Lsi05G021210 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: five_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.GGTTAGGTCAAACTCGAAAGCCCAAGAATCCCATTACCAACCAACTTGACAAAGAAGAACAAAACCATAGCACCGTAATTGGGTAAAATGGCGGATTGTCAATGGTTGCAGTGACCATCTCAATCCTGTAAAGCGTAAAATCCTTTCTCTTCTTCACGCGCACACTCTCCGGAGGTACTAGAATACTGATTTTTTACTCTCCCAAGTTGCAGAAGAAAACATAGCCACAATTACAAACAACCCTTCTTCAACTTCTCGCTTTCTTTCTCTCTCGACTTCCCTTTTTCCCCATGCTGTTTAGCTAGTTCATCATCCTATTGGGATTTTACGGGGAGAACTTTTGTCTTTTCAACTTGAATTTTGCCGCTTTCGTCTCTAAATGGCCGATGTTTTTAGATTCTCGTCGCATTCCTTCTATTTCTCCTCCAGTTCTTTACCACCCTCCTTTGCCTCGTCTTACAATTCCCTTCATCCTTCTCTTCCACCCATTCATAACCCAGATAAGAGGTCGAGTCCTCTACCATGTTATTCCACTAGCTATGTAATGCCTCTTTCTTTCAGACCCAGAAAGAGGTTGGTATCTTTCAAGGTACATAACTTATCTTGTGGTCGGATCTTTATTGTATGATTGTTAATTTTTTAGATTTTTGTTATATATCGAGTAAATTTGTGGCAATTGTTTAGTAATAATGTGTTCGATGGCAATTAACAGTAGTTTTTATATGTGAATTTTGTTATATTAGTGTACCTACCCCTCAATAATTGTGCGCTTTCGCGCTTGCCTGATGATGCCAGGATGAGTCTGTTTGTTGGGGTTGTTTGAATTTGATTTTCAATTTGAAGTTTCATGTGCCGAATTGCTATACGGGCAGATTCTATGGAACCCTAATGGGGAAGGACCAGAGAAAAAGGGTGGATTCTTTTTATGAGTTCTCCGAGAAAGGAAGTTTTACGGCTGTCAGTATTGCCATGGCAATGGAGCCAGCTGCTTGTATGGACTAA GGTTAGGTCAAACTCGAAAGCCCAAGAATCCCATTACCAACCAACTTGACAAAGAAGAACAAAACCATAGCACCGTAATTGGGTAAAATGGCGGATTGTCAATGGTTGCAGTGACCATCTCAATCCTGTAAAGCGTAAAATCCTTTCTCTTCTTCACGCGCACACTCTCCGGAGGTACTAGAATACTGATTTTTTACTCTCCCAAGTTGCAGAAGAAAACATAGCCACAATTACAAACAACCCTTCTTCAACTTCTCGCTTTCTTTCTCTCTCGACTTCCCTTTTTCCCCATGCTGTTTAGCTAGTTCATCATCCTATTGGGATTTTACGGGGAGAACTTTTGTCTTTTCAACTTGAATTTTGCCGCTTTCGTCTCTAAATGGCCGATGTTTTTAGATTCTCGTCGCATTCCTTCTATTTCTCCTCCAGTTCTTTACCACCCTCCTTTGCCTCGTCTTACAATTCCCTTCATCCTTCTCTTCCACCCATTCATAACCCAGATAAGAGGTCGAGTCCTCTACCATGTTATTCCACTAGCTATGTAATGCCTCTTTCTTTCAGACCCAGAAAGAGGTTGGTATCTTTCAAGTTTCATGTGCCGAATTGCTATACGGGCAGATTCTATGGAACCCTAATGGGGAAGGACCAGAGAAAAAGGGTGGATTCTTTTTATGAGTTCTCCGAGAAAGGAAGTTTTACGGCTGTCAGTATTGCCATGGCAATGGAGCCAGCTGCTTGTATGGACTAA ATGGCCGATGTTTTTAGATTCTCGTCGCATTCCTTCTATTTCTCCTCCAGTTCTTTACCACCCTCCTTTGCCTCGTCTTACAATTCCCTTCATCCTTCTCTTCCACCCATTCATAACCCAGATAAGAGGTCGAGTCCTCTACCATGTTATTCCACTAGCTATGTAATGCCTCTTTCTTTCAGACCCAGAAAGAGGTTGGTATCTTTCAAGTTTCATGTGCCGAATTGCTATACGGGCAGATTCTATGGAACCCTAATGGGGAAGGACCAGAGAAAAAGGGTGGATTCTTTTTATGAGTTCTCCGAGAAAGGAAGTTTTACGGCTGTCAGTATTGCCATGGCAATGGAGCCAGCTGCTTGTATGGACTAA MADVFRFSSHSFYFSSSSLPPSFASSYNSLHPSLPPIHNPDKRSSPLPCYSTSYVMPLSFRPRKRLVSFKFHVPNCYTGRFYGTLMGKDQRKRVDSFYEFSEKGSFTAVSIAMAMEPAACMD
BLAST of Lsi05G021210 vs. TrEMBL
Match: A0A0A0L760_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G119600 PE=4 SV=1) HSP 1 Score: 127.9 bits (320), Expect = 8.6e-27 Identity = 63/70 (90.00%), Postives = 68/70 (97.14%), Query Frame = 1
BLAST of Lsi05G021210 vs. NCBI nr
Match: gi|659074981|ref|XP_008437900.1| (PREDICTED: thioredoxin-like 2, chloroplastic [Cucumis melo]) HSP 1 Score: 128.3 bits (321), Expect = 9.4e-27 Identity = 63/70 (90.00%), Postives = 67/70 (95.71%), Query Frame = 1
BLAST of Lsi05G021210 vs. NCBI nr
Match: gi|449432052|ref|XP_004133814.1| (PREDICTED: thioredoxin-like 2, chloroplastic [Cucumis sativus]) HSP 1 Score: 127.9 bits (320), Expect = 1.2e-26 Identity = 63/70 (90.00%), Postives = 68/70 (97.14%), Query Frame = 1
BLAST of Lsi05G021210 vs. NCBI nr
Match: gi|645274584|ref|XP_008242407.1| (PREDICTED: thioredoxin-like 2, chloroplastic [Prunus mume]) HSP 1 Score: 63.2 bits (152), Expect = 3.7e-07 Identity = 42/70 (60.00%), Postives = 46/70 (65.71%), Query Frame = 1
BLAST of Lsi05G021210 vs. NCBI nr
Match: gi|658005125|ref|XP_008337697.1| (PREDICTED: thioredoxin-like 2, chloroplastic [Malus domestica]) HSP 1 Score: 59.3 bits (142), Expect = 5.4e-06 Identity = 41/70 (58.57%), Postives = 45/70 (64.29%), Query Frame = 1
BLAST of Lsi05G021210 vs. NCBI nr
Match: gi|694323114|ref|XP_009352642.1| (PREDICTED: thioredoxin-like 2, chloroplastic isoform X1 [Pyrus x bretschneideri]) HSP 1 Score: 58.9 bits (141), Expect = 7.0e-06 Identity = 40/70 (57.14%), Postives = 45/70 (64.29%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |