Lsi05G017560 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi05G017560
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionPeptide transporter
Locationchr05 : 24951471 .. 24953957 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAGTAAGTGATCCAGAAAAGTCTTGCTCAATTATTTTTATCCATTTCTTAGTCAAAACTAAAATTGAATACCAGATATAAATTTAAAAGATATTTTTAATTGTTTTAGTAACAAAGGTTGAAAATATCTTAGTAGTAAGACCAACTTGTGTATTTTTAACTTGTATGTTTTTTTAGTAGATAAAATCATATACATTAAATTTTAATTTTGGTATGTATATGGAATTTTAAATTTATCAGTTTCTATTTTCTTTTATCTAATTTTAGGATGTTTAATTTAGTCACTCAACTCATAACTTAATAGATCATAAGACATAGACATATACATAATACTTATATACAGATTATTAAAATTCACATCATTATAGTCACCTCATTAAATATTGAGTAATACTTGAGTGCAGCATATGTTGTACCTATCTCCATGTATTCTCTTTAATAACAAAGGAAAGAAATGATTAAAAAATAGAAAAGTTTACCACATAGCAAATTGTGATAACACTTGAGTAAACTGTACGAAAATTAGTGCAGCCTGAGATGCGCATCAAGTATTTTTTTTTTTAATATTTTTTAATTGCAATTTTCCTTTAAAAAAAAAATTTGGGTTGACTAATGGTGAGAGAGAGAGGATGTGTGTAGTATATAAAAGGATGAAGTAGGAGTTGGGTCTTTACTACTCATAGAGTTTGAGTTGTAAAGTTGAACAAAAGCTAAGGCTTAAAATTTCAACGTTTCTAAACCCAAGAAGTTGTAGTAATAATATGGTTGCTTCTGCTGCTGAAGAAACTGGCCTTGACGACTACACCAAAGATGGAACCGTCGATCTCAAAGGCAACCTCATCCTCCGCTCCCGACGTGGCCGTTGGAAAGCTTGCTCCTTCATCGTCGGTAAGTGTTACACTCTGCTCGAGATTACTTTCCTGAACTTAAGACAAACAAATAGGCTCAATTATTGTCGTCACAGTTCATCTTAAGTTTACTTGGTATAGTAATCTAGGATGCAGTTTGGAAAATTCTTATATGAGTTACTTACAGTATACGAAGTGTTTGAACGGATGGCGTATTACGGGATATCGACAAATCTAATAATATACTTAACGAAGAAGTTGCATCAAGGCACAGTGACATCGGCCAACAATGTCACCAACTGGTCTGGAACTGTTTGGATGATGCCAATCTTGGGGGCGTACGTCGCTGATGCTCATCTTGGCCGCTACCGAACCTTTCTTGTCGCTTCCGCCATCTGCTTTACGGTATGTTTCTTAACCAACTAATCTATTTTGCGCACCCCCAAGATATAATGAGTCTCATAAATTCATTGGTCTTATCCATTGCAATTCTTTAGCTATCTCGTTCATTGTTTCTCTTCTTTAATAGAACAATGGGACAACAAAATTAATTTCTTACCTAGCTTGCATTTTTACACTTCAAAGATATGCACGTTTTAGTTCATTTTAATTGAATTAAACGAGTGACAGTGAGGCAAGATTTGATTTTATGACATTTTAATTGAAGATATATATATATACACACACTAACCAGTTTGGTTATAGTGACCAAGTTGACAAATAAAGTTAATTAAATATATGGTTCAATTGGTCATTCTATCACTTGAAATTTGAAATTTGAAATTTTTCGGTTTTTATTTTTGAAGTACAAAGTTAACAAGATAAAACCACAATCTAGCCTATATAAATATAAGAGCTAGATAGGCTTGGACGATGACATATTATAAAATTTTAAAAGTGCCATAACCAAATAAATACAATATCAAGATTGGTGAGAAAAAATTTAAAATATAAAATTTAAATAAACATAACATTAAAAAAATATATAAGAACTAAATAAACAAATATTTGAAAATTTAGAAATATCTTAAAAACCTTTTAAAATTTACAAACGAGATAGATACAACTTTGAAAAGTTTAATGACTTGTTTCTAATATTTTAAAGTATAAGAAGACGTAAAAAAACAGGTGAAAATAATACTTTAAAATATCTACCTCAAAACTAAAAGAACTCTAATTAACTCTAACGTTAAGATCTCATTTCTTTTCTTTTTCTTTCACGATATCGTGTTCCCTGGAAAGAGACACAGTTATCTAAAAATATTATATTACCTACTAATTTTTTTTTATAAAAAAGTATTAATGTAAATGTAAGTGGATGTGTGTATATATATTTATAGACAAGATAAGTACATAATGAATCATAATTAAATCCTTCTGTTCTAAATTAGATTAAGGTTAAAATATTTTTAGATCACAGTTCAACACGAGGTATACAAGTATATAGTCAGTAAACGTATTTATTATTAAATTTCATTACAATTAGAATCTTTCAAATCTATTCAGTACGATGTCCATTTATATTTTCATATTGTAATATTAAAAAATAATCACATAATTTACATTTTTAAAAAAAAATTGATACCATGTGGAGTATTTATTTTTGTAGTGTTGGTCTTTGAGAAGGGAATCATAG

