Carg24161 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATTACAACCTTTTCTTTCACGTCTTTTCCTACTAAAAAAAAAAAGAAAAAAAAAATGAGCATCTCCGATATCGACGCCGTACCCAACGGCCACTCGGAGGCGCCGGAGTTTTACCAAAACGTCGTCGTTATGCGTCACGGCGATCGCTTCGACAACTTCGAACGCTCATGGACGGCCACTGCATCCCGCCCGTGGGACCCGCCCCTTTACAAGGACGGCTTGGTTCGAGCCTTCGATACGGGTCGGACTTTTCTCGACCTTCTCGGGTTTCCTTTTCACCGGGTTTTCGTTTCCCCTTTCCTCCGCTGCGTCCAGACCGCCGCCCAAGTCATCGAAGCCCTGTCTGACGGCGCCGACAGCAACCCTTCCAGTCCTAAGGTCAGGCAAATTTCCCGATACACATGAAACCATCACATCAAATTGTGTTTTATTTTTGTTTATCGGTGGTTGACTTTTCTTTCTCCTCAAGTTATGGTTCTAGAAATTTACGAAATTGTTTGTGGGTTTTGAATGTTTGTTTGAGGGATTTGATGGGTCATTTCTCATTTGGCATTTTCGGACATGGATTAATAACATTAACAATACTAATATGTTCTAATAAATAAGCTTCAAATTGAAGGCCATCTGGAATTGGGTGATAATTTGTCGTTTTGGAGGCCACCCAGTTCCAAACCTCTGCTATCTTCATTTTTCATTCTTAACTTAATATCTTTCAATTTTCATTGGTAACAGCCTAAGTCCGGATTGAAATTTAGCTAGCGATAGAGCTCCAAGCTCAAGCTCACTGCTAATGGATATTGTCTTTTTTGAGCTCTCCTTCCAGGGTCATACGGTCCTCTTTAGGCTTTCCCTCCAGTTTTAAAACGAGTCTCCTAGTAGGAGGTTTCGACGCCCTTATAAAGAGTGATGTGTGATCTCACAATCCACCCTTCTTGAAAACCCAATGTCCTCGCTGACACTCGTTTCTCTCTTTCAATTGACGTGGATCTCACAACCCCTTCAAGGCCCATTGTCTTTGTTGGCATACGGTTCAGTATCTAGCTTTAATATCAATTTTAACCGCCCAAGACCCCCAACGTCTTCGTTGGCACATCGTTCAATGTCTAGCTCTGATACCATTTGTAACAGCTTGAGCCTATTACTAACAGATATTATCGTCTTTGAACTTTTCTTTCTAGACTTCTCCAAAATTTTAAAACGTATGGCGGGGACTGGGAGAGGGGAATGACAGGTGTTTAAGAACTTATTTGAACACATAATATCACTTTTCAAACACTTGAAAGGCTATTCCAAATTAGCCATTAATTTGATTTGCTTATCTGGTCAAAAAGGCATCATGGTTTAGTTTTTGATTAGGTGAAAGACCCAACTGGGATCGCCCACAATACAAATAGTCATTGACATTGACAGATGAAGATGACATCTCCTTTGTTATATAGCTAGCCTGCAGTATTATTTGAAAAAAGCGTTGAAAAGGTCTTCTCAACTTTTCAACACACAAGGATTTGTCTTTTGGTGCTCAAAAATTCATTTCAATACTTGCTAGCTGCTTCAAATGATCCTCTAATTGTCTTGCTTTTGAATGGTAAAACTTGTTGTGATCTGTTCAACGAGTTTAAAAGTCAAATTAGACGGTTAATGATGACTCTATGTAACGATTCAAGTCCACCGCTAGCAAATATTGTGTTCATTAGACTTTCCCTTTCAAGCTTCCTCTCAAGGTTTCTAAACCGCGTCTACTAGAGAGAGGTTTCCACACTCTTATGAGGAATGATTTGTTCTCATCTCCAACCGATGTAGGATCTCACAATCCACCCTCCTTAGAGGCCCAACGTTCTCGCTGGCACACCGCTCGGTGTCTAACTCTGATACCATTTATAACGGCTCAAGCCCACCACTAGTAGATATTGTCTTTCTTTCGGGCTTCCCCTCAAAGTTTTAAAACGTGTCTACTAGAGAGAGGTTTCTACACCCTTATAAAGAATGTTTCATTCTCCTCTCCACCCGACGTGGGACCTCAGAAATTAGTTTCACTTTTCTCAGTCTTCACTTGCTTTTATTTCGTCTTATAAATGATATGAACATTAGAACAAGTCTTGAGCTGAAAAGTATGACTCCAAAGTTGATTTCAGATTATGCACAAGTTTCTTTTTGTACAGTTCATCATTCAAATGCTGAATTTTGAGTTGGGATATCACTGTAGGTTTCAATAGAGTATGGACTGTGTGAGATGCTAACCAATGAAGCAATCAGGCCTAATGTTGAACCAAAGGATAGGAACTGGGATTTCGATATCCCTCAGCTTGAAGCCATTTTACCCGTCGGGACGGTTGACCATTCTATAGAACGTGTCTATAAAGAGGTACGTAAACAAAATCGTTATCAAACGAAGCTTCAACCCGTTTAAGTAAACAATATTTCTCAAAAACTTCAGATGCTTCCATGGGAAGGATCAGCAGCAGTTACTCATCGTCGGTACGTCCAACTATTCCATACGCTTGCCGATAAATACCCGACGGAGAACTTGCTACTTGTCACACATGGTAAGTAGTATTTTCGGTTGCTGCCATAACTCGTCCGTCGTCCTTATAGGTTGCCCTTATGACGTTGTTTGTTCATCGGTGTGCTTTTAGGCGAAGCGGTTGGAGTTGCAGTTTCGACGTTCATGGAAGATGTACTCGTATATGGAGTCGAGTACTGTGCATTTGTTCAGCTGCAAAGGCCTGTTTTTCGGAGAGGCGATTCGTATGTGTTCGGAAAATTTGAGGTGAAATTGAGAAATGATGGGAAAGATGGAATCAAACACATGCCAAAGCCAGAAAAAGAATGAGATCATCATATGTTTCATTGGGAATAAACTGCCAGACTCTTTCTATTATTTGCTTATGCTTTGATTCTGTGATGCAACTCTTTTTTTGTGTTTCTTTGAATAAATGAGTCTGGATTGTTGATTTTGTTATGAACAGTGATGATATGATACTGATTATTGTGAAGGAGAGTAAAAGAAAGTGATATGATACTCATTATTTCCCAAATGCGTATGTCTTAGTTCATGTTAATGTAACAATT ATTACAACCTTTTCTTTCACGTCTTTTCCTACTAAAAAAAAAAAGAAAAAAAAAATGAGCATCTCCGATATCGACGCCGTACCCAACGGCCACTCGGAGGCGCCGGAGTTTTACCAAAACGTCGTCGTTATGCGTCACGGCGATCGCTTCGACAACTTCGAACGCTCATGGACGGCCACTGCATCCCGCCCGTGGGACCCGCCCCTTTACAAGGACGGCTTGGTTCGAGCCTTCGATACGGGTCGGACTTTTCTCGACCTTCTCGGGTTTCCTTTTCACCGGGTTTTCGTTTCCCCTTTCCTCCGCTGCGTCCAGACCGCCGCCCAAGTCATCGAAGCCCTGTCTGACGGCGCCGACAGCAACCCTTCCAGTCCTAAGGTTTCAATAGAGTATGGACTGTGTGAGATGCTAACCAATGAAGCAATCAGGCCTAATGTTGAACCAAAGGATAGGAACTGGGATTTCGATATCCCTCAGCTTGAAGCCATTTTACCCGTCGGGACGGTTGACCATTCTATAGAACGTGTCTATAAAGAGATGCTTCCATGGGAAGGATCAGCAGCAGTTACTCATCGTCGGTACGTCCAACTATTCCATACGCTTGCCGATAAATACCCGACGGAGAACTTGCTACTTGTCACACATGGCGAAGCGGTTGGAGTTGCAGTTTCGACGTTCATGGAAGATGTACTCGTATATGGAGTCGAGTACTGTGCATTTGTTCAGCTGCAAAGGCCTGTTTTTCGGAGAGGCGATTCGTATGTGTTCGGAAAATTTGAGGTGAAATTGAGAAATGATGGGAAAGATGGAATCAAACACATGCCAAAGCCAGAAAAAGAATGAGATCATCATATGTTTCATTGGGAATAAACTGCCAGACTCTTTCTATTATTTGCTTATGCTTTGATTCTGTGATGCAACTCTTTTTTTGTGTTTCTTTGAATAAATGAGTCTGGATTGTTGATTTTGTTATGAACAGTGATGATATGATACTGATTATTGTGAAGGAGAGTAAAAGAAAGTGATATGATACTCATTATTTCCCAAATGCGTATGTCTTAGTTCATGTTAATGTAACAATT ATGAGCATCTCCGATATCGACGCCGTACCCAACGGCCACTCGGAGGCGCCGGAGTTTTACCAAAACGTCGTCGTTATGCGTCACGGCGATCGCTTCGACAACTTCGAACGCTCATGGACGGCCACTGCATCCCGCCCGTGGGACCCGCCCCTTTACAAGGACGGCTTGGTTCGAGCCTTCGATACGGGTCGGACTTTTCTCGACCTTCTCGGGTTTCCTTTTCACCGGGTTTTCGTTTCCCCTTTCCTCCGCTGCGTCCAGACCGCCGCCCAAGTCATCGAAGCCCTGTCTGACGGCGCCGACAGCAACCCTTCCAGTCCTAAGGTTTCAATAGAGTATGGACTGTGTGAGATGCTAACCAATGAAGCAATCAGGCCTAATGTTGAACCAAAGGATAGGAACTGGGATTTCGATATCCCTCAGCTTGAAGCCATTTTACCCGTCGGGACGGTTGACCATTCTATAGAACGTGTCTATAAAGAGATGCTTCCATGGGAAGGATCAGCAGCAGTTACTCATCGTCGGTACGTCCAACTATTCCATACGCTTGCCGATAAATACCCGACGGAGAACTTGCTACTTGTCACACATGGCGAAGCGGTTGGAGTTGCAGTTTCGACGTTCATGGAAGATGTACTCGTATATGGAGTCGAGTACTGTGCATTTGTTCAGCTGCAAAGGCCTGTTTTTCGGAGAGGCGATTCGTATGTGTTCGGAAAATTTGAGGTGAAATTGAGAAATGATGGGAAAGATGGAATCAAACACATGCCAAAGCCAGAAAAAGAATGA MSISDIDAVPNGHSEAPEFYQNVVVMRHGDRFDNFERSWTATASRPWDPPLYKDGLVRAFDTGRTFLDLLGFPFHRVFVSPFLRCVQTAAQVIEALSDGADSNPSSPKVSIEYGLCEMLTNEAIRPNVEPKDRNWDFDIPQLEAILPVGTVDHSIERVYKEMLPWEGSAAVTHRRYVQLFHTLADKYPTENLLLVTHGEAVGVAVSTFMEDVLVYGVEYCAFVQLQRPVFRRGDSYVFGKFEVKLRNDGKDGIKHMPKPEKE
BLAST of Carg24161 vs. NCBI nr
Match: XP_022944754.1 (uncharacterized protein LOC111449111 [Cucurbita moschata]) HSP 1 Score: 545.8 bits (1405), Expect = 7.9e-152 Identity = 261/262 (99.62%), Postives = 262/262 (100.00%), Query Frame = 0
BLAST of Carg24161 vs. NCBI nr
Match: XP_023540071.1 (uncharacterized protein LOC111800554 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 539.3 bits (1388), Expect = 7.4e-150 Identity = 258/262 (98.47%), Postives = 261/262 (99.62%), Query Frame = 0
BLAST of Carg24161 vs. NCBI nr
Match: XP_022975437.1 (ubiquitin-associated and SH3 domain-containing protein A-like [Cucurbita maxima] >XP_022975446.1 ubiquitin-associated and SH3 domain-containing protein A-like [Cucurbita maxima]) HSP 1 Score: 535.4 bits (1378), Expect = 1.1e-148 Identity = 257/262 (98.09%), Postives = 259/262 (98.85%), Query Frame = 0
BLAST of Carg24161 vs. NCBI nr
Match: XP_008437819.1 (PREDICTED: uncharacterized protein LOC103483134 [Cucumis melo]) HSP 1 Score: 427.2 bits (1097), Expect = 4.1e-116 Identity = 209/258 (81.01%), Postives = 230/258 (89.15%), Query Frame = 0
BLAST of Carg24161 vs. NCBI nr
Match: XP_004133778.1 (PREDICTED: uncharacterized protein LOC101221665 [Cucumis sativus] >KGN56369.1 hypothetical protein Csa_3G118040 [Cucumis sativus]) HSP 1 Score: 412.1 bits (1058), Expect = 1.4e-111 Identity = 200/258 (77.52%), Postives = 229/258 (88.76%), Query Frame = 0
BLAST of Carg24161 vs. TAIR10
Match: AT3G60450.1 (Phosphoglycerate mutase family protein) HSP 1 Score: 260.8 bits (665), Expect = 9.2e-70 Identity = 130/258 (50.39%), Postives = 165/258 (63.95%), Query Frame = 0
BLAST of Carg24161 vs. TAIR10
Match: AT3G60440.1 (Phosphoglycerate mutase family protein) HSP 1 Score: 245.4 bits (625), Expect = 4.0e-65 Identity = 128/255 (50.20%), Postives = 167/255 (65.49%), Query Frame = 0
BLAST of Carg24161 vs. TAIR10
Match: AT3G60420.2 (Phosphoglycerate mutase family protein) HSP 1 Score: 206.8 bits (525), Expect = 1.6e-53 Identity = 131/342 (38.30%), Postives = 166/342 (48.54%), Query Frame = 0
BLAST of Carg24161 vs. Swiss-Prot
Match: sp|Q3V3E1|UBS3A_MOUSE (Ubiquitin-associated and SH3 domain-containing protein A OS=Mus musculus OX=10090 GN=Ubash3a PE=1 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 2.8e-07 Identity = 55/194 (28.35%), Postives = 84/194 (43.30%), Query Frame = 0
BLAST of Carg24161 vs. Swiss-Prot
Match: sp|P57075|UBS3A_HUMAN (Ubiquitin-associated and SH3 domain-containing protein A OS=Homo sapiens OX=9606 GN=UBASH3A PE=1 SV=1) HSP 1 Score: 53.9 bits (128), Expect = 3.1e-06 Identity = 55/219 (25.11%), Postives = 85/219 (38.81%), Query Frame = 0
BLAST of Carg24161 vs. TrEMBL
Match: tr|A0A1S3AV13|A0A1S3AV13_CUCME (uncharacterized protein LOC103483134 OS=Cucumis melo OX=3656 GN=LOC103483134 PE=4 SV=1) HSP 1 Score: 427.2 bits (1097), Expect = 2.7e-116 Identity = 209/258 (81.01%), Postives = 230/258 (89.15%), Query Frame = 0
BLAST of Carg24161 vs. TrEMBL
Match: tr|A0A0A0L5Q1|A0A0A0L5Q1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G118040 PE=4 SV=1) HSP 1 Score: 412.1 bits (1058), Expect = 9.0e-112 Identity = 200/258 (77.52%), Postives = 229/258 (88.76%), Query Frame = 0
BLAST of Carg24161 vs. TrEMBL
Match: tr|I1KJM9|I1KJM9_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100811704 PE=4 SV=1) HSP 1 Score: 300.8 bits (769), Expect = 2.9e-78 Identity = 147/258 (56.98%), Postives = 184/258 (71.32%), Query Frame = 0
BLAST of Carg24161 vs. TrEMBL
Match: tr|A0A0B2RMX8|A0A0B2RMX8_GLYSO (Uncharacterized protein OS=Glycine soja OX=3848 GN=glysoja_026116 PE=4 SV=1) HSP 1 Score: 300.8 bits (769), Expect = 2.9e-78 Identity = 147/258 (56.98%), Postives = 184/258 (71.32%), Query Frame = 0
BLAST of Carg24161 vs. TrEMBL
Match: tr|A0A2N9HLT4|A0A2N9HLT4_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS42999 PE=4 SV=1) HSP 1 Score: 300.1 bits (767), Expect = 5.0e-78 Identity = 146/251 (58.17%), Postives = 177/251 (70.52%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|