Lsi05G017010 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCGGATTACTTTGCGGCGTTGATGAGGTCAAAGATCGGTTCAGCTTCGGTCCAGCGAGACATGCTGCTGGTGGGGATGAAGGTCAATAGTGAAACAGCGGTGAAGTTGGGAATTGCTGACGCGGTGCATGACGGTGAGGAGGCGTTGATGGAGGCAGCGGTGACGATGGGGGAGAAGTTAGCTAAGAGGAAGTGGGAAGGAGAAGCTTACGCACAGATTAGAAAGAGTCTGTATCCTAAAATGTCTCCGTTACTTAATGAATTGAATGGAAAGATGTAAACATGGCGTAAAGCTAAAGGAATTGTATTTGTATTCGACGTGTCATTTTGGTGGATTTGTTTGTCGTGTGCGAGTATTTTGGTTGATCCTGTTGCAAAGTATAATCAATAATTTTGGACTCTGTTTTCATCAATTGGCTTAGCTGGACAAATTTGGATATTGAAATTTTAGTACTATAATATGTTTAAAATTGGGTTTTTTGTTTGTTTTGTTTTGATTTTCGTGATGACCTCAATTGATCTTTAAAAAAATATCACACTAATTATTAAGATTCTCCGATCTTGTTTGGAAGATTCAATTGATTGAAAACGGAAAATTATCATAGTTTATATAAAAGAATATAATTTTATCACTACATTGTCTACTTAATTAGTAGAATCTTTCAAACCCCATACAAAAAAACATATCCAAAATTATATGGTTCTAAGTAGTGAATTACTAGCATAAGAATTATGCAAAATATACAATCCTACATAATATAGATGAAAGGGGGGAGGGGGGTTGATTAGAAATAATGTGTGCACCAATTAAAAGTAGATATATCTACTTTTATTTGTTAGTTTCCCTTGTTAATTAAAATATAAAAAAAAAAATTGAAAAATGAGATTGTTACTTGACCAATAAATTATAGTTTTTTTTTTTAGATGTATAGGGTTTTGGAGTACCTCTCGTGATGAATAAAATATTTGTTAGGACTTTTTGTCTCACAATTGGATTCTGGAGCATAGAAACGTGAGTAACGACAATTCACCTTGTATGTCATCAAGAATCAAATAATTGTTGGATTATTGATAATGAATATGGATGTCCACAATAAAAAATAGACAACTCATTTCATTGGAAAAAAATTAGGTGCAGCTTGACTACACTTATCGCCATTCAATTAGAATGTGCCACATTGCACTTTTATTTTTTTTAAAATTATATATTTTTGTATTTTTTTTTTTATTTGTGTGGTACAGGGGAGGGGAGCATTGTGCTAGGATGCACCTAATCATTGCTCCATTTCATTATCCACAATTTAAAATTATAATTATTTGGCAAATTTGATAAATGGTGGTGATTCGTTGGAGAGGATCGAGGGATAATTGGTGAAACCTTCGTTCTGAAAATGTGCAGCGTTGAGAAGCGTGGGAAGTTGTTCATACTAACTCTAACCGGCAACCACGAGCACTGGCTGAACCCATCCTTAATAAACTCCATCCTCAAAGCTCTGTCCCAATTGAAGGCCGAAGCCAGAGACTCCCCTGGCTCTGTTCTCATCACAACTTCCCAAGGCAAATTCTTCTCCAACGGCCTCGATCTTCCCTGGATTCTCTCCGCTTCCTCCCTATTCGTCGCCCGAAACCGCCTCAACCACATGATCCAGCTTTTCAAGTCCCTCTTGGCTCAGCTCCTCTGTTTCCCCCTACCCACCGTAGCCGCCCTCCCAGGCCATGCTGCTGCCGCTGGCCTCCTCTTGGCGCTTTCCCACGACTATATGCTCATGAGGAGCGACCGAGGCGTGTTGTACATGAGCGAGCTGGACTTGGGTGCCAGTCTCCCGGACTACTTCATGGCTCTAGCCAAGTCCAAGATCGGGTCGAGTTCGGTAAGGCGGGATGTGTTCTTGAGGGGGATGAAAGTAAGAGGTGAGGCCGCAGTGAGGATGGGGGTAGCGGAATCTACACACCACGGGGAGGACGGCGTCATGGAGGCGGCGGTGCGACTTGGGGAGGAGCTGGTGGAGAGGAATTGGGATGGAGATGCCTACGCCGAGATTAGGAAGAGCTTGTATCCTGAAATCTCTGGGTTGCTTGGATTTACCCCGAAGGTCATAACAATTTCTAAGCTTTGA ATGCCGGATTACTTTGCGGCGTTGATGAGGTCAAAGATCGGTTCAGCTTCGGTCCAGCGAGACATGCTGCTGGTGGGGATGAAGGTCAATAGTGAAACAGCGGTGAAGTTGGGAATTGCTGACGCGGTGCATGACGGTGAGGAGGCGTTGATGGAGGCAGCGGTGACGATGGGGGAGAAGTTAGCTAAGAGGAAGTGGGAAGGAGAAGCTTACGCACAGATTAGAAAGAGTCTGTATCCTAAAATGTCTCCGTTACTTAATGAATTGAATGGAAAGATCGTTGAGAAGCGTGGGAAGTTGTTCATACTAACTCTAACCGGCAACCACGAGCACTGGCTGAACCCATCCTTAATAAACTCCATCCTCAAAGCTCTGTCCCAATTGAAGGCCGAAGCCAGAGACTCCCCTGGCTCTGTTCTCATCACAACTTCCCAAGGCAAATTCTTCTCCAACGGCCTCGATCTTCCCTGGATTCTCTCCGCTTCCTCCCTATTCGTCGCCCGAAACCGCCTCAACCACATGATCCAGCTTTTCAAGTCCCTCTTGGCTCAGCTCCTCTGTTTCCCCCTACCCACCGTAGCCGCCCTCCCAGGCCATGCTGCTGCCGCTGGCCTCCTCTTGGCGCTTTCCCACGACTATATGCTCATGAGGAGCGACCGAGGCGTGTTGTACATGAGCGAGCTGGACTTGGGTGCCAGTCTCCCGGACTACTTCATGGCTCTAGCCAAGTCCAAGATCGGGTCGAGTTCGGTAAGGCGGGATGTGTTCTTGAGGGGGATGAAAGTAAGAGGTGAGGCCGCAGTGAGGATGGGGGTAGCGGAATCTACACACCACGGGGAGGACGGCGTCATGGAGGCGGCGGTGCGACTTGGGGAGGAGCTGGTGGAGAGGAATTGGGATGGAGATGCCTACGCCGAGATTAGGAAGAGCTTGTATCCTGAAATCTCTGGGTTGCTTGGATTTACCCCGAAGGTCATAACAATTTCTAAGCTTTGA ATGCCGGATTACTTTGCGGCGTTGATGAGGTCAAAGATCGGTTCAGCTTCGGTCCAGCGAGACATGCTGCTGGTGGGGATGAAGGTCAATAGTGAAACAGCGGTGAAGTTGGGAATTGCTGACGCGGTGCATGACGGTGAGGAGGCGTTGATGGAGGCAGCGGTGACGATGGGGGAGAAGTTAGCTAAGAGGAAGTGGGAAGGAGAAGCTTACGCACAGATTAGAAAGAGTCTGTATCCTAAAATGTCTCCGTTACTTAATGAATTGAATGGAAAGATCGTTGAGAAGCGTGGGAAGTTGTTCATACTAACTCTAACCGGCAACCACGAGCACTGGCTGAACCCATCCTTAATAAACTCCATCCTCAAAGCTCTGTCCCAATTGAAGGCCGAAGCCAGAGACTCCCCTGGCTCTGTTCTCATCACAACTTCCCAAGGCAAATTCTTCTCCAACGGCCTCGATCTTCCCTGGATTCTCTCCGCTTCCTCCCTATTCGTCGCCCGAAACCGCCTCAACCACATGATCCAGCTTTTCAAGTCCCTCTTGGCTCAGCTCCTCTGTTTCCCCCTACCCACCGTAGCCGCCCTCCCAGGCCATGCTGCTGCCGCTGGCCTCCTCTTGGCGCTTTCCCACGACTATATGCTCATGAGGAGCGACCGAGGCGTGTTGTACATGAGCGAGCTGGACTTGGGTGCCAGTCTCCCGGACTACTTCATGGCTCTAGCCAAGTCCAAGATCGGGTCGAGTTCGGTAAGGCGGGATGTGTTCTTGAGGGGGATGAAAGTAAGAGGTGAGGCCGCAGTGAGGATGGGGGTAGCGGAATCTACACACCACGGGGAGGACGGCGTCATGGAGGCGGCGGTGCGACTTGGGGAGGAGCTGGTGGAGAGGAATTGGGATGGAGATGCCTACGCCGAGATTAGGAAGAGCTTGTATCCTGAAATCTCTGGGTTGCTTGGATTTACCCCGAAGGTCATAACAATTTCTAAGCTTTGA MPDYFAALMRSKIGSASVQRDMLLVGMKVNSETAVKLGIADAVHDGEEALMEAAVTMGEKLAKRKWEGEAYAQIRKSLYPKMSPLLNELNGKIVEKRGKLFILTLTGNHEHWLNPSLINSILKALSQLKAEARDSPGSVLITTSQGKFFSNGLDLPWILSASSLFVARNRLNHMIQLFKSLLAQLLCFPLPTVAALPGHAAAAGLLLALSHDYMLMRSDRGVLYMSELDLGASLPDYFMALAKSKIGSSSVRRDVFLRGMKVRGEAAVRMGVAESTHHGEDGVMEAAVRLGEELVERNWDGDAYAEIRKSLYPEISGLLGFTPKVITISKL
BLAST of Lsi05G017010 vs. Swiss-Prot
Match: ECI2_ARATH (Enoyl-CoA delta isomerase 2, peroxisomal OS=Arabidopsis thaliana GN=ECI2 PE=1 SV=1) HSP 1 Score: 262.3 bits (669), Expect = 7.1e-69 Identity = 133/239 (55.65%), Postives = 177/239 (74.06%), Query Frame = 1
BLAST of Lsi05G017010 vs. Swiss-Prot
Match: ECI3_ARATH (Enoyl-CoA delta isomerase 3 OS=Arabidopsis thaliana GN=ECI3 PE=1 SV=1) HSP 1 Score: 237.3 bits (604), Expect = 2.5e-61 Identity = 123/230 (53.48%), Postives = 161/230 (70.00%), Query Frame = 1
BLAST of Lsi05G017010 vs. Swiss-Prot
Match: ECI1_ARATH (Enoyl-CoA delta isomerase 1, peroxisomal OS=Arabidopsis thaliana GN=ECI1 PE=1 SV=1) HSP 1 Score: 201.1 bits (510), Expect = 1.9e-50 Identity = 109/222 (49.10%), Postives = 152/222 (68.47%), Query Frame = 1
BLAST of Lsi05G017010 vs. Swiss-Prot
Match: FADJ_YERE8 (Fatty acid oxidation complex subunit alpha OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain NCTC 13174 / 8081) GN=fadJ PE=3 SV=2) HSP 1 Score: 53.1 bits (126), Expect = 6.6e-06 Identity = 50/176 (28.41%), Postives = 85/176 (48.30%), Query Frame = 1
BLAST of Lsi05G017010 vs. Swiss-Prot
Match: FADJ_YERP3 (Fatty acid oxidation complex subunit alpha OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=fadJ PE=3 SV=1) HSP 1 Score: 53.1 bits (126), Expect = 6.6e-06 Identity = 48/160 (30.00%), Postives = 76/160 (47.50%), Query Frame = 1
BLAST of Lsi05G017010 vs. TrEMBL
Match: A0A0A0L9X4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G141770 PE=4 SV=1) HSP 1 Score: 336.3 bits (861), Expect = 4.3e-89 Identity = 171/238 (71.85%), Postives = 200/238 (84.03%), Query Frame = 1
BLAST of Lsi05G017010 vs. TrEMBL
Match: A0A0A0L8C7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G141780 PE=4 SV=1) HSP 1 Score: 320.5 bits (820), Expect = 2.5e-84 Identity = 165/238 (69.33%), Postives = 199/238 (83.61%), Query Frame = 1
BLAST of Lsi05G017010 vs. TrEMBL
Match: V4MKX3_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10027007mg PE=4 SV=1) HSP 1 Score: 275.8 bits (704), Expect = 6.9e-71 Identity = 140/255 (54.90%), Postives = 184/255 (72.16%), Query Frame = 1
BLAST of Lsi05G017010 vs. TrEMBL
Match: A0A059AUF5_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H00183 PE=4 SV=1) HSP 1 Score: 273.1 bits (697), Expect = 4.5e-70 Identity = 139/238 (58.40%), Postives = 177/238 (74.37%), Query Frame = 1
BLAST of Lsi05G017010 vs. TrEMBL
Match: A0A0A0L4G9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G141810 PE=4 SV=1) HSP 1 Score: 271.9 bits (694), Expect = 1.0e-69 Identity = 131/226 (57.96%), Postives = 175/226 (77.43%), Query Frame = 1
BLAST of Lsi05G017010 vs. TAIR10
Match: AT4G14430.1 (AT4G14430.1 indole-3-butyric acid response 10) HSP 1 Score: 262.3 bits (669), Expect = 4.0e-70 Identity = 133/239 (55.65%), Postives = 177/239 (74.06%), Query Frame = 1
BLAST of Lsi05G017010 vs. TAIR10
Match: AT4G14440.1 (AT4G14440.1 3-hydroxyacyl-CoA dehydratase 1) HSP 1 Score: 237.3 bits (604), Expect = 1.4e-62 Identity = 123/230 (53.48%), Postives = 161/230 (70.00%), Query Frame = 1
BLAST of Lsi05G017010 vs. TAIR10
Match: AT1G65520.1 (AT1G65520.1 delta(3), delta(2)-enoyl CoA isomerase 1) HSP 1 Score: 201.1 bits (510), Expect = 1.1e-51 Identity = 109/222 (49.10%), Postives = 152/222 (68.47%), Query Frame = 1
BLAST of Lsi05G017010 vs. NCBI nr
Match: gi|659076206|ref|XP_008438557.1| (PREDICTED: uncharacterized protein LOC103483622 [Cucumis melo]) HSP 1 Score: 414.8 bits (1065), Expect = 1.4e-112 Identity = 211/238 (88.66%), Postives = 224/238 (94.12%), Query Frame = 1
BLAST of Lsi05G017010 vs. NCBI nr
Match: gi|449432588|ref|XP_004134081.1| (PREDICTED: 3-hydroxybutyryl-CoA dehydratase-like protein, mitochondrial [Cucumis sativus]) HSP 1 Score: 412.1 bits (1058), Expect = 8.9e-112 Identity = 208/238 (87.39%), Postives = 221/238 (92.86%), Query Frame = 1
BLAST of Lsi05G017010 vs. NCBI nr
Match: gi|449432584|ref|XP_004134079.1| (PREDICTED: 3-hydroxybutyryl-CoA dehydratase-like protein, mitochondrial [Cucumis sativus]) HSP 1 Score: 336.3 bits (861), Expect = 6.2e-89 Identity = 171/238 (71.85%), Postives = 200/238 (84.03%), Query Frame = 1
BLAST of Lsi05G017010 vs. NCBI nr
Match: gi|659076193|ref|XP_008438552.1| (PREDICTED: enoyl-CoA hydratase domain-containing protein 2, mitochondrial-like [Cucumis melo]) HSP 1 Score: 335.1 bits (858), Expect = 1.4e-88 Identity = 171/238 (71.85%), Postives = 200/238 (84.03%), Query Frame = 1
BLAST of Lsi05G017010 vs. NCBI nr
Match: gi|659076208|ref|XP_008438558.1| (PREDICTED: enoyl-CoA hydratase domain-containing protein 2, mitochondrial-like [Cucumis melo]) HSP 1 Score: 324.3 bits (830), Expect = 2.4e-85 Identity = 166/238 (69.75%), Postives = 200/238 (84.03%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |