Cp4.1LG08g03570 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGTGCACACTTGAGAGGCGTGGTGATCTCTTCATCGTCACCCTCACCGGCGACGACGAGCACTGGATCGGACCACCCTTGATTTCCTCCTTCCTCTCTCTTCTCACCCAAATCAACTCCCAAGCCACTCCCGGTTCCGTTCTGATCACCACCTCCCATGGCCGCTTCTTCTCCAATGGCTTCCACCTTCCCTGGGCTCAATCCGCTGCCTCCAAATCCGCCGCTAAAGACCGCATACTCCACATGGTTCATATCTTCAAGCCTGTCGTCGCCGCCCTTCTCTCTCTCCCCATGCCCACCATCGCCGCTGTCTCCGGCCATGCCGCCGCCGCCGGTTTTGCTCTCGCTCTTAGCCATGATTACGTCCTGATGAGGCGCGATAGAGGCGTGCTCTACATGAGCGAGGTCAGTTAACCAAATCATAATTCATAAACTTTCTTATACAAATAAACGTAATATTTATTTTAATCCAAATATGTTGAAAAAATTCTTCAATTAAACTAAATGCAAAATAAGATTTAAAGGTAATATGACCATAAGTTACAATAATTTGAAATATTAAATAATAACAAAGTAAATTATCATTCATAAACACATTTATATAAATCAAAACAATTAAAAATTGAGAATAAAATATCTAATTATTAGACACAAATTTAAAAATGGGAGGACTAAAACTCGTAATTTATTATTCATGACAGATTGACTTGGGTTTTACGTTGCCCGATTACTTTGCGGCATTGATGAGGTCGAAGATCGGGTCAGCCTCGGTTCGTCGAGACGTGCTGCTGGCAGGGATGAAGGTGAATGGTGAAACAGCAGTGAAGTTGGGAATCACAGATGCAGCACACGACGGCGGGGAGGCACTGATGGAGGCGGCGGTGGCGATGGGGGAGAAGTTGGCAAAGAGGAAGTGGGAAGGAGAAGCTTACGCGGAGATTAGGAAGAGTCTGTATCCTGAAATGTCTCCGTTACTTAATGAACTGAGTGGAAAGCTGTAAAGAGGTGAAGAAGTAATGTAAAGGAAGTATTTGTACTCGATGTGTCATTCAATTTCATTATCATCAGTCTCCCAACTGAGCTATGAGCTATCCCACATTCTCGATTCGAGGGTTTTGGTGACTCCATAAACAATATATTACTTCAGCAAAATGATAAAATAAAGTTCTCTCCATTCCAGAATCTGAGCCCAATATTCACTAAATTTATACGATGAAATAAAATCATAAAGATCATACTAAAAGAAAGAACTGAGAAGCACAAGAAACTAAACTAACATCATTTATGTACATATTTGCCCAAATGCTGAGAAGTTTGTGCTAGAAGTAGCAAATAGCAGAAACAGACCTTTTAGGAGTTCATATAGCACATCGCTTGTGCTTGAAGATAATAAGAATCCTTGTATTTTCTGCCACTTGCAACAAAAATTCCGCTGTTAATCCAGTCTTCACGATGTATCCAAGCATCCCGCCCAAAATCAAGCACTCCAATAATCTGT ATGTGCACACTTGAGAGGCGTGGTGATCTCTTCATCGTCACCCTCACCGGCGACGACGAGCACTGGATCGGACCACCCTTGATTTCCTCCTTCCTCTCTCTTCTCACCCAAATCAACTCCCAAGCCACTCCCGGTTCCGTTCTGATCACCACCTCCCATGGCCGCTTCTTCTCCAATGGCTTCCACCTTCCCTGGGCTCAATCCGCTGCCTCCAAATCCGCCGCTAAAGACCGCATACTCCACATGGTTCATATCTTCAAGCCTGTCGTCGCCGCCCTTCTCTCTCTCCCCATGCCCACCATCGCCGCTGTCTCCGGCCATGCCGCCGCCGCCGGTTTTGCTCTCGCTCTTAGCCATGATTACGTCCTGATGAGGCGCGATAGAGGCGTGCTCTACATGAGCGAGATTGACTTGGGTTTTACGTTGCCCGATTACTTTGCGGCATTGATGAGGTCGAAGATCGGGTCAGCCTCGGTTCGTCGAGACGTGCTGCTGGCAGGGATGAAGGTGAATGGTGAAACAGCAGTGAAGTTGGGAATCACAGATGCAGCACACGACGGCGGGGAGGCACTGATGGAGGCGGCGGTGGCGATGGGGGAGAAGTTGGCAAAGAGGAAGTGGGAAGGAGAAGCTTACGCGGAGATTAGGAAGAGTCTGTATCCTGAAATGTCTCCGTTACTTAATGAACTGAGTGGAAAGCTGTAAAGAGGTGAAGAAGTAATGTAAAGGAAGTATTTGTACTCGATGTGTCATTCAATTTCATTATCATCAGTCTCCCAACTGAGCTATGAGCTATCCCACATTCTCGATTCGAGGGTTTTGGTGACTCCATAAACAATATATTACTTCAGCAAAATGATAAAATAAAGTTCTCTCCATTCCAGAATCTGAGCCCAATATTCACTAAATTTATACGATGAAATAAAATCATAAAGATCATACTAAAAGAAAGAACTGAGAAGCACAAGAAACTAAACTAACATCATTTATGTACATATTTGCCCAAATGCTGAGAAGTTTGTGCTAGAAGTAGCAAATAGCAGAAACAGACCTTTTAGGAGTTCATATAGCACATCGCTTGTGCTTGAAGATAATAAGAATCCTTGTATTTTCTGCCACTTGCAACAAAAATTCCGCTGTTAATCCAGTCTTCACGATGTATCCAAGCATCCCGCCCAAAATCAAGCACTCCAATAATCTGT ATGTGCACACTTGAGAGGCGTGGTGATCTCTTCATCGTCACCCTCACCGGCGACGACGAGCACTGGATCGGACCACCCTTGATTTCCTCCTTCCTCTCTCTTCTCACCCAAATCAACTCCCAAGCCACTCCCGGTTCCGTTCTGATCACCACCTCCCATGGCCGCTTCTTCTCCAATGGCTTCCACCTTCCCTGGGCTCAATCCGCTGCCTCCAAATCCGCCGCTAAAGACCGCATACTCCACATGGTTCATATCTTCAAGCCTGTCGTCGCCGCCCTTCTCTCTCTCCCCATGCCCACCATCGCCGCTGTCTCCGGCCATGCCGCCGCCGCCGGTTTTGCTCTCGCTCTTAGCCATGATTACGTCCTGATGAGGCGCGATAGAGGCGTGCTCTACATGAGCGAGATTGACTTGGGTTTTACGTTGCCCGATTACTTTGCGGCATTGATGAGGTCGAAGATCGGGTCAGCCTCGGTTCGTCGAGACGTGCTGCTGGCAGGGATGAAGGTGAATGGTGAAACAGCAGTGAAGTTGGGAATCACAGATGCAGCACACGACGGCGGGGAGGCACTGATGGAGGCGGCGGTGGCGATGGGGGAGAAGTTGGCAAAGAGGAAGTGGGAAGGAGAAGCTTACGCGGAGATTAGGAAGAGTCTGTATCCTGAAATGTCTCCGTTACTTAATGAACTGAGTGGAAAGCTGTAA MCTLERRGDLFIVTLTGDDEHWIGPPLISSFLSLLTQINSQATPGSVLITTSHGRFFSNGFHLPWAQSAASKSAAKDRILHMVHIFKPVVAALLSLPMPTIAAVSGHAAAAGFALALSHDYVLMRRDRGVLYMSEIDLGFTLPDYFAALMRSKIGSASVRRDVLLAGMKVNGETAVKLGITDAAHDGGEALMEAAVAMGEKLAKRKWEGEAYAEIRKSLYPEMSPLLNELSGKL
BLAST of Cp4.1LG08g03570 vs. Swiss-Prot
Match: ECI2_ARATH (Enoyl-CoA delta isomerase 2, peroxisomal OS=Arabidopsis thaliana GN=ECI2 PE=1 SV=1) HSP 1 Score: 293.5 bits (750), Expect = 2.0e-78 Identity = 146/228 (64.04%), Postives = 185/228 (81.14%), Query Frame = 1
BLAST of Cp4.1LG08g03570 vs. Swiss-Prot
Match: ECI3_ARATH (Enoyl-CoA delta isomerase 3 OS=Arabidopsis thaliana GN=ECI3 PE=1 SV=1) HSP 1 Score: 282.3 bits (721), Expect = 4.7e-75 Identity = 145/235 (61.70%), Postives = 179/235 (76.17%), Query Frame = 1
BLAST of Cp4.1LG08g03570 vs. Swiss-Prot
Match: ECI1_ARATH (Enoyl-CoA delta isomerase 1, peroxisomal OS=Arabidopsis thaliana GN=ECI1 PE=1 SV=1) HSP 1 Score: 208.0 bits (528), Expect = 1.1e-52 Identity = 113/224 (50.45%), Postives = 152/224 (67.86%), Query Frame = 1
BLAST of Cp4.1LG08g03570 vs. TrEMBL
Match: A0A0A0L4G9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G141810 PE=4 SV=1) HSP 1 Score: 384.4 bits (986), Expect = 9.8e-104 Identity = 192/234 (82.05%), Postives = 211/234 (90.17%), Query Frame = 1
BLAST of Cp4.1LG08g03570 vs. TrEMBL
Match: A0A0A0L8C7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G141780 PE=4 SV=1) HSP 1 Score: 324.3 bits (830), Expect = 1.2e-85 Identity = 162/227 (71.37%), Postives = 191/227 (84.14%), Query Frame = 1
BLAST of Cp4.1LG08g03570 vs. TrEMBL
Match: A0A0A0L9X4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G141770 PE=4 SV=1) HSP 1 Score: 315.1 bits (806), Expect = 7.3e-83 Identity = 154/233 (66.09%), Postives = 192/233 (82.40%), Query Frame = 1
BLAST of Cp4.1LG08g03570 vs. TrEMBL
Match: M5XMU9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010715mg PE=4 SV=1) HSP 1 Score: 308.9 bits (790), Expect = 5.2e-81 Identity = 156/223 (69.96%), Postives = 180/223 (80.72%), Query Frame = 1
BLAST of Cp4.1LG08g03570 vs. TrEMBL
Match: V4MKX3_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10027007mg PE=4 SV=1) HSP 1 Score: 304.7 bits (779), Expect = 9.8e-80 Identity = 152/229 (66.38%), Postives = 185/229 (80.79%), Query Frame = 1
BLAST of Cp4.1LG08g03570 vs. TAIR10
Match: AT4G14430.1 (AT4G14430.1 indole-3-butyric acid response 10) HSP 1 Score: 293.5 bits (750), Expect = 1.1e-79 Identity = 146/228 (64.04%), Postives = 185/228 (81.14%), Query Frame = 1
BLAST of Cp4.1LG08g03570 vs. TAIR10
Match: AT4G14440.1 (AT4G14440.1 3-hydroxyacyl-CoA dehydratase 1) HSP 1 Score: 282.3 bits (721), Expect = 2.6e-76 Identity = 145/235 (61.70%), Postives = 179/235 (76.17%), Query Frame = 1
BLAST of Cp4.1LG08g03570 vs. TAIR10
Match: AT1G65520.1 (AT1G65520.1 delta(3), delta(2)-enoyl CoA isomerase 1) HSP 1 Score: 208.0 bits (528), Expect = 6.3e-54 Identity = 113/224 (50.45%), Postives = 152/224 (67.86%), Query Frame = 1
BLAST of Cp4.1LG08g03570 vs. NCBI nr
Match: gi|659076204|ref|XP_008438556.1| (PREDICTED: enoyl-CoA hydratase domain-containing protein 2, mitochondrial-like [Cucumis melo]) HSP 1 Score: 392.5 bits (1007), Expect = 5.2e-106 Identity = 195/234 (83.33%), Postives = 214/234 (91.45%), Query Frame = 1
BLAST of Cp4.1LG08g03570 vs. NCBI nr
Match: gi|449433263|ref|XP_004134417.1| (PREDICTED: uncharacterized protein LOC101214451 [Cucumis sativus]) HSP 1 Score: 384.4 bits (986), Expect = 1.4e-103 Identity = 192/234 (82.05%), Postives = 211/234 (90.17%), Query Frame = 1
BLAST of Cp4.1LG08g03570 vs. NCBI nr
Match: gi|449432586|ref|XP_004134080.1| (PREDICTED: 3-hydroxybutyryl-CoA dehydratase-like protein, mitochondrial [Cucumis sativus]) HSP 1 Score: 324.3 bits (830), Expect = 1.7e-85 Identity = 162/227 (71.37%), Postives = 191/227 (84.14%), Query Frame = 1
BLAST of Cp4.1LG08g03570 vs. NCBI nr
Match: gi|659076208|ref|XP_008438558.1| (PREDICTED: enoyl-CoA hydratase domain-containing protein 2, mitochondrial-like [Cucumis melo]) HSP 1 Score: 322.4 bits (825), Expect = 6.5e-85 Identity = 160/227 (70.48%), Postives = 191/227 (84.14%), Query Frame = 1
BLAST of Cp4.1LG08g03570 vs. NCBI nr
Match: gi|449432584|ref|XP_004134079.1| (PREDICTED: 3-hydroxybutyryl-CoA dehydratase-like protein, mitochondrial [Cucumis sativus]) HSP 1 Score: 315.1 bits (806), Expect = 1.0e-82 Identity = 154/233 (66.09%), Postives = 192/233 (82.40%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |