Lsi05G021850 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi05G021850
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Phosphoglycerate mutase family protein
Location	chr05 : 28487790 .. 28490545 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTCCACTTCCCCGGACTTGTACCAAAACGTCATTGTTCTGCGTCACGCCGATCGTCTAGACTTCTCCGACCATTCATGGGCGGCCACGGCGGCCCGTCCATGGGACCCGCCCCTCATGGAAGAGGGCCTTGTCCGGGCCTTCAACATGGGTCGGGTCATTATGAACAATATTGGATCCCCCATCCACCGGGTTTTCGTCTCTCCCTTCCTTCGTTGCCTTCAGACGGCCGCCCAAGTTGTCGCCGCCGTCGACCATGTTTCTGCTGAAACCGCCACCCGTGATTCCGCCGCTCCCTCCCAACTCAAGGTTAGAACTCCGCTCCAGCAGGATTTTTTTTCTCTCCCTCCATTACTGGGTACTAGTTTGAGGAGACAAGTGCGTGGTTAAAAATCTTTATATATATATATTTATTTATTTATTTATTTACTTGGTTAATGTATAATGAATTTAAAATGGATTAAAAGCAGTTGAAAATCGTTGAAACATAATGTCCGATGCAAAATTATAAATGGTTGGACTAATATAATTTTTATGTTATTGAACAAAATGAAATAAAACGGTAAACACATTTTTTAAAAGATAAAATGTGAGAGGTTGCCATAAAAAAAACAAAAAAATATAGTTATCATGTGAAAGAATTTGTATTTGAACAAAAAAGAAAGGCACAAAAGGTGCTTACAAAACACAAACACAATGAGTGTGAGTTTCAAGGTAAAATAGGCATTATAAAAAAATATAAGGACAAAGAGGAAAGTTAATATCTACCCTCATGGCCCTTTTTATTATAGTATAGATATAGATTTTTTTGGAGATAGTGGTAAATGAGAAGTTGAAATGTTAGGGGCGTTTGGGGCTAAATTAAGTTATTAAATATGGGTCGAGTTGTTTAATTTAGAGAGTTAATTAGTATGTGAAATTAAATAATTTGTGTTTTGGTATGTAGAGTTATTTAAAAGTTTGTGTTTGTGGTGCACACTTTAATATCAAATATTTATGTACCTTTCTAAATTTTAATTTCACTCAAATATGAATCAACCAACTACGCGACTATTGGAGGCGCGGAGTTGGTTATTATAGTATGTGGGTTATAATAGCCTATGTTTGAGGTGTAAACTCTTTTGTATGTGTTTGAGATGCATATTATTTTAGTACGGATTACAAATGAGGAGTGGAGATGGTTACAAAATATTAAACACCATAGATCATGAGAGTTTTCAAATAGTTTTACTGTACCTAAGTCCACTCCATCCAAAGTAAGTTAGAGGCTCAAATGCCCCCTTAAAGTTATTATTTTTAAAAGTTTCGAAACTAAAATAGATATTTTAAAAGTTTAACTACAAAGTGAAACAAACATAAAAGAAAACGAAATGAATTTGGTCATTTGTATGTGTGTACTTGACATGTTATCAAAAGTAAATATGGAGGATTATATATAGTAATAATAAAAAGAAAACGAGAGTATTTGACTATTTGGTTAAATTTTAAGCAGTACTTTTAAATAATTAAAAACCCATGATCAATGTTTAATTAGAATTGAAATATTGCACCTACGAAATGAAGTTAGAATGTAATTAGATTTTGGTCCACAGGTGTCTATAGAATATGGGTTATGTGAGAAGCTAAACCACAAAGCAATCCCAGCTGAAGTGGCTCCAATGGATTGGAACTGGAGTTTCAACATCACAGACCTTGATACAATATTGCCTACCGGTTCTACAGACCGTTCTGTGAAACCTATATATGAAGAGGTACAAAAAAAACTAGGTAGACCTTGTTCGGTAACGTTTCTATTTTCTGTTTCTTGTTCTACGTTTAAATCTTCTCGTTTCTTGTTTCAATATCTCATTTCAGATGCCACAATTTGGAGAGGTCCCTACGACTATACGGTCGAGATTTCAACAGGTTTTCAAGACTCTGGCTGATCAATACCATTCCCAGAATATCATGCTTGTCACTCATGGTGAGCCATAGAATAATGTAGTAAGCAAATTGTGTTGTTAGTTTCTTTTCCTCTGTTGTTTAATATATGGGTGCTTGTTTTTAGGCATAGGAGTTGGAGTTGTTGTTTCTACAGTTTTGAAGGACACAAGGGTTGTTCATGTTGATTATTGTGGATATGCTATCTTGAGGAGACCCATTTTTCTCAGCGGTGATTCATTTGTTGCTGGAAACTTTGAGTTGCGTTCGCTAGATGACACTGCTGGTATCAAATTTTCCAAATTAGTTCAAACTTAGCTGAGTCACTGAAGTGGGTTCTAATAGTTTGTATTTGGGATATAGACTATTTTAGTCTGTATTACAAGTAAGTAGAGAGGATGGTTACAAATAGTAAACACGGTAGATAACAAGGGTTTTCAAATAGTTTTACTGTAACTACGTGCGAGTTATAATAATAGAGAACTTCAACTATTATAATGGGAGATCCAAACATTAAGTGAGCCATAATAGTGCACTCTACTCAAGGTAAGTTGGGGGTCCAAACGCCCTTTCAACGGTTGCAACTAGTGAAATACAACTTGGTCTTGCGTTCTCGATTCTTTACTAGCTCGAGTCATGAAAGAACTTTGTTTCTGTACTTGCAGGAAAGACCATAGCAAGAAGTTTGTTTGTCAGTGTGTGATGATAAAGTTTATATCAGAATTCAGGGCTTTAATGTATTGAGGATCTTTTGGGAAGTTTTATCAGATCAAGTGATCTTCTTGTCTTTAGCTATACAAGAGCCTGTTATGACTGCCAAAGCCAATTGTTAA

mRNA sequence

ATGGATTCCACTTCCCCGGACTTGTACCAAAACGTCATTGTTCTGCGTCACGCCGATCGTCTAGACTTCTCCGACCATTCATGGGCGGCCACGGCGGCCCGTCCATGGGACCCGCCCCTCATGGAAGAGGGCCTTGTCCGGGCCTTCAACATGGGTCGGGTCATTATGAACAATATTGGATCCCCCATCCACCGGGTTTTCGTCTCTCCCTTCCTTCGTTGCCTTCAGACGGCCGCCCAAGTTGTCGCCGCCGTCGACCATGTTTCTGCTGAAACCGCCACCCGTGATTCCGCCGCTCCCTCCCAACTCAAGGTTTTCAAGACTCTGGCTGATCAATACCATTCCCAGAATATCATGCTTGTCACTCATGGCATAGGAGTTGGAGTTGTTGTTTCTACAGTTTTGAAGGACACAAGGGTTGTTCATGTTGATTATTGTGGATATGCTATCTTGAGGAGACCCATTTTTCTCAGCGATCAAGTGATCTTCTTGTCTTTAGCTATACAAGAGCCTGTTATGACTGCCAAAGCCAATTGTTAA

Coding sequence (CDS)

ATGGATTCCACTTCCCCGGACTTGTACCAAAACGTCATTGTTCTGCGTCACGCCGATCGTCTAGACTTCTCCGACCATTCATGGGCGGCCACGGCGGCCCGTCCATGGGACCCGCCCCTCATGGAAGAGGGCCTTGTCCGGGCCTTCAACATGGGTCGGGTCATTATGAACAATATTGGATCCCCCATCCACCGGGTTTTCGTCTCTCCCTTCCTTCGTTGCCTTCAGACGGCCGCCCAAGTTGTCGCCGCCGTCGACCATGTTTCTGCTGAAACCGCCACCCGTGATTCCGCCGCTCCCTCCCAACTCAAGGTTTTCAAGACTCTGGCTGATCAATACCATTCCCAGAATATCATGCTTGTCACTCATGGCATAGGAGTTGGAGTTGTTGTTTCTACAGTTTTGAAGGACACAAGGGTTGTTCATGTTGATTATTGTGGATATGCTATCTTGAGGAGACCCATTTTTCTCAGCGATCAAGTGATCTTCTTGTCTTTAGCTATACAAGAGCCTGTTATGACTGCCAAAGCCAATTGTTAA

Protein sequence

MDSTSPDLYQNVIVLRHADRLDFSDHSWAATAARPWDPPLMEEGLVRAFNMGRVIMNNIGSPIHRVFVSPFLRCLQTAAQVVAAVDHVSAETATRDSAAPSQLKVFKTLADQYHSQNIMLVTHGIGVGVVVSTVLKDTRVVHVDYCGYAILRRPIFLSDQVIFLSLAIQEPVMTAKANC

Homology

[Close]

BLAST of Lsi05G021850 vs. TrEMBL
Match: A0A067KAK0_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14610 PE=4 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 7.7e-24
Identity = 58/103 (56.31%), Postives = 78/103 (75.73%), Query Frame = 1


Query: 7   DLYQNVIVLRHADRLDFSDHSWAATAARPWDPPLMEEGLVRAFNMGRVIMNNIGSPIHRV 66
           + YQNV+V+RH DR+D  D  W +TAARPWDPPL+E G VRAF+ G  + ++IG PIHRV
Sbjct: 15  EFYQNVVVMRHGDRIDNFDPLWVSTAARPWDPPLVEAGRVRAFSTGNYLKSHIGFPIHRV 74

Query: 67  FVSPFLRCLQTAAQVVAAVDHV--SAETATRDSAA--PSQLKV 106
           FVSPFLRC+QTA++ V+A+  V  +++ A RD  A  PS++KV
Sbjct: 75  FVSPFLRCIQTASEAVSALCAVKDNSDAAIRDGIAIGPSKVKV 117

[Close]

BLAST of Lsi05G021850 vs. TrEMBL
Match: V4LVY2_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10006161mg PE=4 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 2.9e-23
Identity = 52/93 (55.91%), Postives = 72/93 (77.42%), Query Frame = 1


Query: 1  MDSTSPDL--YQNVIVLRHADRLDFSDHSWAATAARPWDPPLMEEGLVRAFNMGRVIMNN 60
          M+S   D+  YQN+ V+RH DR+D  +  W +TAARPWDPPL+++G++RAF  G+ I + 
Sbjct: 1  MESPKSDIDGYQNIFVMRHGDRIDNFEPLWVSTAARPWDPPLIQDGMIRAFRTGQRIRSQ 60

Query: 61 IGSPIHRVFVSPFLRCLQTAAQVVAAVDHVSAE 92
          IG PIHRVFVSPFLRC+QTA++VVAA+  V+ +
Sbjct: 61 IGFPIHRVFVSPFLRCIQTASEVVAALSAVNVD 93

[Close]

BLAST of Lsi05G021850 vs. TrEMBL
Match: D7LRQ4_ARALL (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_324496 PE=4 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 2.9e-23
Identity = 59/112 (52.68%), Postives = 84/112 (75.00%), Query Frame = 1


Query: 1   MDST--SPDLYQNVIVLRHADRLDFSDHSWAATAARPWDPPLMEEGLVRAFNMGRVIMNN 60
           M+ST  +PD YQN++++RH DR+D  D  W  TAARPWDPPL+++G+VRAF  G+ I + 
Sbjct: 1   MESTKSNPDGYQNILMMRHGDRIDQIDPLWLDTAARPWDPPLVQDGMVRAFRTGQRIRSQ 60

