCTCTCTTCTGTCATCGAAGAACGAATCATGGGCCACCTCCTCGGAGCTCTCCCTGAGGTCGAGCGCAGCGCTCCGGGAACTTATAGCGGAGAATCGCGCCGCCATCCTCGCTCGGCAGTTGATTCTCGACAGAGATTGGCATTCAAACCACACGGTGGCGGCGGATGATTTCGGAGGATGCGTCGTTGGATTCCATCAGCAGCAGGGATTGTATTGGGAGCAGCAGCAACAGAGCTGGGAGAGGATGAATGAAAATGGCGGTTCGCACGTGACGCTGGATCTGATGCAGGCGCCGAGCACGGCGTTTGGGCTGCTGTCTGTGAGAGGGAAATCGAAAGAAGAAGATGAAGAATGTTGCGAGCTATGGAACTCCTTCAACGATCACGACTCTCATGTCGTTTAAAATTATATTATAATTTATAATTATAAATGTATATGGTTGTGGAATCATTAACATTTGGAAGCTCTATAATTCTTTTTTCATCACTCGCATCATTTCTTTTCTTTTCCCACCTATTTTTCTACACTTTTTTTATTTTTCATTTTTCATTTTTCATTTTTGTTGCTGATGAATTCAACCATTG

Coding sequence (CDS)

ATGAGAGAAGAAGGAAGAGCTCTCATGAATCTGTTGCAGCAAGGAACTGCAACCAAGGGTTTTGTAAGTATTGTGTGTAATAAGAAAGTTGAGGTGAAAAGAGAAAACAAGTCGATGACAGGTGGAATTGCATGCATACCATCCCCGACGGGACGTGCTCTCTCTCTTCTGTCATCGAAGAACGAATCATGGGCCACCTCCTCGGAGCTCTCCCTGAGGTCGAGCGCAGCGCTCCGGGAACTTATAGCGGAGAATCGCGCCGCCATCCTCGCTCGGCAGTTGATTCTCGACAGAGATTGGCATTCAAACCACACGGTGGCGGCGGATGATTTCGGAGGATGCGTCGTTGGATTCCATCAGCAGCAGGGATTGTATTGGGAGCAGCAGCAACAGAGCTGGGAGAGGATGAATGAAAATGGCGGTTCGCACGTGACGCTGGATCTGATGCAGGCGCCGAGCACGGCGTTTGGGCTGCTGTCTGTGAGAGGGAAATCGAAAGAAGAAGATGAAGAATGTTGCGAGCTATGGAACTCCTTCAACGATCACGACTCTCATGTCGTTTAA

Protein sequence

MREEGRALMNLLQQGTATKGFVSIVCNKKVEVKRENKSMTGGIACIPSPTGRALSLLSSKNESWATSSELSLRSSAALRELIAENRAAILARQLILDRDWHSNHTVAADDFGGCVVGFHQQQGLYWEQQQQSWERMNENGGSHVTLDLMQAPSTAFGLLSVRGKSKEEDEECCELWNSFNDHDSHVV
Homology
[Close]
BLAST of Lsi05G021990 vs. TrEMBL
Match: A0A0A0L8C0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G117960 PE=4 SV=1)

HSP 1 Score: 250.4 bits (638), Expect = 1.8e-63
Identity = 133/153 (86.93%), Postives = 135/153 (88.24%), Query Frame = 1 

Query: 35  ENKSMTGGIACIPSPTGRALSLLSSKNESWATSSELSLRSSAALRELIAENRAAILARQL 94
           ENKSMT GIA +PSPTGRALSLLSSKNESWA SSELS RSSAALRELIAENRAAILARQL
Sbjct: 190 ENKSMTNGIAYVPSPTGRALSLLSSKNESWANSSELSQRSSAALRELIAENRAAILARQL 249

Query: 95  ILDRDWHSNHTVAADDFGGCVVGFHQQQGLYWEQQQQSWERMNENGGSHVTLDLMQAPST 154
           ILDRDWH NH    D  GG  VGF QQQGLY E QQ SWERMNENGGSHVTLDLMQAPS+
Sbjct: 250 ILDRDWHPNHGGTDDFGGGGGVGF-QQQGLYCE-QQHSWERMNENGGSHVTLDLMQAPSS 309

Query: 155 AFGLLSVRGKSKEEDEECCELWNSFNDHDSHVV 188
           AFGLLSVRGKSKEEDEECCELWNSFNDHD HVV
Sbjct: 310 AFGLLSVRGKSKEEDEECCELWNSFNDHDPHVV 340

[Close]
BLAST of Lsi05G021990 vs. TrEMBL
Match: F6GV74_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0021g02290 PE=4 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 3.6e-40
Identity = 104/157 (66.24%), Postives = 116/157 (73.89%), Query Frame = 1 

Query: 36  NKSMTGGIACIPSPTGRALSLLSSKNESWATSSELSLRSSAALRELIAENRAAILARQLI 95
           NK MTG  A + SPTGRALSLLSSK++SW +S+ELSLRSSAALRELIAENRAAILARQLI
Sbjct: 250 NKLMTGRFAYLSSPTGRALSLLSSKSDSWVSSAELSLRSSAALRELIAENRAAILARQLI 309

Query: 96  LDRDWHSNHTVAADDFGGCVVGF-----HQQQGLYWEQQQQSWERMNENGGSHVTLDLMQ 155
           LDRDWH +H    +D GG   G      HQ Q        +SWER +E  G HVTLDLMQ
Sbjct: 310 LDRDWHWHHH-GMEDSGGEQPGSDSLMPHQHQMF---PGSRSWERFHEANG-HVTLDLMQ 369

Query: 156 APSTAFGLLSVRGKSKEEDEECCELWNSFNDHDSHVV 188
           APS+AFGLLSVR KSKEE+EEC ELWNS     +HVV
Sbjct: 370 APSSAFGLLSVREKSKEEEEECSELWNSL--EGTHVV 399

[Close]
BLAST of Lsi05G021990 vs. TrEMBL
Match: A0A061DVD0_THECC (Squamosa promoter-binding-like protein 10, putative OS=Theobroma cacao GN=TCM_005620 PE=4 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 2.2e-34
Identity = 92/158 (58.23%), Postives = 107/158 (67.72%), Query Frame = 1 

Query: 34  RENKSMTGGIACIPSPTGRALSLLSSKNESWATSSELSLRSSAALRELIAENRAAILARQ 93
           ++NK MTG    + SPTGRALSLLSS+ +SW  SS+LS RSSAALRELIAENRAAILARQ
Sbjct: 277 QDNKLMTGRFPYLSSPTGRALSLLSSRADSWIFSSDLSSRSSAALRELIAENRAAILARQ 336

Query: 94  LILDRDWHSNHTVAAD----DFGGCVVGFHQQQGLYWEQQQQSWERMNENGGSHVTLDLM 153
           LILDRDWH +H    D      G   V   Q   L    +   W+R     G+ VTLDLM
Sbjct: 337 LILDRDWHLHHHAMEDLGDAQPGSSSVAVQQHPSL---PEPHGWDRFPVT-GAQVTLDLM 396

Query: 154 QAPSTAFGLLSVRGKSKEEDEECCELWNSFNDHDSHVV 188
           QA S+AF +LSVRGK+KEE+EEC ELWNS     +HVV
Sbjct: 397 QASSSAFEMLSVRGKTKEEEEECSELWNSL--QGTHVV 428

[Close]
BLAST of Lsi05G021990 vs. TrEMBL
Match: W9R3S1_9ROSA (Squamosa promoter-binding-like protein 7 OS=Morus notabilis GN=L484_021787 PE=4 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 8.0e-32
Identity = 87/153 (56.86%), Postives = 100/153 (65.36%), Query Frame = 1 

Query: 39  MTGGIACIPSPTGRALSLLSSKNESWATSSELSLRSSAALRELIAENRAAILARQLILDR 98
           M GG   + SPTGRALSLLSSK +SW   S+LS RSSAALRELIAENRAAILARQL L+R
Sbjct: 276 MGGGFPYLTSPTGRALSLLSSKTDSWVPPSDLSSRSSAALRELIAENRAAILARQLFLER 335

Query: 99  D-WHSNH----------TVAADDFG-GCVVGFHQQQGLYWEQQQQSWERMNENGGSHVTL 158
           D WH +H          T  A   G G  +  H  Q          WER+NE+  +HVTL
Sbjct: 336 DTWHLHHRNHHQQGEDLTSEAQQGGFGSNIEPHHHQMFPEPPAHGGWERINES-AAHVTL 395

Query: 159 DLMQAPSTAFGLLSVRGKSKEEDEECCELWNSF 180
           DLMQAPS AFG +  RGK+K E+EEC +LWNSF
Sbjct: 396 DLMQAPSPAFGFVPARGKAKAEEEECSDLWNSF 427

[Close]
BLAST of Lsi05G021990 vs. TrEMBL
Match: A0A0B0P0A8_GOSAR (Squamosa promoter-binding-like protein 7 OS=Gossypium arboreum GN=F383_25556 PE=4 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 1.0e-31
Identity = 81/145 (55.86%), Postives = 95/145 (65.52%), Query Frame = 1 

Query: 34  RENKSMTGGIACIPSPTGRALSLLSSKNESWATSSELSLRSSAALRELIAENRAAILARQ 93
           R+NK MTG    + SPTGRALSLLSSK +SW + S LS RSSAALRELI ENRAA+LARQ
Sbjct: 206 RDNKPMTGSFPYVSSPTGRALSLLSSKVDSWISPSNLSTRSSAALRELIVENRAAVLARQ 265

Query: 94  LILDRDWHSNHTVAADDFGGCVVGFHQQQGLYWEQQQQSWERMNENGGSHVTLDLMQAPS 153
           L+L+RDWH             +V  H             W+      G  VTLDLMQA +
Sbjct: 266 LVLERDWHYIGEPQPAGSNPILVQHHSM------LDPHGWDFPFPETGGQVTLDLMQASN 325

Query: 154 TAFGLLSVRGKSKEEDEECCELWNS 179
           TAFG+LSVRGK+KEE+EEC ELW+S
Sbjct: 326 TAFGMLSVRGKTKEEEEECSELWHS 344

[Close]
BLAST of Lsi05G021990 vs. NCBI nr
Match: gi|659074781|ref|XP_008437792.1| (PREDICTED: squamosa promoter-binding-like protein 7 isoform X2 [Cucumis melo])

HSP 1 Score: 258.5 bits (659), Expect = 9.3e-66
Identity = 137/154 (88.96%), Postives = 140/154 (90.91%), Query Frame = 1 

Query: 34  RENKSMTGGIACIPSPTGRALSLLSSKNESWATSSELSLRSSAALRELIAENRAAILARQ 93
           +ENKSMT GIA +PSPTGRALSLLSSKNESWA SSELS RSSAALRELIAENRAAILARQ
Sbjct: 188 QENKSMTNGIAYVPSPTGRALSLLSSKNESWANSSELSQRSSAALRELIAENRAAILARQ 247

Query: 94  LILDRDWHSNHTVAADDFGGCVVGFHQQQGLYWEQQQQSWERMNENGGSHVTLDLMQAPS 153
           LILDRDWHSNH  A DDFGG  VGF QQQGLY E QQ SWERMNENGGSHVTLDLMQAPS
Sbjct: 248 LILDRDWHSNHG-ATDDFGGGGVGF-QQQGLYCE-QQHSWERMNENGGSHVTLDLMQAPS 307

Query: 154 TAFGLLSVRGKSKEEDEECCELWNSFNDHDSHVV 188
           +AFGLLSVRGKSKEEDEECCELWNSFNDHD HVV
Sbjct: 308 SAFGLLSVRGKSKEEDEECCELWNSFNDHDPHVV 338

[Close]
BLAST of Lsi05G021990 vs. NCBI nr
Match: gi|659074779|ref|XP_008437791.1| (PREDICTED: squamosa promoter-binding-like protein 7 isoform X1 [Cucumis melo])

HSP 1 Score: 258.1 bits (658), Expect = 1.2e-65
Identity = 137/153 (89.54%), Postives = 139/153 (90.85%), Query Frame = 1 

Query: 35  ENKSMTGGIACIPSPTGRALSLLSSKNESWATSSELSLRSSAALRELIAENRAAILARQL 94
           ENKSMT GIA +PSPTGRALSLLSSKNESWA SSELS RSSAALRELIAENRAAILARQL
Sbjct: 190 ENKSMTNGIAYVPSPTGRALSLLSSKNESWANSSELSQRSSAALRELIAENRAAILARQL 249

Query: 95  ILDRDWHSNHTVAADDFGGCVVGFHQQQGLYWEQQQQSWERMNENGGSHVTLDLMQAPST 154
           ILDRDWHSNH  A DDFGG  VGF QQQGLY E QQ SWERMNENGGSHVTLDLMQAPS+
Sbjct: 250 ILDRDWHSNHG-ATDDFGGGGVGF-QQQGLYCE-QQHSWERMNENGGSHVTLDLMQAPSS 309

Query: 155 AFGLLSVRGKSKEEDEECCELWNSFNDHDSHVV 188
           AFGLLSVRGKSKEEDEECCELWNSFNDHD HVV
Sbjct: 310 AFGLLSVRGKSKEEDEECCELWNSFNDHDPHVV 339

[Close]
BLAST of Lsi05G021990 vs. NCBI nr
Match: gi|778676680|ref|XP_011650639.1| (PREDICTED: squamosa promoter-binding-like protein 7 isoform X2 [Cucumis sativus])

HSP 1 Score: 251.1 bits (640), Expect = 1.5e-63
Identity = 133/154 (86.36%), Postives = 136/154 (88.31%), Query Frame = 1 

Query: 34  RENKSMTGGIACIPSPTGRALSLLSSKNESWATSSELSLRSSAALRELIAENRAAILARQ 93
           +ENKSMT GIA +PSPTGRALSLLSSKNESWA SSELS RSSAALRELIAENRAAILARQ
Sbjct: 188 QENKSMTNGIAYVPSPTGRALSLLSSKNESWANSSELSQRSSAALRELIAENRAAILARQ 247

Query: 94  LILDRDWHSNHTVAADDFGGCVVGFHQQQGLYWEQQQQSWERMNENGGSHVTLDLMQAPS 153
           LILDRDWH NH    D  GG  VGF QQQGLY EQQ  SWERMNENGGSHVTLDLMQAPS
Sbjct: 248 LILDRDWHPNHGGTDDFGGGGGVGF-QQQGLYCEQQH-SWERMNENGGSHVTLDLMQAPS 307

Query: 154 TAFGLLSVRGKSKEEDEECCELWNSFNDHDSHVV 188
           +AFGLLSVRGKSKEEDEECCELWNSFNDHD HVV
Sbjct: 308 SAFGLLSVRGKSKEEDEECCELWNSFNDHDPHVV 339

[Close]
BLAST of Lsi05G021990 vs. NCBI nr
Match: gi|449431972|ref|XP_004133774.1| (PREDICTED: squamosa promoter-binding-like protein 7 isoform X1 [Cucumis sativus])

HSP 1 Score: 250.4 bits (638), Expect = 2.5e-63
Identity = 133/153 (86.93%), Postives = 135/153 (88.24%), Query Frame = 1 

Query: 35  ENKSMTGGIACIPSPTGRALSLLSSKNESWATSSELSLRSSAALRELIAENRAAILARQL 94
           ENKSMT GIA +PSPTGRALSLLSSKNESWA SSELS RSSAALRELIAENRAAILARQL
Sbjct: 190 ENKSMTNGIAYVPSPTGRALSLLSSKNESWANSSELSQRSSAALRELIAENRAAILARQL 249

Query: 95  ILDRDWHSNHTVAADDFGGCVVGFHQQQGLYWEQQQQSWERMNENGGSHVTLDLMQAPST 154
           ILDRDWH NH    D  GG  VGF QQQGLY E QQ SWERMNENGGSHVTLDLMQAPS+
Sbjct: 250 ILDRDWHPNHGGTDDFGGGGGVGF-QQQGLYCE-QQHSWERMNENGGSHVTLDLMQAPSS 309

Query: 155 AFGLLSVRGKSKEEDEECCELWNSFNDHDSHVV 188
           AFGLLSVRGKSKEEDEECCELWNSFNDHD HVV
Sbjct: 310 AFGLLSVRGKSKEEDEECCELWNSFNDHDPHVV 340

[Close]
BLAST of Lsi05G021990 vs. NCBI nr
Match: gi|731420333|ref|XP_010661348.1| (PREDICTED: squamosa promoter-binding-like protein 7 isoform X2 [Vitis vinifera])

HSP 1 Score: 172.9 bits (437), Expect = 5.1e-40
Identity = 104/157 (66.24%), Postives = 116/157 (73.89%), Query Frame = 1 

Query: 36  NKSMTGGIACIPSPTGRALSLLSSKNESWATSSELSLRSSAALRELIAENRAAILARQLI 95
           NK MTG  A + SPTGRALSLLSSK++SW +S+ELSLRSSAALRELIAENRAAILARQLI
Sbjct: 249 NKLMTGRFAYLSSPTGRALSLLSSKSDSWVSSAELSLRSSAALRELIAENRAAILARQLI 308

Query: 96  LDRDWHSNHTVAADDFGGCVVGF-----HQQQGLYWEQQQQSWERMNENGGSHVTLDLMQ 155
           LDRDWH +H    +D GG   G      HQ Q        +SWER +E  G HVTLDLMQ
Sbjct: 309 LDRDWHWHHH-GMEDSGGEQPGSDSLMPHQHQMF---PGSRSWERFHEANG-HVTLDLMQ 368

Query: 156 APSTAFGLLSVRGKSKEEDEECCELWNSFNDHDSHVV 188
           APS+AFGLLSVR KSKEE+EEC ELWNS     +HVV
Sbjct: 369 APSSAFGLLSVREKSKEEEEECSELWNSL--EGTHVV 398

The following BLAST results are available for this feature:
BLAST of Lsi05G021990 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Lsi05G021990 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L8C0_CUCSA1.8e-6386.93Uncharacterized protein OS=Cucumis sativus GN=Csa_3G117960 PE=4 SV=1[more]
F6GV74_VITVI3.6e-4066.24Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0021g02290 PE=4 SV=... [more]
A0A061DVD0_THECC2.2e-3458.23Squamosa promoter-binding-like protein 10, putative OS=Theobroma cacao GN=TCM_00... [more]
W9R3S1_9ROSA8.0e-3256.86Squamosa promoter-binding-like protein 7 OS=Morus notabilis GN=L484_021787 PE=4 ... [more]
A0A0B0P0A8_GOSAR1.0e-3155.86Squamosa promoter-binding-like protein 7 OS=Gossypium arboreum GN=F383_25556 PE=... [more]
BLAST of Lsi05G021990 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of Lsi05G021990 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659074781|ref|XP_008437792.1|9.3e-6688.96PREDICTED: squamosa promoter-binding-like protein 7 isoform X2 [Cucumis melo][more]
gi|659074779|ref|XP_008437791.1|1.2e-6589.54PREDICTED: squamosa promoter-binding-like protein 7 isoform X1 [Cucumis melo][more]
gi|778676680|ref|XP_011650639.1|1.5e-6386.36PREDICTED: squamosa promoter-binding-like protein 7 isoform X2 [Cucumis sativus][more]
gi|449431972|ref|XP_004133774.1|2.5e-6386.93PREDICTED: squamosa promoter-binding-like protein 7 isoform X1 [Cucumis sativus][more]
gi|731420333|ref|XP_010661348.1|5.1e-4066.24PREDICTED: squamosa promoter-binding-like protein 7 isoform X2 [Vitis vinifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005634 nucleus
molecular_function GO:0003677 DNA binding
molecular_function GO:0046872 metal ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi05G021990.1Lsi05G021990.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR31251FAMILY NOT NAMEDcoord: 36..187
score: 4.8
NoneNo IPR availablePANTHERPTHR31251:SF15SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 3coord: 36..187
score: 4.8