Carg24168 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg24168
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Squamosa promoter binding-like protein
Location	Cucurbita_argyrosperma_scaffold_221 : 95911 .. 98035 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATAAAAATACAATATTTTAAAAAATAATCTCATAAATACATATATAGTAGGAGTGGTCACAATCACAATCTCTGCTGTGTTTAGGAGATCTTGATATGGACCCCACCTTCTACACGTGTATGGCCCATCCCCTTCCCTATCCATTCTTCACAGTCACAAATTTTTTTAATCCTTTTTAATAGTTAAATTAAAAATTTTCACTTATTTAAAATTTAATTCAAGTATTTTTAGCCCTCTGTTTCCCTCTGTCTCTGTCTCGGTTTTCTCCGACACCAACCTCTTCTTTACTTCTTTTGGTATAAATTCCCCCAACCCCTTATGCCTATTTCTTCGCCCACCATTTCTAACCTCTCTTCTTCCTTTCCTTCTTTTGCTGCAGTTCTTGCAGTTCTTGCAGTTCTTGAGATGGAGATTTGTGGCAATTTGATTGGACAGTCCAATGCTGGAAGAGACCAAGCTGCCAACCCCACTACCGTTTGGGAGCACCTCAATTCCTCTCGCTTCCACTTGGATTGGGTCACTGCCAACTCCACTCACGGCGACGCTCACCAACACCACCAGTGTCTCTTCGCTGGAGATCACCATCAGGGCGGCCATTTCCACCGGGACCCACATCTCATGTGCTTGAAGCTCGGCAAGAGGCACTACTTTGAGGACGCCACTGCGGCGTCCGTCGTGGGGAAGAGAGGGAAGCCGTTGTACAGTACAGTTCCGACTAGTGTTCCTCGGTGTCAAGTGGAAGGGTGTCATGTGGCGCTGGTGAATGCTAAGGACTACCACCGTAGGCATAGGGTCTGCGAGATGCACTCCAAGGCTCCCAAAGTTGTGGTTGTTGGCTTAGAACAGAGGTTCTGCCAGCAGTGTAGCAGGTGCTGCGGAATTTCAAAGAATAATTTCCACATTAATTTCATTTTAACACAATTAATAACAATAACAAGAACAACAACAATTGGGTTTCAGGTTTCATGTGATTTCTGAGTTTGATGATTCAAAGAGGAGCTGTAGGAGGAGATTAGCAGGGCACAATGAGAGACGAAGAAAGAGTTCTCAGGAATCTGTAGCAGCAAGGAACTGGTCCGGAGGTACCCAATTCCCTAATTTTTCATTTCAATTCATATCAATCAACAATCAAAAATGTGTTCTGAATCATTGTTTTGATCAGTTACTGATGGAAGTACAAGAACAGACAGAAAAAAGAGCATGGAATTTGAACTTTTTGTTTTTTTCTACAATAAAGCATGCTCATGAACAGTCATGAATATAGCAATTCAACTTTAAGAACCACACTTAACCCATCGCTTTACAGAACAGTTCTTATCCCCAATTCCTAATTATTATCTTTTGTTCTTATCCCCAACTTTAAGTAGAAAGCCGATTTTTTAGTTCCCTTGTTCAACATCGAAGTCTGAAAATCAGAAAAGAACTGCTCTTAATATTTCCAGAATTGATTTTATGAACTTCAATTAAAAGCTGTGATTAAAATGATTTTTAGTTTCCTTGTTATTAATTATTTCGAAGCTAGGGTTCTCTATTTGAAGTAAAATTCAGAATGACGACAGTTTGTTATTCAATTGACTATAACAGAAATTGAATCAATTTTGCCCTAAAAATTGGGGGAAATTGCAGAAAACAAGTCGAGGACAGGTAAGATTGCATACATACCATCGCCGACGGGACGTGCTCTCTCTCTTCTGTCATCGAAGAACGAATCGTGGGCGACCTCATCGGAGCTATCGCTGAGGTCGAGCGCAGCGCTCCGAGAACTGATAGCGGAGAATCGCGCGGCCATTCTGGCTCGGCAGCTGAATCTGGAGAGAGATTGGCACTCAAACCACACAGGGACGGCGGATGATTTCGGAAGCGGAGGCGTTGGATTGGAACAGAGTTGGGAGAAGATGCATGACGGAAATGGCGGTGCGCAGGTTACGCTGGACCTGATGCAGGCGCCGAGGACGGCGTTTGGGGTGCTGTCTGTGAGTGGGAAATCGAAGGAAGAAGATGAAGAATGTGGCGAGTTATGGAATTCCTTTCACGATCACGACTCCAATGTTGTTTAAAACTATAAACTTTTGAATCCTTTTATTATAAACTAATAATAATAATAATTGATTAACTAATTATTTGG

mRNA sequence

ATAAAAATACAATATTTTAAAAAATAATCTCATAAATACATATATAGTAGGAGTGGTCACAATCACAATCTCTGCTGTGTTTAGGAGATCTTGATATGGACCCCACCTTCTACACGTGTATGGCCCATCCCCTTCCCTATCCATTCTTCACAGTCACAAATTTTTTTAATCCTTTTTAATAGTTAAATTAAAAATTTTCACTTATTTAAAATTTAATTCAAGTATTTTTAGCCCTCTGTTTCCCTCTGTCTCTGTCTCGGTTTTCTCCGACACCAACCTCTTCTTTACTTCTTTTGGTATAAATTCCCCCAACCCCTTATGCCTATTTCTTCGCCCACCATTTCTAACCTCTCTTCTTCCTTTCCTTCTTTTGCTGCAGTTCTTGCAGTTCTTGCAGTTCTTGAGATGGAGATTTGTGGCAATTTGATTGGACAGTCCAATGCTGGAAGAGACCAAGCTGCCAACCCCACTACCGTTTGGGAGCACCTCAATTCCTCTCGCTTCCACTTGGATTGGGTCACTGCCAACTCCACTCACGGCGACGCTCACCAACACCACCAGTGTCTCTTCGCTGGAGATCACCATCAGGGCGGCCATTTCCACCGGGACCCACATCTCATGTGCTTGAAGCTCGGCAAGAGGCACTACTTTGAGGACGCCACTGCGGCGTCCGTCGTGGGGAAGAGAGGGAAGCCGTTGTACAGTACAGTTCCGACTAGTGTTCCTCGGTGTCAAGTGGAAGGGTGTCATGTGGCGCTGGTGAATGCTAAGGACTACCACCGTAGGCATAGGGTCTGCGAGATGCACTCCAAGGCTCCCAAAGTTGTGGTTGTTGGCTTAGAACAGAGGTTCTGCCAGCAGTGTAGCAGGTTTCATGTGATTTCTGAGTTTGATGATTCAAAGAGGAGCTGTAGGAGGAGATTAGCAGGGCACAATGAGAGACGAAGAAAGAGTTCTCAGGAATCTGTAGCAGCAAGGAACTGGTCCGGAGAAAACAAGTCGAGGACAGGTAAGATTGCATACATACCATCGCCGACGGGACGTGCTCTCTCTCTTCTGTCATCGAAGAACGAATCGTGGGCGACCTCATCGGAGCTATCGCTGAGGTCGAGCGCAGCGCTCCGAGAACTGATAGCGGAGAATCGCGCGGCCATTCTGGCTCGGCAGCTGAATCTGGAGAGAGATTGGCACTCAAACCACACAGGGACGGCGGATGATTTCGGAAGCGGAGGCGTTGGATTGGAACAGAGTTGGGAGAAGATGCATGACGGAAATGGCGGTGCGCAGGTTACGCTGGACCTGATGCAGGCGCCGAGGACGGCGTTTGGGGTGCTGTCTGTGAGTGGGAAATCGAAGGAAGAAGATGAAGAATGTGGCGAGTTATGGAATTCCTTTCACGATCACGACTCCAATGTTGTTTAAAACTATAAACTTTTGAATCCTTTTATTATAAACTAATAATAATAATAATTGATTAACTAATTATTTGG