Query: 61  IGSPIHRVFVSPFLRCLQTAAQVVAAVDHVSAE---TATRDSAA--PSQLKV 106
           I  PIHRVFVSPF+RC+QTA++V+AA+  V  +   T+++D A+   S+LKV
Sbjct: 61  IQFPIHRVFVSPFIRCIQTASEVIAALSAVDFDPNATSSKDVASIDKSKLKV 112

[Close]

BLAST of Lsi05G021850 vs. TrEMBL
Match: Q9M215_ARATH (At3g60440 OS=Arabidopsis thaliana GN=T8B10_100 PE=2 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 6.5e-23
Identity = 52/105 (49.52%), Postives = 74/105 (70.48%), Query Frame = 1


Query: 3   STSPDLYQNVIVLRHADRLDFSDHSWAATAARPWDPPLMEEGLVRAFNMGRVIMNNIGSP 62
           S +PD YQN++++RH DR+D  D  W  TAARPWDPPL+++G+VRAF  G+ I + I  P
Sbjct: 6   SKNPDSYQNILMMRHGDRIDKIDPLWLDTAARPWDPPLVQDGMVRAFQTGQRIRSQIQFP 65

Query: 63  IHRVFVSPFLRCLQTAAQVVAAVDHVSAETATRDSAAPSQLKVFK 108
           IHRVFVSPF+RC+QTA++V+AA+  V  +     S   + +  +K
Sbjct: 66  IHRVFVSPFIRCIQTASEVIAALSAVDFDPNATSSKDVTSIDKYK 110

[Close]

BLAST of Lsi05G021850 vs. TrEMBL
Match: F4JBU0_ARATH (Phosphoglycerate mutase family protein OS=Arabidopsis thaliana GN=At3g60440 PE=4 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 6.5e-23
Identity = 52/105 (49.52%), Postives = 74/105 (70.48%), Query Frame = 1


Query: 3   STSPDLYQNVIVLRHADRLDFSDHSWAATAARPWDPPLMEEGLVRAFNMGRVIMNNIGSP 62
           S +PD YQN++++RH DR+D  D  W  TAARPWDPPL+++G+VRAF  G+ I + I  P
Sbjct: 29  SKNPDSYQNILMMRHGDRIDKIDPLWLDTAARPWDPPLVQDGMVRAFQTGQRIRSQIQFP 88

Query: 63  IHRVFVSPFLRCLQTAAQVVAAVDHVSAETATRDSAAPSQLKVFK 108
           IHRVFVSPF+RC+QTA++V+AA+  V  +     S   + +  +K
Sbjct: 89  IHRVFVSPFIRCIQTASEVIAALSAVDFDPNATSSKDVTSIDKYK 133

[Close]

BLAST of Lsi05G021850 vs. TAIR10
Match: AT3G60440.1 (AT3G60440.1 Phosphoglycerate mutase family protein)

HSP 1 Score: 115.5 bits (288), Expect = 3.3e-26
Identity = 52/105 (49.52%), Postives = 74/105 (70.48%), Query Frame = 1


Query: 3   STSPDLYQNVIVLRHADRLDFSDHSWAATAARPWDPPLMEEGLVRAFNMGRVIMNNIGSP 62
           S +PD YQN++++RH DR+D  D  W  TAARPWDPPL+++G+VRAF  G+ I + I  P
Sbjct: 29  SKNPDSYQNILMMRHGDRIDKIDPLWLDTAARPWDPPLVQDGMVRAFQTGQRIRSQIQFP 88

Query: 63  IHRVFVSPFLRCLQTAAQVVAAVDHVSAETATRDSAAPSQLKVFK 108
           IHRVFVSPF+RC+QTA++V+AA+  V  +     S   + +  +K
Sbjct: 89  IHRVFVSPFIRCIQTASEVIAALSAVDFDPNATSSKDVTSIDKYK 133

[Close]

BLAST of Lsi05G021850 vs. TAIR10
Match: AT3G60450.1 (AT3G60450.1 Phosphoglycerate mutase family protein)

HSP 1 Score: 115.2 bits (287), Expect = 4.3e-26
Identity = 51/89 (57.30%), Postives = 68/89 (76.40%), Query Frame = 1


Query: 3  STSPDLYQNVIVLRHADRLDFSDHSWAATAARPWDPPLMEEGLVRAFNMGRVIMNNIGSP 62
          S   D YQN+ V+RH DR+D  +  W +TA RPWDPPL+++G++RAF  G+ I + IG P
Sbjct: 6  SNVDDGYQNIFVMRHGDRIDNFEPLWVSTAERPWDPPLVQDGMIRAFRTGQRIRSQIGFP 65

Query: 63 IHRVFVSPFLRCLQTAAQVVAAVDHVSAE 92
          IHRVFVSPFLRCLQTA++VVAA+  V+ +
Sbjct: 66 IHRVFVSPFLRCLQTASEVVAALSAVNVD 94

[Close]

BLAST of Lsi05G021850 vs. TAIR10
Match: AT3G60420.2 (AT3G60420.2 Phosphoglycerate mutase family protein)

HSP 1 Score: 107.5 bits (267), Expect = 8.9e-24
Identity = 50/89 (56.18%), Postives = 65/89 (73.03%), Query Frame = 1


Query: 9  YQNVIVLRHADRLDFSDHSWAATAARPWDPPLMEEGLVRAFNMGRVIMNNIGSPIHRVFV 68
          +QNVI++RH DRLD  +  W +TAARPWDPPL ++G  RAF  G+ I + +G PIHRVFV
Sbjct: 11 HQNVILMRHGDRLDNFEPLWTSTAARPWDPPLAQDGKDRAFRTGQRIRSQLGVPIHRVFV 70

Query: 69 SPFLRCLQTAAQVVAAVDHVSAETATRDS 98
          SPFLRC+QTA++VVAA+  V  +     S
Sbjct: 71 SPFLRCIQTASEVVAALSAVDFDPIAMSS 99

[Close]

BLAST of Lsi05G021850 vs. NCBI nr
Match: gi|659074827|ref|XP_008437818.1| (PREDICTED: uncharacterized protein LOC103483133 isoform X2 [Cucumis melo])

HSP 1 Score: 172.9 bits (437), Expect = 4.9e-40
Identity = 83/105 (79.05%), Postives = 92/105 (87.62%), Query Frame = 1


Query: 1   MDSTSPDLYQNVIVLRHADRLDFSDHSWAATAARPWDPPLMEEGLVRAFNMGRVIMNNIG 60
           M+STSPD YQN++VLRHADRLDFSDHSW ATA RPWDPPLME+G VRAFN GR I+N++G
Sbjct: 1   MESTSPDFYQNLVVLRHADRLDFSDHSWTATADRPWDPPLMEDGFVRAFNSGRAILNDLG 60

Query: 61  SPIHRVFVSPFLRCLQTAAQVVAAVDHVSAETATRDSAAPSQLKV 106
           SPIHR+FVSPFLRCLQTAAQ+VAAV HVSA     DSAA SQLKV
Sbjct: 61  SPIHRIFVSPFLRCLQTAAQIVAAVHHVSA-----DSAATSQLKV 100

[Close]

BLAST of Lsi05G021850 vs. NCBI nr
Match: gi|659074825|ref|XP_008437817.1| (PREDICTED: uncharacterized protein LOC103483133 isoform X1 [Cucumis melo])

HSP 1 Score: 172.9 bits (437), Expect = 4.9e-40
Identity = 83/105 (79.05%), Postives = 92/105 (87.62%), Query Frame = 1


Query: 1   MDSTSPDLYQNVIVLRHADRLDFSDHSWAATAARPWDPPLMEEGLVRAFNMGRVIMNNIG 60
           M+STSPD YQN++VLRHADRLDFSDHSW ATA RPWDPPLME+G VRAFN GR I+N++G
Sbjct: 1   MESTSPDFYQNLVVLRHADRLDFSDHSWTATADRPWDPPLMEDGFVRAFNSGRAILNDLG 60

Query: 61  SPIHRVFVSPFLRCLQTAAQVVAAVDHVSAETATRDSAAPSQLKV 106
           SPIHR+FVSPFLRCLQTAAQ+VAAV HVSA     DSAA SQLKV
Sbjct: 61  SPIHRIFVSPFLRCLQTAAQIVAAVHHVSA-----DSAATSQLKV 100

[Close]

BLAST of Lsi05G021850 vs. NCBI nr
Match: gi|1012011575|ref|XP_015948208.1| (PREDICTED: uncharacterized protein LOC107473173 [Arachis duranensis])

HSP 1 Score: 129.0 bits (323), Expect = 8.1e-27
Identity = 59/106 (55.66%), Postives = 80/106 (75.47%), Query Frame = 1


Query: 4   TSPDLYQNVIVLRHADRLDFSDHSWAATAARPWDPPLMEEGLVRAFNMGRVIMNNIGSPI 63
           ++P+ YQNV+V+RH DR+D  DHSW +TAARPWDPPL+++G +RAF  G++  NN+  P+
Sbjct: 3   STPEFYQNVVVMRHGDRIDNFDHSWVSTAARPWDPPLVQQGRLRAFKTGQIFRNNLSFPL 62

Query: 64  HRVFVSPFLRCLQTAAQVVAAVDHVS----AETATRDSAAPSQLKV 106
           HRVFVSPFLRC+QTAA+VV+A+  VS    A T       PS++KV
Sbjct: 63  HRVFVSPFLRCVQTAAEVVSALSAVSDSPDALTGDAPPIDPSKIKV 108

[Close]

BLAST of Lsi05G021850 vs. NCBI nr
Match: gi|1021531370|ref|XP_016162638.1| (PREDICTED: uncharacterized protein LOC107605309 isoform X3 [Arachis ipaensis])

HSP 1 Score: 119.0 bits (297), Expect = 8.4e-24
Identity = 54/82 (65.85%), Postives = 68/82 (82.93%), Query Frame = 1


Query: 9  YQNVIVLRHADRLDFSDHSWAATAARPWDPPLMEEGLVRAFNMGRVIMNNIGSPIHRVFV 68
          YQNV+V+RHADRLD  D  WA+TAARPWDPPL+E G +RAF  GR + +++G PIHRVFV
Sbjct: 14 YQNVVVMRHADRLDNFDPCWASTAARPWDPPLLEAGRLRAFQTGRSLGHSLGYPIHRVFV 73

Query: 69 SPFLRCLQTAAQVVAAVDHVSA 91
          SPFLRC+QTA++VV+A+  V A
Sbjct: 74 SPFLRCVQTASEVVSALSTVDA 95

[Close]

BLAST of Lsi05G021850 vs. NCBI nr
Match: gi|1021531368|ref|XP_016162637.1| (PREDICTED: uncharacterized protein LOC107605309 isoform X2 [Arachis ipaensis])

HSP 1 Score: 119.0 bits (297), Expect = 8.4e-24
Identity = 54/82 (65.85%), Postives = 68/82 (82.93%), Query Frame = 1


Query: 9   YQNVIVLRHADRLDFSDHSWAATAARPWDPPLMEEGLVRAFNMGRVIMNNIGSPIHRVFV 68
           YQNV+V+RHADRLD  D  WA+TAARPWDPPL+E G +RAF  GR + +++G PIHRVFV
Sbjct: 61  YQNVVVMRHADRLDNFDPCWASTAARPWDPPLLEAGRLRAFQTGRSLGHSLGYPIHRVFV 120

Query: 69  SPFLRCLQTAAQVVAAVDHVSA 91
           SPFLRC+QTA++VV+A+  V A
Sbjct: 121 SPFLRCVQTASEVVSALSTVDA 142

The following BLAST results are available for this feature:

BLAST of Lsi05G021850 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Lsi05G021850 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A067KAK0_JATCU	7.7e-24	56.31	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14610 PE=4 SV=1	[more]
V4LVY2_EUTSA	2.9e-23	55.91	Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10006161mg PE=4 SV=1	[more]
D7LRQ4_ARALL	2.9e-23	52.68	Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRA...	[more]
Q9M215_ARATH	6.5e-23	49.52	At3g60440 OS=Arabidopsis thaliana GN=T8B10_100 PE=2 SV=1	[more]
F4JBU0_ARATH	6.5e-23	49.52	Phosphoglycerate mutase family protein OS=Arabidopsis thaliana GN=At3g60440 PE=4...	[more]

BLAST of Lsi05G021850 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G60440.1	3.3e-26	49.52	Phosphoglycerate mutase family protein	[more]
AT3G60450.1	4.3e-26	57.30	Phosphoglycerate mutase family protein	[more]
AT3G60420.2	8.9e-24	56.18	Phosphoglycerate mutase family protein	[more]

BLAST of Lsi05G021850 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659074827\|ref\|XP_008437818.1\|	4.9e-40	79.05	PREDICTED: uncharacterized protein LOC103483133 isoform X2 [Cucumis melo]	[more]
gi\|659074825\|ref\|XP_008437817.1\|	4.9e-40	79.05	PREDICTED: uncharacterized protein LOC103483133 isoform X1 [Cucumis melo]	[more]
gi\|1012011575\|ref\|XP_015948208.1\|	8.1e-27	55.66	PREDICTED: uncharacterized protein LOC107473173 [Arachis duranensis]	[more]
gi\|1021531370\|ref\|XP_016162638.1\|	8.4e-24	65.85	PREDICTED: uncharacterized protein LOC107605309 isoform X3 [Arachis ipaensis]	[more]
gi\|1021531368\|ref\|XP_016162637.1\|	8.4e-24	65.85	PREDICTED: uncharacterized protein LOC107605309 isoform X2 [Arachis ipaensis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR013078	His_Pase_superF_clade-1

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi05G021850.1	Lsi05G021850.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013078	Histidine phosphatase superfamily, clade-1	PFAM	PF00300	His_Phos_1	coord: 13..88 score: 2.
None	No IPR available	PANTHER	PTHR16469	FAMILY NOT NAMED	coord: 1..105 score: 8.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi05G021850	Csa3G118040	Cucumber (Chinese Long) v2	culsiB209
Lsi05G021850	CSPI03G07400	Wild cucumber (PI 183967)	cpilsiB207
Lsi05G021850	Cucsa.259740	Cucumber (Gy14) v1	cgylsiB415
Lsi05G021850	CmoCh06G009970	Cucurbita moschata (Rifu)	cmolsiB758
Lsi05G021850	Cla021103	Watermelon (97103) v1	lsiwmB365
Lsi05G021850	MELO3C005974	Melon (DHL92) v3.5.1	lsimeB378
Lsi05G021850	ClCG05G000360	Watermelon (Charleston Gray)	lsiwcgB335
Lsi05G021850	MELO3C005974.2	Melon (DHL92) v3.6.1	lsimedB396
Lsi05G021850	Cla97C05G080330	Watermelon (97103) v2	lsiwmbB333
Lsi05G021850	Bhi01G000415	Wax gourd	lsiwgoB433
Lsi05G021850	Cp4.1LG08g00470	Cucurbita pepo (Zucchini)	cpelsiB714
Lsi05G021850	CsGy3G007520	Cucumber (Gy14) v2	cgyblsiB196
Lsi05G021850	Carg24161	Silver-seed gourd	carlsiB088
Lsi05G021850	CsaV3_3G007520	Cucumber (Chinese Long) v3	cuclsiB228

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi05G021850	Cucurbita maxima (Rimu)	cmalsiB245
Lsi05G021850	Cucurbita moschata (Rifu)	cmolsiB233
Lsi05G021850	Cucurbita pepo (Zucchini)	cpelsiB506
Lsi05G021850	Silver-seed gourd	carlsiB119