mRNA sequence

ATGAAAAGTTTGAGTTGTAAAGTTGAACAAAAGCTAAGGCTTAAAATTTCAACGTTTCTAAACCCAAGAAGTTGTAGTAATAATATGGTTGCTTCTGCTGCTGAAGAAACTGGCCTTGACGACTACACCAAAGATGGAACCGTCGATCTCAAAGGCAACCTCATCCTCCGCTCCCGACGTGGCCGTTGGAAAGCTTGCTCCTTCATCGTCGTATACGAAGTGTTTGAACGGATGGCGTATTACGGGATATCGACAAATCTAATAATATACTTAACGAAGAAGTTGCATCAAGGCACAGTGACATCGGCCAACAATGTCACCAACTGGTCTGGAACTGTTTGGATGATGCCAATCTTGGGGGCGTACGTCGCTGATGCTCATCTTGGCCGCTACCGAACCTTTCTTGTCGCTTCCGCCATCTGCTTTACGATCACAGTTCAACACGAGTGTTGGTCTTTGAGAAGGGAATCATAG

Coding sequence (CDS)

ATGAAAAGTTTGAGTTGTAAAGTTGAACAAAAGCTAAGGCTTAAAATTTCAACGTTTCTAAACCCAAGAAGTTGTAGTAATAATATGGTTGCTTCTGCTGCTGAAGAAACTGGCCTTGACGACTACACCAAAGATGGAACCGTCGATCTCAAAGGCAACCTCATCCTCCGCTCCCGACGTGGCCGTTGGAAAGCTTGCTCCTTCATCGTCGTATACGAAGTGTTTGAACGGATGGCGTATTACGGGATATCGACAAATCTAATAATATACTTAACGAAGAAGTTGCATCAAGGCACAGTGACATCGGCCAACAATGTCACCAACTGGTCTGGAACTGTTTGGATGATGCCAATCTTGGGGGCGTACGTCGCTGATGCTCATCTTGGCCGCTACCGAACCTTTCTTGTCGCTTCCGCCATCTGCTTTACGATCACAGTTCAACACGAGTGTTGGTCTTTGAGAAGGGAATCATAG

Protein sequence

MKSLSCKVEQKLRLKISTFLNPRSCSNNMVASAAEETGLDDYTKDGTVDLKGNLILRSRRGRWKACSFIVVYEVFERMAYYGISTNLIIYLTKKLHQGTVTSANNVTNWSGTVWMMPILGAYVADAHLGRYRTFLVASAICFTITVQHECWSLRRES
Homology
[Close]
BLAST of Lsi05G017560 vs. Swiss-Prot
Match: PTR4_ARATH (Protein NRT1/ PTR FAMILY 5.3 OS=Arabidopsis thaliana GN=NPF5.3 PE=2 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 3.2e-43
Identity = 82/106 (77.36%), Postives = 94/106 (88.68%), Query Frame = 1 

Query: 35  EETGLDDYTKDGTVDLKGNLILRSRRGRWKACSFIVVYEVFERMAYYGISTNLIIYLTKK 94
           EE G DDYTKDGTVDL+GN + RS+ GRWKACSF+VVYEVFERMAYYGIS+NL+IY+T K
Sbjct: 4   EEVG-DDYTKDGTVDLRGNRVRRSQTGRWKACSFVVVYEVFERMAYYGISSNLVIYMTTK 63

Query: 95  LHQGTVTSANNVTNWSGTVWMMPILGAYVADAHLGRYRTFLVASAI 141
           LHQGTV S+NNVTNW GT W+ PILGAYVADAH GRY TF+++SAI
Sbjct: 64  LHQGTVKSSNNVTNWVGTSWLTPILGAYVADAHFGRYITFVISSAI 108

[Close]
BLAST of Lsi05G017560 vs. Swiss-Prot
Match: PTR3_ARATH (Protein NRT1/ PTR FAMILY 5.2 OS=Arabidopsis thaliana GN=NPF5.2 PE=2 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 1.7e-41
Identity = 82/109 (75.23%), Postives = 93/109 (85.32%), Query Frame = 1 

Query: 35  EETGLDDYTKDGTVDLKGNLILRSRRGRWKACSFIVVYEVFERMAYYGISTNLIIYLTKK 94
           EE G DDYTKDGTVDL+GN + RS RGRWKACSF+VVYEVFERMAYYGIS+NL IY+T K
Sbjct: 4   EEVG-DDYTKDGTVDLQGNPVRRSIRGRWKACSFVVVYEVFERMAYYGISSNLFIYMTTK 63

Query: 95  LHQGTVTSANNVTNWSGTVWMMPILGAYVADAHLGRYRTFLVASAICFT 144
           LHQGTV S+NNVTNW GT W+ PILGAYV DA LGRY TF+++ AI F+
Sbjct: 64  LHQGTVKSSNNVTNWVGTSWLTPILGAYVGDALLGRYITFVISCAIYFS 111

[Close]
BLAST of Lsi05G017560 vs. Swiss-Prot
Match: PTR30_ARATH (Protein NRT1/ PTR FAMILY 5.1 OS=Arabidopsis thaliana GN=NPF5.1 PE=2 SV=2)

HSP 1 Score: 139.0 bits (349), Expect = 4.3e-32
Identity = 59/99 (59.60%), Postives = 81/99 (81.82%), Query Frame = 1 

Query: 42  YTKDGTVDLKGNLILRSRRGRWKACSFIVVYEVFERMAYYGISTNLIIYLTKKLHQGTVT 101
           YT+DGTVDL+G  +L S+ GRW+ACSF++ YE FERMA+YGI++NL+ YLTK+LH+ T++
Sbjct: 7   YTQDGTVDLQGRPVLASKTGRWRACSFLLGYEAFERMAFYGIASNLVNYLTKRLHEDTIS 66

Query: 102 SANNVTNWSGTVWMMPILGAYVADAHLGRYRTFLVASAI 141
           S  NV NWSG VW+ PI GAY+AD+++GR+ TF  +S I
Sbjct: 67  SVRNVNNWSGAVWITPIAGAYIADSYIGRFWTFTASSLI 105

[Close]
BLAST of Lsi05G017560 vs. Swiss-Prot
Match: PTR1_ARATH (Protein NRT1/ PTR FAMILY 8.1 OS=Arabidopsis thaliana GN=NPF8.1 PE=1 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 4.6e-26
Identity = 53/94 (56.38%), Postives = 71/94 (75.53%), Query Frame = 1 

Query: 40  DDYTKDGTVDLKGNLILRSRRGRWKACSFIVVYEVFERMAYYGISTNLIIYLTKKLHQGT 99
           D YT+DGTVD+  N   + + G WKAC FI+  E  ER+AYYG+ TNL+ YL  +L+QG 
Sbjct: 5   DVYTQDGTVDIHKNPANKEKTGNWKACRFILGNECCERLAYYGMGTNLVNYLESRLNQGN 64

Query: 100 VTSANNVTNWSGTVWMMPILGAYVADAHLGRYRT 134
            T+ANNVTNWSGT ++ P++GA++ADA+LGRY T
Sbjct: 65  ATAANNVTNWSGTCYITPLIGAFIADAYLGRYWT 98

[Close]
BLAST of Lsi05G017560 vs. Swiss-Prot
Match: PTR2_ARATH (Protein NRT1/ PTR FAMILY 8.3 OS=Arabidopsis thaliana GN=NPF8.3 PE=1 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 1.8e-25
Identity = 55/101 (54.46%), Postives = 70/101 (69.31%), Query Frame = 1 

Query: 42  YTKDGTVDLKGNLILRSRRGRWKACSFIVVYEVFERMAYYGISTNLIIYLTKKLHQGTVT 101
           Y +DG+VD  GN  L+ + G WKAC FI+  E  ER+AYYGI+ NLI YLT KLHQG V+
Sbjct: 24  YAEDGSVDFNGNPPLKEKTGNWKACPFILGNECCERLAYYGIAGNLITYLTTKLHQGNVS 83

Query: 102 SANNVTNWSGTVWMMPILGAYVADAHLGRYRTFLVASAICF 143
           +A NVT W GT ++ P++GA +ADA+ GRY T    S I F
Sbjct: 84  AATNVTTWQGTCYLTPLIGAVLADAYWGRYWTIACFSGIYF 124

[Close]
BLAST of Lsi05G017560 vs. TrEMBL
Match: A0A0A0L706_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G134770 PE=4 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 3.9e-56
Identity = 109/115 (94.78%), Postives = 112/115 (97.39%), Query Frame = 1 

Query: 29  MVASAAEETGLDDYTKDGTVDLKGNLILRSRRGRWKACSFIVVYEVFERMAYYGISTNLI 88
           M ASAAEETGLDDYTKDGTVDLKGN +LRS+RGRWKACSFIVVYEVFERMAYYGISTNLI
Sbjct: 1   MAASAAEETGLDDYTKDGTVDLKGNPVLRSQRGRWKACSFIVVYEVFERMAYYGISTNLI 60

Query: 89  IYLTKKLHQGTVTSANNVTNWSGTVWMMPILGAYVADAHLGRYRTFLVASAICFT 144
           IYLTKKLHQGTVTSANNVTNWSGTVW+MPILGAYVADAHLGRYRTFLVASAIC T
Sbjct: 61  IYLTKKLHQGTVTSANNVTNWSGTVWIMPILGAYVADAHLGRYRTFLVASAICLT 115

[Close]
BLAST of Lsi05G017560 vs. TrEMBL
Match: A5BCA6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_015576 PE=4 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 2.6e-44
Identity = 85/105 (80.95%), Postives = 97/105 (92.38%), Query Frame = 1 

Query: 36  ETGLDDYTKDGTVDLKGNLILRSRRGRWKACSFIVVYEVFERMAYYGISTNLIIYLTKKL 95
           E G+DDYT+DGTVDLKGN + RS+RG W ACSF+VVYEVFERMAYYGISTNL+IYLTKKL
Sbjct: 4   ENGVDDYTQDGTVDLKGNPVRRSKRGGWTACSFVVVYEVFERMAYYGISTNLVIYLTKKL 63

Query: 96  HQGTVTSANNVTNWSGTVWMMPILGAYVADAHLGRYRTFLVASAI 141
           HQGTVTS+NNVTNW GTVWM P+LGAY+ADA+LGRY TF++ASAI
Sbjct: 64  HQGTVTSSNNVTNWVGTVWMTPVLGAYIADAYLGRYLTFVIASAI 108

[Close]
BLAST of Lsi05G017560 vs. TrEMBL
Match: D7SZL3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0049g01550 PE=4 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 2.6e-44
Identity = 85/105 (80.95%), Postives = 97/105 (92.38%), Query Frame = 1 

Query: 36  ETGLDDYTKDGTVDLKGNLILRSRRGRWKACSFIVVYEVFERMAYYGISTNLIIYLTKKL 95
           E G+DDYT+DGTVDLKGN + RS+RG W ACSF+VVYEVFERMAYYGISTNL+IYLTKKL
Sbjct: 4   ENGVDDYTQDGTVDLKGNPVRRSKRGGWTACSFVVVYEVFERMAYYGISTNLVIYLTKKL 63

Query: 96  HQGTVTSANNVTNWSGTVWMMPILGAYVADAHLGRYRTFLVASAI 141
           HQGTVTS+NNVTNW GTVWM P+LGAY+ADA+LGRY TF++ASAI
Sbjct: 64  HQGTVTSSNNVTNWVGTVWMTPVLGAYIADAYLGRYLTFVIASAI 108

[Close]
BLAST of Lsi05G017560 vs. TrEMBL
Match: J3N3B5_ORYBR (Uncharacterized protein OS=Oryza brachyantha PE=4 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 1.0e-43
Identity = 83/109 (76.15%), Postives = 98/109 (89.91%), Query Frame = 1 

Query: 32  SAAEETGLDDYTKDGTVDLKGNLILRSRRGRWKACSFIVVYEVFERMAYYGISTNLIIYL 91
           +AA   G DDYT+DGTVDL+GN +LRS+RG WKAC F+VVYEVFERMAYYGIS+NL++YL
Sbjct: 8   AAAAAAGDDDYTQDGTVDLRGNPVLRSKRGGWKACGFVVVYEVFERMAYYGISSNLVLYL 67

Query: 92  TKKLHQGTVTSANNVTNWSGTVWMMPILGAYVADAHLGRYRTFLVASAI 141
           T KLHQGTV+SANNVTNW GT+WM PI+GAY+ADAHLGRYRTF++AS I
Sbjct: 68  TTKLHQGTVSSANNVTNWVGTIWMTPIVGAYIADAHLGRYRTFMIASLI 116

[Close]
BLAST of Lsi05G017560 vs. TrEMBL
Match: M5XVS3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa003209mg PE=4 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 1.0e-43
Identity = 88/110 (80.00%), Postives = 99/110 (90.00%), Query Frame = 1 

Query: 33  AAEETG--LDDYTKDGTVDLKGNLILRSRRGRWKACSFIVVYEVFERMAYYGISTNLIIY 92
           AAEE G  +D YT+DGTVDLKGN +LRS+RG W ACSF+VVYEVFERMAYYGIS+NL++Y
Sbjct: 2   AAEEGGQRVDQYTQDGTVDLKGNPVLRSKRGGWTACSFVVVYEVFERMAYYGISSNLVLY 61

Query: 93  LTKKLHQGTVTSANNVTNWSGTVWMMPILGAYVADAHLGRYRTFLVASAI 141
           LTKKLHQGTVTSANNVTNW GT+W+ PILGAYVADAHLGRY TFL+AS I
Sbjct: 62  LTKKLHQGTVTSANNVTNWVGTIWITPILGAYVADAHLGRYWTFLIASII 111

[Close]
BLAST of Lsi05G017560 vs. TAIR10
Match: AT5G46040.1 (AT5G46040.1 Major facilitator superfamily protein)

HSP 1 Score: 176.0 bits (445), Expect = 1.8e-44
Identity = 82/106 (77.36%), Postives = 94/106 (88.68%), Query Frame = 1 

Query: 35  EETGLDDYTKDGTVDLKGNLILRSRRGRWKACSFIVVYEVFERMAYYGISTNLIIYLTKK 94
           EE G DDYTKDGTVDL+GN + RS+ GRWKACSF+VVYEVFERMAYYGIS+NL+IY+T K
Sbjct: 4   EEVG-DDYTKDGTVDLRGNRVRRSQTGRWKACSFVVVYEVFERMAYYGISSNLVIYMTTK 63

Query: 95  LHQGTVTSANNVTNWSGTVWMMPILGAYVADAHLGRYRTFLVASAI 141
           LHQGTV S+NNVTNW GT W+ PILGAYVADAH GRY TF+++SAI
Sbjct: 64  LHQGTVKSSNNVTNWVGTSWLTPILGAYVADAHFGRYITFVISSAI 108

[Close]
BLAST of Lsi05G017560 vs. TAIR10
Match: AT5G46050.1 (AT5G46050.1 peptide transporter 3)

HSP 1 Score: 170.2 bits (430), Expect = 9.8e-43
Identity = 82/109 (75.23%), Postives = 93/109 (85.32%), Query Frame = 1 

Query: 35  EETGLDDYTKDGTVDLKGNLILRSRRGRWKACSFIVVYEVFERMAYYGISTNLIIYLTKK 94
           EE G DDYTKDGTVDL+GN + RS RGRWKACSF+VVYEVFERMAYYGIS+NL IY+T K
Sbjct: 4   EEVG-DDYTKDGTVDLQGNPVRRSIRGRWKACSFVVVYEVFERMAYYGISSNLFIYMTTK 63

Query: 95  LHQGTVTSANNVTNWSGTVWMMPILGAYVADAHLGRYRTFLVASAICFT 144
           LHQGTV S+NNVTNW GT W+ PILGAYV DA LGRY TF+++ AI F+
Sbjct: 64  LHQGTVKSSNNVTNWVGTSWLTPILGAYVGDALLGRYITFVISCAIYFS 111

[Close]
BLAST of Lsi05G017560 vs. TAIR10
Match: AT2G40460.1 (AT2G40460.1 Major facilitator superfamily protein)

HSP 1 Score: 139.0 bits (349), Expect = 2.4e-33
Identity = 59/99 (59.60%), Postives = 81/99 (81.82%), Query Frame = 1 

Query: 42  YTKDGTVDLKGNLILRSRRGRWKACSFIVVYEVFERMAYYGISTNLIIYLTKKLHQGTVT 101
           YT+DGTVDL+G  +L S+ GRW+ACSF++ YE FERMA+YGI++NL+ YLTK+LH+ T++
Sbjct: 7   YTQDGTVDLQGRPVLASKTGRWRACSFLLGYEAFERMAFYGIASNLVNYLTKRLHEDTIS 66

Query: 102 SANNVTNWSGTVWMMPILGAYVADAHLGRYRTFLVASAI 141
           S  NV NWSG VW+ PI GAY+AD+++GR+ TF  +S I
Sbjct: 67  SVRNVNNWSGAVWITPIAGAYIADSYIGRFWTFTASSLI 105

[Close]
BLAST of Lsi05G017560 vs. TAIR10
Match: AT3G54140.1 (AT3G54140.1 peptide transporter 1)

HSP 1 Score: 119.0 bits (297), Expect = 2.6e-27
Identity = 53/94 (56.38%), Postives = 71/94 (75.53%), Query Frame = 1 

Query: 40  DDYTKDGTVDLKGNLILRSRRGRWKACSFIVVYEVFERMAYYGISTNLIIYLTKKLHQGT 99
           D YT+DGTVD+  N   + + G WKAC FI+  E  ER+AYYG+ TNL+ YL  +L+QG 
Sbjct: 5   DVYTQDGTVDIHKNPANKEKTGNWKACRFILGNECCERLAYYGMGTNLVNYLESRLNQGN 64

Query: 100 VTSANNVTNWSGTVWMMPILGAYVADAHLGRYRT 134
            T+ANNVTNWSGT ++ P++GA++ADA+LGRY T
Sbjct: 65  ATAANNVTNWSGTCYITPLIGAFIADAYLGRYWT 98

[Close]
BLAST of Lsi05G017560 vs. TAIR10
Match: AT2G02040.1 (AT2G02040.1 peptide transporter 2)

HSP 1 Score: 117.1 bits (292), Expect = 9.9e-27
Identity = 55/101 (54.46%), Postives = 70/101 (69.31%), Query Frame = 1 

Query: 42  YTKDGTVDLKGNLILRSRRGRWKACSFIVVYEVFERMAYYGISTNLIIYLTKKLHQGTVT 101
           Y +DG+VD  GN  L+ + G WKAC FI+  E  ER+AYYGI+ NLI YLT KLHQG V+
Sbjct: 24  YAEDGSVDFNGNPPLKEKTGNWKACPFILGNECCERLAYYGIAGNLITYLTTKLHQGNVS 83

Query: 102 SANNVTNWSGTVWMMPILGAYVADAHLGRYRTFLVASAICF 143
           +A NVT W GT ++ P++GA +ADA+ GRY T    S I F
Sbjct: 84  AATNVTTWQGTCYLTPLIGAVLADAYWGRYWTIACFSGIYF 124

[Close]
BLAST of Lsi05G017560 vs. NCBI nr
Match: gi|449433235|ref|XP_004134403.1| (PREDICTED: protein NRT1/ PTR FAMILY 5.2-like [Cucumis sativus])

HSP 1 Score: 225.7 bits (574), Expect = 5.6e-56
Identity = 109/115 (94.78%), Postives = 112/115 (97.39%), Query Frame = 1 

Query: 29  MVASAAEETGLDDYTKDGTVDLKGNLILRSRRGRWKACSFIVVYEVFERMAYYGISTNLI 88
           M ASAAEETGLDDYTKDGTVDLKGN +LRS+RGRWKACSFIVVYEVFERMAYYGISTNLI
Sbjct: 1   MAASAAEETGLDDYTKDGTVDLKGNPVLRSQRGRWKACSFIVVYEVFERMAYYGISTNLI 60

Query: 89  IYLTKKLHQGTVTSANNVTNWSGTVWMMPILGAYVADAHLGRYRTFLVASAICFT 144
           IYLTKKLHQGTVTSANNVTNWSGTVW+MPILGAYVADAHLGRYRTFLVASAIC T
Sbjct: 61  IYLTKKLHQGTVTSANNVTNWSGTVWIMPILGAYVADAHLGRYRTFLVASAICLT 115

[Close]
BLAST of Lsi05G017560 vs. NCBI nr
Match: gi|659076057|ref|XP_008438477.1| (PREDICTED: protein NRT1/ PTR FAMILY 5.2-like [Cucumis melo])

HSP 1 Score: 220.3 bits (560), Expect = 2.4e-54
Identity = 106/113 (93.81%), Postives = 110/113 (97.35%), Query Frame = 1 

Query: 31  ASAAEETGLDDYTKDGTVDLKGNLILRSRRGRWKACSFIVVYEVFERMAYYGISTNLIIY 90
           ASAAEETGLD YTKDGTVDLKGN +LRS+RGRWKACSFIVVYEVFERMAYYGISTNLIIY
Sbjct: 4   ASAAEETGLDGYTKDGTVDLKGNPVLRSQRGRWKACSFIVVYEVFERMAYYGISTNLIIY 63

Query: 91  LTKKLHQGTVTSANNVTNWSGTVWMMPILGAYVADAHLGRYRTFLVASAICFT 144
           LTKKLHQGTVTSANNVTNWSGTVW+MPILGAYVADAHLGRYRTFL+ASAIC T
Sbjct: 64  LTKKLHQGTVTSANNVTNWSGTVWIMPILGAYVADAHLGRYRTFLIASAICLT 116

[Close]
BLAST of Lsi05G017560 vs. NCBI nr
Match: gi|147806162|emb|CAN63331.1| (hypothetical protein VITISV_015576 [Vitis vinifera])

HSP 1 Score: 186.4 bits (472), Expect = 3.8e-44
Identity = 85/105 (80.95%), Postives = 97/105 (92.38%), Query Frame = 1 

Query: 36  ETGLDDYTKDGTVDLKGNLILRSRRGRWKACSFIVVYEVFERMAYYGISTNLIIYLTKKL 95
           E G+DDYT+DGTVDLKGN + RS+RG W ACSF+VVYEVFERMAYYGISTNL+IYLTKKL
Sbjct: 4   ENGVDDYTQDGTVDLKGNPVRRSKRGGWTACSFVVVYEVFERMAYYGISTNLVIYLTKKL 63

Query: 96  HQGTVTSANNVTNWSGTVWMMPILGAYVADAHLGRYRTFLVASAI 141
           HQGTVTS+NNVTNW GTVWM P+LGAY+ADA+LGRY TF++ASAI
Sbjct: 64  HQGTVTSSNNVTNWVGTVWMTPVLGAYIADAYLGRYLTFVIASAI 108

[Close]
BLAST of Lsi05G017560 vs. NCBI nr
Match: gi|225433219|ref|XP_002285402.1| (PREDICTED: protein NRT1/ PTR FAMILY 5.2 [Vitis vinifera])

HSP 1 Score: 186.4 bits (472), Expect = 3.8e-44
Identity = 85/105 (80.95%), Postives = 97/105 (92.38%), Query Frame = 1 

Query: 36  ETGLDDYTKDGTVDLKGNLILRSRRGRWKACSFIVVYEVFERMAYYGISTNLIIYLTKKL 95
           E G+DDYT+DGTVDLKGN + RS+RG W ACSF+VVYEVFERMAYYGISTNL+IYLTKKL
Sbjct: 4   ENGVDDYTQDGTVDLKGNPVRRSKRGGWTACSFVVVYEVFERMAYYGISTNLVIYLTKKL 63

Query: 96  HQGTVTSANNVTNWSGTVWMMPILGAYVADAHLGRYRTFLVASAI 141
           HQGTVTS+NNVTNW GTVWM P+LGAY+ADA+LGRY TF++ASAI
Sbjct: 64  HQGTVTSSNNVTNWVGTVWMTPVLGAYIADAYLGRYLTFVIASAI 108

[Close]
BLAST of Lsi05G017560 vs. NCBI nr
Match: gi|694411722|ref|XP_009334213.1| (PREDICTED: LOW QUALITY PROTEIN: protein NRT1/ PTR FAMILY 5.2-like [Pyrus x bretschneideri])

HSP 1 Score: 185.7 bits (470), Expect = 6.4e-44
Identity = 87/112 (77.68%), Postives = 98/112 (87.50%), Query Frame = 1 

Query: 29  MVASAAEETGLDDYTKDGTVDLKGNLILRSRRGRWKACSFIVVYEVFERMAYYGISTNLI 88
           M    A +  +D+YT+DGTVDLKGN +LRS+RG W ACSF+VVYEVFERMAYYGIS+NLI
Sbjct: 1   MEGEEAGQRRVDEYTQDGTVDLKGNPVLRSKRGGWNACSFVVVYEVFERMAYYGISSNLI 60

Query: 89  IYLTKKLHQGTVTSANNVTNWSGTVWMMPILGAYVADAHLGRYRTFLVASAI 141
           +YLTKKLHQGTVTSANNVTNW GT+WM PILGAYVADAHLGRY TFL+AS I
Sbjct: 61  LYLTKKLHQGTVTSANNVTNWVGTIWMTPILGAYVADAHLGRYWTFLIASLI 112

The following BLAST results are available for this feature:
BLAST of Lsi05G017560 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PTR4_ARATH3.2e-4377.36Protein NRT1/ PTR FAMILY 5.3 OS=Arabidopsis thaliana GN=NPF5.3 PE=2 SV=1[more]
PTR3_ARATH1.7e-4175.23Protein NRT1/ PTR FAMILY 5.2 OS=Arabidopsis thaliana GN=NPF5.2 PE=2 SV=1[more]
PTR30_ARATH4.3e-3259.60Protein NRT1/ PTR FAMILY 5.1 OS=Arabidopsis thaliana GN=NPF5.1 PE=2 SV=2[more]
PTR1_ARATH4.6e-2656.38Protein NRT1/ PTR FAMILY 8.1 OS=Arabidopsis thaliana GN=NPF8.1 PE=1 SV=1[more]
PTR2_ARATH1.8e-2554.46Protein NRT1/ PTR FAMILY 8.3 OS=Arabidopsis thaliana GN=NPF8.3 PE=1 SV=1[more]
BLAST of Lsi05G017560 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L706_CUCSA3.9e-5694.78Uncharacterized protein OS=Cucumis sativus GN=Csa_3G134770 PE=4 SV=1[more]
A5BCA6_VITVI2.6e-4480.95Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_015576 PE=4 SV=1[more]
D7SZL3_VITVI2.6e-4480.95Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0049g01550 PE=4 SV=... [more]
J3N3B5_ORYBR1.0e-4376.15Uncharacterized protein OS=Oryza brachyantha PE=4 SV=1[more]
M5XVS3_PRUPE1.0e-4380.00Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa003209mg PE=4 SV=1[more]
BLAST of Lsi05G017560 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G46040.11.8e-4477.36 Major facilitator superfamily protein[more]
AT5G46050.19.8e-4375.23 peptide transporter 3[more]
AT2G40460.12.4e-3359.60 Major facilitator superfamily protein[more]
AT3G54140.12.6e-2756.38 peptide transporter 1[more]
AT2G02040.19.9e-2754.46 peptide transporter 2[more]
BLAST of Lsi05G017560 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449433235|ref|XP_004134403.1|5.6e-5694.78PREDICTED: protein NRT1/ PTR FAMILY 5.2-like [Cucumis sativus][more]
gi|659076057|ref|XP_008438477.1|2.4e-5493.81PREDICTED: protein NRT1/ PTR FAMILY 5.2-like [Cucumis melo][more]
gi|147806162|emb|CAN63331.1|3.8e-4480.95hypothetical protein VITISV_015576 [Vitis vinifera][more]
gi|225433219|ref|XP_002285402.1|3.8e-4480.95PREDICTED: protein NRT1/ PTR FAMILY 5.2 [Vitis vinifera][more]
gi|694411722|ref|XP_009334213.1|6.4e-4477.68PREDICTED: LOW QUALITY PROTEIN: protein NRT1/ PTR FAMILY 5.2-like [Pyrus x brets... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0006810transport
Vocabulary: Molecular Function
TermDefinition
GO:0005215transporter activity
Vocabulary: INTERPRO
TermDefinition
IPR020846MFS_dom
IPR000109POT_fam
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006857 oligopeptide transport
biological_process GO:0006810 transport
biological_process GO:0055085 transmembrane transport
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0016020 membrane
molecular_function GO:0005215 transporter activity
molecular_function GO:0022857 transmembrane transporter activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi05G017560.1Lsi05G017560.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000109Proton-dependent oligopeptide transporter familyPANTHERPTHR11654OLIGOPEPTIDE TRANSPORTER-RELATEDcoord: 4..140
score: 1.3
IPR020846Major facilitator superfamily domainunknownSSF103473MFS general substrate transportercoord: 62..142
score: 7.4
NoneNo IPR availablePANTHERPTHR11654:SF73PROTEIN NRT1/ PTR FAMILY 5.2-RELATEDcoord: 4..140
score: 1.3

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Lsi05G017560MELO3C006391Melon (DHL92) v3.5.1lsimeB378
Lsi05G017560MELO3C006392.2Melon (DHL92) v3.6.1lsimedB396
Lsi05G017560Cp4.1LG17g02130Cucurbita pepo (Zucchini)cpelsiB267
Lsi05G017560CsGy2G010230Cucumber (Gy14) v2cgyblsiB115
Lsi05G017560CsaV3_3G028210Cucumber (Chinese Long) v3cuclsiB220
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi05G017560Bottle gourd (USVL1VR-Ls)lsilsiB011
Lsi05G017560Bottle gourd (USVL1VR-Ls)lsilsiB156
Lsi05G017560Cucumber (Gy14) v1cgylsiB415
Lsi05G017560Cucumber (Gy14) v1cgylsiB620
Lsi05G017560Cucurbita maxima (Rimu)cmalsiB245
Lsi05G017560Cucurbita maxima (Rimu)cmalsiB356
Lsi05G017560Cucurbita maxima (Rimu)cmalsiB487
Lsi05G017560Cucurbita maxima (Rimu)cmalsiB586
Lsi05G017560Cucurbita maxima (Rimu)cmalsiB764
Lsi05G017560Cucurbita maxima (Rimu)cmalsiB839
Lsi05G017560Cucurbita moschata (Rifu)cmolsiB233
Lsi05G017560Cucurbita moschata (Rifu)cmolsiB345
Lsi05G017560Cucurbita moschata (Rifu)cmolsiB471
Lsi05G017560Cucurbita moschata (Rifu)cmolsiB566
Lsi05G017560Cucurbita moschata (Rifu)cmolsiB757
Lsi05G017560Cucurbita moschata (Rifu)cmolsiB823
Lsi05G017560Cucurbita pepo (Zucchini)cpelsiB120
Lsi05G017560Cucurbita pepo (Zucchini)cpelsiB506
Lsi05G017560Cucurbita pepo (Zucchini)cpelsiB617
Lsi05G017560Cucurbita pepo (Zucchini)cpelsiB714
Lsi05G017560Wild cucumber (PI 183967)cpilsiB125
Lsi05G017560Wild cucumber (PI 183967)cpilsiB201
Lsi05G017560Wild cucumber (PI 183967)cpilsiB207
Lsi05G017560Cucumber (Chinese Long) v2culsiB127
Lsi05G017560Cucumber (Chinese Long) v2culsiB209
Lsi05G017560Melon (DHL92) v3.5.1lsimeB358
Lsi05G017560Melon (DHL92) v3.5.1lsimeB360
Lsi05G017560Watermelon (Charleston Gray)lsiwcgB335
Lsi05G017560Watermelon (Charleston Gray)lsiwcgB343
Lsi05G017560Watermelon (Charleston Gray)lsiwcgB349
Lsi05G017560Watermelon (97103) v1lsiwmB359
Lsi05G017560Watermelon (97103) v1lsiwmB365
Lsi05G017560Watermelon (97103) v1lsiwmB382
Lsi05G017560Cucumber (Gy14) v2cgyblsiB195
Lsi05G017560Cucumber (Gy14) v2cgyblsiB196
Lsi05G017560Melon (DHL92) v3.6.1lsimedB361
Lsi05G017560Melon (DHL92) v3.6.1lsimedB373
Lsi05G017560Melon (DHL92) v3.6.1lsimedB375
Lsi05G017560Silver-seed gourdcarlsiB206
Lsi05G017560Silver-seed gourdcarlsiB210
Lsi05G017560Silver-seed gourdcarlsiB690
Lsi05G017560Silver-seed gourdcarlsiB718
Lsi05G017560Silver-seed gourdcarlsiB878
Lsi05G017560Silver-seed gourdcarlsiB983
Lsi05G017560Cucumber (Chinese Long) v3cuclsiB139
Lsi05G017560Cucumber (Chinese Long) v3cuclsiB228
Lsi05G017560Cucumber (Chinese Long) v3cuclsiB495
Lsi05G017560Watermelon (97103) v2lsiwmbB333
Lsi05G017560Watermelon (97103) v2lsiwmbB341
Lsi05G017560Watermelon (97103) v2lsiwmbB347
Lsi05G017560Wax gourdlsiwgoB421
Lsi05G017560Wax gourdlsiwgoB449
Lsi05G017560Wax gourdlsiwgoB462