Coding sequence (CDS)

ATGCCTATTTCTTCGCCCACCATTTCTAACCTCTCTTCTTCCTTTCCTTCTTTTGCTGCAGTTCTTGCAGTTCTTGCAGTTCTTGAGATGGAGATTTGTGGCAATTTGATTGGACAGTCCAATGCTGGAAGAGACCAAGCTGCCAACCCCACTACCGTTTGGGAGCACCTCAATTCCTCTCGCTTCCACTTGGATTGGGTCACTGCCAACTCCACTCACGGCGACGCTCACCAACACCACCAGTGTCTCTTCGCTGGAGATCACCATCAGGGCGGCCATTTCCACCGGGACCCACATCTCATGTGCTTGAAGCTCGGCAAGAGGCACTACTTTGAGGACGCCACTGCGGCGTCCGTCGTGGGGAAGAGAGGGAAGCCGTTGTACAGTACAGTTCCGACTAGTGTTCCTCGGTGTCAAGTGGAAGGGTGTCATGTGGCGCTGGTGAATGCTAAGGACTACCACCGTAGGCATAGGGTCTGCGAGATGCACTCCAAGGCTCCCAAAGTTGTGGTTGTTGGCTTAGAACAGAGGTTCTGCCAGCAGTGTAGCAGGTTTCATGTGATTTCTGAGTTTGATGATTCAAAGAGGAGCTGTAGGAGGAGATTAGCAGGGCACAATGAGAGACGAAGAAAGAGTTCTCAGGAATCTGTAGCAGCAAGGAACTGGTCCGGAGAAAACAAGTCGAGGACAGGTAAGATTGCATACATACCATCGCCGACGGGACGTGCTCTCTCTCTTCTGTCATCGAAGAACGAATCGTGGGCGACCTCATCGGAGCTATCGCTGAGGTCGAGCGCAGCGCTCCGAGAACTGATAGCGGAGAATCGCGCGGCCATTCTGGCTCGGCAGCTGAATCTGGAGAGAGATTGGCACTCAAACCACACAGGGACGGCGGATGATTTCGGAAGCGGAGGCGTTGGATTGGAACAGAGTTGGGAGAAGATGCATGACGGAAATGGCGGTGCGCAGGTTACGCTGGACCTGATGCAGGCGCCGAGGACGGCGTTTGGGGTGCTGTCTGTGAGTGGGAAATCGAAGGAAGAAGATGAAGAATGTGGCGAGTTATGGAATTCCTTTCACGATCACGACTCCAATGTTGTTTAA

Protein sequence

MPISSPTISNLSSSFPSFAAVLAVLAVLEMEICGNLIGQSNAGRDQAANPTTVWEHLNSSRFHLDWVTANSTHGDAHQHHQCLFAGDHHQGGHFHRDPHLMCLKLGKRHYFEDATAASVVGKRGKPLYSTVPTSVPRCQVEGCHVALVNAKDYHRRHRVCEMHSKAPKVVVVGLEQRFCQQCSRFHVISEFDDSKRSCRRRLAGHNERRRKSSQESVAARNWSGENKSRTGKIAYIPSPTGRALSLLSSKNESWATSSELSLRSSAALRELIAENRAAILARQLNLERDWHSNHTGTADDFGSGGVGLEQSWEKMHDGNGGAQVTLDLMQAPRTAFGVLSVSGKSKEEDEECGELWNSFHDHDSNVV

Homology

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BLAST of Carg24168 vs. NCBI nr
Match: XP_022944840.1 (squamosa promoter-binding-like protein 7 [Cucurbita moschata])

HSP 1 Score: 692.6 bits (1786), Expect = 7.3e-196
Identity = 350/368 (95.11%), Postives = 350/368 (95.11%), Query Frame = 0


Query: 1   MPISSPTISNLSSSXXXXXXXXXXXXXXEMEICGNLIGQSNAGRDQAANPTTVWEHLNSS 60
           MPISSPTISNLSSS              EMEICGNLIGQSNAGRDQAANPTTVWEHLNSS
Sbjct: 1   MPISSPTISNLSSS---FPSFAAVLAVLEMEICGNLIGQSNAGRDQAANPTTVWEHLNSS 60

Query: 61  RFHLDWVTANSTHGDAHQHHQCLFAGDHHQGGHFHRDPHLMCLKLGKRHYFEDATAASVV 120
           RFHLDWVTANSTHGDAHQHHQCLFAGDHHQGGHFHRDPHLMCLKLGKRHYFEDATAASVV
Sbjct: 61  RFHLDWVTANSTHGDAHQHHQCLFAGDHHQGGHFHRDPHLMCLKLGKRHYFEDATAASVV 120

Query: 121 GKRGKPLYSTVPTSVPRCQVEGCHVALVNAKDYHRRHRVCEMHSKAPKVVVVGLEQRFCQ 180
           GKRGKPLYSTVPTSVPRCQVEGCHVALVNAKDYHRRHRVCEMHSKAPKVVVVGLEQRFCQ
Sbjct: 121 GKRGKPLYSTVPTSVPRCQVEGCHVALVNAKDYHRRHRVCEMHSKAPKVVVVGLEQRFCQ 180

Query: 181 QCSRFHVISEFDDSKRSCRRRLAGHNERRRKSSQESVAARNWSGENKSRTGKIAYIPSPT 240
           QCSRFHVISEFDDSKRSCRRRLAGHNERRRKSSQESVAARNW GENKSRTGKIAYIPSPT
Sbjct: 181 QCSRFHVISEFDDSKRSCRRRLAGHNERRRKSSQESVAARNWFGENKSRTGKIAYIPSPT 240

Query: 241 GRALSLLSSKNESWATSSELSLRSSAALRELIAENRAAILARQLNLERDWHSNHTGTADD 300
           GRALSLLSSKNESWATSSELSLRSSAALRELIAENRAAILARQLNLERDWHSNHT TADD
Sbjct: 241 GRALSLLSSKNESWATSSELSLRSSAALRELIAENRAAILARQLNLERDWHSNHTRTADD 300

Query: 301 FGSGGVGLEQSWEKMHDGNGGAQVTLDL-MQAPRTAFGVLSVSGKSKEEDEECGELWNSF 360
           FGSGGVGLEQSWEKMHDGNGGAQVTLDL MQAPRTAFGVLSVSGKSKEEDEECGELWNSF
Sbjct: 301 FGSGGVGLEQSWEKMHDGNGGAQVTLDLMMQAPRTAFGVLSVSGKSKEEDEECGELWNSF 360

Query: 361 HDHDSNVV 368
           H HDSNVV
Sbjct: 361 HYHDSNVV 365

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BLAST of Carg24168 vs. NCBI nr
Match: XP_023539009.1 (squamosa promoter-binding-like protein 7 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 683.3 bits (1762), Expect = 4.5e-193
Identity = 345/368 (93.75%), Postives = 345/368 (93.75%), Query Frame = 0


Query: 1   MPISSPTISNLSSSXXXXXXXXXXXXXXEMEICGNLIGQSNAGRDQAANPTTVWEHLNSS 60
           MPISSPTISNLSSS              EMEICGNLIGQSNAGRDQ ANPTTVWEHLNSS
Sbjct: 1   MPISSPTISNLSSS---FPSFAALLAVLEMEICGNLIGQSNAGRDQTANPTTVWEHLNSS 60

Query: 61  RFHLDWVTANSTHGDAHQHHQCLFAGDHHQGGHFHRDPHLMCLKLGKRHYFEDATAASVV 120
           RFHLDW TANSTHGDAHQHHQCLF GDHHQGGHFHRDPHLMCLKLGKRHYFEDATAASVV
Sbjct: 61  RFHLDWATANSTHGDAHQHHQCLFPGDHHQGGHFHRDPHLMCLKLGKRHYFEDATAASVV 120

Query: 121 GKRGKPLYSTVPTSVPRCQVEGCHVALVNAKDYHRRHRVCEMHSKAPKVVVVGLEQRFCQ 180
           GKRGKPLYSTVPTSVPRCQVEGCHVALVNAKDYHRRHRVCEMHSKAPKVVVVGLEQRFCQ
Sbjct: 121 GKRGKPLYSTVPTSVPRCQVEGCHVALVNAKDYHRRHRVCEMHSKAPKVVVVGLEQRFCQ 180

Query: 181 QCSRFHVISEFDDSKRSCRRRLAGHNERRRKSSQESVAARNWSGENKSRTGKIAYIPSPT 240
           QCSRFHVISEFDDSKRSCRRRLAGHNERRRKSSQESVAARNWSGENKSRTGKIAYIPSPT
Sbjct: 181 QCSRFHVISEFDDSKRSCRRRLAGHNERRRKSSQESVAARNWSGENKSRTGKIAYIPSPT 240

Query: 241 GRALSLLSSKNESWATSSELSLRSSAALRELIAENRAAILARQLNLERDWHSNHTGTADD 300
           GRALSLLSSKNESWATSSELSLRSSAALRELIAENRAAILARQL LERDWHSNHT TADD
Sbjct: 241 GRALSLLSSKNESWATSSELSLRSSAALRELIAENRAAILARQLILERDWHSNHTRTADD 300

Query: 301 FGSGGVGLEQSWEKMH-DGNGGAQVTLDLMQAPRTAFGVLSVSGKSKEEDEECGELWNSF 360
           FG GGVGLEQSWEKMH DGNGGA VTLDLMQAPRTAFGVLSVSGKSKEEDEECGELWNSF
Sbjct: 301 FGGGGVGLEQSWEKMHDDGNGGAHVTLDLMQAPRTAFGVLSVSGKSKEEDEECGELWNSF 360

Query: 361 HDHDSNVV 368
            DHDSNVV
Sbjct: 361 QDHDSNVV 365

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BLAST of Carg24168 vs. NCBI nr
Match: XP_022974238.1 (squamosa promoter-binding-like protein 7 [Cucurbita maxima])

HSP 1 Score: 674.1 bits (1738), Expect = 2.7e-190
Identity = 339/367 (92.37%), Postives = 343/367 (93.46%), Query Frame = 0


Query: 1   MPISSPTISNLSSSXXXXXXXXXXXXXXEMEICGNLIGQSNAGRDQAANPTTVWEHLNSS 60
           MPISSPTISNLSSS              EMEICGNLIGQSNAGRDQ ANPT VWEHLNSS
Sbjct: 1   MPISSPTISNLSSS---FPSFAAVLAVLEMEICGNLIGQSNAGRDQTANPTNVWEHLNSS 60

Query: 61  RFHLDWVTANSTHGDAHQHHQCLFAGDHHQGGHFHRDPHLMCLKLGKRHYFEDATAASVV 120
           RFHLDW TANSTHGDAHQHHQCL+AGDHHQGGHFHRDP+LMCLKLGKRHYFEDATA SVV
Sbjct: 61  RFHLDWATANSTHGDAHQHHQCLYAGDHHQGGHFHRDPYLMCLKLGKRHYFEDATAPSVV 120

Query: 121 GKRGKPLYSTVPTSVPRCQVEGCHVALVNAKDYHRRHRVCEMHSKAPKVVVVGLEQRFCQ 180
           GKRGKPLYSTVP SVPRCQVEGCHVALVNAKDYHRRHRVCEMHSKAPKVVVVGLEQRFCQ
Sbjct: 121 GKRGKPLYSTVPISVPRCQVEGCHVALVNAKDYHRRHRVCEMHSKAPKVVVVGLEQRFCQ 180

Query: 181 QCSRFHVISEFDDSKRSCRRRLAGHNERRRKSSQESVAARNWSGENKSRTGKIAYIPSPT 240
           QCSRFHVISEFDDSKRSCRRRLAGHNERRRKSSQESVAARNWSGENKSRTGKIAYIPSPT
Sbjct: 181 QCSRFHVISEFDDSKRSCRRRLAGHNERRRKSSQESVAARNWSGENKSRTGKIAYIPSPT 240

Query: 241 GRALSLLSSKNESWATSSELSLRSSAALRELIAENRAAILARQLNLERDWHSNHTGTADD 300
           GRALSLLSSKNESW TSSELSLRSSAALRELIAENRAAILARQLNLERDWHSNHT TADD
Sbjct: 241 GRALSLLSSKNESWETSSELSLRSSAALRELIAENRAAILARQLNLERDWHSNHTRTADD 300

Query: 301 FGSGGVGLEQSWEKMHDGNGGAQVTLDLMQAPRTAFGVLSVSGKSKEEDEECGELWNSFH 360
           FG GGVGLEQSWEKMHDG+GGA VTLDLMQAPRTAFG+LSVSGKSKEEDEEC ELWNSFH
Sbjct: 301 FG-GGVGLEQSWEKMHDGHGGAHVTLDLMQAPRTAFGLLSVSGKSKEEDEECRELWNSFH 360

Query: 361 DHDSNVV 368
           DHDSNVV
Sbjct: 361 DHDSNVV 363

[Close]

BLAST of Carg24168 vs. NCBI nr
Match: XP_022924306.1 (squamosa promoter-binding-like protein 7 [Cucurbita moschata])

HSP 1 Score: 505.0 bits (1299), Expect = 2.2e-139
Identity = 280/388 (72.16%), Postives = 294/388 (75.77%), Query Frame = 0


Query: 29  EMEICGNLIGQSNAGRDQAAN------PTTVWEHLNSSRFHLDWVTANSTHGD------- 88
           EMEIC NL+G SN  RDQ  N      P  +W+  NSSRF LDW TANS   D       
Sbjct: 2   EMEICANLMGHSNPTRDQTPNATNLSCPNNIWD-FNSSRFDLDWATANSLCPDTTRSQPM 61

Query: 89  -AH-----------QHHQCLFAGDHHQGGHFHRDPHLMCLKLGKRHYFEDATAASV---- 148
            AH           +HHQ L+A D HQ  HFH DPHLMCLKLGKRHYFEDATA SV    
Sbjct: 62  SAHALWLHPHDADARHHQFLYAAD-HQRAHFHPDPHLMCLKLGKRHYFEDATAPSVVGGF 121

Query: 149 --VGKRGKPL-------YSTVPTSVPRCQVEGCHVALVNAKDYHRRHRVCEMHSKAPKVV 208
             VGKRGK L       Y  VPT+VPRCQVEGCHVALVNAKDYHRRHRVCEMHSKAPKVV
Sbjct: 122 ATVGKRGKGLYGGDGGPYGPVPTTVPRCQVEGCHVALVNAKDYHRRHRVCEMHSKAPKVV 181

Query: 209 VVGLEQRFCQQCSRFHVISEFDDSKRSCRRRLAGHNERRRKSSQESVAARNWSGENKSRT 268
           VVGLEQRFCQQCSRFHVISEFDDSKRSCRRRLAGHNERRRKSS ESVAARN + ENKS T
Sbjct: 182 VVGLEQRFCQQCSRFHVISEFDDSKRSCRRRLAGHNERRRKSSHESVAARNCTQENKSMT 241

Query: 269 GKIAYIPSPTGRALSLLSSKNESWATSSELSLRSSAALRELIAENRAAILARQLNLERDW 328
           G IAYIPSPTGRALSLLSSK E+WATSSELSLRSSAALRELIAENRAAILARQL L+RDW
Sbjct: 242 GSIAYIPSPTGRALSLLSSKKETWATSSELSLRSSAALRELIAENRAAILARQLILDRDW 301

Query: 329 HSNHTGTADDFGSGGVGL-----------EQSWEKMHDGNGGAQVTLDLMQAPRTAFGVL 368
           H NH    DDFG GGVG            +QSWE M++ NGGA VTLDLMQAP TAFG+L
Sbjct: 302 HLNHAAATDDFGGGGVGFHQQQGLYCEQQQQSWEGMNE-NGGAHVTLDLMQAPSTAFGML 361

[Close]

BLAST of Carg24168 vs. NCBI nr
Match: XP_022980839.1 (squamosa promoter-binding-like protein 7 [Cucurbita maxima])

HSP 1 Score: 481.9 bits (1239), Expect = 2.0e-132
Identity = 273/389 (70.18%), Postives = 289/389 (74.29%), Query Frame = 0


Query: 29  EMEICGNLIGQSNAGRDQAAN------PTTVWEHLNSSRFHLDWVTANSTHGD------- 88
           EMEIC NL+G SN  RDQ  N      P  +W+  NSSRF LDW TANS   D       
Sbjct: 2   EMEICANLMGHSNPTRDQTPNATNLSCPNNIWD-FNSSRFDLDWATANSLCPDTTRSQPM 61

Query: 89  -AH-----------QHHQCLFAGDHHQGGHFHRDPHLMCLKLGKRHYFEDATAASV---- 148
            AH           +HHQ L+A D HQ  HFH DPHLMCLKLGKRHYFEDATA SV    
Sbjct: 62  SAHALWLHPHDADARHHQFLYAAD-HQRAHFHPDPHLMCLKLGKRHYFEDATAPSVVGGF 121

Query: 149 --VGKRGKPL-------YSTVPTSVPRCQVEGCHVALVNAKDYHRRHRVCEMHSKAPKVV 208
             VGKRGK L       Y  VPT+VPRCQVEGCHVALVNAKDYHRRHRVCEMHSKAPKVV
Sbjct: 122 ATVGKRGKGLYGGDGGPYGPVPTTVPRCQVEGCHVALVNAKDYHRRHRVCEMHSKAPKVV 181

Query: 209 VVGLEQRFCQQCSRFHVISEFDDSKRSCRRRLAGHNERRRKSSQESVAARNWSGENKSRT 268
           VVGLEQRFCQQCSRFHVISEFDDSKRSCRRRLAGHNERRRKSS ESVAARN + ENKS T
Sbjct: 182 VVGLEQRFCQQCSRFHVISEFDDSKRSCRRRLAGHNERRRKSSHESVAARNCTQENKSMT 241

Query: 269 GKIAYIPSPTGRALSLLSSKNESWATSSELSLRSSAALRELIAENRAAILARQLNLERDW 328
           G IAYIPSPTGRALSLLSSK E+WAT+SELSLRSSAALRELIAENRAAILARQL L+RDW
Sbjct: 242 GNIAYIPSPTGRALSLLSSKKETWATTSELSLRSSAALRELIAENRAAILARQLILDRDW 301

Query: 329 HSNHTGTA--------DDFGSGGVGLE----QSWEKMHDGNGGAQVTLDLMQAPRTAFGV 368
           H NH  T               G+  E    QSWE M++ NGGA VTLDLMQAP TAFG+
Sbjct: 302 HLNHAATTXXXXXXXXXXXXXXGLYCEXXXXQSWEGMNE-NGGAHVTLDLMQAPSTAFGM 361

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BLAST of Carg24168 vs. TAIR10
Match: AT5G43270.2 (squamosa promoter binding protein-like 2)

HSP 1 Score: 136.7 bits (343), Expect = 2.8e-32
Identity = 74/131 (56.49%), Postives = 90/131 (68.70%), Query Frame = 0


Query: 97  DPHLMCLKLGKRHYFED--------------ATAASVVG--KRGKPLYSTVPTSVPRCQV 156
           DP ++ LKLGKR YFED                A+S V   K+ K +   + T  P CQV
Sbjct: 115 DP-VLGLKLGKRTYFEDFWEVENAKGLGLPVTLASSSVSPVKKSKSIPQRLQT--PHCQV 174

Query: 157 EGCHVALVNAKDYHRRHRVCEMHSKAPKVVVVGLEQRFCQQCSRFHVISEFDDSKRSCRR 212
           EGC++ L +AKDYHR+HR+CE HSK PKVVV G+E+RFCQQCSRFH +SEFD+ KRSCRR
Sbjct: 175 EGCNLDLSSAKDYHRKHRICENHSKFPKVVVSGVERRFCQQCSRFHCLSEFDEKKRSCRR 234

[Close]

BLAST of Carg24168 vs. TAIR10
Match: AT1G27360.1 (squamosa promoter-like 11)

HSP 1 Score: 134.4 bits (337), Expect = 1.4e-31
Identity = 68/126 (53.97%), Postives = 84/126 (66.67%), Query Frame = 0


Query: 101 MCLKLGKRHYFED---------------ATAASVVGKRGKPLYSTVPTSVPRCQVEGCHV 160
           +CLKLGKR Y E+                   SVV  + K    ++P  VPRCQ++GC +
Sbjct: 125 LCLKLGKRTYSEEYWGRNNNEISAVSMKLLTPSVVAGKSKLCGQSMP--VPRCQIDGCEL 184

Query: 161 ALVNAKDYHRRHRVCEMHSKAPKVVVVGLEQRFCQQCSRFHVISEFDDSKRSCRRRLAGH 212
            L +AK YHR+H+VCE HSK PKV V GLE+RFCQQCSRFH +SEFD+ KRSCR+RL+ H
Sbjct: 185 DLSSAKGYHRKHKVCEKHSKCPKVSVSGLERRFCQQCSRFHAVSEFDEKKRSCRKRLSHH 244

[Close]

BLAST of Carg24168 vs. TAIR10
Match: AT1G27370.1 (squamosa promoter binding protein-like 10)

HSP 1 Score: 133.7 bits (335), Expect = 2.4e-31
Identity = 78/173 (45.09%), Postives = 100/173 (57.80%), Query Frame = 0


Query: 101 MCLKLGKRHYFE--------DATAASV------VGKRGKPLYSTVPTSVPRCQVEGCHVA 160
           +CLKLGKR Y E        D +A S+      V  R K         VPRCQ++GC + 
Sbjct: 125 LCLKLGKRTYSEEFWGRNNNDLSAVSMNLLTPSVVARKKTKSCGQSMQVPRCQIDGCELD 184

Query: 161 LVNAKDYHRRHRVCEMHSKAPKVVVVGLEQRFCQQCSRFHVISEFDDSKRSCRRRLAGHN 220
           L ++KDYHR+HRVCE HSK PKVVV GLE+RFCQQCSRFH +SEFD+ KRSCR+RL+ HN
Sbjct: 185 LSSSKDYHRKHRVCETHSKCPKVVVSGLERRFCQQCSRFHAVSEFDEKKRSCRKRLSHHN 244

Query: 221 ERRRKSSQESVAARNWSGENKSRTGKIAYIPSPTGRALSLLSSKNESWATSSE 260
            RRRK             + +  T  +       G +L+  S +  +W T+ E
Sbjct: 245 ARRRKPQGVFPLNSERVFDRRQHTSMLW-----NGLSLNTRSEEKYTWGTTYE 292

[Close]

BLAST of Carg24168 vs. TAIR10
Match: AT1G02065.1 (squamosa promoter binding protein-like 8)

HSP 1 Score: 131.7 bits (330), Expect = 9.1e-31
Identity = 69/123 (56.10%), Postives = 84/123 (68.29%), Query Frame = 0


Query: 103 LKLGKRHYFE--DATAASVVGKRGKPLYSTVPTSV--PRCQVEGCHVALVNAKDYHRRHR 162
           L LG R YF   D    S + +R +P  S +  S+  PRCQ EGC+  L +AK YHRRH+
Sbjct: 149 LNLGGRTYFSAADDDFVSRLYRRSRPGESGMANSLSTPRCQAEGCNADLSHAKHYHRRHK 208

Query: 163 VCEMHSKAPKVVVVGLEQRFCQQCSRFHVISEFDDSKRSCRRRLAGHNERRRKSSQESVA 222
           VCE HSKA  VV  GL QRFCQQCSRFH++SEFD+ KRSCR+RLA HN RRRK  Q + A
Sbjct: 209 VCEFHSKASTVVAAGLSQRFCQQCSRFHLLSEFDNGKRSCRKRLADHNRRRRKCHQSASA 268

[Close]

BLAST of Carg24168 vs. TAIR10
Match: AT2G42200.1 (squamosa promoter binding protein-like 9)

HSP 1 Score: 130.2 bits (326), Expect = 2.6e-30
Identity = 72/132 (54.55%), Postives = 84/132 (63.64%), Query Frame = 0


Query: 135 VPRCQVEGCHVALVNAKDYHRRHRVCEMHSKAPKVVVVGLEQRFCQQCSRFHVISEFDDS 194
           +PRCQVEGC + L NAK Y+ RHRVC +HSK PKV V G+EQRFCQQCSRFH + EFD  
Sbjct: 71  IPRCQVEGCGMDLTNAKGYYSRHRVCGVHSKTPKVTVAGIEQRFCQQCSRFHQLPEFDLE 130

Query: 195 KRSCRRRLAGHNERRRKSSQESVAARNWSGENKSRTGKIA---YIPSPTGRALSLLSSKN 254
           KRSCRRRLAGHNERRRK    S++         SR G+IA   Y     G   S L ++ 
Sbjct: 131 KRSCRRRLAGHNERRRKPQPASLSVL------ASRYGRIAPSLYENGDAGMNGSFLGNQE 190

Query: 255 ESWATSSELSLR 264
             W +S  L  R
Sbjct: 191 IGWPSSRTLDTR 196

[Close]

BLAST of Carg24168 vs. Swiss-Prot
Match: sp|Q7XT42|SPL7_ORYSJ (Squamosa promoter-binding-like protein 7 OS=Oryza sativa subsp. japonica OX=39947 GN=SPL7 PE=2 SV=2)

HSP 1 Score: 170.2 bits (430), Expect = 4.1e-41
Identity = 121/281 (43.06%), Postives = 148/281 (52.67%), Query Frame = 0


Query: 100 LMCLKLGKRHYFEDATAASVVGKRGKPLYSTVPTS-----------------VPRCQVEG 159
           L CLKLGKR  F     A  V                               VPRCQVEG
Sbjct: 53  LTCLKLGKRPCFWGGDGAGQVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVVPRCQVEG 112

Query: 160 CHVALVNAKDYHRRHRVCEMHSKAPKVVVVGLEQRFCQQCSRFHVISEFDDSKRSCRRRL 219
           C + L   K+YHRRH+VCE+H+KAP+VVV G EQRFCQQCSRFHV++EFDD+K+SCRRRL
Sbjct: 113 CDITLQGVKEYHRRHKVCEVHAKAPRVVVHGTEQRFCQQCSRFHVLAEFDDAKKSCRRRL 172

Query: 220 AGHNERRRKSSQESVAARNWS---GENKSRTGKIAY-IPSPTGRALSLLSSKNES--W-A 279
           AGHNERRR+S+     AR  +   G      G   Y +P+ +  ALSLLSS   +  W  
Sbjct: 173 AGHNERRRRSNASEAMARGSAHPHGMPVLGHGFPPYGLPTSSAGALSLLSSARATGPWLM 232

Query: 280 TSSELSLRSSAALRELIAENRAAILARQLNLERD-------------------WHSNHTG 338
            + ++S RSSAAL ELIAENRAA+L+ Q   +R                    WH++   
Sbjct: 233 PTPDISARSSAALDELIAENRAALLSWQFFSDRQPPPAGRPTGRSPGSETAGGWHAHLQA 292

[Close]

BLAST of Carg24168 vs. Swiss-Prot
Match: sp|Q01JD1|SPL7_ORYSI (Squamosa promoter-binding-like protein 7 OS=Oryza sativa subsp. indica OX=39946 GN=SPL7 PE=2 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 7.1e-41
Identity = 121/281 (43.06%), Postives = 148/281 (52.67%), Query Frame = 0


Query: 100 LMCLKLGKRHYFEDATAASVVGKRGKPLYSTVPTS-----------------VPRCQVEG 159
           L CLKLGKR  F     A  V                               VPRCQVEG
Sbjct: 53  LTCLKLGKRPCFWGGDGAGQVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVVPRCQVEG 112

Query: 160 CHVALVNAKDYHRRHRVCEMHSKAPKVVVVGLEQRFCQQCSRFHVISEFDDSKRSCRRRL 219
           C + L   K+YHRRH+VCE+H+KAP+VVV G EQRFCQQCSRFHV++EFDD+K+SCRRRL
Sbjct: 113 CDITLQGVKEYHRRHKVCEVHAKAPRVVVHGTEQRFCQQCSRFHVLAEFDDAKKSCRRRL 172

Query: 220 AGHNERRRKSSQESVAARNWS---GENKSRTGKIAY-IPSPTGRALSLLSSKNES--W-A 279
           AGHNERRR+S+     AR  +   G      G   Y +P+ +  ALSLLSS   +  W  
Sbjct: 173 AGHNERRRRSNASEAMARGSAHPHGMPVLGHGFPPYGLPTSSAGALSLLSSARATGPWLM 232

Query: 280 TSSELSLRSSAALRELIAENRAAILARQLNLERD-------------------WHSNHTG 338
            + ++S RSSAAL ELIAENRAA+L+ Q   +R                    WH++   
Sbjct: 233 PTPDISARSSAALDELIAENRAALLSWQFFSDRQPPPAGRPTGRSPGSETAGGWHAHLQA 292

[Close]

BLAST of Carg24168 vs. Swiss-Prot
Match: sp|Q9S840|SPL2_ARATH (Squamosa promoter-binding-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=SPL2 PE=2 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 5.1e-31
Identity = 74/131 (56.49%), Postives = 90/131 (68.70%), Query Frame = 0


Query: 97  DPHLMCLKLGKRHYFED--------------ATAASVVG--KRGKPLYSTVPTSVPRCQV 156
           DP ++ LKLGKR YFED                A+S V   K+ K +   + T  P CQV
Sbjct: 115 DP-VLGLKLGKRTYFEDFWEVENAKGLGLPVTLASSSVSPVKKSKSIPQRLQT--PHCQV 174

Query: 157 EGCHVALVNAKDYHRRHRVCEMHSKAPKVVVVGLEQRFCQQCSRFHVISEFDDSKRSCRR 212
           EGC++ L +AKDYHR+HR+CE HSK PKVVV G+E+RFCQQCSRFH +SEFD+ KRSCRR
Sbjct: 175 EGCNLDLSSAKDYHRKHRICENHSKFPKVVVSGVERRFCQQCSRFHCLSEFDEKKRSCRR 234

[Close]

BLAST of Carg24168 vs. Swiss-Prot
Match: sp|A2YGR5|SPL12_ORYSI (Squamosa promoter-binding-like protein 12 OS=Oryza sativa subsp. indica OX=39946 GN=SPL12 PE=2 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 6.6e-31
Identity = 70/137 (51.09%), Postives = 91/137 (66.42%), Query Frame = 0


Query: 95  HRDPHLMCLKLGKRHYFEDATAASVVGKRGKPLYSTVPTSVPR-------------CQVE 154
           H +P ++ LKLGKR YFE+      V         T P++V +             CQVE
Sbjct: 125 HGEP-VIGLKLGKRTYFENVCGGQNVKSSSAASGVTCPSTVVKKMKVSQQSTQSSYCQVE 184

Query: 155 GCHVALVNAKDYHRRHRVCEMHSKAPKVVVVGLEQRFCQQCSRFHVISEFDDSKRSCRRR 214
           GC V L +A++YHR+H+VCE HSKAPKV+V GLE+RFCQQCSRFH ++EFD  K+SCRRR
Sbjct: 185 GCKVDLSSAREYHRKHKVCEAHSKAPKVIVSGLERRFCQQCSRFHGLAEFDQKKKSCRRR 244

Query: 215 LAGHNERRRKSSQESVA 219
           L+ HN RRRK  QE+++
Sbjct: 245 LSDHNARRRKPQQEAIS 260

[Close]

BLAST of Carg24168 vs. Swiss-Prot
Match: sp|Q5Z818|SPL12_ORYSJ (Squamosa promoter-binding-like protein 12 OS=Oryza sativa subsp. japonica OX=39947 GN=SPL12 PE=2 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 6.6e-31
Identity = 70/137 (51.09%), Postives = 91/137 (66.42%), Query Frame = 0


Query: 95  HRDPHLMCLKLGKRHYFEDATAASVVGKRGKPLYSTVPTSVPR-------------CQVE 154
           H +P ++ LKLGKR YFE+      V         T P++V +             CQVE
Sbjct: 125 HGEP-VIGLKLGKRTYFENVCGGQNVKSSSAASGVTCPSTVVKKMKVSQQSTQSSYCQVE 184

Query: 155 GCHVALVNAKDYHRRHRVCEMHSKAPKVVVVGLEQRFCQQCSRFHVISEFDDSKRSCRRR 214
           GC V L +A++YHR+H+VCE HSKAPKV+V GLE+RFCQQCSRFH ++EFD  K+SCRRR
Sbjct: 185 GCKVDLSSAREYHRKHKVCEAHSKAPKVIVSGLERRFCQQCSRFHGLAEFDQKKKSCRRR 244

Query: 215 LAGHNERRRKSSQESVA 219
           L+ HN RRRK  QE+++
Sbjct: 245 LSDHNARRRKPQQEAIS 260

[Close]

BLAST of Carg24168 vs. TrEMBL
Match: tr|A0A1S3AUU7|A0A1S3AUU7_CUCME (squamosa promoter-binding-like protein 7 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103483125 PE=4 SV=1)

HSP 1 Score: 438.0 bits (1125), Expect = 2.2e-119
Identity = 243/350 (69.43%), Postives = 271/350 (77.43%), Query Frame = 0


Query: 29  EMEICGNLIGQSNAGRDQAANPTTVWEHLNSSRFHLDWVTANSTHGDAHQHHQCLFAGDH 88
           EMEICGNL+G SN       N  T     N++  +           ++ Q H    +G+H
Sbjct: 2   EMEICGNLMGHSN------PNAATNLSWPNNTITNXXXXXNIIWELNSQQPHFLYASGEH 61

Query: 89  HQGGHFHRDPHLMCLKLGKRHYFEDATAAS-VVGKRGK-PLYSTVPTSVPRCQVEGCHVA 148
           +   HFH DPHLMCL LGKRHYFED+ A S ++GKR K P Y+   T+VPRCQVEGCHVA
Sbjct: 62  NPTTHFHPDPHLMCLNLGKRHYFEDSNAPSLILGKRAKSPFYA---TTVPRCQVEGCHVA 121

Query: 149 LVNAKDYHRRHRVCEMHSKAPKVVVVGLEQRFCQQCSRFHVISEFDDSKRSCRRRLAGHN 208
           LVNAKDYHRRHRVCEMHSKAPKVVV+GL+QRFCQQCSRFHVISEFDDSKRSCRRRLAGHN
Sbjct: 122 LVNAKDYHRRHRVCEMHSKAPKVVVLGLDQRFCQQCSRFHVISEFDDSKRSCRRRLAGHN 181

Query: 209 ERRRKSSQESVAARNWSGENKSRTGKIAYIPSPTGRALSLLSSKNESWATSSELSLRSSA 268
           ERRRKSS ES  ARN + ENKS T  IAY+PSPTGRALSLLSSKNESWA SSELS RSSA
Sbjct: 182 ERRRKSSHES--ARNCTQENKSMTNGIAYVPSPTGRALSLLSSKNESWANSSELSQRSSA 241

Query: 269 ALRELIAENRAAILARQLNLERDWHSNHTGTADDFGSGGVGLEQ---------SWEKMHD 328
           ALRELIAENRAAILARQL L+RDWHSNH G  DDFG GGVG +Q         SWE+M++
Sbjct: 242 ALRELIAENRAAILARQLILDRDWHSNH-GATDDFGGGGVGFQQQGLYCEQQHSWERMNE 301

Query: 329 GNGGAQVTLDLMQAPRTAFGVLSVSGKSKEEDEECGELWNSFHDHDSNVV 368
            NGG+ VTLDLMQAP +AFG+LSV GKSKEEDEEC ELWNSF+DHD +VV
Sbjct: 302 -NGGSHVTLDLMQAPSSAFGLLSVRGKSKEEDEECCELWNSFNDHDPHVV 338

[Close]

BLAST of Carg24168 vs. TrEMBL
Match: tr|A0A1S3AUZ3|A0A1S3AUZ3_CUCME (squamosa promoter-binding-like protein 7 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103483125 PE=4 SV=1)

HSP 1 Score: 434.1 bits (1115), Expect = 3.1e-118
Identity = 243/351 (69.23%), Postives = 271/351 (77.21%), Query Frame = 0


Query: 29  EMEICGNLIGQSNAGRDQAANPTTVWEHLNSSRFHLDWVTANSTHGDAHQHHQCLFAGDH 88
           EMEICGNL+G SN       N  T     N++  +           ++ Q H    +G+H
Sbjct: 2   EMEICGNLMGHSN------PNAATNLSWPNNTITNXXXXXNIIWELNSQQPHFLYASGEH 61

Query: 89  HQGGHFHRDPHLMCLKLGKRHYFEDATAAS-VVGKRGK-PLYSTVPTSVPRCQVEGCHVA 148
           +   HFH DPHLMCL LGKRHYFED+ A S ++GKR K P Y+   T+VPRCQVEGCHVA
Sbjct: 62  NPTTHFHPDPHLMCLNLGKRHYFEDSNAPSLILGKRAKSPFYA---TTVPRCQVEGCHVA 121

Query: 149 LVNAKDYHRRHRVCEMHSKAPKVVVVGLEQRFCQQCSRFHVISEFDDSKRSCRRRLAGHN 208
           LVNAKDYHRRHRVCEMHSKAPKVVV+GL+QRFCQQCSRFHVISEFDDSKRSCRRRLAGHN
Sbjct: 122 LVNAKDYHRRHRVCEMHSKAPKVVVLGLDQRFCQQCSRFHVISEFDDSKRSCRRRLAGHN 181

Query: 209 ERRRKSSQESVAARNWS-GENKSRTGKIAYIPSPTGRALSLLSSKNESWATSSELSLRSS 268
           ERRRKSS ES  ARN +  ENKS T  IAY+PSPTGRALSLLSSKNESWA SSELS RSS
Sbjct: 182 ERRRKSSHES--ARNCTQAENKSMTNGIAYVPSPTGRALSLLSSKNESWANSSELSQRSS 241

Query: 269 AALRELIAENRAAILARQLNLERDWHSNHTGTADDFGSGGVGLEQ---------SWEKMH 328
           AALRELIAENRAAILARQL L+RDWHSNH G  DDFG GGVG +Q         SWE+M+
Sbjct: 242 AALRELIAENRAAILARQLILDRDWHSNH-GATDDFGGGGVGFQQQGLYCEQQHSWERMN 301

Query: 329 DGNGGAQVTLDLMQAPRTAFGVLSVSGKSKEEDEECGELWNSFHDHDSNVV 368
           + NGG+ VTLDLMQAP +AFG+LSV GKSKEEDEEC ELWNSF+DHD +VV
Sbjct: 302 E-NGGSHVTLDLMQAPSSAFGLLSVRGKSKEEDEECCELWNSFNDHDPHVV 339

[Close]

BLAST of Carg24168 vs. TrEMBL
Match: tr|A0A0A0L8C0|A0A0A0L8C0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G117960 PE=4 SV=1)

HSP 1 Score: 430.3 bits (1105), Expect = 4.5e-117
Identity = 239/350 (68.29%), Postives = 265/350 (75.71%), Query Frame = 0


Query: 29  EMEICGNLIGQSNAGRDQAANPTTVWEHLNSSRFHLDWVTANSTHGDAHQHHQCLFAGDH 88
           EMEICGNL+G SN       N  T     N+               ++   H    +G+H
Sbjct: 2   EMEICGNLMGHSN------PNAATNISWPNNXXXXXXXXXXXXWELNSQHPHFLYASGEH 61

Query: 89  HQGGHFHRDPHLMCLKLGKRHYFEDATAAS-VVGKRGKPLYSTVPTSVPRCQVEGCHVAL 148
           +   HFH DPHLMCL LGKRHYFED+ A S ++GKR KP +    T+VPRCQVEGCHVAL
Sbjct: 62  NPTTHFHPDPHLMCLNLGKRHYFEDSNAPSLILGKRAKPPF--YATTVPRCQVEGCHVAL 121

Query: 149 VNAKDYHRRHRVCEMHSKAPKVVVVGLEQRFCQQCSRFHVISEFDDSKRSCRRRLAGHNE 208
           VNAKDYHRRHRVCEMHSKAPKVVV+GL+QRFCQQCSRFHVISEFDDSKRSCRRRLAGHNE
Sbjct: 122 VNAKDYHRRHRVCEMHSKAPKVVVLGLDQRFCQQCSRFHVISEFDDSKRSCRRRLAGHNE 181

Query: 209 RRRKSSQESVAARNWS-GENKSRTGKIAYIPSPTGRALSLLSSKNESWATSSELSLRSSA 268
           RRRKSS ES  ARN +  ENKS T  IAY+PSPTGRALSLLSSKNESWA SSELS RSSA
Sbjct: 182 RRRKSSHES--ARNCTQAENKSMTNGIAYVPSPTGRALSLLSSKNESWANSSELSQRSSA 241

Query: 269 ALRELIAENRAAILARQLNLERDWHSNHTGTADDFGSGGVGLEQ---------SWEKMHD 328
           ALRELIAENRAAILARQL L+RDWH NH GT D  G GGVG +Q         SWE+M++
Sbjct: 242 ALRELIAENRAAILARQLILDRDWHPNHGGTDDFGGGGGVGFQQQGLYCEQQHSWERMNE 301

Query: 329 GNGGAQVTLDLMQAPRTAFGVLSVSGKSKEEDEECGELWNSFHDHDSNVV 368
            NGG+ VTLDLMQAP +AFG+LSV GKSKEEDEEC ELWNSF+DHD +VV
Sbjct: 302 -NGGSHVTLDLMQAPSSAFGLLSVRGKSKEEDEECCELWNSFNDHDPHVV 340

[Close]

BLAST of Carg24168 vs. TrEMBL
Match: tr|F6GV74|F6GV74_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_15s0021g02290 PE=4 SV=1)

HSP 1 Score: 373.6 bits (958), Expect = 5.0e-100
Identity = 199/294 (67.69%), Postives = 220/294 (74.83%), Query Frame = 0


Query: 91  GGHFHRDPHLMCLKLGKRHYFEDATAASVVGKRGKPLYS--------------TVPTSVP 150
           G H H DPHLMCLKLGKRHYFED+T      KRG+P YS                P +VP
Sbjct: 101 GSHLHPDPHLMCLKLGKRHYFEDSTPGISTDKRGRPYYSGGSSQSSATAVSVVGSPATVP 160

Query: 151 RCQVEGCHVALVNAKDYHRRHRVCEMHSKAPKVVVVGLEQRFCQQCSRFHVISEFDDSKR 210
           RCQVEGCHVALVNAKDYHRRH+VCEMHSKAPKVVV+GLEQRFCQQCSRFH +SEFDDSKR
Sbjct: 161 RCQVEGCHVALVNAKDYHRRHKVCEMHSKAPKVVVLGLEQRFCQQCSRFHAVSEFDDSKR 220

Query: 211 SCRRRLAGHNERRRKSSQESVAARNWSGENKSRTGKIAYIPSPTGRALSLLSSKNESWAT 270
           SCRRRLAGHNERRRKSS +SVA       NK  TG+ AY+ SPTGRALSLLSSK++SW +
Sbjct: 221 SCRRRLAGHNERRRKSSHDSVARNPSQAANKLMTGRFAYLSSPTGRALSLLSSKSDSWVS 280

Query: 271 SSELSLRSSAALRELIAENRAAILARQLNLERDWHSNHTGTADDFGS--GGVGL------ 330
           S+ELSLRSSAALRELIAENRAAILARQL L+RDWH +H G  D  G   G   L      
Sbjct: 281 SAELSLRSSAALRELIAENRAAILARQLILDRDWHWHHHGMEDSGGEQPGSDSLMPHQHQ 340

Query: 331 ----EQSWEKMHDGNGGAQVTLDLMQAPRTAFGVLSVSGKSKEEDEECGELWNS 359
                +SWE+ H+ NG   VTLDLMQAP +AFG+LSV  KSKEE+EEC ELWNS
Sbjct: 341 MFPGSRSWERFHEANG--HVTLDLMQAPSSAFGLLSVREKSKEEEEECSELWNS 392

[Close]

BLAST of Carg24168 vs. TrEMBL
Match: tr|A0A2I4HDD5|A0A2I4HDD5_9ROSI (squamosa promoter-binding-like protein 7 OS=Juglans regia OX=51240 GN=LOC109016096 PE=4 SV=1)

HSP 1 Score: 339.0 bits (868), Expect = 1.4e-89
Identity = 207/408 (50.74%), Postives = 251/408 (61.52%), Query Frame = 0


Query: 30  MEICGNLIGQSNAGRDQAANPTT----VWEHLNSSRFHLDWVTANST------------- 89
           MEI GN+IGQSN  R Q AN       +WE LN+SR  +DW   NST             
Sbjct: 1   MEIGGNMIGQSNVERGQNANNANIGWDIWE-LNTSR--MDWSGGNSTLYTAANDASAITG 60

Query: 90  -------HGDAHQHH---------------------QCLFAGDHHQGGHFHRDPHLMCLK 149
                  + DA   H                       L++GD   G H H DPHLMCLK
Sbjct: 61  GSSSTTRNQDASAAHALDFPHLXXXXXXXXXXXXXXXXLYSGD---GSHCHPDPHLMCLK 120

Query: 150 LGKRHYFEDAT--------AASVVGKRGKPLYS----------TVPTSVPRCQVEGCHVA 209
           LGKRHYFED +          S +GKRGKP YS           +P +VPRCQVEGCHVA
Sbjct: 121 LGKRHYFEDTSLLGDRHVAGLSSIGKRGKPFYSXXXXXXXXXXXLPATVPRCQVEGCHVA 180

Query: 210 LVNAKDYHRRHRVCEMHSKAPKVVVVGLEQRFCQQCSRFHVISEFDDSKRSCRRRLAGHN 269
           L+NAK+YHRRH+VC+MHSKAPKVVV+G EQRFCQQCSRFH +SEFD+SKRSCRRRLAGHN
Sbjct: 181 LLNAKEYHRRHKVCDMHSKAPKVVVLGSEQRFCQQCSRFHPVSEFDESKRSCRRRLAGHN 240

Query: 270 ERRRKSSQESVAARNWSGENKSRTGKIAYIPSPTGRALSLLSSKNESWATSSELSLRSSA 329
           ERRRKS+ +S      +  N ++ G ++Y+ SPTGRALSLLSSK++SW + ++LS RSSA
Sbjct: 241 ERRRKSAHDS------ANRNSTQGGGLSYLSSPTGRALSLLSSKSDSWVSPADLSSRSSA 300

Query: 330 ALRELIAENRAAILARQLNLERDW-HSNH----TGTADDFGSGGVGLEQ---------SW 361
           AL ELIAE+R+ ILARQL+L+RDW + NH     G      S  +   Q         SW
Sbjct: 301 ALCELIAEHRSGILARQLSLDRDWCNQNHGMEDLGEIQPRSSNSLLSHQQHIMFPEPHSW 360

The following BLAST results are available for this feature:

BLAST of Carg24168 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022944840.1	7.3e-196	95.11	squamosa promoter-binding-like protein 7 [Cucurbita moschata]	[more]
XP_023539009.1	4.5e-193	93.75	squamosa promoter-binding-like protein 7 [Cucurbita pepo subsp. pepo]	[more]
XP_022974238.1	2.7e-190	92.37	squamosa promoter-binding-like protein 7 [Cucurbita maxima]	[more]
XP_022924306.1	2.2e-139	72.16	squamosa promoter-binding-like protein 7 [Cucurbita moschata]	[more]
XP_022980839.1	2.0e-132	70.18	squamosa promoter-binding-like protein 7 [Cucurbita maxima]	[more]

BLAST of Carg24168 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G43270.2	2.8e-32	56.49	squamosa promoter binding protein-like 2	[more]
AT1G27360.1	1.4e-31	53.97	squamosa promoter-like 11	[more]
AT1G27370.1	2.4e-31	45.09	squamosa promoter binding protein-like 10	[more]
AT1G02065.1	9.1e-31	56.10	squamosa promoter binding protein-like 8	[more]
AT2G42200.1	2.6e-30	54.55	squamosa promoter binding protein-like 9	[more]

BLAST of Carg24168 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q7XT42\|SPL7_ORYSJ	4.1e-41	43.06	Squamosa promoter-binding-like protein 7 OS=Oryza sativa subsp. japonica OX=3994...	[more]
sp\|Q01JD1\|SPL7_ORYSI	7.1e-41	43.06	Squamosa promoter-binding-like protein 7 OS=Oryza sativa subsp. indica OX=39946 ...	[more]
sp\|Q9S840\|SPL2_ARATH	5.1e-31	56.49	Squamosa promoter-binding-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=SPL2...	[more]
sp\|A2YGR5\|SPL12_ORYSI	6.6e-31	51.09	Squamosa promoter-binding-like protein 12 OS=Oryza sativa subsp. indica OX=39946...	[more]
sp\|Q5Z818\|SPL12_ORYSJ	6.6e-31	51.09	Squamosa promoter-binding-like protein 12 OS=Oryza sativa subsp. japonica OX=399...	[more]

BLAST of Carg24168 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3AUU7\|A0A1S3AUU7_CUCME	2.2e-119	69.43	squamosa promoter-binding-like protein 7 isoform X2 OS=Cucumis melo OX=3656 GN=L...	[more]
tr\|A0A1S3AUZ3\|A0A1S3AUZ3_CUCME	3.1e-118	69.23	squamosa promoter-binding-like protein 7 isoform X1 OS=Cucumis melo OX=3656 GN=L...	[more]
tr\|A0A0A0L8C0\|A0A0A0L8C0_CUCSA	4.5e-117	68.29	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G117960 PE=4 SV=1	[more]
tr\|F6GV74\|F6GV74_VITVI	5.0e-100	67.69	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_15s0021g02290 PE=4 SV=...	[more]
tr\|A0A2I4HDD5\|A0A2I4HDD5_9ROSI	1.4e-89	50.74	squamosa promoter-binding-like protein 7 OS=Juglans regia OX=51240 GN=LOC1090160...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus

Vocabulary: **INTERPRO**
Term	Definition
IPR004333	SBP_dom
IPR036893	SBP_sf

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg24168-RA	Carg24168-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036893	SBP domain superfamily	GENE3D	G3DSA:4.10.1100.10		coord: 129..199 e-value: 2.1E-34 score: 119.3
IPR036893	SBP domain superfamily	SUPERFAMILY	SSF103612	SBT domain	coord: 136..216
IPR004333	SBP domain	PFAM	PF03110	SBP	coord: 138..211 e-value: 6.3E-32 score: 109.5
IPR004333	SBP domain	PROSITE	PS51141	ZF_SBP	coord: 135..212 score: 32.667
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 202..225
None	No IPR available	PANTHER	PTHR31251	FAMILY NOT NAMED	coord: 60..302
None	No IPR available	PANTHER	PTHR31251:SF15	SUBFAMILY NOT NAMED	coord: 60..302

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg24168	Cla021095	Watermelon (97103) v1	carwmB0094
Carg24168	Csa3G117960	Cucumber (Chinese Long) v2	carcuB0105
Carg24168	MELO3C005966	Melon (DHL92) v3.5.1	carmeB0099
Carg24168	ClCG05G000290	Watermelon (Charleston Gray)	carwcgB0096
Carg24168	CSPI03G07320	Wild cucumber (PI 183967)	carcpiB0110
Carg24168	Cucsa.259800	Cucumber (Gy14) v1	carcgyB0117
Carg24168	CmaCh06G009660	Cucurbita maxima (Rimu)	carcmaB0128
Carg24168	CmaCh14G021520	Cucurbita maxima (Rimu)	carcmaB0127
Carg24168	CmoCh06G009880	Cucurbita moschata (Rifu)	carcmoB0137
Carg24168	CmoCh14G022230	Cucurbita moschata (Rifu)	carcmoB0136
Carg24168	Lsi05G021990	Bottle gourd (USVL1VR-Ls)	carlsiB088
Carg24168	Cp4.1LG03g15640	Cucurbita pepo (Zucchini)	carcpeB0144
Carg24168	Cp4.1LG08g00360	Cucurbita pepo (Zucchini)	carcpeB0145
Carg24168	CsGy3G007470	Cucumber (Gy14) v2	carcgybB0105
Carg24168	MELO3C005966.2	Melon (DHL92) v3.6.1	carmedB0101
Carg24168	CsaV3_3G007450	Cucumber (Chinese Long) v3	carcucB0114
Carg24168	Bhi01G000430	Wax gourd	carwgoB0111

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg24168	Carg17677	Silver-seed gourd	carcarB109

The following block(s) are covering this gene:


Gene	Organism	Block
Carg24168	Watermelon (97103) v2	carwmbB0098